HEADER HYDROLASE (METALLOPROTEASE) 02-NOV-94 1SRP TITLE STRUCTURAL ANALYSIS OF SERRATIA PROTEASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERRALYSIN; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.24.40; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SERRATIA SP.; SOURCE 3 ORGANISM_TAXID: 617; SOURCE 4 STRAIN: E-15 KEYWDS HYDROLASE (METALLOPROTEASE) EXPDTA X-RAY DIFFRACTION AUTHOR K.HAMADA,H.HIRAMATSU,Y.KATSUYA,Y.HATA,Y.KATSUBE REVDAT 4 14-FEB-24 1SRP 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 1SRP 1 VERSN REVDAT 2 24-FEB-09 1SRP 1 VERSN REVDAT 1 14-FEB-95 1SRP 0 JRNL AUTH K.HAMADA,Y.HATA,Y.KATSUYA,H.HIRAMATSU,T.FUJIWARA,Y.KATSUBE JRNL TITL CRYSTAL STRUCTURE OF SERRATIA PROTEASE, A ZINC-DEPENDENT JRNL TITL 2 PROTEINASE FROM SERRATIA SP. E-15, CONTAINING A BETA-SHEET JRNL TITL 3 COIL MOTIF AT 2.0 A RESOLUTION. JRNL REF J.BIOCHEM.(TOKYO) V. 119 844 1996 JRNL REFN ISSN 0021-924X JRNL PMID 8797082 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.HAMADA,H.HIRAMATSU,T.FUJIWARA,Y.KATSUYA,Y.HATA,Y.KATSUBE REMARK 1 TITL STRUCTURAL STUDIES OF SERRATIA PROTEASE BY X-RAY ANALYSIS REMARK 1 REF PHOTON FACTORY ACTIVITY V. 10 125 1992 REMARK 1 REF 2 REPORT REMARK 1 REFN ISSN 0002-9513 REMARK 1 REFERENCE 2 REMARK 1 AUTH Y.KATSUYA,K.HAMADA,Y.HATA,N.TANAKA,M.SATO,Y.KATSUBE, REMARK 1 AUTH 2 K.KATIUCHI,K.MIYATA REMARK 1 TITL PRELIMINARY X-RAY STUDIES ON SERRATIA PROTEASE REMARK 1 REF J.BIOCHEM.(TOKYO) V. 98 1139 1985 REMARK 1 REFN ISSN 0021-924X REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : GPRLSA REMARK 3 AUTHORS : FUREY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 78.6 REMARK 3 NUMBER OF REFLECTIONS : 40458 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : 0.184 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3560 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 212 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.012 ; 0.020 REMARK 3 ANGLE DISTANCE (A) : 0.038 ; 0.040 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : 0.040 ; 0.050 REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.010 ; 0.020 REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.148 ; 0.150 REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : 0.180 ; 0.500 REMARK 3 MULTIPLE TORSION (A) : 0.199 ; 0.500 REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : 0.185 ; 0.500 REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : 1.800 ; 3.000 REMARK 3 STAGGERED (DEGREES) : 16.700; 15.000 REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.687 ; 1.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.116 ; 1.500 REMARK 3 SIDE-CHAIN BOND (A**2) : 0.800 ; 1.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 1.327 ; 1.500 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1SRP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000176486. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42930 REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 54.57000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 21.32000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 75.44500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 21.32000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 54.57000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 75.44500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 624 O HOH A 683 1.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 6 CB - CG - CD1 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG A 18 NE - CZ - NH1 ANGL. DEV. = 4.9 DEGREES REMARK 500 ARG A 41 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ASP A 64 CB - CG - OD2 ANGL. DEV. = -8.8 DEGREES REMARK 500 ASP A 98 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG A 171 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 GLU A 194 CA - CB - CG ANGL. DEV. = 13.8 DEGREES REMARK 500 ARG A 200 CD - NE - CZ ANGL. DEV. = -12.1 DEGREES REMARK 500 ASP A 201 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG A 302 NE - CZ - NH2 ANGL. DEV. = -5.0 DEGREES REMARK 500 GLU A 307 CG - CD - OE2 ANGL. DEV. = -12.8 DEGREES REMARK 500 ASP A 312 CB - CG - OD2 ANGL. DEV. = 7.4 DEGREES REMARK 500 ASP A 365 CB - CG - OD2 ANGL. DEV. = 7.4 DEGREES REMARK 500 ASP A 374 CB - CG - OD1 ANGL. DEV. = -7.1 DEGREES REMARK 500 ASP A 374 CB - CG - OD2 ANGL. DEV. = 9.9 DEGREES REMARK 500 ASP A 421 CB - CG - OD1 ANGL. DEV. = 7.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 20 -131.54 58.96 REMARK 500 ILE A 24 -83.13 -110.07 REMARK 500 ASN A 25 42.76 -85.30 REMARK 500 SER A 121 -12.55 -142.22 REMARK 500 ALA A 192 159.61 -41.90 REMARK 500 GLU A 194 -125.09 -135.83 REMARK 500 ASN A 196 63.30 -118.08 REMARK 500 ASP A 225 106.00 -161.99 REMARK 500 ASN A 343 -164.49 -121.97 REMARK 500 ALA A 388 57.22 -150.41 REMARK 500 ASP A 394 41.14 -149.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 200 0.11 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 920 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 176 NE2 REMARK 620 2 HIS A 180 NE2 96.4 REMARK 620 3 HIS A 186 NE2 116.2 101.2 REMARK 620 4 HOH A 557 O 105.6 103.5 128.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 911 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 253 O REMARK 620 2 GLY A 255 O 94.7 REMARK 620 3 THR A 257 OG1 92.9 77.9 REMARK 620 4 ASP A 285 OD1 79.5 155.1 126.2 REMARK 620 5 ASP A 285 OD2 90.6 153.9 76.3 51.0 REMARK 620 6 GLY A 287 O 84.0 82.0 159.3 73.4 124.1 REMARK 620 7 ASP A 290 OD1 172.9 87.7 81.0 101.0 84.4 103.0 REMARK 620 8 ASP A 290 OD2 142.9 115.0 113.8 64.1 72.6 79.2 39.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 912 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 288 O REMARK 620 2 ASP A 290 OD2 86.4 REMARK 620 3 THR A 327 O 165.3 98.4 REMARK 620 4 GLU A 329 OE1 85.7 88.1 80.6 REMARK 620 5 GLU A 329 OE2 86.9 135.6 79.9 47.7 REMARK 620 6 HOH A 524 O 87.2 144.7 96.4 126.0 78.5 REMARK 620 7 HOH A 550 O 110.2 76.3 84.5 156.6 146.0 73.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 913 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 334 O REMARK 620 2 GLY A 336 O 96.9 REMARK 620 3 ASP A 338 OD2 83.5 89.1 REMARK 620 4 GLY A 351 O 83.2 173.1 84.0 REMARK 620 5 ALA A 353 O 81.1 83.0 161.7 103.8 REMARK 620 6 ASP A 356 OD1 168.9 82.0 85.4 96.6 109.7 REMARK 620 7 ASP A 356 OD2 141.0 114.2 118.2 68.8 80.1 47.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 914 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 343 O REMARK 620 2 ALA A 345 O 89.6 REMARK 620 3 ASN A 347 OD1 82.7 84.2 REMARK 620 4 GLY A 360 O 85.1 166.1 82.4 REMARK 620 5 GLY A 362 O 92.1 87.7 170.4 105.3 REMARK 620 6 ASP A 365 OD2 146.5 119.4 114.6 70.0 74.0 REMARK 620 7 ASP A 365 OD1 167.7 83.2 86.6 99.6 97.6 45.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 915 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 352 O REMARK 620 2 GLY A 354 O 105.6 REMARK 620 3 ASP A 356 OD2 78.2 84.3 REMARK 620 4 GLY A 369 O 78.4 175.5 94.6 REMARK 620 5 ALA A 371 O 88.6 78.7 154.8 103.8 REMARK 620 6 ASP A 374 OD1 159.6 86.2 86.7 89.4 110.3 REMARK 620 7 ASP A 374 OD2 139.7 105.8 129.5 71.6 73.6 46.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 916 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 361 O REMARK 620 2 GLY A 362 O 61.6 REMARK 620 3 GLY A 363 O 116.2 66.2 REMARK 620 4 ASP A 365 OD2 89.8 66.8 101.2 REMARK 620 5 ASP A 383 O 90.2 121.0 86.9 170.9 REMARK 620 6 ASP A 390 OD2 116.0 156.7 126.4 90.5 81.3 REMARK 620 7 ASP A 390 OD1 156.5 139.4 86.5 91.5 84.9 40.5 REMARK 620 8 HOH A 604 O 69.6 123.2 170.0 86.6 84.9 46.5 87.0 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 917 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 370 O REMARK 620 2 GLY A 372 O 109.0 REMARK 620 3 ASP A 374 OD2 76.4 87.7 REMARK 620 4 ASP A 400 OD1 155.5 92.3 93.2 REMARK 620 5 ASP A 400 OD2 121.0 128.1 115.4 43.9 REMARK 620 6 HOH A 527 O 79.0 166.5 83.7 77.9 48.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: CAT REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 911 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 912 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 913 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 914 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 915 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 916 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 917 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 920 DBREF 1SRP A 1 471 UNP P07268 PRZN_SERSP 17 487 SEQADV 1SRP ARG A 200 UNP P07268 ASN 216 CONFLICT SEQADV 1SRP LEU A 250 UNP P07268 PRO 266 CONFLICT SEQADV 1SRP GLN A 412 UNP P07268 ASN 428 CONFLICT SEQADV 1SRP ALA A 426 UNP P07268 THR 442 CONFLICT SEQADV 1SRP ASN A 438 UNP P07268 SER 454 CONFLICT SEQRES 1 A 471 ALA ALA THR THR GLY TYR ASP ALA VAL ASP ASP LEU LEU SEQRES 2 A 471 HIS TYR HIS GLU ARG GLY ASN GLY ILE GLN ILE ASN GLY SEQRES 3 A 471 LYS ASP SER PHE SER ASN GLU GLN ALA GLY LEU PHE ILE SEQRES 4 A 471 THR ARG GLU ASN GLN THR TRP ASN GLY TYR LYS VAL PHE SEQRES 5 A 471 GLY GLN PRO VAL LYS LEU THR PHE SER PHE PRO ASP TYR SEQRES 6 A 471 LYS PHE SER SER THR ASN VAL ALA GLY ASP THR GLY LEU SEQRES 7 A 471 SER LYS PHE SER ALA GLU GLN GLN GLN GLN ALA LYS LEU SEQRES 8 A 471 SER LEU GLN SER TRP ALA ASP VAL ALA ASN ILE THR PHE SEQRES 9 A 471 THR GLU VAL ALA ALA GLY GLN LYS ALA ASN ILE THR PHE SEQRES 10 A 471 GLY ASN TYR SER GLN ASP ARG PRO GLY HIS TYR ASP TYR SEQRES 11 A 471 GLY THR GLN ALA TYR ALA PHE LEU PRO ASN THR ILE TRP SEQRES 12 A 471 GLN GLY GLN ASP LEU GLY GLY GLN THR TRP TYR ASN VAL SEQRES 13 A 471 ASN GLN SER ASN VAL LYS HIS PRO ALA THR GLU ASP TYR SEQRES 14 A 471 GLY ARG GLN THR PHE THR HIS GLU ILE GLY HIS ALA LEU SEQRES 15 A 471 GLY LEU SER HIS PRO GLY ASP TYR ASN ALA GLY GLU GLY SEQRES 16 A 471 ASN PRO THR TYR ARG ASP VAL THR TYR ALA GLU ASP THR SEQRES 17 A 471 ARG GLN PHE SER LEU MET SER TYR TRP SER GLU THR ASN SEQRES 18 A 471 THR GLY GLY ASP ASN GLY GLY HIS TYR ALA ALA ALA PRO SEQRES 19 A 471 LEU LEU ASP ASP ILE ALA ALA ILE GLN HIS LEU TYR GLY SEQRES 20 A 471 ALA ASN LEU SER THR ARG THR GLY ASP THR VAL TYR GLY SEQRES 21 A 471 PHE ASN SER ASN THR GLY ARG ASP PHE LEU SER THR THR SEQRES 22 A 471 SER ASN SER GLN LYS VAL ILE PHE ALA ALA TRP ASP ALA SEQRES 23 A 471 GLY GLY ASN ASP THR PHE ASP PHE SER GLY TYR THR ALA SEQRES 24 A 471 ASN GLN ARG ILE ASN LEU ASN GLU LYS SER PHE SER ASP SEQRES 25 A 471 VAL GLY GLY LEU LYS GLY ASN VAL SER ILE ALA ALA GLY SEQRES 26 A 471 VAL THR ILE GLU ASN ALA ILE GLY GLY SER GLY ASN ASP SEQRES 27 A 471 VAL ILE VAL GLY ASN ALA ALA ASN ASN VAL LEU LYS GLY SEQRES 28 A 471 GLY ALA GLY ASN ASP VAL LEU PHE GLY GLY GLY GLY ALA SEQRES 29 A 471 ASP GLU LEU TRP GLY GLY ALA GLY LYS ASP ILE PHE VAL SEQRES 30 A 471 PHE SER ALA ALA SER ASP SER ALA PRO GLY ALA SER ASP SEQRES 31 A 471 TRP ILE ARG ASP PHE GLN LYS GLY ILE ASP LYS ILE ASP SEQRES 32 A 471 LEU SER PHE PHE ASN LYS GLU ALA GLN SER SER ASP PHE SEQRES 33 A 471 ILE HIS PHE VAL ASP HIS PHE SER GLY ALA ALA GLY GLU SEQRES 34 A 471 ALA LEU LEU SER TYR ASN ALA SER ASN ASN VAL THR ASP SEQRES 35 A 471 LEU SER VAL ASN ILE GLY GLY HIS GLN ALA PRO ASP PHE SEQRES 36 A 471 LEU VAL LYS ILE VAL GLY GLN VAL ASP VAL ALA THR ASP SEQRES 37 A 471 PHE ILE VAL HET CA A 911 1 HET CA A 912 1 HET CA A 913 1 HET CA A 914 1 HET CA A 915 1 HET CA A 916 1 HET CA A 917 1 HET ZN A 920 1 HETNAM CA CALCIUM ION HETNAM ZN ZINC ION FORMUL 2 CA 7(CA 2+) FORMUL 9 ZN ZN 2+ FORMUL 10 HOH *212(H2 O) HELIX 1 H1 GLY A 5 LEU A 13 1 9 HELIX 2 H2 ASN A 32 ILE A 39 1 8 HELIX 3 H3 ALA A 83 VAL A 99 1 17 HELIX 4 H4 SER A 159 LYS A 162 1 4 HELIX 5 H5 ASP A 168 LEU A 182 1 15 HELIX 6 H6 LEU A 236 TYR A 246 1 11 HELIX 7 H7 SER A 405 ALA A 411 1 7 SHEET 1 S1 5 ILE A 102 GLU A 106 0 SHEET 2 S1 5 VAL A 56 SER A 61 1 SHEET 3 S1 5 ILE A 115 TYR A 120 1 SHEET 4 S1 5 GLN A 151 ASN A 155 1 SHEET 5 S1 5 ALA A 134 ALA A 136 -1 SHEET 1 S210 VAL A 258 PHE A 261 0 SHEET 2 S210 THR A 291 ASP A 293 1 SHEET 3 S210 ASN A 330 ILE A 332 1 SHEET 4 S210 VAL A 348 LYS A 350 1 SHEET 5 S210 GLU A 366 TRP A 368 1 SHEET 6 S210 ASP A 390 ILE A 392 1 SHEET 7 S210 PHE A 455 VAL A 460 1 SHEET 8 S210 VAL A 440 VAL A 445 -1 SHEET 9 S210 GLU A 429 ASN A 435 1 SHEET 10 S210 HIS A 418 PHE A 419 1 SHEET 1 S3 9 PHE A 281 ALA A 283 0 SHEET 2 S3 9 VAL A 320 ILE A 322 1 SHEET 3 S3 9 PHE A 310 ASP A 312 -1 SHEET 4 S3 9 ARG A 302 ASN A 304 1 SHEET 5 S3 9 VAL A 339 VAL A 341 1 SHEET 6 S3 9 VAL A 357 PHE A 359 1 SHEET 7 S3 9 ILE A 375 VAL A 377 1 SHEET 8 S3 9 LYS A 401 ASP A 403 1 SHEET 9 S3 9 PHE A 469 ILE A 470 1 LINK NE2 HIS A 176 ZN ZN A 920 1555 1555 2.04 LINK NE2 HIS A 180 ZN ZN A 920 1555 1555 2.12 LINK NE2 HIS A 186 ZN ZN A 920 1555 1555 1.95 LINK O ARG A 253 CA CA A 911 1555 1555 2.28 LINK O GLY A 255 CA CA A 911 1555 1555 2.46 LINK OG1 THR A 257 CA CA A 911 1555 1555 2.53 LINK OD1 ASP A 285 CA CA A 911 1555 1555 2.48 LINK OD2 ASP A 285 CA CA A 911 1555 1555 2.60 LINK O GLY A 287 CA CA A 911 1555 1555 2.38 LINK O GLY A 288 CA CA A 912 1555 1555 2.49 LINK OD1 ASP A 290 CA CA A 911 1555 1555 2.31 LINK OD2 ASP A 290 CA CA A 911 1555 1555 3.29 LINK OD2 ASP A 290 CA CA A 912 1555 1555 2.47 LINK O THR A 327 CA CA A 912 1555 1555 2.52 LINK OE1 GLU A 329 CA CA A 912 1555 1555 2.55 LINK OE2 GLU A 329 CA CA A 912 1555 1555 2.74 LINK O GLY A 334 CA CA A 913 1555 1555 2.28 LINK O GLY A 336 CA CA A 913 1555 1555 2.53 LINK OD2 ASP A 338 CA CA A 913 1555 1555 2.62 LINK O ASN A 343 CA CA A 914 1555 1555 2.43 LINK O ALA A 345 CA CA A 914 1555 1555 2.51 LINK OD1 ASN A 347 CA CA A 914 1555 1555 2.53 LINK O GLY A 351 CA CA A 913 1555 1555 2.51 LINK O GLY A 352 CA CA A 915 1555 1555 2.39 LINK O ALA A 353 CA CA A 913 1555 1555 2.40 LINK O GLY A 354 CA CA A 915 1555 1555 2.62 LINK OD1 ASP A 356 CA CA A 913 1555 1555 2.38 LINK OD2 ASP A 356 CA CA A 913 1555 1555 2.92 LINK OD2 ASP A 356 CA CA A 915 1555 1555 2.41 LINK O GLY A 360 CA CA A 914 1555 1555 2.49 LINK O GLY A 361 CA CA A 916 1555 1555 2.51 LINK O GLY A 362 CA CA A 914 1555 1555 2.39 LINK O GLY A 362 CA CA A 916 1555 1555 3.37 LINK O GLY A 363 CA CA A 916 1555 1555 2.51 LINK OD2 ASP A 365 CA CA A 914 1555 1555 2.90 LINK OD1 ASP A 365 CA CA A 914 1555 1555 2.63 LINK OD2 ASP A 365 CA CA A 916 1555 1555 2.19 LINK O GLY A 369 CA CA A 915 1555 1555 2.50 LINK O GLY A 370 CA CA A 917 1555 1555 3.22 LINK O ALA A 371 CA CA A 915 1555 1555 2.32 LINK O GLY A 372 CA CA A 917 1555 1555 2.65 LINK OD1 ASP A 374 CA CA A 915 1555 1555 2.59 LINK OD2 ASP A 374 CA CA A 915 1555 1555 2.88 LINK OD2 ASP A 374 CA CA A 917 1555 1555 2.52 LINK O ASP A 383 CA CA A 916 1555 1555 2.25 LINK OD2 ASP A 390 CA CA A 916 1555 1555 3.36 LINK OD1 ASP A 390 CA CA A 916 1555 1555 2.51 LINK OD1 ASP A 400 CA CA A 917 1555 1555 2.60 LINK OD2 ASP A 400 CA CA A 917 1555 1555 3.17 LINK O HOH A 524 CA CA A 912 1555 1555 2.67 LINK O HOH A 527 CA CA A 917 1555 1555 3.18 LINK O HOH A 550 CA CA A 912 1555 1555 2.55 LINK O HOH A 557 ZN ZN A 920 1555 1555 2.10 LINK O HOH A 604 CA CA A 916 1555 1555 2.72 SITE 1 CAT 4 HIS A 176 HIS A 180 HIS A 186 TYR A 216 SITE 1 AC1 6 ARG A 253 GLY A 255 THR A 257 ASP A 285 SITE 2 AC1 6 GLY A 287 ASP A 290 SITE 1 AC2 6 GLY A 288 ASP A 290 THR A 327 GLU A 329 SITE 2 AC2 6 HOH A 524 HOH A 550 SITE 1 AC3 6 GLY A 334 GLY A 336 ASP A 338 GLY A 351 SITE 2 AC3 6 ALA A 353 ASP A 356 SITE 1 AC4 6 ASN A 343 ALA A 345 ASN A 347 GLY A 360 SITE 2 AC4 6 GLY A 362 ASP A 365 SITE 1 AC5 6 GLY A 352 GLY A 354 ASP A 356 GLY A 369 SITE 2 AC5 6 ALA A 371 ASP A 374 SITE 1 AC6 7 GLY A 361 GLY A 362 GLY A 363 ASP A 365 SITE 2 AC6 7 ASP A 383 ASP A 390 HOH A 604 SITE 1 AC7 4 GLY A 370 GLY A 372 ASP A 374 ASP A 400 SITE 1 AC8 5 HIS A 176 HIS A 180 HIS A 186 TYR A 216 SITE 2 AC8 5 HOH A 557 CRYST1 109.140 150.890 42.640 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009163 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006627 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023452 0.00000