data_1SVI # _entry.id 1SVI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1SVI pdb_00001svi 10.2210/pdb1svi/pdb RCSB RCSB022028 ? ? WWPDB D_1000022028 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-05-25 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 1 4 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1SVI _pdbx_database_status.recvd_initial_deposition_date 2004-03-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1SUL 'Crystal Structure of the apo-YsxC' unspecified PDB 1SVW 'Crystal Structure of YsxC complexed with GMPPNP' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ruzheinikov, S.N.' 1 'Das, S.K.' 2 'Sedelnikova, S.E.' 3 'Baker, P.J.' 4 'Artymiuk, P.J.' 5 'Garcia-Lara, J.' 6 'Foster, S.J.' 7 'Rice, D.W.' 8 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Analysis of the Open and Closed Conformations of the GTP-binding Protein YsxC from Bacillus subtilis.' J.Mol.Biol. 339 265 278 2004 JMOBAK UK 0022-2836 0070 ? 15136032 10.1016/j.jmb.2004.03.043 1 ;Expression, purification, crystallization and preliminary crystallographic analysis of a putative GTP-binding protein, YsxC, from Bacillus subtilis . ; 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ruzheinikov, S.N.' 1 ? primary 'Das, S.K.' 2 ? primary 'Sedelnikova, S.E.' 3 ? primary 'Baker, P.J.' 4 ? primary 'Artymiuk, P.J.' 5 ? primary 'Garcia-Lara, J.' 6 ? primary 'Foster, S.J.' 7 ? primary 'Rice, D.W.' 8 ? 1 'Das, S.K.' 9 ? 1 'Sedelnikova, S.E.' 10 ? 1 'Baker, P.J.' 11 ? 1 'Ruzheinikov, S.N.' 12 ? 1 'Foster, S.J.' 13 ? 1 'Rice, D.W.' 14 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'GTP-binding protein YSXC' 22060.414 1 ? ? ? ? 2 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 3 water nat water 18.015 246 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYG FAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKADKIPKGKWDKHAKVVR QTLNIDPEDELILFSSETKKGKDEAWGAIKKMINR ; _entity_poly.pdbx_seq_one_letter_code_can ;MKVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYG FAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKADKIPKGKWDKHAKVVR QTLNIDPEDELILFSSETKKGKDEAWGAIKKMINR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-DIPHOSPHATE" GDP 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 VAL n 1 4 THR n 1 5 LYS n 1 6 SER n 1 7 GLU n 1 8 ILE n 1 9 VAL n 1 10 ILE n 1 11 SER n 1 12 ALA n 1 13 VAL n 1 14 LYS n 1 15 PRO n 1 16 GLU n 1 17 GLN n 1 18 TYR n 1 19 PRO n 1 20 GLU n 1 21 GLY n 1 22 GLY n 1 23 LEU n 1 24 PRO n 1 25 GLU n 1 26 ILE n 1 27 ALA n 1 28 LEU n 1 29 ALA n 1 30 GLY n 1 31 ARG n 1 32 SER n 1 33 ASN n 1 34 VAL n 1 35 GLY n 1 36 LYS n 1 37 SER n 1 38 SER n 1 39 PHE n 1 40 ILE n 1 41 ASN n 1 42 SER n 1 43 LEU n 1 44 ILE n 1 45 ASN n 1 46 ARG n 1 47 LYS n 1 48 ASN n 1 49 LEU n 1 50 ALA n 1 51 ARG n 1 52 THR n 1 53 SER n 1 54 SER n 1 55 LYS n 1 56 PRO n 1 57 GLY n 1 58 LYS n 1 59 THR n 1 60 GLN n 1 61 THR n 1 62 LEU n 1 63 ASN n 1 64 PHE n 1 65 TYR n 1 66 ILE n 1 67 ILE n 1 68 ASN n 1 69 ASP n 1 70 GLU n 1 71 LEU n 1 72 HIS n 1 73 PHE n 1 74 VAL n 1 75 ASP n 1 76 VAL n 1 77 PRO n 1 78 GLY n 1 79 TYR n 1 80 GLY n 1 81 PHE n 1 82 ALA n 1 83 LYS n 1 84 VAL n 1 85 SER n 1 86 LYS n 1 87 SER n 1 88 GLU n 1 89 ARG n 1 90 GLU n 1 91 ALA n 1 92 TRP n 1 93 GLY n 1 94 ARG n 1 95 MET n 1 96 ILE n 1 97 GLU n 1 98 THR n 1 99 TYR n 1 100 ILE n 1 101 THR n 1 102 THR n 1 103 ARG n 1 104 GLU n 1 105 GLU n 1 106 LEU n 1 107 LYS n 1 108 ALA n 1 109 VAL n 1 110 VAL n 1 111 GLN n 1 112 ILE n 1 113 VAL n 1 114 ASP n 1 115 LEU n 1 116 ARG n 1 117 HIS n 1 118 ALA n 1 119 PRO n 1 120 SER n 1 121 ASN n 1 122 ASP n 1 123 ASP n 1 124 VAL n 1 125 GLN n 1 126 MET n 1 127 TYR n 1 128 GLU n 1 129 PHE n 1 130 LEU n 1 131 LYS n 1 132 TYR n 1 133 TYR n 1 134 GLY n 1 135 ILE n 1 136 PRO n 1 137 VAL n 1 138 ILE n 1 139 VAL n 1 140 ILE n 1 141 ALA n 1 142 THR n 1 143 LYS n 1 144 ALA n 1 145 ASP n 1 146 LYS n 1 147 ILE n 1 148 PRO n 1 149 LYS n 1 150 GLY n 1 151 LYS n 1 152 TRP n 1 153 ASP n 1 154 LYS n 1 155 HIS n 1 156 ALA n 1 157 LYS n 1 158 VAL n 1 159 VAL n 1 160 ARG n 1 161 GLN n 1 162 THR n 1 163 LEU n 1 164 ASN n 1 165 ILE n 1 166 ASP n 1 167 PRO n 1 168 GLU n 1 169 ASP n 1 170 GLU n 1 171 LEU n 1 172 ILE n 1 173 LEU n 1 174 PHE n 1 175 SER n 1 176 SER n 1 177 GLU n 1 178 THR n 1 179 LYS n 1 180 LYS n 1 181 GLY n 1 182 LYS n 1 183 ASP n 1 184 GLU n 1 185 ALA n 1 186 TRP n 1 187 GLY n 1 188 ALA n 1 189 ILE n 1 190 LYS n 1 191 LYS n 1 192 MET n 1 193 ILE n 1 194 ASN n 1 195 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bacillus _entity_src_gen.pdbx_gene_src_gene 'YsxC, ENGB, BSU28190' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1423 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 TYR 18 18 18 TYR TYR A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 PRO 24 24 24 PRO PRO A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 ASN 33 33 33 ASN ASN A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 PHE 39 39 39 PHE PHE A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 ASN 41 41 41 ASN ASN A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 ASN 45 45 45 ASN ASN A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 LYS 47 47 ? ? ? A . n A 1 48 ASN 48 48 ? ? ? A . n A 1 49 LEU 49 49 ? ? ? A . n A 1 50 ALA 50 50 ? ? ? A . n A 1 51 ARG 51 51 ? ? ? A . n A 1 52 THR 52 52 ? ? ? A . n A 1 53 SER 53 53 ? ? ? A . n A 1 54 SER 54 54 ? ? ? A . n A 1 55 LYS 55 55 ? ? ? A . n A 1 56 PRO 56 56 ? ? ? A . n A 1 57 GLY 57 57 ? ? ? A . n A 1 58 LYS 58 58 ? ? ? A . n A 1 59 THR 59 59 ? ? ? A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 HIS 72 72 72 HIS HIS A . n A 1 73 PHE 73 73 73 PHE PHE A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 PHE 81 81 81 PHE PHE A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 SER 87 87 87 SER SER A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 TRP 92 92 92 TRP TRP A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 MET 95 95 95 MET MET A . n A 1 96 ILE 96 96 96 ILE ILE A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 TYR 99 99 99 TYR TYR A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 THR 102 102 102 THR THR A . n A 1 103 ARG 103 103 103 ARG ARG A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 GLN 111 111 111 GLN GLN A . n A 1 112 ILE 112 112 112 ILE ILE A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 ASP 114 114 114 ASP ASP A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 ARG 116 116 116 ARG ARG A . n A 1 117 HIS 117 117 117 HIS HIS A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 PRO 119 119 119 PRO PRO A . n A 1 120 SER 120 120 120 SER SER A . n A 1 121 ASN 121 121 121 ASN ASN A . n A 1 122 ASP 122 122 122 ASP ASP A . n A 1 123 ASP 123 123 123 ASP ASP A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 GLN 125 125 125 GLN GLN A . n A 1 126 MET 126 126 126 MET MET A . n A 1 127 TYR 127 127 127 TYR TYR A . n A 1 128 GLU 128 128 128 GLU GLU A . n A 1 129 PHE 129 129 129 PHE PHE A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 TYR 132 132 132 TYR TYR A . n A 1 133 TYR 133 133 133 TYR TYR A . n A 1 134 GLY 134 134 134 GLY GLY A . n A 1 135 ILE 135 135 135 ILE ILE A . n A 1 136 PRO 136 136 136 PRO PRO A . n A 1 137 VAL 137 137 137 VAL VAL A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 VAL 139 139 139 VAL VAL A . n A 1 140 ILE 140 140 140 ILE ILE A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 THR 142 142 142 THR THR A . n A 1 143 LYS 143 143 143 LYS LYS A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 LYS 146 146 146 LYS LYS A . n A 1 147 ILE 147 147 147 ILE ILE A . n A 1 148 PRO 148 148 148 PRO PRO A . n A 1 149 LYS 149 149 149 LYS LYS A . n A 1 150 GLY 150 150 150 GLY GLY A . n A 1 151 LYS 151 151 151 LYS LYS A . n A 1 152 TRP 152 152 152 TRP TRP A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 HIS 155 155 155 HIS HIS A . n A 1 156 ALA 156 156 156 ALA ALA A . n A 1 157 LYS 157 157 157 LYS LYS A . n A 1 158 VAL 158 158 158 VAL VAL A . n A 1 159 VAL 159 159 159 VAL VAL A . n A 1 160 ARG 160 160 160 ARG ARG A . n A 1 161 GLN 161 161 161 GLN GLN A . n A 1 162 THR 162 162 162 THR THR A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 ILE 165 165 165 ILE ILE A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 PRO 167 167 167 PRO PRO A . n A 1 168 GLU 168 168 168 GLU GLU A . n A 1 169 ASP 169 169 169 ASP ASP A . n A 1 170 GLU 170 170 170 GLU GLU A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 ILE 172 172 172 ILE ILE A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 PHE 174 174 174 PHE PHE A . n A 1 175 SER 175 175 175 SER SER A . n A 1 176 SER 176 176 176 SER SER A . n A 1 177 GLU 177 177 177 GLU GLU A . n A 1 178 THR 178 178 178 THR THR A . n A 1 179 LYS 179 179 179 LYS LYS A . n A 1 180 LYS 180 180 180 LYS LYS A . n A 1 181 GLY 181 181 181 GLY GLY A . n A 1 182 LYS 182 182 182 LYS LYS A . n A 1 183 ASP 183 183 183 ASP ASP A . n A 1 184 GLU 184 184 184 GLU GLU A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 TRP 186 186 186 TRP TRP A . n A 1 187 GLY 187 187 187 GLY GLY A . n A 1 188 ALA 188 188 188 ALA ALA A . n A 1 189 ILE 189 189 189 ILE ILE A . n A 1 190 LYS 190 190 190 LYS LYS A . n A 1 191 LYS 191 191 191 LYS LYS A . n A 1 192 MET 192 192 192 MET MET A . n A 1 193 ILE 193 193 193 ILE ILE A . n A 1 194 ASN 194 194 194 ASN ASN A . n A 1 195 ARG 195 195 195 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP 1 401 401 GDP GDP A . C 3 HOH 1 402 1 HOH HOH A . C 3 HOH 2 403 2 HOH HOH A . C 3 HOH 3 404 3 HOH HOH A . C 3 HOH 4 405 4 HOH HOH A . C 3 HOH 5 406 5 HOH HOH A . C 3 HOH 6 407 6 HOH HOH A . C 3 HOH 7 408 7 HOH HOH A . C 3 HOH 8 409 8 HOH HOH A . C 3 HOH 9 410 9 HOH HOH A . C 3 HOH 10 411 10 HOH HOH A . C 3 HOH 11 412 11 HOH HOH A . C 3 HOH 12 413 12 HOH HOH A . C 3 HOH 13 414 13 HOH HOH A . C 3 HOH 14 415 14 HOH HOH A . C 3 HOH 15 416 15 HOH HOH A . C 3 HOH 16 417 16 HOH HOH A . C 3 HOH 17 418 17 HOH HOH A . C 3 HOH 18 419 18 HOH HOH A . C 3 HOH 19 420 19 HOH HOH A . C 3 HOH 20 421 20 HOH HOH A . C 3 HOH 21 422 21 HOH HOH A . C 3 HOH 22 423 22 HOH HOH A . C 3 HOH 23 424 23 HOH HOH A . C 3 HOH 24 425 24 HOH HOH A . C 3 HOH 25 426 25 HOH HOH A . C 3 HOH 26 427 26 HOH HOH A . C 3 HOH 27 428 27 HOH HOH A . C 3 HOH 28 429 28 HOH HOH A . C 3 HOH 29 430 29 HOH HOH A . C 3 HOH 30 431 30 HOH HOH A . C 3 HOH 31 432 31 HOH HOH A . C 3 HOH 32 433 32 HOH HOH A . C 3 HOH 33 434 33 HOH HOH A . C 3 HOH 34 435 34 HOH HOH A . C 3 HOH 35 436 35 HOH HOH A . C 3 HOH 36 437 36 HOH HOH A . C 3 HOH 37 438 37 HOH HOH A . C 3 HOH 38 439 38 HOH HOH A . C 3 HOH 39 440 39 HOH HOH A . C 3 HOH 40 441 40 HOH HOH A . C 3 HOH 41 442 41 HOH HOH A . C 3 HOH 42 443 42 HOH HOH A . C 3 HOH 43 444 43 HOH HOH A . C 3 HOH 44 445 44 HOH HOH A . C 3 HOH 45 446 45 HOH HOH A . C 3 HOH 46 447 46 HOH HOH A . C 3 HOH 47 448 47 HOH HOH A . C 3 HOH 48 449 48 HOH HOH A . C 3 HOH 49 450 49 HOH HOH A . C 3 HOH 50 451 50 HOH HOH A . C 3 HOH 51 452 51 HOH HOH A . C 3 HOH 52 453 52 HOH HOH A . C 3 HOH 53 454 53 HOH HOH A . C 3 HOH 54 455 54 HOH HOH A . C 3 HOH 55 456 55 HOH HOH A . C 3 HOH 56 457 56 HOH HOH A . C 3 HOH 57 458 57 HOH HOH A . C 3 HOH 58 459 58 HOH HOH A . C 3 HOH 59 460 59 HOH HOH A . C 3 HOH 60 461 60 HOH HOH A . C 3 HOH 61 462 61 HOH HOH A . C 3 HOH 62 463 62 HOH HOH A . C 3 HOH 63 464 63 HOH HOH A . C 3 HOH 64 465 64 HOH HOH A . C 3 HOH 65 466 65 HOH HOH A . C 3 HOH 66 467 66 HOH HOH A . C 3 HOH 67 468 67 HOH HOH A . C 3 HOH 68 469 68 HOH HOH A . C 3 HOH 69 470 69 HOH HOH A . C 3 HOH 70 471 70 HOH HOH A . C 3 HOH 71 472 71 HOH HOH A . C 3 HOH 72 473 72 HOH HOH A . C 3 HOH 73 474 73 HOH HOH A . C 3 HOH 74 475 74 HOH HOH A . C 3 HOH 75 476 75 HOH HOH A . C 3 HOH 76 477 76 HOH HOH A . C 3 HOH 77 478 77 HOH HOH A . C 3 HOH 78 479 78 HOH HOH A . C 3 HOH 79 480 79 HOH HOH A . C 3 HOH 80 481 80 HOH HOH A . C 3 HOH 81 482 81 HOH HOH A . C 3 HOH 82 483 82 HOH HOH A . C 3 HOH 83 484 83 HOH HOH A . C 3 HOH 84 485 84 HOH HOH A . C 3 HOH 85 486 85 HOH HOH A . C 3 HOH 86 487 86 HOH HOH A . C 3 HOH 87 488 87 HOH HOH A . C 3 HOH 88 489 88 HOH HOH A . C 3 HOH 89 490 89 HOH HOH A . C 3 HOH 90 491 90 HOH HOH A . C 3 HOH 91 492 91 HOH HOH A . C 3 HOH 92 493 92 HOH HOH A . C 3 HOH 93 494 93 HOH HOH A . C 3 HOH 94 495 94 HOH HOH A . C 3 HOH 95 496 95 HOH HOH A . C 3 HOH 96 497 96 HOH HOH A . C 3 HOH 97 498 97 HOH HOH A . C 3 HOH 98 499 98 HOH HOH A . C 3 HOH 99 500 99 HOH HOH A . C 3 HOH 100 501 100 HOH HOH A . C 3 HOH 101 502 101 HOH HOH A . C 3 HOH 102 503 102 HOH HOH A . C 3 HOH 103 504 103 HOH HOH A . C 3 HOH 104 505 104 HOH HOH A . C 3 HOH 105 506 105 HOH HOH A . C 3 HOH 106 507 106 HOH HOH A . C 3 HOH 107 508 107 HOH HOH A . C 3 HOH 108 509 108 HOH HOH A . C 3 HOH 109 510 109 HOH HOH A . C 3 HOH 110 511 110 HOH HOH A . C 3 HOH 111 512 111 HOH HOH A . C 3 HOH 112 513 112 HOH HOH A . C 3 HOH 113 514 113 HOH HOH A . C 3 HOH 114 515 114 HOH HOH A . C 3 HOH 115 516 115 HOH HOH A . C 3 HOH 116 517 116 HOH HOH A . C 3 HOH 117 518 117 HOH HOH A . C 3 HOH 118 519 118 HOH HOH A . C 3 HOH 119 520 119 HOH HOH A . C 3 HOH 120 521 120 HOH HOH A . C 3 HOH 121 522 121 HOH HOH A . C 3 HOH 122 523 122 HOH HOH A . C 3 HOH 123 524 123 HOH HOH A . C 3 HOH 124 525 124 HOH HOH A . C 3 HOH 125 526 125 HOH HOH A . C 3 HOH 126 527 126 HOH HOH A . C 3 HOH 127 528 127 HOH HOH A . C 3 HOH 128 529 128 HOH HOH A . C 3 HOH 129 530 129 HOH HOH A . C 3 HOH 130 531 130 HOH HOH A . C 3 HOH 131 532 131 HOH HOH A . C 3 HOH 132 533 132 HOH HOH A . C 3 HOH 133 534 133 HOH HOH A . C 3 HOH 134 535 134 HOH HOH A . C 3 HOH 135 536 135 HOH HOH A . C 3 HOH 136 537 136 HOH HOH A . C 3 HOH 137 538 137 HOH HOH A . C 3 HOH 138 539 138 HOH HOH A . C 3 HOH 139 540 139 HOH HOH A . C 3 HOH 140 541 140 HOH HOH A . C 3 HOH 141 542 141 HOH HOH A . C 3 HOH 142 543 142 HOH HOH A . C 3 HOH 143 544 143 HOH HOH A . C 3 HOH 144 545 144 HOH HOH A . C 3 HOH 145 546 145 HOH HOH A . C 3 HOH 146 547 146 HOH HOH A . C 3 HOH 147 548 147 HOH HOH A . C 3 HOH 148 549 148 HOH HOH A . C 3 HOH 149 550 149 HOH HOH A . C 3 HOH 150 551 150 HOH HOH A . C 3 HOH 151 552 151 HOH HOH A . C 3 HOH 152 553 152 HOH HOH A . C 3 HOH 153 554 153 HOH HOH A . C 3 HOH 154 555 154 HOH HOH A . C 3 HOH 155 556 155 HOH HOH A . C 3 HOH 156 557 156 HOH HOH A . C 3 HOH 157 558 157 HOH HOH A . C 3 HOH 158 559 158 HOH HOH A . C 3 HOH 159 560 159 HOH HOH A . C 3 HOH 160 561 160 HOH HOH A . C 3 HOH 161 562 161 HOH HOH A . C 3 HOH 162 563 162 HOH HOH A . C 3 HOH 163 564 163 HOH HOH A . C 3 HOH 164 565 164 HOH HOH A . C 3 HOH 165 566 165 HOH HOH A . C 3 HOH 166 567 166 HOH HOH A . C 3 HOH 167 568 167 HOH HOH A . C 3 HOH 168 569 168 HOH HOH A . C 3 HOH 169 570 169 HOH HOH A . C 3 HOH 170 571 170 HOH HOH A . C 3 HOH 171 572 171 HOH HOH A . C 3 HOH 172 573 172 HOH HOH A . C 3 HOH 173 574 173 HOH HOH A . C 3 HOH 174 575 174 HOH HOH A . C 3 HOH 175 576 175 HOH HOH A . C 3 HOH 176 577 176 HOH HOH A . C 3 HOH 177 578 177 HOH HOH A . C 3 HOH 178 579 178 HOH HOH A . C 3 HOH 179 580 179 HOH HOH A . C 3 HOH 180 581 180 HOH HOH A . C 3 HOH 181 582 181 HOH HOH A . C 3 HOH 182 583 182 HOH HOH A . C 3 HOH 183 584 183 HOH HOH A . C 3 HOH 184 585 184 HOH HOH A . C 3 HOH 185 586 185 HOH HOH A . C 3 HOH 186 587 186 HOH HOH A . C 3 HOH 187 588 187 HOH HOH A . C 3 HOH 188 589 188 HOH HOH A . C 3 HOH 189 590 189 HOH HOH A . C 3 HOH 190 591 190 HOH HOH A . C 3 HOH 191 592 191 HOH HOH A . C 3 HOH 192 593 192 HOH HOH A . C 3 HOH 193 594 193 HOH HOH A . C 3 HOH 194 595 194 HOH HOH A . C 3 HOH 195 596 195 HOH HOH A . C 3 HOH 196 597 196 HOH HOH A . C 3 HOH 197 598 197 HOH HOH A . C 3 HOH 198 599 198 HOH HOH A . C 3 HOH 199 600 199 HOH HOH A . C 3 HOH 200 601 200 HOH HOH A . C 3 HOH 201 602 201 HOH HOH A . C 3 HOH 202 603 202 HOH HOH A . C 3 HOH 203 604 203 HOH HOH A . C 3 HOH 204 605 204 HOH HOH A . C 3 HOH 205 606 205 HOH HOH A . C 3 HOH 206 607 206 HOH HOH A . C 3 HOH 207 608 207 HOH HOH A . C 3 HOH 208 609 208 HOH HOH A . C 3 HOH 209 610 209 HOH HOH A . C 3 HOH 210 611 210 HOH HOH A . C 3 HOH 211 612 211 HOH HOH A . C 3 HOH 212 613 212 HOH HOH A . C 3 HOH 213 614 213 HOH HOH A . C 3 HOH 214 615 214 HOH HOH A . C 3 HOH 215 616 215 HOH HOH A . C 3 HOH 216 617 216 HOH HOH A . C 3 HOH 217 618 217 HOH HOH A . C 3 HOH 218 619 218 HOH HOH A . C 3 HOH 219 620 219 HOH HOH A . C 3 HOH 220 621 220 HOH HOH A . C 3 HOH 221 622 221 HOH HOH A . C 3 HOH 222 623 222 HOH HOH A . C 3 HOH 223 624 223 HOH HOH A . C 3 HOH 224 625 224 HOH HOH A . C 3 HOH 225 626 225 HOH HOH A . C 3 HOH 226 627 226 HOH HOH A . C 3 HOH 227 628 227 HOH HOH A . C 3 HOH 228 629 228 HOH HOH A . C 3 HOH 229 630 229 HOH HOH A . C 3 HOH 230 631 230 HOH HOH A . C 3 HOH 231 632 231 HOH HOH A . C 3 HOH 232 633 232 HOH HOH A . C 3 HOH 233 634 233 HOH HOH A . C 3 HOH 234 635 234 HOH HOH A . C 3 HOH 235 636 235 HOH HOH A . C 3 HOH 236 637 236 HOH HOH A . C 3 HOH 237 638 237 HOH HOH A . C 3 HOH 238 639 238 HOH HOH A . C 3 HOH 239 640 239 HOH HOH A . C 3 HOH 240 641 240 HOH HOH A . C 3 HOH 241 642 241 HOH HOH A . C 3 HOH 242 643 242 HOH HOH A . C 3 HOH 243 644 243 HOH HOH A . C 3 HOH 244 645 244 HOH HOH A . C 3 HOH 245 646 245 HOH HOH A . C 3 HOH 246 647 246 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.0 ? 1 MAR345 'data collection' . ? 2 SCALEPACK 'data scaling' . ? 3 MLPHARE phasing . ? 4 # _cell.entry_id 1SVI _cell.length_a 46.179 _cell.length_b 68.305 _cell.length_c 61.999 _cell.angle_alpha 90.00 _cell.angle_beta 94.05 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SVI _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # _exptl.entry_id 1SVI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 44.34 _exptl_crystal.description ? _exptl_crystal.density_Matthews 2.21 # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 290 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'PG 4000, isopropanol, N Hepes buffer, GDP,MgCl2, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 290K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2002-01-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1SVI _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.d_resolution_high 1.95 _reflns.d_resolution_low 10 _reflns.number_all ? _reflns.number_obs 13194 _reflns.percent_possible_obs 94.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1SVI _refine.ls_number_reflns_obs 12485 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 1.95 _refine.ls_percent_reflns_obs 94.13 _refine.ls_R_factor_obs 0.17831 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17614 _refine.ls_R_factor_R_free 0.22174 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 641 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.957 _refine.correlation_coeff_Fo_to_Fc_free 0.934 _refine.B_iso_mean 17.442 _refine.aniso_B[1][1] 0.34 _refine.aniso_B[2][2] -0.53 _refine.aniso_B[3][3] 0.11 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.58 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.199 _refine.pdbx_overall_ESU_R_Free 0.167 _refine.overall_SU_ML 0.122 _refine.overall_SU_B 4.265 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1457 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 246 _refine_hist.number_atoms_total 1731 _refine_hist.d_res_high 1.95 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.022 ? 1515 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.287 1.982 ? 2049 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 3.397 3.000 ? 180 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.494 15.000 ? 291 'X-RAY DIFFRACTION' ? r_chiral_restr 0.089 0.200 ? 227 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1104 'X-RAY DIFFRACTION' ? r_nbd_refined 0.235 0.300 ? 774 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.214 0.500 ? 197 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.231 0.300 ? 43 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.630 0.500 ? 22 'X-RAY DIFFRACTION' ? r_mcbond_it 0.547 1.500 ? 906 'X-RAY DIFFRACTION' ? r_mcangle_it 1.061 2.000 ? 1471 'X-RAY DIFFRACTION' ? r_scbond_it 1.791 3.000 ? 609 'X-RAY DIFFRACTION' ? r_scangle_it 3.031 4.500 ? 578 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.950 _refine_ls_shell.d_res_low 1.999 _refine_ls_shell.number_reflns_R_work 887 _refine_ls_shell.R_factor_R_work 0.237 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.309 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 43 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1SVI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1SVI _struct.title 'Crystal Structure of the GTP-binding protein YsxC complexed with GDP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1SVI _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'YsxC, ENGB, GTPase, GTP-binding protein, GDP, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ENGB_BACSU _struct_ref.pdbx_db_accession P38424 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYG FAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKADKIPKGKWDKHAKVVR QTLNIDPEDELILFSSETKKGKDEAWGAIKKMINR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1SVI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 195 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P38424 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 195 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 195 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 14 ? TYR A 18 ? LYS A 14 TYR A 18 5 ? 5 HELX_P HELX_P2 2 GLY A 35 ? ASN A 45 ? GLY A 35 ASN A 45 1 ? 11 HELX_P HELX_P3 3 SER A 85 ? ARG A 103 ? SER A 85 ARG A 103 1 ? 19 HELX_P HELX_P4 4 SER A 120 ? TYR A 133 ? SER A 120 TYR A 133 1 ? 14 HELX_P HELX_P5 5 LYS A 143 ? ILE A 147 ? LYS A 143 ILE A 147 5 ? 5 HELX_P HELX_P6 6 PRO A 148 ? GLY A 150 ? PRO A 148 GLY A 150 5 ? 3 HELX_P HELX_P7 7 LYS A 151 ? ASN A 164 ? LYS A 151 ASN A 164 1 ? 14 HELX_P HELX_P8 8 GLY A 181 ? ASN A 194 ? GLY A 181 ASN A 194 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 6 ? ALA A 12 ? SER A 6 ALA A 12 A 2 LEU A 62 ? ILE A 67 ? LEU A 62 ILE A 67 A 3 LEU A 71 ? ASP A 75 ? LEU A 71 ASP A 75 A 4 GLU A 25 ? GLY A 30 ? GLU A 25 GLY A 30 A 5 LEU A 106 ? ASP A 114 ? LEU A 106 ASP A 114 A 6 VAL A 137 ? THR A 142 ? VAL A 137 THR A 142 A 7 GLU A 170 ? LEU A 173 ? GLU A 170 LEU A 173 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 9 ? N VAL A 9 O PHE A 64 ? O PHE A 64 A 2 3 N TYR A 65 ? N TYR A 65 O PHE A 73 ? O PHE A 73 A 3 4 O VAL A 74 ? O VAL A 74 N ILE A 26 ? N ILE A 26 A 4 5 N ALA A 27 ? N ALA A 27 O VAL A 110 ? O VAL A 110 A 5 6 N VAL A 113 ? N VAL A 113 O ILE A 140 ? O ILE A 140 A 6 7 N VAL A 139 ? N VAL A 139 O GLU A 170 ? O GLU A 170 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id GDP _struct_site.pdbx_auth_seq_id 401 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 17 _struct_site.details 'BINDING SITE FOR RESIDUE GDP A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 ASN A 33 ? ASN A 33 . ? 1_555 ? 2 AC1 17 VAL A 34 ? VAL A 34 . ? 1_555 ? 3 AC1 17 GLY A 35 ? GLY A 35 . ? 1_555 ? 4 AC1 17 LYS A 36 ? LYS A 36 . ? 1_555 ? 5 AC1 17 SER A 37 ? SER A 37 . ? 1_555 ? 6 AC1 17 SER A 38 ? SER A 38 . ? 1_555 ? 7 AC1 17 THR A 142 ? THR A 142 . ? 1_555 ? 8 AC1 17 LYS A 143 ? LYS A 143 . ? 1_555 ? 9 AC1 17 ASP A 145 ? ASP A 145 . ? 1_555 ? 10 AC1 17 LYS A 146 ? LYS A 146 . ? 1_555 ? 11 AC1 17 SER A 175 ? SER A 175 . ? 1_555 ? 12 AC1 17 SER A 176 ? SER A 176 . ? 1_555 ? 13 AC1 17 HOH C . ? HOH A 409 . ? 1_555 ? 14 AC1 17 HOH C . ? HOH A 412 . ? 1_555 ? 15 AC1 17 HOH C . ? HOH A 414 . ? 1_555 ? 16 AC1 17 HOH C . ? HOH A 546 . ? 1_555 ? 17 AC1 17 HOH C . ? HOH A 565 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE2 A GLU 97 ? ? O A HOH 531 ? ? 1.88 2 1 O A HOH 525 ? ? O A HOH 577 ? ? 1.94 3 1 O A HOH 572 ? ? O A HOH 575 ? ? 2.08 4 1 O A HOH 486 ? ? O A HOH 628 ? ? 2.09 5 1 O A HOH 461 ? ? O A HOH 492 ? ? 2.15 6 1 ND2 A ASN 164 ? ? O A HOH 493 ? ? 2.15 7 1 O A HOH 539 ? ? O A HOH 610 ? ? 2.16 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 647 ? ? 1_555 O A HOH 647 ? ? 2_656 1.26 2 1 O A HOH 569 ? ? 1_555 O A HOH 569 ? ? 2_656 1.29 3 1 O A HOH 646 ? ? 1_555 O A HOH 646 ? ? 2_656 1.55 4 1 O A HOH 600 ? ? 1_555 O A HOH 600 ? ? 2_656 1.58 5 1 O A HOH 544 ? ? 1_555 O A HOH 557 ? ? 2_657 2.06 6 1 NZ A LYS 157 ? ? 1_555 OE1 A GLU 170 ? ? 2_556 2.12 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 123 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 123 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 123 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.81 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 5.51 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 45 ? ? 60.58 66.36 2 1 ASN A 68 ? ? 49.64 27.25 # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 10.4150 _pdbx_refine_tls.origin_y 34.7705 _pdbx_refine_tls.origin_z 44.6358 _pdbx_refine_tls.T[1][1] 0.0227 _pdbx_refine_tls.T[2][2] 0.0406 _pdbx_refine_tls.T[3][3] 0.0437 _pdbx_refine_tls.T[1][2] 0.0300 _pdbx_refine_tls.T[1][3] -0.0041 _pdbx_refine_tls.T[2][3] 0.0004 _pdbx_refine_tls.L[1][1] 1.3004 _pdbx_refine_tls.L[2][2] 1.3124 _pdbx_refine_tls.L[3][3] 2.7536 _pdbx_refine_tls.L[1][2] -0.0941 _pdbx_refine_tls.L[1][3] -0.1497 _pdbx_refine_tls.L[2][3] -0.3525 _pdbx_refine_tls.S[1][1] -0.0025 _pdbx_refine_tls.S[1][2] -0.0566 _pdbx_refine_tls.S[1][3] 0.0547 _pdbx_refine_tls.S[2][1] 0.1490 _pdbx_refine_tls.S[2][2] 0.0837 _pdbx_refine_tls.S[2][3] -0.0353 _pdbx_refine_tls.S[3][1] -0.0936 _pdbx_refine_tls.S[3][2] -0.2315 _pdbx_refine_tls.S[3][3] -0.0812 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 1 _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 195 _pdbx_refine_tls_group.end_auth_seq_id 195 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 47 ? A LYS 47 2 1 Y 1 A ASN 48 ? A ASN 48 3 1 Y 1 A LEU 49 ? A LEU 49 4 1 Y 1 A ALA 50 ? A ALA 50 5 1 Y 1 A ARG 51 ? A ARG 51 6 1 Y 1 A THR 52 ? A THR 52 7 1 Y 1 A SER 53 ? A SER 53 8 1 Y 1 A SER 54 ? A SER 54 9 1 Y 1 A LYS 55 ? A LYS 55 10 1 Y 1 A PRO 56 ? A PRO 56 11 1 Y 1 A GLY 57 ? A GLY 57 12 1 Y 1 A LYS 58 ? A LYS 58 13 1 Y 1 A THR 59 ? A THR 59 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GDP PB P N N 74 GDP O1B O N N 75 GDP O2B O N N 76 GDP O3B O N N 77 GDP O3A O N N 78 GDP PA P N N 79 GDP O1A O N N 80 GDP O2A O N N 81 GDP "O5'" O N N 82 GDP "C5'" C N N 83 GDP "C4'" C N R 84 GDP "O4'" O N N 85 GDP "C3'" C N S 86 GDP "O3'" O N N 87 GDP "C2'" C N R 88 GDP "O2'" O N N 89 GDP "C1'" C N R 90 GDP N9 N Y N 91 GDP C8 C Y N 92 GDP N7 N Y N 93 GDP C5 C Y N 94 GDP C6 C N N 95 GDP O6 O N N 96 GDP N1 N N N 97 GDP C2 C N N 98 GDP N2 N N N 99 GDP N3 N N N 100 GDP C4 C Y N 101 GDP HOB2 H N N 102 GDP HOB3 H N N 103 GDP HOA2 H N N 104 GDP "H5'" H N N 105 GDP "H5''" H N N 106 GDP "H4'" H N N 107 GDP "H3'" H N N 108 GDP "HO3'" H N N 109 GDP "H2'" H N N 110 GDP "HO2'" H N N 111 GDP "H1'" H N N 112 GDP H8 H N N 113 GDP HN1 H N N 114 GDP HN21 H N N 115 GDP HN22 H N N 116 GLN N N N N 117 GLN CA C N S 118 GLN C C N N 119 GLN O O N N 120 GLN CB C N N 121 GLN CG C N N 122 GLN CD C N N 123 GLN OE1 O N N 124 GLN NE2 N N N 125 GLN OXT O N N 126 GLN H H N N 127 GLN H2 H N N 128 GLN HA H N N 129 GLN HB2 H N N 130 GLN HB3 H N N 131 GLN HG2 H N N 132 GLN HG3 H N N 133 GLN HE21 H N N 134 GLN HE22 H N N 135 GLN HXT H N N 136 GLU N N N N 137 GLU CA C N S 138 GLU C C N N 139 GLU O O N N 140 GLU CB C N N 141 GLU CG C N N 142 GLU CD C N N 143 GLU OE1 O N N 144 GLU OE2 O N N 145 GLU OXT O N N 146 GLU H H N N 147 GLU H2 H N N 148 GLU HA H N N 149 GLU HB2 H N N 150 GLU HB3 H N N 151 GLU HG2 H N N 152 GLU HG3 H N N 153 GLU HE2 H N N 154 GLU HXT H N N 155 GLY N N N N 156 GLY CA C N N 157 GLY C C N N 158 GLY O O N N 159 GLY OXT O N N 160 GLY H H N N 161 GLY H2 H N N 162 GLY HA2 H N N 163 GLY HA3 H N N 164 GLY HXT H N N 165 HIS N N N N 166 HIS CA C N S 167 HIS C C N N 168 HIS O O N N 169 HIS CB C N N 170 HIS CG C Y N 171 HIS ND1 N Y N 172 HIS CD2 C Y N 173 HIS CE1 C Y N 174 HIS NE2 N Y N 175 HIS OXT O N N 176 HIS H H N N 177 HIS H2 H N N 178 HIS HA H N N 179 HIS HB2 H N N 180 HIS HB3 H N N 181 HIS HD1 H N N 182 HIS HD2 H N N 183 HIS HE1 H N N 184 HIS HE2 H N N 185 HIS HXT H N N 186 HOH O O N N 187 HOH H1 H N N 188 HOH H2 H N N 189 ILE N N N N 190 ILE CA C N S 191 ILE C C N N 192 ILE O O N N 193 ILE CB C N S 194 ILE CG1 C N N 195 ILE CG2 C N N 196 ILE CD1 C N N 197 ILE OXT O N N 198 ILE H H N N 199 ILE H2 H N N 200 ILE HA H N N 201 ILE HB H N N 202 ILE HG12 H N N 203 ILE HG13 H N N 204 ILE HG21 H N N 205 ILE HG22 H N N 206 ILE HG23 H N N 207 ILE HD11 H N N 208 ILE HD12 H N N 209 ILE HD13 H N N 210 ILE HXT H N N 211 LEU N N N N 212 LEU CA C N S 213 LEU C C N N 214 LEU O O N N 215 LEU CB C N N 216 LEU CG C N N 217 LEU CD1 C N N 218 LEU CD2 C N N 219 LEU OXT O N N 220 LEU H H N N 221 LEU H2 H N N 222 LEU HA H N N 223 LEU HB2 H N N 224 LEU HB3 H N N 225 LEU HG H N N 226 LEU HD11 H N N 227 LEU HD12 H N N 228 LEU HD13 H N N 229 LEU HD21 H N N 230 LEU HD22 H N N 231 LEU HD23 H N N 232 LEU HXT H N N 233 LYS N N N N 234 LYS CA C N S 235 LYS C C N N 236 LYS O O N N 237 LYS CB C N N 238 LYS CG C N N 239 LYS CD C N N 240 LYS CE C N N 241 LYS NZ N N N 242 LYS OXT O N N 243 LYS H H N N 244 LYS H2 H N N 245 LYS HA H N N 246 LYS HB2 H N N 247 LYS HB3 H N N 248 LYS HG2 H N N 249 LYS HG3 H N N 250 LYS HD2 H N N 251 LYS HD3 H N N 252 LYS HE2 H N N 253 LYS HE3 H N N 254 LYS HZ1 H N N 255 LYS HZ2 H N N 256 LYS HZ3 H N N 257 LYS HXT H N N 258 MET N N N N 259 MET CA C N S 260 MET C C N N 261 MET O O N N 262 MET CB C N N 263 MET CG C N N 264 MET SD S N N 265 MET CE C N N 266 MET OXT O N N 267 MET H H N N 268 MET H2 H N N 269 MET HA H N N 270 MET HB2 H N N 271 MET HB3 H N N 272 MET HG2 H N N 273 MET HG3 H N N 274 MET HE1 H N N 275 MET HE2 H N N 276 MET HE3 H N N 277 MET HXT H N N 278 PHE N N N N 279 PHE CA C N S 280 PHE C C N N 281 PHE O O N N 282 PHE CB C N N 283 PHE CG C Y N 284 PHE CD1 C Y N 285 PHE CD2 C Y N 286 PHE CE1 C Y N 287 PHE CE2 C Y N 288 PHE CZ C Y N 289 PHE OXT O N N 290 PHE H H N N 291 PHE H2 H N N 292 PHE HA H N N 293 PHE HB2 H N N 294 PHE HB3 H N N 295 PHE HD1 H N N 296 PHE HD2 H N N 297 PHE HE1 H N N 298 PHE HE2 H N N 299 PHE HZ H N N 300 PHE HXT H N N 301 PRO N N N N 302 PRO CA C N S 303 PRO C C N N 304 PRO O O N N 305 PRO CB C N N 306 PRO CG C N N 307 PRO CD C N N 308 PRO OXT O N N 309 PRO H H N N 310 PRO HA H N N 311 PRO HB2 H N N 312 PRO HB3 H N N 313 PRO HG2 H N N 314 PRO HG3 H N N 315 PRO HD2 H N N 316 PRO HD3 H N N 317 PRO HXT H N N 318 SER N N N N 319 SER CA C N S 320 SER C C N N 321 SER O O N N 322 SER CB C N N 323 SER OG O N N 324 SER OXT O N N 325 SER H H N N 326 SER H2 H N N 327 SER HA H N N 328 SER HB2 H N N 329 SER HB3 H N N 330 SER HG H N N 331 SER HXT H N N 332 THR N N N N 333 THR CA C N S 334 THR C C N N 335 THR O O N N 336 THR CB C N R 337 THR OG1 O N N 338 THR CG2 C N N 339 THR OXT O N N 340 THR H H N N 341 THR H2 H N N 342 THR HA H N N 343 THR HB H N N 344 THR HG1 H N N 345 THR HG21 H N N 346 THR HG22 H N N 347 THR HG23 H N N 348 THR HXT H N N 349 TRP N N N N 350 TRP CA C N S 351 TRP C C N N 352 TRP O O N N 353 TRP CB C N N 354 TRP CG C Y N 355 TRP CD1 C Y N 356 TRP CD2 C Y N 357 TRP NE1 N Y N 358 TRP CE2 C Y N 359 TRP CE3 C Y N 360 TRP CZ2 C Y N 361 TRP CZ3 C Y N 362 TRP CH2 C Y N 363 TRP OXT O N N 364 TRP H H N N 365 TRP H2 H N N 366 TRP HA H N N 367 TRP HB2 H N N 368 TRP HB3 H N N 369 TRP HD1 H N N 370 TRP HE1 H N N 371 TRP HE3 H N N 372 TRP HZ2 H N N 373 TRP HZ3 H N N 374 TRP HH2 H N N 375 TRP HXT H N N 376 TYR N N N N 377 TYR CA C N S 378 TYR C C N N 379 TYR O O N N 380 TYR CB C N N 381 TYR CG C Y N 382 TYR CD1 C Y N 383 TYR CD2 C Y N 384 TYR CE1 C Y N 385 TYR CE2 C Y N 386 TYR CZ C Y N 387 TYR OH O N N 388 TYR OXT O N N 389 TYR H H N N 390 TYR H2 H N N 391 TYR HA H N N 392 TYR HB2 H N N 393 TYR HB3 H N N 394 TYR HD1 H N N 395 TYR HD2 H N N 396 TYR HE1 H N N 397 TYR HE2 H N N 398 TYR HH H N N 399 TYR HXT H N N 400 VAL N N N N 401 VAL CA C N S 402 VAL C C N N 403 VAL O O N N 404 VAL CB C N N 405 VAL CG1 C N N 406 VAL CG2 C N N 407 VAL OXT O N N 408 VAL H H N N 409 VAL H2 H N N 410 VAL HA H N N 411 VAL HB H N N 412 VAL HG11 H N N 413 VAL HG12 H N N 414 VAL HG13 H N N 415 VAL HG21 H N N 416 VAL HG22 H N N 417 VAL HG23 H N N 418 VAL HXT H N N 419 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GDP PB O1B doub N N 70 GDP PB O2B sing N N 71 GDP PB O3B sing N N 72 GDP PB O3A sing N N 73 GDP O2B HOB2 sing N N 74 GDP O3B HOB3 sing N N 75 GDP O3A PA sing N N 76 GDP PA O1A doub N N 77 GDP PA O2A sing N N 78 GDP PA "O5'" sing N N 79 GDP O2A HOA2 sing N N 80 GDP "O5'" "C5'" sing N N 81 GDP "C5'" "C4'" sing N N 82 GDP "C5'" "H5'" sing N N 83 GDP "C5'" "H5''" sing N N 84 GDP "C4'" "O4'" sing N N 85 GDP "C4'" "C3'" sing N N 86 GDP "C4'" "H4'" sing N N 87 GDP "O4'" "C1'" sing N N 88 GDP "C3'" "O3'" sing N N 89 GDP "C3'" "C2'" sing N N 90 GDP "C3'" "H3'" sing N N 91 GDP "O3'" "HO3'" sing N N 92 GDP "C2'" "O2'" sing N N 93 GDP "C2'" "C1'" sing N N 94 GDP "C2'" "H2'" sing N N 95 GDP "O2'" "HO2'" sing N N 96 GDP "C1'" N9 sing N N 97 GDP "C1'" "H1'" sing N N 98 GDP N9 C8 sing Y N 99 GDP N9 C4 sing Y N 100 GDP C8 N7 doub Y N 101 GDP C8 H8 sing N N 102 GDP N7 C5 sing Y N 103 GDP C5 C6 sing N N 104 GDP C5 C4 doub Y N 105 GDP C6 O6 doub N N 106 GDP C6 N1 sing N N 107 GDP N1 C2 sing N N 108 GDP N1 HN1 sing N N 109 GDP C2 N2 sing N N 110 GDP C2 N3 doub N N 111 GDP N2 HN21 sing N N 112 GDP N2 HN22 sing N N 113 GDP N3 C4 sing N N 114 GLN N CA sing N N 115 GLN N H sing N N 116 GLN N H2 sing N N 117 GLN CA C sing N N 118 GLN CA CB sing N N 119 GLN CA HA sing N N 120 GLN C O doub N N 121 GLN C OXT sing N N 122 GLN CB CG sing N N 123 GLN CB HB2 sing N N 124 GLN CB HB3 sing N N 125 GLN CG CD sing N N 126 GLN CG HG2 sing N N 127 GLN CG HG3 sing N N 128 GLN CD OE1 doub N N 129 GLN CD NE2 sing N N 130 GLN NE2 HE21 sing N N 131 GLN NE2 HE22 sing N N 132 GLN OXT HXT sing N N 133 GLU N CA sing N N 134 GLU N H sing N N 135 GLU N H2 sing N N 136 GLU CA C sing N N 137 GLU CA CB sing N N 138 GLU CA HA sing N N 139 GLU C O doub N N 140 GLU C OXT sing N N 141 GLU CB CG sing N N 142 GLU CB HB2 sing N N 143 GLU CB HB3 sing N N 144 GLU CG CD sing N N 145 GLU CG HG2 sing N N 146 GLU CG HG3 sing N N 147 GLU CD OE1 doub N N 148 GLU CD OE2 sing N N 149 GLU OE2 HE2 sing N N 150 GLU OXT HXT sing N N 151 GLY N CA sing N N 152 GLY N H sing N N 153 GLY N H2 sing N N 154 GLY CA C sing N N 155 GLY CA HA2 sing N N 156 GLY CA HA3 sing N N 157 GLY C O doub N N 158 GLY C OXT sing N N 159 GLY OXT HXT sing N N 160 HIS N CA sing N N 161 HIS N H sing N N 162 HIS N H2 sing N N 163 HIS CA C sing N N 164 HIS CA CB sing N N 165 HIS CA HA sing N N 166 HIS C O doub N N 167 HIS C OXT sing N N 168 HIS CB CG sing N N 169 HIS CB HB2 sing N N 170 HIS CB HB3 sing N N 171 HIS CG ND1 sing Y N 172 HIS CG CD2 doub Y N 173 HIS ND1 CE1 doub Y N 174 HIS ND1 HD1 sing N N 175 HIS CD2 NE2 sing Y N 176 HIS CD2 HD2 sing N N 177 HIS CE1 NE2 sing Y N 178 HIS CE1 HE1 sing N N 179 HIS NE2 HE2 sing N N 180 HIS OXT HXT sing N N 181 HOH O H1 sing N N 182 HOH O H2 sing N N 183 ILE N CA sing N N 184 ILE N H sing N N 185 ILE N H2 sing N N 186 ILE CA C sing N N 187 ILE CA CB sing N N 188 ILE CA HA sing N N 189 ILE C O doub N N 190 ILE C OXT sing N N 191 ILE CB CG1 sing N N 192 ILE CB CG2 sing N N 193 ILE CB HB sing N N 194 ILE CG1 CD1 sing N N 195 ILE CG1 HG12 sing N N 196 ILE CG1 HG13 sing N N 197 ILE CG2 HG21 sing N N 198 ILE CG2 HG22 sing N N 199 ILE CG2 HG23 sing N N 200 ILE CD1 HD11 sing N N 201 ILE CD1 HD12 sing N N 202 ILE CD1 HD13 sing N N 203 ILE OXT HXT sing N N 204 LEU N CA sing N N 205 LEU N H sing N N 206 LEU N H2 sing N N 207 LEU CA C sing N N 208 LEU CA CB sing N N 209 LEU CA HA sing N N 210 LEU C O doub N N 211 LEU C OXT sing N N 212 LEU CB CG sing N N 213 LEU CB HB2 sing N N 214 LEU CB HB3 sing N N 215 LEU CG CD1 sing N N 216 LEU CG CD2 sing N N 217 LEU CG HG sing N N 218 LEU CD1 HD11 sing N N 219 LEU CD1 HD12 sing N N 220 LEU CD1 HD13 sing N N 221 LEU CD2 HD21 sing N N 222 LEU CD2 HD22 sing N N 223 LEU CD2 HD23 sing N N 224 LEU OXT HXT sing N N 225 LYS N CA sing N N 226 LYS N H sing N N 227 LYS N H2 sing N N 228 LYS CA C sing N N 229 LYS CA CB sing N N 230 LYS CA HA sing N N 231 LYS C O doub N N 232 LYS C OXT sing N N 233 LYS CB CG sing N N 234 LYS CB HB2 sing N N 235 LYS CB HB3 sing N N 236 LYS CG CD sing N N 237 LYS CG HG2 sing N N 238 LYS CG HG3 sing N N 239 LYS CD CE sing N N 240 LYS CD HD2 sing N N 241 LYS CD HD3 sing N N 242 LYS CE NZ sing N N 243 LYS CE HE2 sing N N 244 LYS CE HE3 sing N N 245 LYS NZ HZ1 sing N N 246 LYS NZ HZ2 sing N N 247 LYS NZ HZ3 sing N N 248 LYS OXT HXT sing N N 249 MET N CA sing N N 250 MET N H sing N N 251 MET N H2 sing N N 252 MET CA C sing N N 253 MET CA CB sing N N 254 MET CA HA sing N N 255 MET C O doub N N 256 MET C OXT sing N N 257 MET CB CG sing N N 258 MET CB HB2 sing N N 259 MET CB HB3 sing N N 260 MET CG SD sing N N 261 MET CG HG2 sing N N 262 MET CG HG3 sing N N 263 MET SD CE sing N N 264 MET CE HE1 sing N N 265 MET CE HE2 sing N N 266 MET CE HE3 sing N N 267 MET OXT HXT sing N N 268 PHE N CA sing N N 269 PHE N H sing N N 270 PHE N H2 sing N N 271 PHE CA C sing N N 272 PHE CA CB sing N N 273 PHE CA HA sing N N 274 PHE C O doub N N 275 PHE C OXT sing N N 276 PHE CB CG sing N N 277 PHE CB HB2 sing N N 278 PHE CB HB3 sing N N 279 PHE CG CD1 doub Y N 280 PHE CG CD2 sing Y N 281 PHE CD1 CE1 sing Y N 282 PHE CD1 HD1 sing N N 283 PHE CD2 CE2 doub Y N 284 PHE CD2 HD2 sing N N 285 PHE CE1 CZ doub Y N 286 PHE CE1 HE1 sing N N 287 PHE CE2 CZ sing Y N 288 PHE CE2 HE2 sing N N 289 PHE CZ HZ sing N N 290 PHE OXT HXT sing N N 291 PRO N CA sing N N 292 PRO N CD sing N N 293 PRO N H sing N N 294 PRO CA C sing N N 295 PRO CA CB sing N N 296 PRO CA HA sing N N 297 PRO C O doub N N 298 PRO C OXT sing N N 299 PRO CB CG sing N N 300 PRO CB HB2 sing N N 301 PRO CB HB3 sing N N 302 PRO CG CD sing N N 303 PRO CG HG2 sing N N 304 PRO CG HG3 sing N N 305 PRO CD HD2 sing N N 306 PRO CD HD3 sing N N 307 PRO OXT HXT sing N N 308 SER N CA sing N N 309 SER N H sing N N 310 SER N H2 sing N N 311 SER CA C sing N N 312 SER CA CB sing N N 313 SER CA HA sing N N 314 SER C O doub N N 315 SER C OXT sing N N 316 SER CB OG sing N N 317 SER CB HB2 sing N N 318 SER CB HB3 sing N N 319 SER OG HG sing N N 320 SER OXT HXT sing N N 321 THR N CA sing N N 322 THR N H sing N N 323 THR N H2 sing N N 324 THR CA C sing N N 325 THR CA CB sing N N 326 THR CA HA sing N N 327 THR C O doub N N 328 THR C OXT sing N N 329 THR CB OG1 sing N N 330 THR CB CG2 sing N N 331 THR CB HB sing N N 332 THR OG1 HG1 sing N N 333 THR CG2 HG21 sing N N 334 THR CG2 HG22 sing N N 335 THR CG2 HG23 sing N N 336 THR OXT HXT sing N N 337 TRP N CA sing N N 338 TRP N H sing N N 339 TRP N H2 sing N N 340 TRP CA C sing N N 341 TRP CA CB sing N N 342 TRP CA HA sing N N 343 TRP C O doub N N 344 TRP C OXT sing N N 345 TRP CB CG sing N N 346 TRP CB HB2 sing N N 347 TRP CB HB3 sing N N 348 TRP CG CD1 doub Y N 349 TRP CG CD2 sing Y N 350 TRP CD1 NE1 sing Y N 351 TRP CD1 HD1 sing N N 352 TRP CD2 CE2 doub Y N 353 TRP CD2 CE3 sing Y N 354 TRP NE1 CE2 sing Y N 355 TRP NE1 HE1 sing N N 356 TRP CE2 CZ2 sing Y N 357 TRP CE3 CZ3 doub Y N 358 TRP CE3 HE3 sing N N 359 TRP CZ2 CH2 doub Y N 360 TRP CZ2 HZ2 sing N N 361 TRP CZ3 CH2 sing Y N 362 TRP CZ3 HZ3 sing N N 363 TRP CH2 HH2 sing N N 364 TRP OXT HXT sing N N 365 TYR N CA sing N N 366 TYR N H sing N N 367 TYR N H2 sing N N 368 TYR CA C sing N N 369 TYR CA CB sing N N 370 TYR CA HA sing N N 371 TYR C O doub N N 372 TYR C OXT sing N N 373 TYR CB CG sing N N 374 TYR CB HB2 sing N N 375 TYR CB HB3 sing N N 376 TYR CG CD1 doub Y N 377 TYR CG CD2 sing Y N 378 TYR CD1 CE1 sing Y N 379 TYR CD1 HD1 sing N N 380 TYR CD2 CE2 doub Y N 381 TYR CD2 HD2 sing N N 382 TYR CE1 CZ doub Y N 383 TYR CE1 HE1 sing N N 384 TYR CE2 CZ sing Y N 385 TYR CE2 HE2 sing N N 386 TYR CZ OH sing N N 387 TYR OH HH sing N N 388 TYR OXT HXT sing N N 389 VAL N CA sing N N 390 VAL N H sing N N 391 VAL N H2 sing N N 392 VAL CA C sing N N 393 VAL CA CB sing N N 394 VAL CA HA sing N N 395 VAL C O doub N N 396 VAL C OXT sing N N 397 VAL CB CG1 sing N N 398 VAL CB CG2 sing N N 399 VAL CB HB sing N N 400 VAL CG1 HG11 sing N N 401 VAL CG1 HG12 sing N N 402 VAL CG1 HG13 sing N N 403 VAL CG2 HG21 sing N N 404 VAL CG2 HG22 sing N N 405 VAL CG2 HG23 sing N N 406 VAL OXT HXT sing N N 407 # _atom_sites.entry_id 1SVI _atom_sites.fract_transf_matrix[1][1] 0.021655 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001534 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014640 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016170 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_