HEADER TRANSFERASE 22-MAR-04 1SR2 TITLE SOLUTION STRUCTURE OF THE ESCHERICHIA COLI YOJN HISTIDINE- TITLE 2 PHOSPHOTRANSFERASE (HPT) DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE SENSOR-LIKE HISTIDINE KINASE YOJN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN (RESIDUES 775-890); COMPND 5 EC: 2.7.3.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 STRAIN: XL1 BLUE; SOURCE 5 GENE: YOJN, B2216; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: M15; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE30 KEYWDS FOUR-HELICAL BUNDLE, TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 25 AUTHOR V.V.ROGOV,F.BERNHARD,F.LOEHR,V.DOETSCH REVDAT 3 02-MAR-22 1SR2 1 REMARK REVDAT 2 24-FEB-09 1SR2 1 VERSN REVDAT 1 26-OCT-04 1SR2 0 JRNL AUTH V.V.ROGOV,F.BERNHARD,F.LOEHR,V.DOETSCH JRNL TITL SOLUTION STRUCTURE OF THE ESCHERICHIA COLI YOJN JRNL TITL 2 HISTIDINE-PHOSPHOTRANSFERASE DOMAIN AND ITS INTERACTION WITH JRNL TITL 3 COGNATE PHOSPHORYL RECEIVER DOMAINS JRNL REF J.MOL.BIOL. V. 343 1035 2004 JRNL REFN ISSN 0022-2836 JRNL PMID 15476819 JRNL DOI 10.1016/J.JMB.2004.08.096 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 2.6, CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE REMARK 3 -KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE, REMARK 3 SIMONSON,WARREN (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1SR2 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAR-04. REMARK 100 THE DEPOSITION ID IS D_1000021938. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 295 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 15 MM BIS-TRIS, 15 MM NACL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM YOJN-HPT U-15N, 15 MM BIS REMARK 210 -TRIS, 15 MM NACL, 95% H2O, 5% REMARK 210 D2O; 1 MM YOJN-HPT U-15N,13C, 15 REMARK 210 MM BIS-TRIS, 15 MM NACL, 95% H2O, REMARK 210 5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 700 MHZ REMARK 210 SPECTROMETER MODEL : DMX; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, AURELIA 2.7.5, REMARK 210 DYANA 1.5 REMARK 210 METHOD USED : ENERGY MINIMIZATION REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 25 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: THE 3D_13C-SEPARATED_NOESY WAS RECORDED IN THREE REMARK 210 MODIFICATIONS REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HB ILE A 783 H GLU A 784 1.27 REMARK 500 HG LEU A 782 HG12 ILE A 783 1.31 REMARK 500 HG12 VAL A 779 H LEU A 780 1.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 777 -77.39 -102.34 REMARK 500 1 VAL A 779 -90.58 41.70 REMARK 500 1 ILE A 783 -126.10 -163.39 REMARK 500 1 GLU A 784 -39.78 -142.38 REMARK 500 1 GLN A 786 73.19 62.98 REMARK 500 1 VAL A 792 49.29 -93.76 REMARK 500 1 SER A 795 97.54 59.10 REMARK 500 1 PRO A 796 -144.26 -79.96 REMARK 500 1 ASP A 800 40.34 -165.95 REMARK 500 1 ASP A 816 -81.25 -97.43 REMARK 500 2 GLN A 781 -44.83 173.90 REMARK 500 2 LEU A 782 -83.74 66.17 REMARK 500 2 GLU A 784 -19.45 71.84 REMARK 500 2 VAL A 785 -61.90 -92.04 REMARK 500 2 LEU A 787 -48.12 -168.73 REMARK 500 2 GLU A 790 -174.06 62.95 REMARK 500 2 VAL A 792 -144.46 34.07 REMARK 500 2 GLU A 794 -83.05 64.83 REMARK 500 2 LEU A 797 -131.44 57.61 REMARK 500 2 ASP A 816 -61.68 -92.24 REMARK 500 2 ASN A 852 34.67 70.90 REMARK 500 3 ILE A 783 42.38 -88.46 REMARK 500 3 VAL A 785 -47.76 -147.39 REMARK 500 3 GLN A 786 -114.01 53.80 REMARK 500 3 GLU A 791 -149.60 53.61 REMARK 500 3 SER A 795 118.38 -161.93 REMARK 500 3 ASP A 816 -70.48 -95.13 REMARK 500 3 ASN A 852 39.16 72.91 REMARK 500 4 GLN A 776 -53.85 -141.53 REMARK 500 4 LEU A 780 -101.07 55.43 REMARK 500 4 ILE A 783 -136.04 -157.46 REMARK 500 4 VAL A 785 78.03 -103.87 REMARK 500 4 LEU A 787 -95.24 -176.21 REMARK 500 4 GLN A 789 -109.04 -116.93 REMARK 500 4 VAL A 792 57.80 -90.35 REMARK 500 4 GLU A 794 -137.16 49.04 REMARK 500 4 SER A 795 -55.80 -121.27 REMARK 500 4 ASN A 852 9.48 85.75 REMARK 500 5 GLU A 777 -56.89 170.78 REMARK 500 5 VAL A 779 -71.87 -52.74 REMARK 500 5 LEU A 780 -80.44 -169.52 REMARK 500 5 ILE A 783 -90.51 -149.72 REMARK 500 5 GLU A 784 -69.21 -151.46 REMARK 500 5 LEU A 787 45.79 -100.56 REMARK 500 5 GLU A 791 114.27 -179.17 REMARK 500 5 PRO A 796 45.13 -79.71 REMARK 500 5 LEU A 797 -52.78 70.86 REMARK 500 5 ASP A 816 -63.94 -95.62 REMARK 500 6 ALA A 778 -67.42 -147.39 REMARK 500 6 VAL A 779 -97.76 60.97 REMARK 500 REMARK 500 THIS ENTRY HAS 247 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6133 RELATED DB: BMRB REMARK 900 THE CHEMICAL SHIFT VALUES FOR THE YOJN-HPT PROTEIN DBREF 1SR2 A 775 890 UNP P39838 YOJN_ECOLI 775 890 SEQRES 1 A 116 MET GLN GLU ALA VAL LEU GLN LEU ILE GLU VAL GLN LEU SEQRES 2 A 116 ALA GLN GLU GLU VAL THR GLU SER PRO LEU GLY GLY ASP SEQRES 3 A 116 GLU ASN ALA GLN LEU HIS ALA SER GLY TYR TYR ALA LEU SEQRES 4 A 116 PHE VAL ASP THR VAL PRO ASP ASP VAL LYS ARG LEU TYR SEQRES 5 A 116 THR GLU ALA ALA THR SER ASP PHE ALA ALA LEU ALA GLN SEQRES 6 A 116 THR ALA HIS ARG LEU LYS GLY VAL PHE ALA MET LEU ASN SEQRES 7 A 116 LEU VAL PRO GLY LYS GLN LEU CYS GLU THR LEU GLU HIS SEQRES 8 A 116 LEU ILE ARG GLU LYS ASP VAL PRO GLY ILE GLU LYS TYR SEQRES 9 A 116 ILE SER ASP ILE ASP SER TYR VAL LYS SER LEU LEU HELIX 1 1 ASP A 800 GLY A 809 1 10 HELIX 2 2 TYR A 810 VAL A 815 1 6 HELIX 3 3 THR A 817 SER A 832 1 16 HELIX 4 4 ASP A 833 ASN A 852 1 20 HELIX 5 5 LEU A 853 GLU A 869 1 17 HELIX 6 6 ASP A 871 LEU A 890 1 20 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1