data_1SRS # _entry.id 1SRS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1SRS pdb_00001srs 10.2210/pdb1srs/pdb RCSB PDT021 ? ? WWPDB D_1000176488 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1995-07-28 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_dist_value' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 6 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 7 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 9 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 10 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 11 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 12 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1SRS _pdbx_database_status.recvd_initial_deposition_date 1995-07-28 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pellegrini, L.' 1 'Tan, S.' 2 'Richmond, T.J.' 3 # _citation.id primary _citation.title 'Structure of serum response factor core bound to DNA.' _citation.journal_abbrev Nature _citation.journal_volume 376 _citation.page_first 490 _citation.page_last 498 _citation.year 1995 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 7637780 _citation.pdbx_database_id_DOI 10.1038/376490a0 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pellegrini, L.' 1 ? primary 'Tan, S.' 2 ? primary 'Richmond, T.J.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*CP*(5IU)P*TP*CP*CP*TP*AP*AP*TP*TP*AP*GP*GP*CP*CP*AP*TP*G)-3') ; 5867.605 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*CP*CP*AP*TP*GP*GP*CP*CP*TP*AP*AP*TP*TP*AP*GP*GP*A P*AP*G)-3') ; 5853.812 1 ? ? ? ? 3 polymer man 'PROTEIN (SERUM RESPONSE FACTOR (SRF))' 10300.120 2 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DC)(DC)(5IU)(DT)(DC)(DC)(DT)(DA)(DA)(DT)(DT)(DA)(DG)(DG)(DC)(DC)(DA)(DT)(DG)' CCUTCCTAATTAGGCCATG W ? 2 polydeoxyribonucleotide no no '(DC)(DC)(DA)(DT)(DG)(DG)(DC)(DC)(DT)(DA)(DA)(DT)(DT)(DA)(DG)(DG)(DA)(DA)(DG)' CCATGGCCTAATTAGGAAG C ? 3 'polypeptide(L)' no no ;SGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETG KALIQTCLNSPD ; ;SGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETG KALIQTCLNSPD ; A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 5IU n 1 4 DT n 1 5 DC n 1 6 DC n 1 7 DT n 1 8 DA n 1 9 DA n 1 10 DT n 1 11 DT n 1 12 DA n 1 13 DG n 1 14 DG n 1 15 DC n 1 16 DC n 1 17 DA n 1 18 DT n 1 19 DG n 2 1 DC n 2 2 DC n 2 3 DA n 2 4 DT n 2 5 DG n 2 6 DG n 2 7 DC n 2 8 DC n 2 9 DT n 2 10 DA n 2 11 DA n 2 12 DT n 2 13 DT n 2 14 DA n 2 15 DG n 2 16 DG n 2 17 DA n 2 18 DA n 2 19 DG n 3 1 SER n 3 2 GLY n 3 3 ALA n 3 4 LYS n 3 5 PRO n 3 6 GLY n 3 7 LYS n 3 8 LYS n 3 9 THR n 3 10 ARG n 3 11 GLY n 3 12 ARG n 3 13 VAL n 3 14 LYS n 3 15 ILE n 3 16 LYS n 3 17 MET n 3 18 GLU n 3 19 PHE n 3 20 ILE n 3 21 ASP n 3 22 ASN n 3 23 LYS n 3 24 LEU n 3 25 ARG n 3 26 ARG n 3 27 TYR n 3 28 THR n 3 29 THR n 3 30 PHE n 3 31 SER n 3 32 LYS n 3 33 ARG n 3 34 LYS n 3 35 THR n 3 36 GLY n 3 37 ILE n 3 38 MET n 3 39 LYS n 3 40 LYS n 3 41 ALA n 3 42 TYR n 3 43 GLU n 3 44 LEU n 3 45 SER n 3 46 THR n 3 47 LEU n 3 48 THR n 3 49 GLY n 3 50 THR n 3 51 GLN n 3 52 VAL n 3 53 LEU n 3 54 LEU n 3 55 LEU n 3 56 VAL n 3 57 ALA n 3 58 SER n 3 59 GLU n 3 60 THR n 3 61 GLY n 3 62 HIS n 3 63 VAL n 3 64 TYR n 3 65 THR n 3 66 PHE n 3 67 ALA n 3 68 THR n 3 69 ARG n 3 70 LYS n 3 71 LEU n 3 72 GLN n 3 73 PRO n 3 74 MET n 3 75 ILE n 3 76 THR n 3 77 SER n 3 78 GLU n 3 79 THR n 3 80 GLY n 3 81 LYS n 3 82 ALA n 3 83 LEU n 3 84 ILE n 3 85 GLN n 3 86 THR n 3 87 CYS n 3 88 LEU n 3 89 ASN n 3 90 SER n 3 91 PRO n 3 92 ASP n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'SRF CORE (RESIDUES 132-223)' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene 'SRF CORE (RESIDUES 132-223)' _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET3A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5IU 'DNA linking' n "5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 I N2 O8 P' 434.078 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 -9 -9 DC C W . n A 1 2 DC 2 -8 -8 DC C W . n A 1 3 5IU 3 -7 -7 5IU +U W . n A 1 4 DT 4 -6 -6 DT T W . n A 1 5 DC 5 -5 -5 DC C W . n A 1 6 DC 6 -4 -4 DC C W . n A 1 7 DT 7 -3 -3 DT T W . n A 1 8 DA 8 -2 -2 DA A W . n A 1 9 DA 9 -1 -1 DA A W . n A 1 10 DT 10 1 1 DT T W . n A 1 11 DT 11 2 2 DT T W . n A 1 12 DA 12 3 3 DA A W . n A 1 13 DG 13 4 4 DG G W . n A 1 14 DG 14 5 5 DG G W . n A 1 15 DC 15 6 6 DC C W . n A 1 16 DC 16 7 7 DC C W . n A 1 17 DA 17 8 8 DA A W . n A 1 18 DT 18 9 9 DT T W . n A 1 19 DG 19 10 10 DG G W . n B 2 1 DC 1 11 11 DC C C . n B 2 2 DC 2 10 10 DC C C . n B 2 3 DA 3 9 9 DA A C . n B 2 4 DT 4 8 8 DT T C . n B 2 5 DG 5 7 7 DG G C . n B 2 6 DG 6 6 6 DG G C . n B 2 7 DC 7 5 5 DC C C . n B 2 8 DC 8 4 4 DC C C . n B 2 9 DT 9 3 3 DT T C . n B 2 10 DA 10 2 2 DA A C . n B 2 11 DA 11 1 1 DA A C . n B 2 12 DT 12 -1 -1 DT T C . n B 2 13 DT 13 -2 -2 DT T C . n B 2 14 DA 14 -3 -3 DA A C . n B 2 15 DG 15 -4 -4 DG G C . n B 2 16 DG 16 -5 -5 DG G C . n B 2 17 DA 17 -6 -6 DA A C . n B 2 18 DA 18 -7 -7 DA A C . n B 2 19 DG 19 -8 -8 DG G C . n C 3 1 SER 1 132 ? ? ? A . n C 3 2 GLY 2 133 ? ? ? A . n C 3 3 ALA 3 134 ? ? ? A . n C 3 4 LYS 4 135 ? ? ? A . n C 3 5 PRO 5 136 ? ? ? A . n C 3 6 GLY 6 137 ? ? ? A . n C 3 7 LYS 7 138 ? ? ? A . n C 3 8 LYS 8 139 ? ? ? A . n C 3 9 THR 9 140 140 THR THR A . n C 3 10 ARG 10 141 141 ARG ARG A . n C 3 11 GLY 11 142 142 GLY GLY A . n C 3 12 ARG 12 143 143 ARG ARG A . n C 3 13 VAL 13 144 144 VAL VAL A . n C 3 14 LYS 14 145 145 LYS LYS A . n C 3 15 ILE 15 146 146 ILE ILE A . n C 3 16 LYS 16 147 147 LYS LYS A . n C 3 17 MET 17 148 148 MET MET A . n C 3 18 GLU 18 149 149 GLU GLU A . n C 3 19 PHE 19 150 150 PHE PHE A . n C 3 20 ILE 20 151 151 ILE ILE A . n C 3 21 ASP 21 152 152 ASP ASP A . n C 3 22 ASN 22 153 153 ASN ASN A . n C 3 23 LYS 23 154 154 LYS LYS A . n C 3 24 LEU 24 155 155 LEU LEU A . n C 3 25 ARG 25 156 156 ARG ARG A . n C 3 26 ARG 26 157 157 ARG ARG A . n C 3 27 TYR 27 158 158 TYR TYR A . n C 3 28 THR 28 159 159 THR THR A . n C 3 29 THR 29 160 160 THR THR A . n C 3 30 PHE 30 161 161 PHE PHE A . n C 3 31 SER 31 162 162 SER SER A . n C 3 32 LYS 32 163 163 LYS LYS A . n C 3 33 ARG 33 164 164 ARG ARG A . n C 3 34 LYS 34 165 165 LYS LYS A . n C 3 35 THR 35 166 166 THR THR A . n C 3 36 GLY 36 167 167 GLY GLY A . n C 3 37 ILE 37 168 168 ILE ILE A . n C 3 38 MET 38 169 169 MET MET A . n C 3 39 LYS 39 170 170 LYS LYS A . n C 3 40 LYS 40 171 171 LYS LYS A . n C 3 41 ALA 41 172 172 ALA ALA A . n C 3 42 TYR 42 173 173 TYR TYR A . n C 3 43 GLU 43 174 174 GLU GLU A . n C 3 44 LEU 44 175 175 LEU LEU A . n C 3 45 SER 45 176 176 SER SER A . n C 3 46 THR 46 177 177 THR THR A . n C 3 47 LEU 47 178 178 LEU LEU A . n C 3 48 THR 48 179 179 THR THR A . n C 3 49 GLY 49 180 180 GLY GLY A . n C 3 50 THR 50 181 181 THR THR A . n C 3 51 GLN 51 182 182 GLN GLN A . n C 3 52 VAL 52 183 183 VAL VAL A . n C 3 53 LEU 53 184 184 LEU LEU A . n C 3 54 LEU 54 185 185 LEU LEU A . n C 3 55 LEU 55 186 186 LEU LEU A . n C 3 56 VAL 56 187 187 VAL VAL A . n C 3 57 ALA 57 188 188 ALA ALA A . n C 3 58 SER 58 189 189 SER SER A . n C 3 59 GLU 59 190 190 GLU GLU A . n C 3 60 THR 60 191 191 THR THR A . n C 3 61 GLY 61 192 192 GLY GLY A . n C 3 62 HIS 62 193 193 HIS HIS A . n C 3 63 VAL 63 194 194 VAL VAL A . n C 3 64 TYR 64 195 195 TYR TYR A . n C 3 65 THR 65 196 196 THR THR A . n C 3 66 PHE 66 197 197 PHE PHE A . n C 3 67 ALA 67 198 198 ALA ALA A . n C 3 68 THR 68 199 199 THR THR A . n C 3 69 ARG 69 200 200 ARG ARG A . n C 3 70 LYS 70 201 201 LYS LYS A . n C 3 71 LEU 71 202 202 LEU LEU A . n C 3 72 GLN 72 203 203 GLN GLN A . n C 3 73 PRO 73 204 204 PRO PRO A . n C 3 74 MET 74 205 205 MET MET A . n C 3 75 ILE 75 206 206 ILE ILE A . n C 3 76 THR 76 207 207 THR THR A . n C 3 77 SER 77 208 208 SER SER A . n C 3 78 GLU 78 209 209 GLU GLU A . n C 3 79 THR 79 210 210 THR THR A . n C 3 80 GLY 80 211 211 GLY GLY A . n C 3 81 LYS 81 212 212 LYS LYS A . n C 3 82 ALA 82 213 213 ALA ALA A . n C 3 83 LEU 83 214 214 LEU LEU A . n C 3 84 ILE 84 215 215 ILE ILE A . n C 3 85 GLN 85 216 216 GLN GLN A . n C 3 86 THR 86 217 217 THR THR A . n C 3 87 CYS 87 218 218 CYS CYS A . n C 3 88 LEU 88 219 219 LEU LEU A . n C 3 89 ASN 89 220 220 ASN ASN A . n C 3 90 SER 90 221 221 SER SER A . n C 3 91 PRO 91 222 222 PRO PRO A . n C 3 92 ASP 92 223 223 ASP ASP A . n D 3 1 SER 1 132 ? ? ? B . n D 3 2 GLY 2 133 ? ? ? B . n D 3 3 ALA 3 134 ? ? ? B . n D 3 4 LYS 4 135 ? ? ? B . n D 3 5 PRO 5 136 ? ? ? B . n D 3 6 GLY 6 137 ? ? ? B . n D 3 7 LYS 7 138 ? ? ? B . n D 3 8 LYS 8 139 ? ? ? B . n D 3 9 THR 9 140 140 THR THR B . n D 3 10 ARG 10 141 141 ARG ARG B . n D 3 11 GLY 11 142 142 GLY GLY B . n D 3 12 ARG 12 143 143 ARG ARG B . n D 3 13 VAL 13 144 144 VAL VAL B . n D 3 14 LYS 14 145 145 LYS LYS B . n D 3 15 ILE 15 146 146 ILE ILE B . n D 3 16 LYS 16 147 147 LYS LYS B . n D 3 17 MET 17 148 148 MET MET B . n D 3 18 GLU 18 149 149 GLU GLU B . n D 3 19 PHE 19 150 150 PHE PHE B . n D 3 20 ILE 20 151 151 ILE ILE B . n D 3 21 ASP 21 152 152 ASP ASP B . n D 3 22 ASN 22 153 153 ASN ASN B . n D 3 23 LYS 23 154 154 LYS LYS B . n D 3 24 LEU 24 155 155 LEU LEU B . n D 3 25 ARG 25 156 156 ARG ARG B . n D 3 26 ARG 26 157 157 ARG ARG B . n D 3 27 TYR 27 158 158 TYR TYR B . n D 3 28 THR 28 159 159 THR THR B . n D 3 29 THR 29 160 160 THR THR B . n D 3 30 PHE 30 161 161 PHE PHE B . n D 3 31 SER 31 162 162 SER SER B . n D 3 32 LYS 32 163 163 LYS LYS B . n D 3 33 ARG 33 164 164 ARG ARG B . n D 3 34 LYS 34 165 165 LYS LYS B . n D 3 35 THR 35 166 166 THR THR B . n D 3 36 GLY 36 167 167 GLY GLY B . n D 3 37 ILE 37 168 168 ILE ILE B . n D 3 38 MET 38 169 169 MET MET B . n D 3 39 LYS 39 170 170 LYS LYS B . n D 3 40 LYS 40 171 171 LYS LYS B . n D 3 41 ALA 41 172 172 ALA ALA B . n D 3 42 TYR 42 173 173 TYR TYR B . n D 3 43 GLU 43 174 174 GLU GLU B . n D 3 44 LEU 44 175 175 LEU LEU B . n D 3 45 SER 45 176 176 SER SER B . n D 3 46 THR 46 177 177 THR THR B . n D 3 47 LEU 47 178 178 LEU LEU B . n D 3 48 THR 48 179 179 THR THR B . n D 3 49 GLY 49 180 180 GLY GLY B . n D 3 50 THR 50 181 181 THR THR B . n D 3 51 GLN 51 182 182 GLN GLN B . n D 3 52 VAL 52 183 183 VAL VAL B . n D 3 53 LEU 53 184 184 LEU LEU B . n D 3 54 LEU 54 185 185 LEU LEU B . n D 3 55 LEU 55 186 186 LEU LEU B . n D 3 56 VAL 56 187 187 VAL VAL B . n D 3 57 ALA 57 188 188 ALA ALA B . n D 3 58 SER 58 189 189 SER SER B . n D 3 59 GLU 59 190 190 GLU GLU B . n D 3 60 THR 60 191 191 THR THR B . n D 3 61 GLY 61 192 192 GLY GLY B . n D 3 62 HIS 62 193 193 HIS HIS B . n D 3 63 VAL 63 194 194 VAL VAL B . n D 3 64 TYR 64 195 195 TYR TYR B . n D 3 65 THR 65 196 196 THR THR B . n D 3 66 PHE 66 197 197 PHE PHE B . n D 3 67 ALA 67 198 198 ALA ALA B . n D 3 68 THR 68 199 199 THR THR B . n D 3 69 ARG 69 200 200 ARG ARG B . n D 3 70 LYS 70 201 201 LYS LYS B . n D 3 71 LEU 71 202 202 LEU LEU B . n D 3 72 GLN 72 203 203 GLN GLN B . n D 3 73 PRO 73 204 204 PRO PRO B . n D 3 74 MET 74 205 205 MET MET B . n D 3 75 ILE 75 206 206 ILE ILE B . n D 3 76 THR 76 207 207 THR THR B . n D 3 77 SER 77 208 208 SER SER B . n D 3 78 GLU 78 209 209 GLU GLU B . n D 3 79 THR 79 210 210 THR THR B . n D 3 80 GLY 80 211 211 GLY GLY B . n D 3 81 LYS 81 212 212 LYS LYS B . n D 3 82 ALA 82 213 213 ALA ALA B . n D 3 83 LEU 83 214 214 LEU LEU B . n D 3 84 ILE 84 215 215 ILE ILE B . n D 3 85 GLN 85 216 216 GLN GLN B . n D 3 86 THR 86 217 217 THR THR B . n D 3 87 CYS 87 218 218 CYS CYS B . n D 3 88 LEU 88 219 219 LEU LEU B . n D 3 89 ASN 89 220 ? ? ? B . n D 3 90 SER 90 221 ? ? ? B . n D 3 91 PRO 91 222 ? ? ? B . n D 3 92 ASP 92 223 ? ? ? B . n # _software.name X-PLOR _software.classification refinement _software.version 3.1 _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1SRS _cell.length_a 106.840 _cell.length_b 106.840 _cell.length_c 76.880 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SRS _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # _exptl.entry_id 1SRS _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 63.37 _exptl_crystal.density_Matthews 3.36 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293.00 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.50 _exptl_crystal_grow.pdbx_details 'pH 6.50, VAPOR DIFFUSION, HANGING DROP, temperature 293.00K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 'PEG 6000' ? ? ? 1 3 1 'NH4 CITRATE' ? ? ? 1 4 1 BIS-TRIS-PROPANE ? ? ? 1 5 1 MGCL2 ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 277.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1SRS _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 25.000 _reflns.d_resolution_high 3.200 _reflns.number_obs 7629 _reflns.number_all ? _reflns.percent_possible_obs 98.000 _reflns.pdbx_Rmerge_I_obs 0.106 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.700 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1SRS _refine.ls_number_reflns_obs 7162 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.000 _refine.ls_d_res_high 3.200 _refine.ls_percent_reflns_obs 96.000 _refine.ls_R_factor_obs 0.228 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.228 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1304 _refine_hist.pdbx_number_atoms_nucleic_acid 769 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2074 _refine_hist.d_res_high 3.200 _refine_hist.d_res_low 10.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 0.90 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 35.7 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 0.87 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? 1.000 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? 1.500 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? 1.500 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? 2.000 ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1SRS _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1SRS _struct.title 'SERUM RESPONSE FACTOR (SRF) CORE COMPLEXED WITH SPECIFIC SRE DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1SRS _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'TRANSCRIPTION REGULATION, MADS-DOMAIN, COMPLEX (DNA BINDING PROTEIN-DNA), TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP SRF_HUMAN 3 ? ? P11831 ? 2 PDB 1SRS 1 ? ? 1SRS ? 3 PDB 1SRS 2 ? ? 1SRS ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1SRS A 1 ? 92 ? P11831 87 ? 178 ? 132 223 2 1 1SRS B 1 ? 92 ? P11831 87 ? 178 ? 132 223 3 2 1SRS W 1 ? 19 ? 1SRS -9 ? 10 ? -9 10 4 3 1SRS C 1 ? 19 ? 1SRS 11 ? -8 ? 11 -8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ;THERE IS ONE COMPLEX PER ASYMMETRIC UNIT CONSISTING OF TWO IDENTICAL POLYPEPTIDE CHAINS LABELLED *A* AND *B* AND TWO DNA CHAINS LABELLED *W* AND *C*. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN C 22 ? THR C 48 ? ASN A 153 THR A 179 1 ? 27 HELX_P HELX_P2 2 GLU C 78 ? LEU C 88 ? GLU A 209 LEU A 219 1 ? 11 HELX_P HELX_P3 3 ASN D 22 ? THR D 48 ? ASN B 153 THR B 179 1 ? 27 HELX_P HELX_P4 4 GLU D 78 ? LEU D 88 ? GLU B 209 LEU B 219 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DC 2 "O3'" ? ? ? 1_555 A 5IU 3 P ? ? W DC -8 W 5IU -7 1_555 ? ? ? ? ? ? ? 1.597 ? ? covale2 covale both ? A 5IU 3 "O3'" ? ? ? 1_555 A DT 4 P ? ? W 5IU -7 W DT -6 1_555 ? ? ? ? ? ? ? 1.601 ? ? hydrog1 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 19 N1 ? ? W DC -8 C DG -8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 19 O6 ? ? W DC -8 C DG -8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 19 N2 ? ? W DC -8 C DG -8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A 5IU 3 N3 ? ? ? 1_555 B DA 18 N1 ? ? W 5IU -7 C DA -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A 5IU 3 O4 ? ? ? 1_555 B DA 18 N6 ? ? W 5IU -7 C DA -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 17 N1 ? ? W DT -6 C DA -6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 17 N6 ? ? W DT -6 C DA -6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 16 N1 ? ? W DC -5 C DG -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 16 O6 ? ? W DC -5 C DG -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 16 N2 ? ? W DC -5 C DG -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 15 N1 ? ? W DC -4 C DG -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 15 O6 ? ? W DC -4 C DG -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 15 N2 ? ? W DC -4 C DG -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 14 N1 ? ? W DT -3 C DA -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 14 N6 ? ? W DT -3 C DA -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 13 N3 ? ? W DA -2 C DT -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 13 O4 ? ? W DA -2 C DT -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 9 N1 ? ? ? 1_555 B DT 12 N3 ? ? W DA -1 C DT -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 9 N6 ? ? ? 1_555 B DT 12 O4 ? ? W DA -1 C DT -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 11 N1 ? ? W DT 1 C DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 11 N6 ? ? W DT 1 C DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 11 N3 ? ? ? 1_555 B DA 10 N1 ? ? W DT 2 C DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 11 O4 ? ? ? 1_555 B DA 10 N6 ? ? W DT 2 C DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 12 N1 ? ? ? 1_555 B DT 9 N3 ? ? W DA 3 C DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 12 N6 ? ? ? 1_555 B DT 9 O4 ? ? W DA 3 C DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 13 N1 ? ? ? 1_555 B DC 8 N3 ? ? W DG 4 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 13 N2 ? ? ? 1_555 B DC 8 O2 ? ? W DG 4 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 13 O6 ? ? ? 1_555 B DC 8 N4 ? ? W DG 4 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B DC 7 N3 ? ? W DG 5 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 14 N2 ? ? ? 1_555 B DC 7 O2 ? ? W DG 5 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B DC 7 N4 ? ? W DG 5 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DC 15 N3 ? ? ? 1_555 B DG 6 N1 ? ? W DC 6 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DC 15 N4 ? ? ? 1_555 B DG 6 O6 ? ? W DC 6 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 15 O2 ? ? ? 1_555 B DG 6 N2 ? ? W DC 6 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 16 N3 ? ? ? 1_555 B DG 5 N1 ? ? W DC 7 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 16 N4 ? ? ? 1_555 B DG 5 O6 ? ? W DC 7 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 16 O2 ? ? ? 1_555 B DG 5 N2 ? ? W DC 7 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DA 17 N1 ? ? ? 1_555 B DT 4 N3 ? ? W DA 8 C DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DA 17 N6 ? ? ? 1_555 B DT 4 O4 ? ? W DA 8 C DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DT 18 N3 ? ? ? 1_555 B DA 3 N1 ? ? W DT 9 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DT 18 O4 ? ? ? 1_555 B DA 3 N6 ? ? W DT 9 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DG 19 N1 ? ? ? 1_555 B DC 2 N3 ? ? W DG 10 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DG 19 N2 ? ? ? 1_555 B DC 2 O2 ? ? W DG 10 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DG 19 O6 ? ? ? 1_555 B DC 2 N4 ? ? W DG 10 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL C 63 ? ALA C 67 ? VAL A 194 ALA A 198 A 2 GLN C 51 ? ALA C 57 ? GLN A 182 ALA A 188 A 3 GLN D 51 ? ALA D 57 ? GLN B 182 ALA B 188 A 4 VAL D 63 ? ALA D 67 ? VAL B 194 ALA B 198 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR C 64 ? O TYR A 195 N VAL C 56 ? N VAL A 187 A 2 3 O GLN C 51 ? O GLN A 182 N ALA D 57 ? N ALA B 188 A 3 4 O LEU D 54 ? O LEU B 185 N PHE D 66 ? N PHE B 197 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 148 ? ? -60.10 96.83 2 1 LYS B 145 ? ? -69.47 97.65 3 1 MET B 148 ? ? -61.66 95.47 4 1 ARG B 200 ? ? -32.85 -70.53 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id 5IU _pdbx_struct_mod_residue.label_seq_id 3 _pdbx_struct_mod_residue.auth_asym_id W _pdbx_struct_mod_residue.auth_comp_id 5IU _pdbx_struct_mod_residue.auth_seq_id -7 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DU _pdbx_struct_mod_residue.details "5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 132 ? C SER 1 2 1 Y 1 A GLY 133 ? C GLY 2 3 1 Y 1 A ALA 134 ? C ALA 3 4 1 Y 1 A LYS 135 ? C LYS 4 5 1 Y 1 A PRO 136 ? C PRO 5 6 1 Y 1 A GLY 137 ? C GLY 6 7 1 Y 1 A LYS 138 ? C LYS 7 8 1 Y 1 A LYS 139 ? C LYS 8 9 1 Y 1 B SER 132 ? D SER 1 10 1 Y 1 B GLY 133 ? D GLY 2 11 1 Y 1 B ALA 134 ? D ALA 3 12 1 Y 1 B LYS 135 ? D LYS 4 13 1 Y 1 B PRO 136 ? D PRO 5 14 1 Y 1 B GLY 137 ? D GLY 6 15 1 Y 1 B LYS 138 ? D LYS 7 16 1 Y 1 B LYS 139 ? D LYS 8 17 1 Y 1 B ASN 220 ? D ASN 89 18 1 Y 1 B SER 221 ? D SER 90 19 1 Y 1 B PRO 222 ? D PRO 91 20 1 Y 1 B ASP 223 ? D ASP 92 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5IU N1 N N N 1 5IU C2 C N N 2 5IU N3 N N N 3 5IU C4 C N N 4 5IU C5 C N N 5 5IU C6 C N N 6 5IU O2 O N N 7 5IU O4 O N N 8 5IU I5 I N N 9 5IU "C1'" C N R 10 5IU "C2'" C N N 11 5IU "C3'" C N S 12 5IU "C4'" C N R 13 5IU "O3'" O N N 14 5IU "O4'" O N N 15 5IU "C5'" C N N 16 5IU "O5'" O N N 17 5IU P P N N 18 5IU OP1 O N N 19 5IU OP2 O N N 20 5IU OP3 O N N 21 5IU HN3 H N N 22 5IU H6 H N N 23 5IU "H1'" H N N 24 5IU "H2'" H N N 25 5IU "H2''" H N N 26 5IU "H3'" H N N 27 5IU "H4'" H N N 28 5IU "HO3'" H N N 29 5IU "H5'" H N N 30 5IU "H5''" H N N 31 5IU HOP2 H N N 32 5IU HOP3 H N N 33 ALA N N N N 34 ALA CA C N S 35 ALA C C N N 36 ALA O O N N 37 ALA CB C N N 38 ALA OXT O N N 39 ALA H H N N 40 ALA H2 H N N 41 ALA HA H N N 42 ALA HB1 H N N 43 ALA HB2 H N N 44 ALA HB3 H N N 45 ALA HXT H N N 46 ARG N N N N 47 ARG CA C N S 48 ARG C C N N 49 ARG O O N N 50 ARG CB C N N 51 ARG CG C N N 52 ARG CD C N N 53 ARG NE N N N 54 ARG CZ C N N 55 ARG NH1 N N N 56 ARG NH2 N N N 57 ARG OXT O N N 58 ARG H H N N 59 ARG H2 H N N 60 ARG HA H N N 61 ARG HB2 H N N 62 ARG HB3 H N N 63 ARG HG2 H N N 64 ARG HG3 H N N 65 ARG HD2 H N N 66 ARG HD3 H N N 67 ARG HE H N N 68 ARG HH11 H N N 69 ARG HH12 H N N 70 ARG HH21 H N N 71 ARG HH22 H N N 72 ARG HXT H N N 73 ASN N N N N 74 ASN CA C N S 75 ASN C C N N 76 ASN O O N N 77 ASN CB C N N 78 ASN CG C N N 79 ASN OD1 O N N 80 ASN ND2 N N N 81 ASN OXT O N N 82 ASN H H N N 83 ASN H2 H N N 84 ASN HA H N N 85 ASN HB2 H N N 86 ASN HB3 H N N 87 ASN HD21 H N N 88 ASN HD22 H N N 89 ASN HXT H N N 90 ASP N N N N 91 ASP CA C N S 92 ASP C C N N 93 ASP O O N N 94 ASP CB C N N 95 ASP CG C N N 96 ASP OD1 O N N 97 ASP OD2 O N N 98 ASP OXT O N N 99 ASP H H N N 100 ASP H2 H N N 101 ASP HA H N N 102 ASP HB2 H N N 103 ASP HB3 H N N 104 ASP HD2 H N N 105 ASP HXT H N N 106 CYS N N N N 107 CYS CA C N R 108 CYS C C N N 109 CYS O O N N 110 CYS CB C N N 111 CYS SG S N N 112 CYS OXT O N N 113 CYS H H N N 114 CYS H2 H N N 115 CYS HA H N N 116 CYS HB2 H N N 117 CYS HB3 H N N 118 CYS HG H N N 119 CYS HXT H N N 120 DA OP3 O N N 121 DA P P N N 122 DA OP1 O N N 123 DA OP2 O N N 124 DA "O5'" O N N 125 DA "C5'" C N N 126 DA "C4'" C N R 127 DA "O4'" O N N 128 DA "C3'" C N S 129 DA "O3'" O N N 130 DA "C2'" C N N 131 DA "C1'" C N R 132 DA N9 N Y N 133 DA C8 C Y N 134 DA N7 N Y N 135 DA C5 C Y N 136 DA C6 C Y N 137 DA N6 N N N 138 DA N1 N Y N 139 DA C2 C Y N 140 DA N3 N Y N 141 DA C4 C Y N 142 DA HOP3 H N N 143 DA HOP2 H N N 144 DA "H5'" H N N 145 DA "H5''" H N N 146 DA "H4'" H N N 147 DA "H3'" H N N 148 DA "HO3'" H N N 149 DA "H2'" H N N 150 DA "H2''" H N N 151 DA "H1'" H N N 152 DA H8 H N N 153 DA H61 H N N 154 DA H62 H N N 155 DA H2 H N N 156 DC OP3 O N N 157 DC P P N N 158 DC OP1 O N N 159 DC OP2 O N N 160 DC "O5'" O N N 161 DC "C5'" C N N 162 DC "C4'" C N R 163 DC "O4'" O N N 164 DC "C3'" C N S 165 DC "O3'" O N N 166 DC "C2'" C N N 167 DC "C1'" C N R 168 DC N1 N N N 169 DC C2 C N N 170 DC O2 O N N 171 DC N3 N N N 172 DC C4 C N N 173 DC N4 N N N 174 DC C5 C N N 175 DC C6 C N N 176 DC HOP3 H N N 177 DC HOP2 H N N 178 DC "H5'" H N N 179 DC "H5''" H N N 180 DC "H4'" H N N 181 DC "H3'" H N N 182 DC "HO3'" H N N 183 DC "H2'" H N N 184 DC "H2''" H N N 185 DC "H1'" H N N 186 DC H41 H N N 187 DC H42 H N N 188 DC H5 H N N 189 DC H6 H N N 190 DG OP3 O N N 191 DG P P N N 192 DG OP1 O N N 193 DG OP2 O N N 194 DG "O5'" O N N 195 DG "C5'" C N N 196 DG "C4'" C N R 197 DG "O4'" O N N 198 DG "C3'" C N S 199 DG "O3'" O N N 200 DG "C2'" C N N 201 DG "C1'" C N R 202 DG N9 N Y N 203 DG C8 C Y N 204 DG N7 N Y N 205 DG C5 C Y N 206 DG C6 C N N 207 DG O6 O N N 208 DG N1 N N N 209 DG C2 C N N 210 DG N2 N N N 211 DG N3 N N N 212 DG C4 C Y N 213 DG HOP3 H N N 214 DG HOP2 H N N 215 DG "H5'" H N N 216 DG "H5''" H N N 217 DG "H4'" H N N 218 DG "H3'" H N N 219 DG "HO3'" H N N 220 DG "H2'" H N N 221 DG "H2''" H N N 222 DG "H1'" H N N 223 DG H8 H N N 224 DG H1 H N N 225 DG H21 H N N 226 DG H22 H N N 227 DT OP3 O N N 228 DT P P N N 229 DT OP1 O N N 230 DT OP2 O N N 231 DT "O5'" O N N 232 DT "C5'" C N N 233 DT "C4'" C N R 234 DT "O4'" O N N 235 DT "C3'" C N S 236 DT "O3'" O N N 237 DT "C2'" C N N 238 DT "C1'" C N R 239 DT N1 N N N 240 DT C2 C N N 241 DT O2 O N N 242 DT N3 N N N 243 DT C4 C N N 244 DT O4 O N N 245 DT C5 C N N 246 DT C7 C N N 247 DT C6 C N N 248 DT HOP3 H N N 249 DT HOP2 H N N 250 DT "H5'" H N N 251 DT "H5''" H N N 252 DT "H4'" H N N 253 DT "H3'" H N N 254 DT "HO3'" H N N 255 DT "H2'" H N N 256 DT "H2''" H N N 257 DT "H1'" H N N 258 DT H3 H N N 259 DT H71 H N N 260 DT H72 H N N 261 DT H73 H N N 262 DT H6 H N N 263 GLN N N N N 264 GLN CA C N S 265 GLN C C N N 266 GLN O O N N 267 GLN CB C N N 268 GLN CG C N N 269 GLN CD C N N 270 GLN OE1 O N N 271 GLN NE2 N N N 272 GLN OXT O N N 273 GLN H H N N 274 GLN H2 H N N 275 GLN HA H N N 276 GLN HB2 H N N 277 GLN HB3 H N N 278 GLN HG2 H N N 279 GLN HG3 H N N 280 GLN HE21 H N N 281 GLN HE22 H N N 282 GLN HXT H N N 283 GLU N N N N 284 GLU CA C N S 285 GLU C C N N 286 GLU O O N N 287 GLU CB C N N 288 GLU CG C N N 289 GLU CD C N N 290 GLU OE1 O N N 291 GLU OE2 O N N 292 GLU OXT O N N 293 GLU H H N N 294 GLU H2 H N N 295 GLU HA H N N 296 GLU HB2 H N N 297 GLU HB3 H N N 298 GLU HG2 H N N 299 GLU HG3 H N N 300 GLU HE2 H N N 301 GLU HXT H N N 302 GLY N N N N 303 GLY CA C N N 304 GLY C C N N 305 GLY O O N N 306 GLY OXT O N N 307 GLY H H N N 308 GLY H2 H N N 309 GLY HA2 H N N 310 GLY HA3 H N N 311 GLY HXT H N N 312 HIS N N N N 313 HIS CA C N S 314 HIS C C N N 315 HIS O O N N 316 HIS CB C N N 317 HIS CG C Y N 318 HIS ND1 N Y N 319 HIS CD2 C Y N 320 HIS CE1 C Y N 321 HIS NE2 N Y N 322 HIS OXT O N N 323 HIS H H N N 324 HIS H2 H N N 325 HIS HA H N N 326 HIS HB2 H N N 327 HIS HB3 H N N 328 HIS HD1 H N N 329 HIS HD2 H N N 330 HIS HE1 H N N 331 HIS HE2 H N N 332 HIS HXT H N N 333 ILE N N N N 334 ILE CA C N S 335 ILE C C N N 336 ILE O O N N 337 ILE CB C N S 338 ILE CG1 C N N 339 ILE CG2 C N N 340 ILE CD1 C N N 341 ILE OXT O N N 342 ILE H H N N 343 ILE H2 H N N 344 ILE HA H N N 345 ILE HB H N N 346 ILE HG12 H N N 347 ILE HG13 H N N 348 ILE HG21 H N N 349 ILE HG22 H N N 350 ILE HG23 H N N 351 ILE HD11 H N N 352 ILE HD12 H N N 353 ILE HD13 H N N 354 ILE HXT H N N 355 LEU N N N N 356 LEU CA C N S 357 LEU C C N N 358 LEU O O N N 359 LEU CB C N N 360 LEU CG C N N 361 LEU CD1 C N N 362 LEU CD2 C N N 363 LEU OXT O N N 364 LEU H H N N 365 LEU H2 H N N 366 LEU HA H N N 367 LEU HB2 H N N 368 LEU HB3 H N N 369 LEU HG H N N 370 LEU HD11 H N N 371 LEU HD12 H N N 372 LEU HD13 H N N 373 LEU HD21 H N N 374 LEU HD22 H N N 375 LEU HD23 H N N 376 LEU HXT H N N 377 LYS N N N N 378 LYS CA C N S 379 LYS C C N N 380 LYS O O N N 381 LYS CB C N N 382 LYS CG C N N 383 LYS CD C N N 384 LYS CE C N N 385 LYS NZ N N N 386 LYS OXT O N N 387 LYS H H N N 388 LYS H2 H N N 389 LYS HA H N N 390 LYS HB2 H N N 391 LYS HB3 H N N 392 LYS HG2 H N N 393 LYS HG3 H N N 394 LYS HD2 H N N 395 LYS HD3 H N N 396 LYS HE2 H N N 397 LYS HE3 H N N 398 LYS HZ1 H N N 399 LYS HZ2 H N N 400 LYS HZ3 H N N 401 LYS HXT H N N 402 MET N N N N 403 MET CA C N S 404 MET C C N N 405 MET O O N N 406 MET CB C N N 407 MET CG C N N 408 MET SD S N N 409 MET CE C N N 410 MET OXT O N N 411 MET H H N N 412 MET H2 H N N 413 MET HA H N N 414 MET HB2 H N N 415 MET HB3 H N N 416 MET HG2 H N N 417 MET HG3 H N N 418 MET HE1 H N N 419 MET HE2 H N N 420 MET HE3 H N N 421 MET HXT H N N 422 PHE N N N N 423 PHE CA C N S 424 PHE C C N N 425 PHE O O N N 426 PHE CB C N N 427 PHE CG C Y N 428 PHE CD1 C Y N 429 PHE CD2 C Y N 430 PHE CE1 C Y N 431 PHE CE2 C Y N 432 PHE CZ C Y N 433 PHE OXT O N N 434 PHE H H N N 435 PHE H2 H N N 436 PHE HA H N N 437 PHE HB2 H N N 438 PHE HB3 H N N 439 PHE HD1 H N N 440 PHE HD2 H N N 441 PHE HE1 H N N 442 PHE HE2 H N N 443 PHE HZ H N N 444 PHE HXT H N N 445 PRO N N N N 446 PRO CA C N S 447 PRO C C N N 448 PRO O O N N 449 PRO CB C N N 450 PRO CG C N N 451 PRO CD C N N 452 PRO OXT O N N 453 PRO H H N N 454 PRO HA H N N 455 PRO HB2 H N N 456 PRO HB3 H N N 457 PRO HG2 H N N 458 PRO HG3 H N N 459 PRO HD2 H N N 460 PRO HD3 H N N 461 PRO HXT H N N 462 SER N N N N 463 SER CA C N S 464 SER C C N N 465 SER O O N N 466 SER CB C N N 467 SER OG O N N 468 SER OXT O N N 469 SER H H N N 470 SER H2 H N N 471 SER HA H N N 472 SER HB2 H N N 473 SER HB3 H N N 474 SER HG H N N 475 SER HXT H N N 476 THR N N N N 477 THR CA C N S 478 THR C C N N 479 THR O O N N 480 THR CB C N R 481 THR OG1 O N N 482 THR CG2 C N N 483 THR OXT O N N 484 THR H H N N 485 THR H2 H N N 486 THR HA H N N 487 THR HB H N N 488 THR HG1 H N N 489 THR HG21 H N N 490 THR HG22 H N N 491 THR HG23 H N N 492 THR HXT H N N 493 TYR N N N N 494 TYR CA C N S 495 TYR C C N N 496 TYR O O N N 497 TYR CB C N N 498 TYR CG C Y N 499 TYR CD1 C Y N 500 TYR CD2 C Y N 501 TYR CE1 C Y N 502 TYR CE2 C Y N 503 TYR CZ C Y N 504 TYR OH O N N 505 TYR OXT O N N 506 TYR H H N N 507 TYR H2 H N N 508 TYR HA H N N 509 TYR HB2 H N N 510 TYR HB3 H N N 511 TYR HD1 H N N 512 TYR HD2 H N N 513 TYR HE1 H N N 514 TYR HE2 H N N 515 TYR HH H N N 516 TYR HXT H N N 517 VAL N N N N 518 VAL CA C N S 519 VAL C C N N 520 VAL O O N N 521 VAL CB C N N 522 VAL CG1 C N N 523 VAL CG2 C N N 524 VAL OXT O N N 525 VAL H H N N 526 VAL H2 H N N 527 VAL HA H N N 528 VAL HB H N N 529 VAL HG11 H N N 530 VAL HG12 H N N 531 VAL HG13 H N N 532 VAL HG21 H N N 533 VAL HG22 H N N 534 VAL HG23 H N N 535 VAL HXT H N N 536 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5IU N1 C2 sing N N 1 5IU N1 C6 sing N N 2 5IU N1 "C1'" sing N N 3 5IU C2 N3 sing N N 4 5IU C2 O2 doub N N 5 5IU N3 C4 sing N N 6 5IU N3 HN3 sing N N 7 5IU C4 C5 sing N N 8 5IU C4 O4 doub N N 9 5IU C5 C6 doub N N 10 5IU C5 I5 sing N N 11 5IU C6 H6 sing N N 12 5IU "C1'" "C2'" sing N N 13 5IU "C1'" "O4'" sing N N 14 5IU "C1'" "H1'" sing N N 15 5IU "C2'" "C3'" sing N N 16 5IU "C2'" "H2'" sing N N 17 5IU "C2'" "H2''" sing N N 18 5IU "C3'" "C4'" sing N N 19 5IU "C3'" "O3'" sing N N 20 5IU "C3'" "H3'" sing N N 21 5IU "C4'" "O4'" sing N N 22 5IU "C4'" "C5'" sing N N 23 5IU "C4'" "H4'" sing N N 24 5IU "O3'" "HO3'" sing N N 25 5IU "C5'" "O5'" sing N N 26 5IU "C5'" "H5'" sing N N 27 5IU "C5'" "H5''" sing N N 28 5IU "O5'" P sing N N 29 5IU P OP1 doub N N 30 5IU P OP2 sing N N 31 5IU P OP3 sing N N 32 5IU OP2 HOP2 sing N N 33 5IU OP3 HOP3 sing N N 34 ALA N CA sing N N 35 ALA N H sing N N 36 ALA N H2 sing N N 37 ALA CA C sing N N 38 ALA CA CB sing N N 39 ALA CA HA sing N N 40 ALA C O doub N N 41 ALA C OXT sing N N 42 ALA CB HB1 sing N N 43 ALA CB HB2 sing N N 44 ALA CB HB3 sing N N 45 ALA OXT HXT sing N N 46 ARG N CA sing N N 47 ARG N H sing N N 48 ARG N H2 sing N N 49 ARG CA C sing N N 50 ARG CA CB sing N N 51 ARG CA HA sing N N 52 ARG C O doub N N 53 ARG C OXT sing N N 54 ARG CB CG sing N N 55 ARG CB HB2 sing N N 56 ARG CB HB3 sing N N 57 ARG CG CD sing N N 58 ARG CG HG2 sing N N 59 ARG CG HG3 sing N N 60 ARG CD NE sing N N 61 ARG CD HD2 sing N N 62 ARG CD HD3 sing N N 63 ARG NE CZ sing N N 64 ARG NE HE sing N N 65 ARG CZ NH1 sing N N 66 ARG CZ NH2 doub N N 67 ARG NH1 HH11 sing N N 68 ARG NH1 HH12 sing N N 69 ARG NH2 HH21 sing N N 70 ARG NH2 HH22 sing N N 71 ARG OXT HXT sing N N 72 ASN N CA sing N N 73 ASN N H sing N N 74 ASN N H2 sing N N 75 ASN CA C sing N N 76 ASN CA CB sing N N 77 ASN CA HA sing N N 78 ASN C O doub N N 79 ASN C OXT sing N N 80 ASN CB CG sing N N 81 ASN CB HB2 sing N N 82 ASN CB HB3 sing N N 83 ASN CG OD1 doub N N 84 ASN CG ND2 sing N N 85 ASN ND2 HD21 sing N N 86 ASN ND2 HD22 sing N N 87 ASN OXT HXT sing N N 88 ASP N CA sing N N 89 ASP N H sing N N 90 ASP N H2 sing N N 91 ASP CA C sing N N 92 ASP CA CB sing N N 93 ASP CA HA sing N N 94 ASP C O doub N N 95 ASP C OXT sing N N 96 ASP CB CG sing N N 97 ASP CB HB2 sing N N 98 ASP CB HB3 sing N N 99 ASP CG OD1 doub N N 100 ASP CG OD2 sing N N 101 ASP OD2 HD2 sing N N 102 ASP OXT HXT sing N N 103 CYS N CA sing N N 104 CYS N H sing N N 105 CYS N H2 sing N N 106 CYS CA C sing N N 107 CYS CA CB sing N N 108 CYS CA HA sing N N 109 CYS C O doub N N 110 CYS C OXT sing N N 111 CYS CB SG sing N N 112 CYS CB HB2 sing N N 113 CYS CB HB3 sing N N 114 CYS SG HG sing N N 115 CYS OXT HXT sing N N 116 DA OP3 P sing N N 117 DA OP3 HOP3 sing N N 118 DA P OP1 doub N N 119 DA P OP2 sing N N 120 DA P "O5'" sing N N 121 DA OP2 HOP2 sing N N 122 DA "O5'" "C5'" sing N N 123 DA "C5'" "C4'" sing N N 124 DA "C5'" "H5'" sing N N 125 DA "C5'" "H5''" sing N N 126 DA "C4'" "O4'" sing N N 127 DA "C4'" "C3'" sing N N 128 DA "C4'" "H4'" sing N N 129 DA "O4'" "C1'" sing N N 130 DA "C3'" "O3'" sing N N 131 DA "C3'" "C2'" sing N N 132 DA "C3'" "H3'" sing N N 133 DA "O3'" "HO3'" sing N N 134 DA "C2'" "C1'" sing N N 135 DA "C2'" "H2'" sing N N 136 DA "C2'" "H2''" sing N N 137 DA "C1'" N9 sing N N 138 DA "C1'" "H1'" sing N N 139 DA N9 C8 sing Y N 140 DA N9 C4 sing Y N 141 DA C8 N7 doub Y N 142 DA C8 H8 sing N N 143 DA N7 C5 sing Y N 144 DA C5 C6 sing Y N 145 DA C5 C4 doub Y N 146 DA C6 N6 sing N N 147 DA C6 N1 doub Y N 148 DA N6 H61 sing N N 149 DA N6 H62 sing N N 150 DA N1 C2 sing Y N 151 DA C2 N3 doub Y N 152 DA C2 H2 sing N N 153 DA N3 C4 sing Y N 154 DC OP3 P sing N N 155 DC OP3 HOP3 sing N N 156 DC P OP1 doub N N 157 DC P OP2 sing N N 158 DC P "O5'" sing N N 159 DC OP2 HOP2 sing N N 160 DC "O5'" "C5'" sing N N 161 DC "C5'" "C4'" sing N N 162 DC "C5'" "H5'" sing N N 163 DC "C5'" "H5''" sing N N 164 DC "C4'" "O4'" sing N N 165 DC "C4'" "C3'" sing N N 166 DC "C4'" "H4'" sing N N 167 DC "O4'" "C1'" sing N N 168 DC "C3'" "O3'" sing N N 169 DC "C3'" "C2'" sing N N 170 DC "C3'" "H3'" sing N N 171 DC "O3'" "HO3'" sing N N 172 DC "C2'" "C1'" sing N N 173 DC "C2'" "H2'" sing N N 174 DC "C2'" "H2''" sing N N 175 DC "C1'" N1 sing N N 176 DC "C1'" "H1'" sing N N 177 DC N1 C2 sing N N 178 DC N1 C6 sing N N 179 DC C2 O2 doub N N 180 DC C2 N3 sing N N 181 DC N3 C4 doub N N 182 DC C4 N4 sing N N 183 DC C4 C5 sing N N 184 DC N4 H41 sing N N 185 DC N4 H42 sing N N 186 DC C5 C6 doub N N 187 DC C5 H5 sing N N 188 DC C6 H6 sing N N 189 DG OP3 P sing N N 190 DG OP3 HOP3 sing N N 191 DG P OP1 doub N N 192 DG P OP2 sing N N 193 DG P "O5'" sing N N 194 DG OP2 HOP2 sing N N 195 DG "O5'" "C5'" sing N N 196 DG "C5'" "C4'" sing N N 197 DG "C5'" "H5'" sing N N 198 DG "C5'" "H5''" sing N N 199 DG "C4'" "O4'" sing N N 200 DG "C4'" "C3'" sing N N 201 DG "C4'" "H4'" sing N N 202 DG "O4'" "C1'" sing N N 203 DG "C3'" "O3'" sing N N 204 DG "C3'" "C2'" sing N N 205 DG "C3'" "H3'" sing N N 206 DG "O3'" "HO3'" sing N N 207 DG "C2'" "C1'" sing N N 208 DG "C2'" "H2'" sing N N 209 DG "C2'" "H2''" sing N N 210 DG "C1'" N9 sing N N 211 DG "C1'" "H1'" sing N N 212 DG N9 C8 sing Y N 213 DG N9 C4 sing Y N 214 DG C8 N7 doub Y N 215 DG C8 H8 sing N N 216 DG N7 C5 sing Y N 217 DG C5 C6 sing N N 218 DG C5 C4 doub Y N 219 DG C6 O6 doub N N 220 DG C6 N1 sing N N 221 DG N1 C2 sing N N 222 DG N1 H1 sing N N 223 DG C2 N2 sing N N 224 DG C2 N3 doub N N 225 DG N2 H21 sing N N 226 DG N2 H22 sing N N 227 DG N3 C4 sing N N 228 DT OP3 P sing N N 229 DT OP3 HOP3 sing N N 230 DT P OP1 doub N N 231 DT P OP2 sing N N 232 DT P "O5'" sing N N 233 DT OP2 HOP2 sing N N 234 DT "O5'" "C5'" sing N N 235 DT "C5'" "C4'" sing N N 236 DT "C5'" "H5'" sing N N 237 DT "C5'" "H5''" sing N N 238 DT "C4'" "O4'" sing N N 239 DT "C4'" "C3'" sing N N 240 DT "C4'" "H4'" sing N N 241 DT "O4'" "C1'" sing N N 242 DT "C3'" "O3'" sing N N 243 DT "C3'" "C2'" sing N N 244 DT "C3'" "H3'" sing N N 245 DT "O3'" "HO3'" sing N N 246 DT "C2'" "C1'" sing N N 247 DT "C2'" "H2'" sing N N 248 DT "C2'" "H2''" sing N N 249 DT "C1'" N1 sing N N 250 DT "C1'" "H1'" sing N N 251 DT N1 C2 sing N N 252 DT N1 C6 sing N N 253 DT C2 O2 doub N N 254 DT C2 N3 sing N N 255 DT N3 C4 sing N N 256 DT N3 H3 sing N N 257 DT C4 O4 doub N N 258 DT C4 C5 sing N N 259 DT C5 C7 sing N N 260 DT C5 C6 doub N N 261 DT C7 H71 sing N N 262 DT C7 H72 sing N N 263 DT C7 H73 sing N N 264 DT C6 H6 sing N N 265 GLN N CA sing N N 266 GLN N H sing N N 267 GLN N H2 sing N N 268 GLN CA C sing N N 269 GLN CA CB sing N N 270 GLN CA HA sing N N 271 GLN C O doub N N 272 GLN C OXT sing N N 273 GLN CB CG sing N N 274 GLN CB HB2 sing N N 275 GLN CB HB3 sing N N 276 GLN CG CD sing N N 277 GLN CG HG2 sing N N 278 GLN CG HG3 sing N N 279 GLN CD OE1 doub N N 280 GLN CD NE2 sing N N 281 GLN NE2 HE21 sing N N 282 GLN NE2 HE22 sing N N 283 GLN OXT HXT sing N N 284 GLU N CA sing N N 285 GLU N H sing N N 286 GLU N H2 sing N N 287 GLU CA C sing N N 288 GLU CA CB sing N N 289 GLU CA HA sing N N 290 GLU C O doub N N 291 GLU C OXT sing N N 292 GLU CB CG sing N N 293 GLU CB HB2 sing N N 294 GLU CB HB3 sing N N 295 GLU CG CD sing N N 296 GLU CG HG2 sing N N 297 GLU CG HG3 sing N N 298 GLU CD OE1 doub N N 299 GLU CD OE2 sing N N 300 GLU OE2 HE2 sing N N 301 GLU OXT HXT sing N N 302 GLY N CA sing N N 303 GLY N H sing N N 304 GLY N H2 sing N N 305 GLY CA C sing N N 306 GLY CA HA2 sing N N 307 GLY CA HA3 sing N N 308 GLY C O doub N N 309 GLY C OXT sing N N 310 GLY OXT HXT sing N N 311 HIS N CA sing N N 312 HIS N H sing N N 313 HIS N H2 sing N N 314 HIS CA C sing N N 315 HIS CA CB sing N N 316 HIS CA HA sing N N 317 HIS C O doub N N 318 HIS C OXT sing N N 319 HIS CB CG sing N N 320 HIS CB HB2 sing N N 321 HIS CB HB3 sing N N 322 HIS CG ND1 sing Y N 323 HIS CG CD2 doub Y N 324 HIS ND1 CE1 doub Y N 325 HIS ND1 HD1 sing N N 326 HIS CD2 NE2 sing Y N 327 HIS CD2 HD2 sing N N 328 HIS CE1 NE2 sing Y N 329 HIS CE1 HE1 sing N N 330 HIS NE2 HE2 sing N N 331 HIS OXT HXT sing N N 332 ILE N CA sing N N 333 ILE N H sing N N 334 ILE N H2 sing N N 335 ILE CA C sing N N 336 ILE CA CB sing N N 337 ILE CA HA sing N N 338 ILE C O doub N N 339 ILE C OXT sing N N 340 ILE CB CG1 sing N N 341 ILE CB CG2 sing N N 342 ILE CB HB sing N N 343 ILE CG1 CD1 sing N N 344 ILE CG1 HG12 sing N N 345 ILE CG1 HG13 sing N N 346 ILE CG2 HG21 sing N N 347 ILE CG2 HG22 sing N N 348 ILE CG2 HG23 sing N N 349 ILE CD1 HD11 sing N N 350 ILE CD1 HD12 sing N N 351 ILE CD1 HD13 sing N N 352 ILE OXT HXT sing N N 353 LEU N CA sing N N 354 LEU N H sing N N 355 LEU N H2 sing N N 356 LEU CA C sing N N 357 LEU CA CB sing N N 358 LEU CA HA sing N N 359 LEU C O doub N N 360 LEU C OXT sing N N 361 LEU CB CG sing N N 362 LEU CB HB2 sing N N 363 LEU CB HB3 sing N N 364 LEU CG CD1 sing N N 365 LEU CG CD2 sing N N 366 LEU CG HG sing N N 367 LEU CD1 HD11 sing N N 368 LEU CD1 HD12 sing N N 369 LEU CD1 HD13 sing N N 370 LEU CD2 HD21 sing N N 371 LEU CD2 HD22 sing N N 372 LEU CD2 HD23 sing N N 373 LEU OXT HXT sing N N 374 LYS N CA sing N N 375 LYS N H sing N N 376 LYS N H2 sing N N 377 LYS CA C sing N N 378 LYS CA CB sing N N 379 LYS CA HA sing N N 380 LYS C O doub N N 381 LYS C OXT sing N N 382 LYS CB CG sing N N 383 LYS CB HB2 sing N N 384 LYS CB HB3 sing N N 385 LYS CG CD sing N N 386 LYS CG HG2 sing N N 387 LYS CG HG3 sing N N 388 LYS CD CE sing N N 389 LYS CD HD2 sing N N 390 LYS CD HD3 sing N N 391 LYS CE NZ sing N N 392 LYS CE HE2 sing N N 393 LYS CE HE3 sing N N 394 LYS NZ HZ1 sing N N 395 LYS NZ HZ2 sing N N 396 LYS NZ HZ3 sing N N 397 LYS OXT HXT sing N N 398 MET N CA sing N N 399 MET N H sing N N 400 MET N H2 sing N N 401 MET CA C sing N N 402 MET CA CB sing N N 403 MET CA HA sing N N 404 MET C O doub N N 405 MET C OXT sing N N 406 MET CB CG sing N N 407 MET CB HB2 sing N N 408 MET CB HB3 sing N N 409 MET CG SD sing N N 410 MET CG HG2 sing N N 411 MET CG HG3 sing N N 412 MET SD CE sing N N 413 MET CE HE1 sing N N 414 MET CE HE2 sing N N 415 MET CE HE3 sing N N 416 MET OXT HXT sing N N 417 PHE N CA sing N N 418 PHE N H sing N N 419 PHE N H2 sing N N 420 PHE CA C sing N N 421 PHE CA CB sing N N 422 PHE CA HA sing N N 423 PHE C O doub N N 424 PHE C OXT sing N N 425 PHE CB CG sing N N 426 PHE CB HB2 sing N N 427 PHE CB HB3 sing N N 428 PHE CG CD1 doub Y N 429 PHE CG CD2 sing Y N 430 PHE CD1 CE1 sing Y N 431 PHE CD1 HD1 sing N N 432 PHE CD2 CE2 doub Y N 433 PHE CD2 HD2 sing N N 434 PHE CE1 CZ doub Y N 435 PHE CE1 HE1 sing N N 436 PHE CE2 CZ sing Y N 437 PHE CE2 HE2 sing N N 438 PHE CZ HZ sing N N 439 PHE OXT HXT sing N N 440 PRO N CA sing N N 441 PRO N CD sing N N 442 PRO N H sing N N 443 PRO CA C sing N N 444 PRO CA CB sing N N 445 PRO CA HA sing N N 446 PRO C O doub N N 447 PRO C OXT sing N N 448 PRO CB CG sing N N 449 PRO CB HB2 sing N N 450 PRO CB HB3 sing N N 451 PRO CG CD sing N N 452 PRO CG HG2 sing N N 453 PRO CG HG3 sing N N 454 PRO CD HD2 sing N N 455 PRO CD HD3 sing N N 456 PRO OXT HXT sing N N 457 SER N CA sing N N 458 SER N H sing N N 459 SER N H2 sing N N 460 SER CA C sing N N 461 SER CA CB sing N N 462 SER CA HA sing N N 463 SER C O doub N N 464 SER C OXT sing N N 465 SER CB OG sing N N 466 SER CB HB2 sing N N 467 SER CB HB3 sing N N 468 SER OG HG sing N N 469 SER OXT HXT sing N N 470 THR N CA sing N N 471 THR N H sing N N 472 THR N H2 sing N N 473 THR CA C sing N N 474 THR CA CB sing N N 475 THR CA HA sing N N 476 THR C O doub N N 477 THR C OXT sing N N 478 THR CB OG1 sing N N 479 THR CB CG2 sing N N 480 THR CB HB sing N N 481 THR OG1 HG1 sing N N 482 THR CG2 HG21 sing N N 483 THR CG2 HG22 sing N N 484 THR CG2 HG23 sing N N 485 THR OXT HXT sing N N 486 TYR N CA sing N N 487 TYR N H sing N N 488 TYR N H2 sing N N 489 TYR CA C sing N N 490 TYR CA CB sing N N 491 TYR CA HA sing N N 492 TYR C O doub N N 493 TYR C OXT sing N N 494 TYR CB CG sing N N 495 TYR CB HB2 sing N N 496 TYR CB HB3 sing N N 497 TYR CG CD1 doub Y N 498 TYR CG CD2 sing Y N 499 TYR CD1 CE1 sing Y N 500 TYR CD1 HD1 sing N N 501 TYR CD2 CE2 doub Y N 502 TYR CD2 HD2 sing N N 503 TYR CE1 CZ doub Y N 504 TYR CE1 HE1 sing N N 505 TYR CE2 CZ sing Y N 506 TYR CE2 HE2 sing N N 507 TYR CZ OH sing N N 508 TYR OH HH sing N N 509 TYR OXT HXT sing N N 510 VAL N CA sing N N 511 VAL N H sing N N 512 VAL N H2 sing N N 513 VAL CA C sing N N 514 VAL CA CB sing N N 515 VAL CA HA sing N N 516 VAL C O doub N N 517 VAL C OXT sing N N 518 VAL CB CG1 sing N N 519 VAL CB CG2 sing N N 520 VAL CB HB sing N N 521 VAL CG1 HG11 sing N N 522 VAL CG1 HG12 sing N N 523 VAL CG1 HG13 sing N N 524 VAL CG2 HG21 sing N N 525 VAL CG2 HG22 sing N N 526 VAL CG2 HG23 sing N N 527 VAL OXT HXT sing N N 528 # _ndb_struct_conf_na.entry_id 1SRS _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 2 1_555 B DG 19 1_555 0.518 -0.220 0.028 13.695 -16.061 3.876 1 W_DC-8:DG-8_C W -8 ? C -8 ? 19 1 1 A 5IU 3 1_555 B DA 18 1_555 0.121 -0.146 0.049 7.885 -20.486 6.255 2 W_5IU-7:DA-7_C W -7 ? C -7 ? 20 1 1 A DT 4 1_555 B DA 17 1_555 -0.411 -0.251 -0.439 2.126 -16.191 -0.072 3 W_DT-6:DA-6_C W -6 ? C -6 ? 20 1 1 A DC 5 1_555 B DG 16 1_555 0.404 -0.436 0.064 -0.902 -6.809 -1.115 4 W_DC-5:DG-5_C W -5 ? C -5 ? 19 1 1 A DC 6 1_555 B DG 15 1_555 0.408 -0.282 0.300 2.211 -3.213 -0.330 5 W_DC-4:DG-4_C W -4 ? C -4 ? 19 1 1 A DT 7 1_555 B DA 14 1_555 -0.200 -0.139 -0.130 2.371 -9.656 3.684 6 W_DT-3:DA-3_C W -3 ? C -3 ? 20 1 1 A DA 8 1_555 B DT 13 1_555 0.357 -0.204 -0.079 5.830 -14.757 3.697 7 W_DA-2:DT-2_C W -2 ? C -2 ? 20 1 1 A DA 9 1_555 B DT 12 1_555 -0.143 -0.151 0.304 4.248 -13.334 2.421 8 W_DA-1:DT-1_C W -1 ? C -1 ? 20 1 1 A DT 10 1_555 B DA 11 1_555 0.066 -0.278 0.330 -1.923 -15.903 0.656 9 W_DT1:DA1_C W 1 ? C 1 ? 20 1 1 A DT 11 1_555 B DA 10 1_555 -0.858 -0.141 0.311 -9.905 -16.477 -0.331 10 W_DT2:DA2_C W 2 ? C 2 ? 20 1 1 A DA 12 1_555 B DT 9 1_555 0.174 -0.169 0.094 2.325 -6.354 3.769 11 W_DA3:DT3_C W 3 ? C 3 ? 20 1 1 A DG 13 1_555 B DC 8 1_555 -0.961 -0.221 0.343 2.071 -5.137 6.998 12 W_DG4:DC4_C W 4 ? C 4 ? 19 1 1 A DG 14 1_555 B DC 7 1_555 -0.466 -0.486 0.026 0.762 -8.245 -5.312 13 W_DG5:DC5_C W 5 ? C 5 ? 19 1 1 A DC 15 1_555 B DG 6 1_555 0.285 -0.247 -0.227 4.944 -4.236 -1.568 14 W_DC6:DG6_C W 6 ? C 6 ? 19 1 1 A DC 16 1_555 B DG 5 1_555 0.615 -0.189 -0.331 8.646 -10.017 5.523 15 W_DC7:DG7_C W 7 ? C 7 ? 19 1 1 A DA 17 1_555 B DT 4 1_555 0.241 -0.169 -0.182 -12.800 -4.064 1.676 16 W_DA8:DT8_C W 8 ? C 8 ? 20 1 1 A DT 18 1_555 B DA 3 1_555 0.322 -0.076 0.245 -0.821 -3.299 9.025 17 W_DT9:DA9_C W 9 ? C 9 ? 20 1 1 A DG 19 1_555 B DC 2 1_555 -0.583 -0.146 -0.040 -1.666 -9.591 4.586 18 W_DG10:DC10_C W 10 ? C 10 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 2 1_555 B DG 19 1_555 A 5IU 3 1_555 B DA 18 1_555 0.487 -0.790 3.360 0.773 4.449 36.364 -1.877 -0.668 3.253 7.095 -1.232 36.634 1 WW_DC-85IU-7:DA-7DG-8_CC W -8 ? C -8 ? W -7 ? C -7 ? 1 A 5IU 3 1_555 B DA 18 1_555 A DT 4 1_555 B DA 17 1_555 -0.984 -0.417 3.424 0.935 0.280 29.213 -0.890 2.162 3.387 0.554 -1.852 29.229 2 WW_5IU-7DT-6:DA-6DA-7_CC W -7 ? C -7 ? W -6 ? C -6 ? 1 A DT 4 1_555 B DA 17 1_555 A DC 5 1_555 B DG 16 1_555 -0.605 -0.112 3.450 -5.546 10.098 35.245 -1.623 0.158 3.348 16.153 8.872 37.023 3 WW_DT-6DC-5:DG-5DA-6_CC W -6 ? C -6 ? W -5 ? C -5 ? 1 A DC 5 1_555 B DG 16 1_555 A DC 6 1_555 B DG 15 1_555 0.140 0.210 3.439 -1.282 4.568 33.138 -0.431 -0.466 3.428 7.959 2.233 33.467 4 WW_DC-5DC-4:DG-4DG-5_CC W -5 ? C -5 ? W -4 ? C -4 ? 1 A DC 6 1_555 B DG 15 1_555 A DT 7 1_555 B DA 14 1_555 1.823 -0.127 3.215 14.132 10.541 31.080 -1.892 -0.722 3.484 17.975 -24.099 35.624 5 WW_DC-4DT-3:DA-3DG-4_CC W -4 ? C -4 ? W -3 ? C -3 ? 1 A DT 7 1_555 B DA 14 1_555 A DA 8 1_555 B DT 13 1_555 -0.221 1.200 3.292 1.559 1.645 38.247 1.620 0.534 3.327 2.508 -2.377 38.311 6 WW_DT-3DA-2:DT-2DA-3_CC W -3 ? C -3 ? W -2 ? C -2 ? 1 A DA 8 1_555 B DT 13 1_555 A DA 9 1_555 B DT 12 1_555 -0.176 -0.012 3.257 -5.804 -5.334 38.359 0.623 -0.435 3.222 -8.014 8.720 39.131 7 WW_DA-2DA-1:DT-1DT-2_CC W -2 ? C -2 ? W -1 ? C -1 ? 1 A DA 9 1_555 B DT 12 1_555 A DT 10 1_555 B DA 11 1_555 0.348 -1.028 3.515 0.634 -4.270 31.230 -1.020 -0.512 3.626 -7.884 -1.171 31.519 8 WW_DA-1DT1:DA1DT-1_CC W -1 ? C -1 ? W 1 ? C 1 ? 1 A DT 10 1_555 B DA 11 1_555 A DT 11 1_555 B DA 10 1_555 0.165 0.147 3.460 3.478 -4.964 38.419 0.859 0.199 3.417 -7.487 -5.245 38.876 9 WW_DT1DT2:DA2DA1_CC W 1 ? C 1 ? W 2 ? C 2 ? 1 A DT 11 1_555 B DA 10 1_555 A DA 12 1_555 B DT 9 1_555 0.332 0.267 3.107 1.058 0.794 39.710 0.304 -0.372 3.119 1.169 -1.557 39.732 10 WW_DT2DA3:DT3DA2_CC W 2 ? C 2 ? W 3 ? C 3 ? 1 A DA 12 1_555 B DT 9 1_555 A DG 13 1_555 B DC 8 1_555 -1.098 -0.054 3.226 -8.090 7.815 28.978 -1.648 0.448 3.283 14.927 15.453 31.041 11 WW_DA3DG4:DC4DT3_CC W 3 ? C 3 ? W 4 ? C 4 ? 1 A DG 13 1_555 B DC 8 1_555 A DG 14 1_555 B DC 7 1_555 -0.807 0.515 3.437 -1.268 10.261 33.015 -0.847 1.147 3.466 17.529 2.165 34.553 12 WW_DG4DG5:DC5DC4_CC W 4 ? C 4 ? W 5 ? C 5 ? 1 A DG 14 1_555 B DC 7 1_555 A DC 15 1_555 B DG 6 1_555 0.734 -0.454 3.239 2.197 9.824 35.657 -2.012 -0.867 3.050 15.663 -3.502 37.006 13 WW_DG5DC6:DG6DC5_CC W 5 ? C 5 ? W 6 ? C 6 ? 1 A DC 15 1_555 B DG 6 1_555 A DC 16 1_555 B DG 5 1_555 0.564 0.292 3.266 4.352 8.170 35.065 -0.700 -0.283 3.294 13.276 -7.073 36.229 14 WW_DC6DC7:DG7DG6_CC W 6 ? C 6 ? W 7 ? C 7 ? 1 A DC 16 1_555 B DG 5 1_555 A DA 17 1_555 B DT 4 1_555 -0.238 -0.606 3.799 -1.933 11.746 33.249 -2.980 0.066 3.405 19.756 3.251 35.259 15 WW_DC7DA8:DT8DG7_CC W 7 ? C 7 ? W 8 ? C 8 ? 1 A DA 17 1_555 B DT 4 1_555 A DT 18 1_555 B DA 3 1_555 -0.053 -0.348 3.108 -2.094 -4.658 29.624 0.246 -0.309 3.121 -9.026 4.058 30.052 16 WW_DA8DT9:DA9DT8_CC W 8 ? C 8 ? W 9 ? C 9 ? 1 A DT 18 1_555 B DA 3 1_555 A DG 19 1_555 B DC 2 1_555 -0.585 0.338 3.235 1.261 8.458 31.803 -0.847 1.247 3.193 15.097 -2.250 32.904 17 WW_DT9DG10:DC10DA9_CC W 9 ? C 9 ? W 10 ? C 10 ? # _atom_sites.entry_id 1SRS _atom_sites.fract_transf_matrix[1][1] 0.009360 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009360 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013007 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C I N O P S # loop_