HEADER LIPID TRANSPORT 15-APR-04 1T16 TITLE CRYSTAL STRUCTURE OF THE BACTERIAL FATTY ACID TRANSPORTER FADL FROM TITLE 2 ESCHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: LONG-CHAIN FATTY ACID TRANSPORT PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: OUTER MEMBRANE FADL PROTEIN, OUTER MEMBRANE FLP PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: FADL, TTR, B2344; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: C43(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PBAD22 KEYWDS BETA-BARREL, LIPID TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR B.VAN DEN BERG,P.N.BLACK,W.M.CLEMONS JR.,T.A.RAPOPORT REVDAT 3 14-FEB-24 1T16 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 1T16 1 VERSN REVDAT 1 15-JUN-04 1T16 0 JRNL AUTH B.VAN DEN BERG,P.N.BLACK,W.M.CLEMONS JR.,T.A.RAPOPORT JRNL TITL CRYSTAL STRUCTURE OF THE LONG-CHAIN FATTY ACID TRANSPORTER JRNL TITL 2 FADL. JRNL REF SCIENCE V. 304 1506 2004 JRNL REFN ISSN 0036-8075 JRNL PMID 15178802 JRNL DOI 10.1126/SCIENCE.1097524 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 91.9 REMARK 3 NUMBER OF REFLECTIONS : 40152 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.257 REMARK 3 FREE R VALUE : 0.301 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2033 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.72 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 69.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3594 REMARK 3 BIN R VALUE (WORKING SET) : 0.3810 REMARK 3 BIN FREE R VALUE : 0.4140 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 199 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.029 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6626 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 133 REMARK 3 SOLVENT ATOMS : 150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.88000 REMARK 3 B22 (A**2) : -13.11000 REMARK 3 B33 (A**2) : 5.23000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -6.08000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.42 REMARK 3 ESD FROM SIGMAA (A) : 0.49 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.51 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.62 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : CNS BULK SOLVENT MODEL USED REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 65.24 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : LDAO.PAR REMARK 3 PARAMETER FILE 3 : C8E4.PAR REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : ION.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : LDAO.TOP REMARK 3 TOPOLOGY FILE 3 : C8E4.TOP REMARK 3 TOPOLOGY FILE 4 : WATER.TOP REMARK 3 TOPOLOGY FILE 5 : ION.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1T16 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-APR-04. REMARK 100 THE DEPOSITION ID IS D_1000022183. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-FEB-03; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; NSLS REMARK 200 BEAMLINE : 8-BM; X25 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.97; 1.10 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46492 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.490 REMARK 200 RESOLUTION RANGE LOW (A) : 35.120 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, COPPER(II)CHLORIDE, PH 5.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.33200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN B 248 N - CA - C ANGL. DEV. = 19.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 7 73.66 -105.75 REMARK 500 GLU A 20 96.95 -20.94 REMARK 500 ALA A 22 -2.72 -140.45 REMARK 500 THR A 38 30.40 -74.37 REMARK 500 LEU A 104 148.53 -170.79 REMARK 500 GLN A 177 -4.25 -59.20 REMARK 500 LYS A 219 32.28 -95.41 REMARK 500 ASN A 249 -25.68 72.93 REMARK 500 ASP A 284 157.79 176.64 REMARK 500 TYR A 335 -90.50 -62.02 REMARK 500 ASP A 336 -161.58 -124.21 REMARK 500 ALA A 354 63.75 -53.38 REMARK 500 GLN A 355 -0.91 173.25 REMARK 500 PRO A 362 97.50 -64.41 REMARK 500 ASN A 378 52.00 -173.74 REMARK 500 LYS A 379 -16.16 60.15 REMARK 500 GLU B 7 63.67 -102.06 REMARK 500 GLU B 20 90.69 -6.62 REMARK 500 ALA B 24 30.75 -140.76 REMARK 500 THR B 38 34.35 -71.71 REMARK 500 ASN B 72 65.64 61.10 REMARK 500 ASP B 110 4.62 -68.07 REMARK 500 ASN B 137 -163.45 -168.27 REMARK 500 ASP B 218 -166.45 -160.41 REMARK 500 LYS B 219 30.20 -94.37 REMARK 500 ASN B 220 -3.44 -140.45 REMARK 500 THR B 258 23.41 -147.01 REMARK 500 GLN B 263 -168.22 -100.43 REMARK 500 TRP B 298 -9.21 -59.52 REMARK 500 TYR B 335 -84.12 -57.29 REMARK 500 ASP B 336 -137.93 -121.18 REMARK 500 ALA B 354 77.51 -59.50 REMARK 500 GLN B 355 7.13 159.78 REMARK 500 PRO B 362 100.00 -56.83 REMARK 500 ASN B 378 50.76 -174.24 REMARK 500 LYS B 379 -11.88 57.02 REMARK 500 HIS B 425 86.69 -36.45 REMARK 500 HIS B 426 -161.87 -78.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 428 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 423 NE2 REMARK 620 2 HIS A 426 NE2 109.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 429 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 424 ND1 REMARK 620 2 HOH A 509 O 99.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 430 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 425 NE2 REMARK 620 2 HIS A 427 NE2 109.6 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 428 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 428 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 429 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 430 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 429 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 430 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 431 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA B 431 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 432 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA B 432 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E B 433 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E B 434 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 433 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1T1L RELATED DB: PDB REMARK 900 THE SAME PROTEIN (FADL) CRYSTALLIZED IN HEXAGONAL CRYSTAL FORM REMARK 900 (P3121) DBREF 1T16 A 1 421 UNP P10384 FADL_ECOLI 28 448 DBREF 1T16 B 1 421 UNP P10384 FADL_ECOLI 28 448 SEQADV 1T16 HIS A 422 UNP P10384 EXPRESSION TAG SEQADV 1T16 HIS A 423 UNP P10384 EXPRESSION TAG SEQADV 1T16 HIS A 424 UNP P10384 EXPRESSION TAG SEQADV 1T16 HIS A 425 UNP P10384 EXPRESSION TAG SEQADV 1T16 HIS A 426 UNP P10384 EXPRESSION TAG SEQADV 1T16 HIS A 427 UNP P10384 EXPRESSION TAG SEQADV 1T16 HIS B 422 UNP P10384 EXPRESSION TAG SEQADV 1T16 HIS B 423 UNP P10384 EXPRESSION TAG SEQADV 1T16 HIS B 424 UNP P10384 EXPRESSION TAG SEQADV 1T16 HIS B 425 UNP P10384 EXPRESSION TAG SEQADV 1T16 HIS B 426 UNP P10384 EXPRESSION TAG SEQADV 1T16 HIS B 427 UNP P10384 EXPRESSION TAG SEQRES 1 A 427 ALA GLY PHE GLN LEU ASN GLU PHE SER SER SER GLY LEU SEQRES 2 A 427 GLY ARG ALA TYR SER GLY GLU GLY ALA ILE ALA ASP ASP SEQRES 3 A 427 ALA GLY ASN VAL SER ARG ASN PRO ALA LEU ILE THR MET SEQRES 4 A 427 PHE ASP ARG PRO THR PHE SER ALA GLY ALA VAL TYR ILE SEQRES 5 A 427 ASP PRO ASP VAL ASN ILE SER GLY THR SER PRO SER GLY SEQRES 6 A 427 ARG SER LEU LYS ALA ASP ASN ILE ALA PRO THR ALA TRP SEQRES 7 A 427 VAL PRO ASN MET HIS PHE VAL ALA PRO ILE ASN ASP GLN SEQRES 8 A 427 PHE GLY TRP GLY ALA SER ILE THR SER ASN TYR GLY LEU SEQRES 9 A 427 ALA THR GLU PHE ASN ASP THR TYR ALA GLY GLY SER VAL SEQRES 10 A 427 GLY GLY THR THR ASP LEU GLU THR MET ASN LEU ASN LEU SEQRES 11 A 427 SER GLY ALA TYR ARG LEU ASN ASN ALA TRP SER PHE GLY SEQRES 12 A 427 LEU GLY PHE ASN ALA VAL TYR ALA ARG ALA LYS ILE GLU SEQRES 13 A 427 ARG PHE ALA GLY ASP LEU GLY GLN LEU VAL ALA GLY GLN SEQRES 14 A 427 ILE MET GLN SER PRO ALA GLY GLN THR GLN GLN GLY GLN SEQRES 15 A 427 ALA LEU ALA ALA THR ALA ASN GLY ILE ASP SER ASN THR SEQRES 16 A 427 LYS ILE ALA HIS LEU ASN GLY ASN GLN TRP GLY PHE GLY SEQRES 17 A 427 TRP ASN ALA GLY ILE LEU TYR GLU LEU ASP LYS ASN ASN SEQRES 18 A 427 ARG TYR ALA LEU THR TYR ARG SER GLU VAL LYS ILE ASP SEQRES 19 A 427 PHE LYS GLY ASN TYR SER SER ASP LEU ASN ARG ALA PHE SEQRES 20 A 427 ASN ASN TYR GLY LEU PRO ILE PRO THR ALA THR GLY GLY SEQRES 21 A 427 ALA THR GLN SER GLY TYR LEU THR LEU ASN LEU PRO GLU SEQRES 22 A 427 MET TRP GLU VAL SER GLY TYR ASN ARG VAL ASP PRO GLN SEQRES 23 A 427 TRP ALA ILE HIS TYR SER LEU ALA TYR THR SER TRP SER SEQRES 24 A 427 GLN PHE GLN GLN LEU LYS ALA THR SER THR SER GLY ASP SEQRES 25 A 427 THR LEU PHE GLN LYS HIS GLU GLY PHE LYS ASP ALA TYR SEQRES 26 A 427 ARG ILE ALA LEU GLY THR THR TYR TYR TYR ASP ASP ASN SEQRES 27 A 427 TRP THR PHE ARG THR GLY ILE ALA PHE ASP ASP SER PRO SEQRES 28 A 427 VAL PRO ALA GLN ASN ARG SER ILE SER ILE PRO ASP GLN SEQRES 29 A 427 ASP ARG PHE TRP LEU SER ALA GLY THR THR TYR ALA PHE SEQRES 30 A 427 ASN LYS ASP ALA SER VAL ASP VAL GLY VAL SER TYR MET SEQRES 31 A 427 HIS GLY GLN SER VAL LYS ILE ASN GLU GLY PRO TYR GLN SEQRES 32 A 427 PHE GLU SER GLU GLY LYS ALA TRP LEU PHE GLY THR ASN SEQRES 33 A 427 PHE ASN TYR ALA PHE HIS HIS HIS HIS HIS HIS SEQRES 1 B 427 ALA GLY PHE GLN LEU ASN GLU PHE SER SER SER GLY LEU SEQRES 2 B 427 GLY ARG ALA TYR SER GLY GLU GLY ALA ILE ALA ASP ASP SEQRES 3 B 427 ALA GLY ASN VAL SER ARG ASN PRO ALA LEU ILE THR MET SEQRES 4 B 427 PHE ASP ARG PRO THR PHE SER ALA GLY ALA VAL TYR ILE SEQRES 5 B 427 ASP PRO ASP VAL ASN ILE SER GLY THR SER PRO SER GLY SEQRES 6 B 427 ARG SER LEU LYS ALA ASP ASN ILE ALA PRO THR ALA TRP SEQRES 7 B 427 VAL PRO ASN MET HIS PHE VAL ALA PRO ILE ASN ASP GLN SEQRES 8 B 427 PHE GLY TRP GLY ALA SER ILE THR SER ASN TYR GLY LEU SEQRES 9 B 427 ALA THR GLU PHE ASN ASP THR TYR ALA GLY GLY SER VAL SEQRES 10 B 427 GLY GLY THR THR ASP LEU GLU THR MET ASN LEU ASN LEU SEQRES 11 B 427 SER GLY ALA TYR ARG LEU ASN ASN ALA TRP SER PHE GLY SEQRES 12 B 427 LEU GLY PHE ASN ALA VAL TYR ALA ARG ALA LYS ILE GLU SEQRES 13 B 427 ARG PHE ALA GLY ASP LEU GLY GLN LEU VAL ALA GLY GLN SEQRES 14 B 427 ILE MET GLN SER PRO ALA GLY GLN THR GLN GLN GLY GLN SEQRES 15 B 427 ALA LEU ALA ALA THR ALA ASN GLY ILE ASP SER ASN THR SEQRES 16 B 427 LYS ILE ALA HIS LEU ASN GLY ASN GLN TRP GLY PHE GLY SEQRES 17 B 427 TRP ASN ALA GLY ILE LEU TYR GLU LEU ASP LYS ASN ASN SEQRES 18 B 427 ARG TYR ALA LEU THR TYR ARG SER GLU VAL LYS ILE ASP SEQRES 19 B 427 PHE LYS GLY ASN TYR SER SER ASP LEU ASN ARG ALA PHE SEQRES 20 B 427 ASN ASN TYR GLY LEU PRO ILE PRO THR ALA THR GLY GLY SEQRES 21 B 427 ALA THR GLN SER GLY TYR LEU THR LEU ASN LEU PRO GLU SEQRES 22 B 427 MET TRP GLU VAL SER GLY TYR ASN ARG VAL ASP PRO GLN SEQRES 23 B 427 TRP ALA ILE HIS TYR SER LEU ALA TYR THR SER TRP SER SEQRES 24 B 427 GLN PHE GLN GLN LEU LYS ALA THR SER THR SER GLY ASP SEQRES 25 B 427 THR LEU PHE GLN LYS HIS GLU GLY PHE LYS ASP ALA TYR SEQRES 26 B 427 ARG ILE ALA LEU GLY THR THR TYR TYR TYR ASP ASP ASN SEQRES 27 B 427 TRP THR PHE ARG THR GLY ILE ALA PHE ASP ASP SER PRO SEQRES 28 B 427 VAL PRO ALA GLN ASN ARG SER ILE SER ILE PRO ASP GLN SEQRES 29 B 427 ASP ARG PHE TRP LEU SER ALA GLY THR THR TYR ALA PHE SEQRES 30 B 427 ASN LYS ASP ALA SER VAL ASP VAL GLY VAL SER TYR MET SEQRES 31 B 427 HIS GLY GLN SER VAL LYS ILE ASN GLU GLY PRO TYR GLN SEQRES 32 B 427 PHE GLU SER GLU GLY LYS ALA TRP LEU PHE GLY THR ASN SEQRES 33 B 427 PHE ASN TYR ALA PHE HIS HIS HIS HIS HIS HIS HET CU A 428 1 HET CU A 429 1 HET CU A 430 1 HET LDA A 431 16 HET LDA A 432 16 HET C8E A 433 21 HET CU B 428 1 HET CU B 429 1 HET CU B 430 1 HET LDA B 431 16 HET LDA B 432 16 HET C8E B 433 21 HET C8E B 434 21 HETNAM CU COPPER (II) ION HETNAM LDA LAURYL DIMETHYLAMINE-N-OXIDE HETNAM C8E (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE FORMUL 3 CU 6(CU 2+) FORMUL 6 LDA 4(C14 H31 N O) FORMUL 8 C8E 3(C16 H34 O5) FORMUL 16 HOH *150(H2 O) HELIX 1 1 SER A 9 ARG A 15 1 7 HELIX 2 2 ASP A 26 ARG A 32 5 7 HELIX 3 3 ASN A 33 PHE A 40 5 8 HELIX 4 4 GLY A 114 GLY A 118 5 5 HELIX 5 5 ASP A 161 SER A 173 1 13 HELIX 6 6 PRO A 174 GLN A 177 5 4 HELIX 7 7 THR A 178 ILE A 191 1 14 HELIX 8 8 ASN A 244 ASN A 248 5 5 HELIX 9 9 TRP A 298 PHE A 301 5 4 HELIX 10 10 SER B 9 ARG B 15 1 7 HELIX 11 11 ASP B 26 ARG B 32 5 7 HELIX 12 12 ASN B 33 PHE B 40 5 8 HELIX 13 13 GLY B 114 GLY B 118 5 5 HELIX 14 14 ASP B 161 SER B 173 1 13 HELIX 15 15 PRO B 174 GLN B 177 5 4 HELIX 16 16 THR B 178 ILE B 191 1 14 HELIX 17 17 ASN B 244 ASN B 248 5 5 HELIX 18 18 TRP B 298 PHE B 301 5 4 SHEET 1 A11 GLN A 263 LEU A 271 0 SHEET 2 A11 VAL A 231 SER A 240 -1 N TYR A 239 O GLN A 263 SHEET 3 A11 LYS A 196 ASP A 218 -1 N ASN A 201 O ASN A 238 SHEET 4 A11 TRP A 140 PHE A 158 -1 N GLY A 145 O ASN A 210 SHEET 5 A11 THR A 120 TYR A 134 -1 N GLU A 124 O ARG A 152 SHEET 6 A11 LEU A 104 GLU A 107 -1 N THR A 106 O THR A 121 SHEET 7 A11 THR A 120 TYR A 134 -1 O THR A 121 N THR A 106 SHEET 8 A11 PHE A 92 THR A 99 -1 N THR A 99 O ASN A 127 SHEET 9 A11 ALA A 77 PRO A 87 -1 N ALA A 86 O TRP A 94 SHEET 10 A11 THR A 44 GLY A 60 -1 N SER A 46 O HIS A 83 SHEET 11 A11 TYR A 402 ALA A 420 -1 O PHE A 413 N TYR A 51 SHEET 1 B 9 VAL A 395 GLU A 399 0 SHEET 2 B 9 TYR A 402 ALA A 420 -1 O SER A 406 N VAL A 395 SHEET 3 B 9 ALA A 381 GLY A 392 -1 N ASP A 384 O ASN A 416 SHEET 4 B 9 ARG A 366 ALA A 376 -1 N THR A 373 O VAL A 385 SHEET 5 B 9 TRP A 339 ASP A 348 -1 N ARG A 342 O GLY A 372 SHEET 6 B 9 ALA A 324 TYR A 333 -1 N TYR A 333 O PHE A 341 SHEET 7 B 9 TRP A 287 THR A 296 -1 N HIS A 290 O GLY A 330 SHEET 8 B 9 MET A 274 ASP A 284 -1 N TRP A 275 O TYR A 295 SHEET 9 B 9 ASN A 221 ARG A 228 -1 N ARG A 228 O MET A 274 SHEET 1 C 2 GLN A 303 THR A 307 0 SHEET 2 C 2 THR A 313 HIS A 318 -1 O LEU A 314 N ALA A 306 SHEET 1 D10 THR B 313 HIS B 318 0 SHEET 2 D10 GLN B 303 SER B 308 -1 N ALA B 306 O LEU B 314 SHEET 3 D10 GLN B 263 LEU B 271 -1 N TYR B 266 O THR B 307 SHEET 4 D10 VAL B 231 SER B 240 -1 N ILE B 233 O LEU B 269 SHEET 5 D10 LYS B 196 ASP B 218 -1 N ASN B 201 O ASN B 238 SHEET 6 D10 ASN B 221 ARG B 228 -1 O TYR B 223 N TYR B 215 SHEET 7 D10 MET B 274 ARG B 282 -1 O MET B 274 N ARG B 228 SHEET 8 D10 TRP B 287 THR B 296 -1 O TYR B 295 N TRP B 275 SHEET 9 D10 ALA B 324 TYR B 333 -1 O GLY B 330 N HIS B 290 SHEET 10 D10 TRP B 339 ASP B 348 -1 O PHE B 341 N TYR B 333 SHEET 1 E12 ARG B 366 ALA B 376 0 SHEET 2 E12 ALA B 381 GLY B 392 -1 O VAL B 383 N TYR B 375 SHEET 3 E12 TYR B 402 ALA B 420 -1 O ASN B 418 N SER B 382 SHEET 4 E12 VAL B 395 GLU B 399 -1 N ILE B 397 O PHE B 404 SHEET 5 E12 TYR B 402 ALA B 420 -1 O PHE B 404 N ILE B 397 SHEET 6 E12 THR B 44 GLY B 60 -1 N TYR B 51 O PHE B 413 SHEET 7 E12 ALA B 77 PRO B 87 -1 O HIS B 83 N SER B 46 SHEET 8 E12 PHE B 92 THR B 99 -1 O TRP B 94 N ALA B 86 SHEET 9 E12 THR B 120 TYR B 134 -1 O SER B 131 N GLY B 95 SHEET 10 E12 LEU B 104 GLU B 107 -1 N THR B 106 O THR B 121 SHEET 11 E12 THR B 120 TYR B 134 -1 O THR B 121 N THR B 106 SHEET 12 E12 PHE B 142 PHE B 158 -1 O ALA B 148 N LEU B 128 LINK NE2 HIS A 423 CU CU A 428 1555 1555 2.14 LINK ND1 HIS A 424 CU CU A 429 1555 1555 1.92 LINK NE2 HIS A 425 CU CU A 430 1555 1555 2.00 LINK NE2 HIS A 426 CU CU A 428 1555 1555 2.15 LINK NE2 HIS A 427 CU CU A 430 1555 1555 2.60 LINK CU CU A 429 O HOH A 509 1555 1555 2.16 LINK NE2 HIS B 424 CU CU B 429 1555 1555 2.46 LINK NE2 HIS B 425 CU CU B 430 1555 1555 2.75 SITE 1 AC1 2 HIS B 423 HIS B 426 SITE 1 AC2 3 ASP A 90 HIS A 423 HIS A 426 SITE 1 AC3 3 HIS A 422 HIS A 424 HOH A 509 SITE 1 AC4 2 HIS A 425 HIS A 427 SITE 1 AC5 2 HIS B 422 HIS B 424 SITE 1 AC6 1 HIS B 425 SITE 1 AC7 11 LEU A 104 THR A 121 ALA A 153 ILE A 155 SITE 2 AC7 11 ARG A 157 ASN A 201 LEU A 304 GLU A 319 SITE 3 AC7 11 SER A 360 ILE A 361 HOH A 519 SITE 1 AC8 13 THR B 121 ALA B 153 ILE B 155 ARG B 157 SITE 2 AC8 13 LEU B 200 ASN B 201 LEU B 304 PHE B 315 SITE 3 AC8 13 LYS B 317 GLU B 319 SER B 360 ILE B 361 SITE 4 AC8 13 HOH B 493 SITE 1 AC9 6 PRO A 54 ALA A 77 PRO A 362 ASP A 363 SITE 2 AC9 6 GLN A 364 ARG A 366 SITE 1 BC1 8 LEU B 5 PRO B 54 ALA B 77 GLY B 103 SITE 2 BC1 8 LEU B 104 ASP B 122 LEU B 123 GLU B 124 SITE 1 BC2 10 SER B 116 LEU B 162 VAL B 166 ILE B 197 SITE 2 BC2 10 PHE B 247 PRO B 253 ILE B 254 PRO B 255 SITE 3 BC2 10 GLN B 316 C8E B 434 SITE 1 BC3 5 THR B 187 ASN B 244 ALA B 246 TYR B 250 SITE 2 BC3 5 C8E B 433 SITE 1 BC4 6 SER A 116 LEU A 162 VAL A 166 ILE A 254 SITE 2 BC4 6 PRO A 255 GLN A 316 CRYST1 100.380 68.664 106.024 90.00 96.37 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009962 0.000000 0.001112 0.00000 SCALE2 0.000000 0.014564 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009490 0.00000