data_1SZL # _entry.id 1SZL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1SZL pdb_00001szl 10.2210/pdb1szl/pdb RCSB RCSB022127 ? ? WWPDB D_1000022127 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1SZL _pdbx_database_status.recvd_initial_deposition_date 2004-04-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tossavainen, H.' 1 'Paakkonen, K.' 2 'Permi, P.' 3 'Kilpelainen, I.' 4 'Guntert, P.' 5 # _citation.id primary _citation.title 'Solution structures of the first and fourth TSR domains of F-spondin' _citation.journal_abbrev Proteins _citation.journal_volume 64 _citation.page_first 665 _citation.page_last 672 _citation.year 2006 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16736493 _citation.pdbx_database_id_DOI 10.1002/prot.21030 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Paakkonen, K.' 1 ? primary 'Tossavainen, H.' 2 ? primary 'Permi, P.' 3 ? primary 'Rakkolainen, H.' 4 ? primary 'Rauvala, H.' 5 ? primary 'Raulo, E.' 6 ? primary 'Kilpelainen, I.' 7 ? primary 'Guntert, P.' 8 ? # _cell.entry_id 1SZL _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SZL _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description F-spondin _entity.formula_weight 6713.506 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'F-spondin TSR domain 1' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSETCIYSNWSPWSACSSSTCEKGKRMRQRMLKAQLDLSVPCPDTQDFQPCMGPGCSDEDG _entity_poly.pdbx_seq_one_letter_code_can GSETCIYSNWSPWSACSSSTCEKGKRMRQRMLKAQLDLSVPCPDTQDFQPCMGPGCSDEDG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 GLU n 1 4 THR n 1 5 CYS n 1 6 ILE n 1 7 TYR n 1 8 SER n 1 9 ASN n 1 10 TRP n 1 11 SER n 1 12 PRO n 1 13 TRP n 1 14 SER n 1 15 ALA n 1 16 CYS n 1 17 SER n 1 18 SER n 1 19 SER n 1 20 THR n 1 21 CYS n 1 22 GLU n 1 23 LYS n 1 24 GLY n 1 25 LYS n 1 26 ARG n 1 27 MET n 1 28 ARG n 1 29 GLN n 1 30 ARG n 1 31 MET n 1 32 LEU n 1 33 LYS n 1 34 ALA n 1 35 GLN n 1 36 LEU n 1 37 ASP n 1 38 LEU n 1 39 SER n 1 40 VAL n 1 41 PRO n 1 42 CYS n 1 43 PRO n 1 44 ASP n 1 45 THR n 1 46 GLN n 1 47 ASP n 1 48 PHE n 1 49 GLN n 1 50 PRO n 1 51 CYS n 1 52 MET n 1 53 GLY n 1 54 PRO n 1 55 GLY n 1 56 CYS n 1 57 SER n 1 58 ASP n 1 59 GLU n 1 60 ASP n 1 61 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Norway rat' _entity_src_gen.gene_src_genus Rattus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rattus norvegicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10116 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SPON1_RAT _struct_ref.pdbx_db_accession P35446 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ETCIYSNWSPWSACSSSTCEKGKRMRQRMLKAQLDLSVPCPDTQDFQPCMGPGCSDEDG _struct_ref.pdbx_align_begin 441 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1SZL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 61 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P35446 _struct_ref_seq.db_align_beg 441 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 499 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 441 _struct_ref_seq.pdbx_auth_seq_align_end 499 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1SZL GLY A 1 ? UNP P35446 ? ? 'cloning artifact' 439 1 1 1SZL SER A 2 ? UNP P35446 ? ? 'cloning artifact' 440 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 3 1 SCT-HMSQC-HA 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 283 _pdbx_nmr_exptl_sample_conditions.pressure AMBIENT _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1mM F-spondin TSR1 U-13C U-15N, 20mM bisTris buffer' _pdbx_nmr_sample_details.solvent_system '95% H2O, 5% D20' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.type 1 INOVA Varian 600 ? 2 INOVA Varian 800 ? # _pdbx_nmr_refine.entry_id 1SZL _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details 'structures are based on a total of 1037 constraints, 994 are NOE-derived distance constraints and 43 phi angle constraints' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1SZL _pdbx_nmr_details.text 'The structures were calculated using automated NOE assignment with the program Cyana.' # _pdbx_nmr_ensemble.entry_id 1SZL _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1SZL _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal processing VNMR '6.1 C' 'Varian Inc.' 1 'data analysis' Sparky 3.1 'Goddard, T.D. and Kneller, D.G.' 2 'structure solution' CYANA 2.0.30 'Guntert, P. et al.' 3 refinement OPALp 1.3 'Koradi, R. et al.' 4 # _exptl.entry_id 1SZL _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1SZL _struct.title 'F-spondin TSR domain 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1SZL _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text 'F-spondin, TSR, CELL ADHESION' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 42 SG ? ? A CYS 443 A CYS 480 1_555 ? ? ? ? ? ? ? 2.022 ? ? disulf2 disulf ? ? A CYS 16 SG ? ? ? 1_555 A CYS 51 SG ? ? A CYS 454 A CYS 489 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf3 disulf ? ? A CYS 21 SG ? ? ? 1_555 A CYS 56 SG ? ? A CYS 459 A CYS 494 1_555 ? ? ? ? ? ? ? 2.035 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS A 5 ? TYR A 7 ? CYS A 443 TYR A 445 A 2 LEU A 32 ? GLN A 35 ? LEU A 470 GLN A 473 B 1 GLY A 24 ? LYS A 25 ? GLY A 462 LYS A 463 B 2 PRO A 50 ? CYS A 51 ? PRO A 488 CYS A 489 C 1 ARG A 28 ? GLN A 29 ? ARG A 466 GLN A 467 C 2 GLN A 46 ? ASP A 47 ? GLN A 484 ASP A 485 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 6 ? N ILE A 444 O ALA A 34 ? O ALA A 472 B 1 2 N GLY A 24 ? N GLY A 462 O CYS A 51 ? O CYS A 489 C 1 2 N ARG A 28 ? N ARG A 466 O ASP A 47 ? O ASP A 485 # _database_PDB_matrix.entry_id 1SZL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1SZL _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 439 439 GLY GLY A . n A 1 2 SER 2 440 440 SER SER A . n A 1 3 GLU 3 441 441 GLU GLU A . n A 1 4 THR 4 442 442 THR THR A . n A 1 5 CYS 5 443 443 CYS CYS A . n A 1 6 ILE 6 444 444 ILE ILE A . n A 1 7 TYR 7 445 445 TYR TYR A . n A 1 8 SER 8 446 446 SER SER A . n A 1 9 ASN 9 447 447 ASN ASN A . n A 1 10 TRP 10 448 448 TRP TRP A . n A 1 11 SER 11 449 449 SER SER A . n A 1 12 PRO 12 450 450 PRO PRO A . n A 1 13 TRP 13 451 451 TRP TRP A . n A 1 14 SER 14 452 452 SER SER A . n A 1 15 ALA 15 453 453 ALA ALA A . n A 1 16 CYS 16 454 454 CYS CYS A . n A 1 17 SER 17 455 455 SER SER A . n A 1 18 SER 18 456 456 SER SER A . n A 1 19 SER 19 457 457 SER SER A . n A 1 20 THR 20 458 458 THR THR A . n A 1 21 CYS 21 459 459 CYS CYS A . n A 1 22 GLU 22 460 460 GLU GLU A . n A 1 23 LYS 23 461 461 LYS LYS A . n A 1 24 GLY 24 462 462 GLY GLY A . n A 1 25 LYS 25 463 463 LYS LYS A . n A 1 26 ARG 26 464 464 ARG ARG A . n A 1 27 MET 27 465 465 MET MET A . n A 1 28 ARG 28 466 466 ARG ARG A . n A 1 29 GLN 29 467 467 GLN GLN A . n A 1 30 ARG 30 468 468 ARG ARG A . n A 1 31 MET 31 469 469 MET MET A . n A 1 32 LEU 32 470 470 LEU LEU A . n A 1 33 LYS 33 471 471 LYS LYS A . n A 1 34 ALA 34 472 472 ALA ALA A . n A 1 35 GLN 35 473 473 GLN GLN A . n A 1 36 LEU 36 474 474 LEU LEU A . n A 1 37 ASP 37 475 475 ASP ASP A . n A 1 38 LEU 38 476 476 LEU LEU A . n A 1 39 SER 39 477 477 SER SER A . n A 1 40 VAL 40 478 478 VAL VAL A . n A 1 41 PRO 41 479 479 PRO PRO A . n A 1 42 CYS 42 480 480 CYS CYS A . n A 1 43 PRO 43 481 481 PRO PRO A . n A 1 44 ASP 44 482 482 ASP ASP A . n A 1 45 THR 45 483 483 THR THR A . n A 1 46 GLN 46 484 484 GLN GLN A . n A 1 47 ASP 47 485 485 ASP ASP A . n A 1 48 PHE 48 486 486 PHE PHE A . n A 1 49 GLN 49 487 487 GLN GLN A . n A 1 50 PRO 50 488 488 PRO PRO A . n A 1 51 CYS 51 489 489 CYS CYS A . n A 1 52 MET 52 490 490 MET MET A . n A 1 53 GLY 53 491 491 GLY GLY A . n A 1 54 PRO 54 492 492 PRO PRO A . n A 1 55 GLY 55 493 493 GLY GLY A . n A 1 56 CYS 56 494 494 CYS CYS A . n A 1 57 SER 57 495 495 SER SER A . n A 1 58 ASP 58 496 496 ASP ASP A . n A 1 59 GLU 59 497 497 GLU GLU A . n A 1 60 ASP 60 498 498 ASP ASP A . n A 1 61 GLY 61 499 499 GLY GLY A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-04-19 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 18 _pdbx_validate_close_contact.auth_atom_id_1 OD1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 475 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 HG _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 SER _pdbx_validate_close_contact.auth_seq_id_2 477 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.56 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 3 CA A CYS 489 ? ? CB A CYS 489 ? ? SG A CYS 489 ? ? 122.09 114.20 7.89 1.10 N 2 6 CA A CYS 454 ? ? CB A CYS 454 ? ? SG A CYS 454 ? ? 122.79 114.20 8.59 1.10 N 3 13 CA A CYS 459 ? ? CB A CYS 459 ? ? SG A CYS 459 ? ? 121.55 114.20 7.35 1.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 482 ? ? -77.07 30.86 2 2 SER A 452 ? ? -63.96 -78.62 3 2 CYS A 459 ? ? -61.60 12.45 4 2 PRO A 481 ? ? -66.29 4.09 5 2 ASP A 482 ? ? -73.03 27.84 6 2 ASP A 496 ? ? -73.12 24.66 7 3 CYS A 480 ? ? -118.64 79.04 8 3 ASP A 482 ? ? -73.32 38.88 9 3 ASP A 498 ? ? -65.50 6.45 10 4 SER A 440 ? ? -66.00 97.63 11 4 SER A 452 ? ? -73.66 -166.45 12 4 LYS A 471 ? ? -104.60 -60.76 13 4 ASP A 482 ? ? -62.92 53.70 14 4 ASP A 496 ? ? -87.46 49.99 15 4 ASP A 498 ? ? 35.28 41.93 16 5 SER A 440 ? ? -107.61 47.23 17 5 SER A 452 ? ? -79.48 -161.69 18 5 SER A 457 ? ? -76.27 21.46 19 5 PRO A 481 ? ? -68.84 4.19 20 5 ASP A 482 ? ? -71.63 40.09 21 5 ASP A 496 ? ? -56.72 -5.98 22 6 GLU A 441 ? ? -143.24 -36.79 23 6 TRP A 448 ? ? -36.10 133.26 24 6 CYS A 459 ? ? -69.76 1.46 25 6 ASP A 482 ? ? -84.01 48.43 26 7 CYS A 480 ? ? -117.99 71.87 27 7 ASP A 482 ? ? -66.97 14.93 28 7 ASP A 498 ? ? 36.72 59.65 29 8 SER A 440 ? ? -63.47 5.26 30 8 ASP A 482 ? ? -71.23 26.65 31 8 ASP A 498 ? ? 62.99 -28.27 32 9 GLU A 441 ? ? -140.49 -44.32 33 9 TRP A 448 ? ? -37.25 119.94 34 9 CYS A 459 ? ? -66.98 7.57 35 9 ASP A 482 ? ? -74.32 40.31 36 9 SER A 495 ? ? -83.74 45.95 37 9 ASP A 496 ? ? -68.20 0.43 38 10 PRO A 481 ? ? -73.75 31.56 39 11 ASP A 482 ? ? -72.10 28.07 40 11 SER A 495 ? ? 75.46 39.57 41 11 ASP A 498 ? ? 61.62 -2.31 42 12 SER A 452 ? ? -81.35 -159.77 43 12 ASP A 482 ? ? -68.33 19.46 44 12 ASP A 498 ? ? 64.78 -2.91 45 13 SER A 452 ? ? -79.31 -168.98 46 13 PRO A 481 ? ? -68.50 8.65 47 13 ASP A 496 ? ? -66.76 0.61 48 14 THR A 483 ? ? -52.07 -2.96 49 14 ASP A 496 ? ? -80.02 36.49 50 15 ASP A 475 ? ? -103.95 76.23 51 15 PRO A 481 ? ? -63.80 1.62 52 15 THR A 483 ? ? -65.82 13.18 53 15 CYS A 494 ? ? -98.25 -123.15 54 15 GLU A 497 ? ? 36.50 29.99 55 16 SER A 452 ? ? -72.66 -75.59 56 16 CYS A 459 ? ? -58.22 2.88 57 16 PRO A 481 ? ? -65.82 0.87 58 16 ASP A 482 ? ? -75.21 45.84 59 17 SER A 440 ? ? -140.04 22.97 60 17 CYS A 459 ? ? -67.05 13.51 61 17 CYS A 480 ? ? -119.05 75.38 62 17 THR A 483 ? ? -69.09 12.32 63 17 ASP A 496 ? ? -71.34 32.85 64 17 ASP A 498 ? ? 64.43 -26.11 65 18 SER A 440 ? ? -145.37 30.32 66 18 SER A 452 ? ? -64.99 -83.39 67 18 ARG A 468 ? ? -100.85 -169.12 68 18 PRO A 481 ? ? -65.79 5.88 69 18 CYS A 494 ? ? -111.86 -78.28 70 18 ASP A 496 ? ? -69.76 15.79 71 19 ASP A 482 ? ? -76.87 37.00 72 19 ASP A 496 ? ? -66.17 2.49 73 20 CYS A 459 ? ? -57.66 -2.78 74 20 ASP A 482 ? ? -74.83 33.00 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 TYR A 445 ? ? 0.077 'SIDE CHAIN' 2 2 ARG A 468 ? ? 0.090 'SIDE CHAIN' 3 7 TYR A 445 ? ? 0.069 'SIDE CHAIN' #