data_1T1M # _entry.id 1T1M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1T1M pdb_00001t1m 10.2210/pdb1t1m/pdb RCSB RCSB022198 ? ? WWPDB D_1000022198 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-06-15 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' em_3d_fitting_list 5 4 'Structure model' em_image_scans 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_em_3d_fitting_list.accession_code' 4 4 'Structure model' '_em_3d_fitting_list.initial_refinement_model_id' 5 4 'Structure model' '_em_3d_fitting_list.source_name' 6 4 'Structure model' '_em_3d_fitting_list.type' # _pdbx_database_status.entry_id 1T1M _pdbx_database_status.status_code REL _pdbx_database_status.recvd_initial_deposition_date 2004-04-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1KC9 'X-ray crystallographic Structure of the 50S ribosomal subunit from D. radiodurans' unspecified PDB 1FJF 'X-ray crystallographic Structure of the 30S ribosomal subunit from T. thermophilus' unspecified PDB 1DD5 'X-ray crystallographic Structure of RRF from Thermotoga maritima' unspecified PDB 1EK8 'X-ray crystallographic Structure of RRF from E. coli' unspecified PDB 1T1O . unspecified EMDB EMD-1077 . 'associated EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Agrawal, R.K.' 1 'Sharma, M.R.' 2 'Kiel, M.C.' 3 'Hirokawa, G.' 4 'Booth, T.M.' 5 'Spahn, C.M.' 6 'Grassucci, R.A.' 7 'Kaji, A.' 8 'Frank, J.' 9 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Visualization of ribosome-recycling factor on the Escherichia coli 70S ribosome: Functional implications' Proc.Natl.Acad.Sci.USA 101 8900 8905 2004 PNASA6 US 0027-8424 0040 ? 15178758 10.1073/pnas.0401904101 1 'High resolution structure of the large ribosomal subunit from a mesophilic eubacterium' 'Cell(Cambridge,Mass.)' 107 679 688 2001 CELLB5 US 0092-8674 0998 ? 11733066 '10.1016/S0092-8674(01)00546-3' 2 'Structure of the 30S ribosomal subunit' Nature 407 327 339 2000 NATUAS UK 0028-0836 0006 ? 11014182 10.1038/35030006 3 'Crystal structure of Thermotoga maritima ribosome recycling factor: a tRNA mimic' Science 286 2349 2352 1999 SCIEAS US 0036-8075 0038 ? ? ? 4 'Crystal structure of the ribosome recycling factor from Escherichia coli' 'Embo J.' 19 2362 2370 2000 EMJODG UK 0261-4189 0897 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Agrawal, R.K.' 1 ? primary 'Sharma, M.R.' 2 ? primary 'Kiel, M.C.' 3 ? primary 'Hirokawa, G.' 4 ? primary 'Booth, T.M.' 5 ? primary 'Spahn, C.M.' 6 ? primary 'Grassucci, R.A.' 7 ? primary 'Kaji, A.' 8 ? primary 'Frank, J.' 9 ? 1 'Harms, J.' 10 ? 1 'Schluenzen, F.' 11 ? 1 'Zarivach, R.' 12 ? 1 'Bashan, A.' 13 ? 1 'Gat, S.' 14 ? 1 'Agmon, I.' 15 ? 1 'Bartels, H.' 16 ? 1 'Franceschi, F.' 17 ? 1 'Yonath, A.' 18 ? 2 'Wimberly, B.T.' 19 ? 2 'Brodersen, D.E.' 20 ? 2 'Clemons Jr., W.M.' 21 ? 2 'Morgan-Warren, R.J.' 22 ? 2 'Carter, A.P.' 23 ? 2 'Vonrhein, C.' 24 ? 2 'Hartsch, T.' 25 ? 2 'Ramakrishnan, V.' 26 ? 3 'Selmer, M.' 27 ? 3 'Al-Karadaghi, S.' 28 ? 3 'Hirokawa, G.' 29 ? 3 'Kaji, A.' 30 ? 3 'Liljas, A.' 31 ? 4 'Kim, K.K.' 32 ? 4 'Min, K.' 33 ? 4 'Suh, S.W.' 34 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'dodecamer fragment of double helix from 23S rRNA' 3852.344 1 ? ? 'Apical loop of Helix 43' 'fitted into the cryo-EM map of the 70S ribosome' 2 polymer nat '42-mer fragment of double helix from 16S rRNA' 13581.124 1 ? ? 'Top portion of helix 44' 'fitted into the cryo-EM map of the 70S ribosome' 3 polymer nat 'ribosome recycling factor' 21548.021 1 ? ? ? 'fitted into the cryo-EM map of the 70S ribosome' # _entity_name_com.entity_id 3 _entity_name_com.name 'Ribosome releasing factor; RRF' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no UGGCUUAGAAGC UGGCUUAGAAGC A ? 2 polyribonucleotide no no GCCCGUCACACCAUGGGAGUAUGACUGGGGUGAAGUCGUAAC GCCCGUCACACCAUGGGAGUAUGACUGGGGUGAAGUCGUAAC B ? 3 'polypeptide(L)' no no ;MVNPFIKEAKEKMKRTLEKIEDELRKMRTGKPSPAILEEIKVDYYGVPTPVNQLATISISEERTLVIKPWDKSVLSLIEK AINASDLGLNPINDGNVIRLVFPSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKEGLIPEDDAKRLENEI QKLTDEFIEKLDEVFEIKKEEIMEF ; ;MVNPFIKEAKEKMKRTLEKIEDELRKMRTGKPSPAILEEIKVDYYGVPTPVNQLATISISEERTLVIKPWDKSVLSLIEK AINASDLGLNPINDGNVIRLVFPSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKEGLIPEDDAKRLENEI QKLTDEFIEKLDEVFEIKKEEIMEF ; C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 U n 1 2 G n 1 3 G n 1 4 C n 1 5 U n 1 6 U n 1 7 A n 1 8 G n 1 9 A n 1 10 A n 1 11 G n 1 12 C n 2 1 G n 2 2 C n 2 3 C n 2 4 C n 2 5 G n 2 6 U n 2 7 C n 2 8 A n 2 9 C n 2 10 A n 2 11 C n 2 12 C n 2 13 A n 2 14 U n 2 15 G n 2 16 G n 2 17 G n 2 18 A n 2 19 G n 2 20 U n 2 21 A n 2 22 U n 2 23 G n 2 24 A n 2 25 C n 2 26 U n 2 27 G n 2 28 G n 2 29 G n 2 30 G n 2 31 U n 2 32 G n 2 33 A n 2 34 A n 2 35 G n 2 36 U n 2 37 C n 2 38 G n 2 39 U n 2 40 A n 2 41 A n 2 42 C n 3 1 MET n 3 2 VAL n 3 3 ASN n 3 4 PRO n 3 5 PHE n 3 6 ILE n 3 7 LYS n 3 8 GLU n 3 9 ALA n 3 10 LYS n 3 11 GLU n 3 12 LYS n 3 13 MET n 3 14 LYS n 3 15 ARG n 3 16 THR n 3 17 LEU n 3 18 GLU n 3 19 LYS n 3 20 ILE n 3 21 GLU n 3 22 ASP n 3 23 GLU n 3 24 LEU n 3 25 ARG n 3 26 LYS n 3 27 MET n 3 28 ARG n 3 29 THR n 3 30 GLY n 3 31 LYS n 3 32 PRO n 3 33 SER n 3 34 PRO n 3 35 ALA n 3 36 ILE n 3 37 LEU n 3 38 GLU n 3 39 GLU n 3 40 ILE n 3 41 LYS n 3 42 VAL n 3 43 ASP n 3 44 TYR n 3 45 TYR n 3 46 GLY n 3 47 VAL n 3 48 PRO n 3 49 THR n 3 50 PRO n 3 51 VAL n 3 52 ASN n 3 53 GLN n 3 54 LEU n 3 55 ALA n 3 56 THR n 3 57 ILE n 3 58 SER n 3 59 ILE n 3 60 SER n 3 61 GLU n 3 62 GLU n 3 63 ARG n 3 64 THR n 3 65 LEU n 3 66 VAL n 3 67 ILE n 3 68 LYS n 3 69 PRO n 3 70 TRP n 3 71 ASP n 3 72 LYS n 3 73 SER n 3 74 VAL n 3 75 LEU n 3 76 SER n 3 77 LEU n 3 78 ILE n 3 79 GLU n 3 80 LYS n 3 81 ALA n 3 82 ILE n 3 83 ASN n 3 84 ALA n 3 85 SER n 3 86 ASP n 3 87 LEU n 3 88 GLY n 3 89 LEU n 3 90 ASN n 3 91 PRO n 3 92 ILE n 3 93 ASN n 3 94 ASP n 3 95 GLY n 3 96 ASN n 3 97 VAL n 3 98 ILE n 3 99 ARG n 3 100 LEU n 3 101 VAL n 3 102 PHE n 3 103 PRO n 3 104 SER n 3 105 PRO n 3 106 THR n 3 107 THR n 3 108 GLU n 3 109 GLN n 3 110 ARG n 3 111 GLU n 3 112 LYS n 3 113 TRP n 3 114 VAL n 3 115 LYS n 3 116 LYS n 3 117 ALA n 3 118 LYS n 3 119 GLU n 3 120 ILE n 3 121 VAL n 3 122 GLU n 3 123 GLU n 3 124 GLY n 3 125 LYS n 3 126 ILE n 3 127 ALA n 3 128 ILE n 3 129 ARG n 3 130 ASN n 3 131 ILE n 3 132 ARG n 3 133 ARG n 3 134 GLU n 3 135 ILE n 3 136 LEU n 3 137 LYS n 3 138 LYS n 3 139 ILE n 3 140 LYS n 3 141 GLU n 3 142 ASP n 3 143 GLN n 3 144 LYS n 3 145 GLU n 3 146 GLY n 3 147 LEU n 3 148 ILE n 3 149 PRO n 3 150 GLU n 3 151 ASP n 3 152 ASP n 3 153 ALA n 3 154 LYS n 3 155 ARG n 3 156 LEU n 3 157 GLU n 3 158 ASN n 3 159 GLU n 3 160 ILE n 3 161 GLN n 3 162 LYS n 3 163 LEU n 3 164 THR n 3 165 ASP n 3 166 GLU n 3 167 PHE n 3 168 ILE n 3 169 GLU n 3 170 LYS n 3 171 LEU n 3 172 ASP n 3 173 GLU n 3 174 VAL n 3 175 PHE n 3 176 GLU n 3 177 ILE n 3 178 LYS n 3 179 LYS n 3 180 GLU n 3 181 GLU n 3 182 ILE n 3 183 MET n 3 184 GLU n 3 185 PHE n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? ? 'Escherichia coli' 562 Escherichia ? MRE600 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? 'Escherichia coli' 562 Escherichia ? MRE600 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample ? ? ? 'Escherichia coli' 562 Escherichia ? MRE600 ? ? ? ? ? ? ? ? ? ? ? ? ? 'sequence taken from Thermotoga maritima' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 U 1 1061 1061 U U A . n A 1 2 G 2 1062 1062 G G A . n A 1 3 G 3 1063 1063 G G A . n A 1 4 C 4 1064 1064 C C A . n A 1 5 U 5 1065 1065 U U A . n A 1 6 U 6 1066 1066 U U A . n A 1 7 A 7 1067 1067 A A A . n A 1 8 G 8 1068 1068 G G A . n A 1 9 A 9 1069 1069 A A A . n A 1 10 A 10 1070 1070 A A A . n A 1 11 G 11 1071 1071 G G A . n A 1 12 C 12 1072 1072 C C A . n B 2 1 G 1 1401 1401 G G B . n B 2 2 C 2 1402 1402 C C B . n B 2 3 C 3 1403 1403 C C B . n B 2 4 C 4 1404 1404 C C B . n B 2 5 G 5 1405 1405 G G B . n B 2 6 U 6 1406 1406 U U B . n B 2 7 C 7 1407 1407 C C B . n B 2 8 A 8 1408 1408 A A B . n B 2 9 C 9 1409 1409 C C B . n B 2 10 A 10 1410 1410 A A B . n B 2 11 C 11 1411 1411 C C B . n B 2 12 C 12 1412 1412 C C B . n B 2 13 A 13 1413 1413 A A B . n B 2 14 U 14 1414 1414 U U B . n B 2 15 G 15 1415 1415 G G B . n B 2 16 G 16 1416 1416 G G B . n B 2 17 G 17 1417 1417 G G B . n B 2 18 A 18 1418 1418 A A B . n B 2 19 G 19 1419 1419 G G B . n B 2 20 U 20 1420 1420 U U B . n B 2 21 A 21 1480 1480 A A B . n B 2 22 U 22 1481 1481 U U B . n B 2 23 G 23 1482 1482 G G B . n B 2 24 A 24 1483 1483 A A B . n B 2 25 C 25 1484 1484 C C B . n B 2 26 U 26 1485 1485 U U B . n B 2 27 G 27 1486 1486 G G B . n B 2 28 G 28 1487 1487 G G B . n B 2 29 G 29 1488 1488 G G B . n B 2 30 G 30 1489 1489 G G B . n B 2 31 U 31 1490 1490 U U B . n B 2 32 G 32 1491 1491 G G B . n B 2 33 A 33 1492 1492 A A B . n B 2 34 A 34 1493 1493 A A B . n B 2 35 G 35 1494 1494 G G B . n B 2 36 U 36 1495 1495 U U B . n B 2 37 C 37 1496 1496 C C B . n B 2 38 G 38 1497 1497 G G B . n B 2 39 U 39 1498 1498 U U B . n B 2 40 A 40 1499 1499 A A B . n B 2 41 A 41 1500 1500 A A B . n B 2 42 C 42 1501 1501 C C B . n C 3 1 MET 1 0 ? ? ? C . n C 3 2 VAL 2 1 1 VAL VAL C . n C 3 3 ASN 3 2 2 ASN ASN C . n C 3 4 PRO 4 3 3 PRO PRO C . n C 3 5 PHE 5 4 4 PHE PHE C . n C 3 6 ILE 6 5 5 ILE ILE C . n C 3 7 LYS 7 6 6 LYS LYS C . n C 3 8 GLU 8 7 7 GLU GLU C . n C 3 9 ALA 9 8 8 ALA ALA C . n C 3 10 LYS 10 9 9 LYS LYS C . n C 3 11 GLU 11 10 10 GLU GLU C . n C 3 12 LYS 12 11 11 LYS LYS C . n C 3 13 MET 13 12 12 MET MET C . n C 3 14 LYS 14 13 13 LYS LYS C . n C 3 15 ARG 15 14 14 ARG ARG C . n C 3 16 THR 16 15 15 THR THR C . n C 3 17 LEU 17 16 16 LEU LEU C . n C 3 18 GLU 18 17 17 GLU GLU C . n C 3 19 LYS 19 18 18 LYS LYS C . n C 3 20 ILE 20 19 19 ILE ILE C . n C 3 21 GLU 21 20 20 GLU GLU C . n C 3 22 ASP 22 21 21 ASP ASP C . n C 3 23 GLU 23 22 22 GLU GLU C . n C 3 24 LEU 24 23 23 LEU LEU C . n C 3 25 ARG 25 24 24 ARG ARG C . n C 3 26 LYS 26 25 25 LYS LYS C . n C 3 27 MET 27 26 26 MET MET C . n C 3 28 ARG 28 27 27 ARG ARG C . n C 3 29 THR 29 28 28 THR THR C . n C 3 30 GLY 30 29 29 GLY GLY C . n C 3 31 LYS 31 30 30 LYS LYS C . n C 3 32 PRO 32 31 31 PRO PRO C . n C 3 33 SER 33 32 32 SER SER C . n C 3 34 PRO 34 33 33 PRO PRO C . n C 3 35 ALA 35 34 34 ALA ALA C . n C 3 36 ILE 36 35 35 ILE ILE C . n C 3 37 LEU 37 36 36 LEU LEU C . n C 3 38 GLU 38 37 37 GLU GLU C . n C 3 39 GLU 39 38 38 GLU GLU C . n C 3 40 ILE 40 39 39 ILE ILE C . n C 3 41 LYS 41 40 40 LYS LYS C . n C 3 42 VAL 42 41 41 VAL VAL C . n C 3 43 ASP 43 42 42 ASP ASP C . n C 3 44 TYR 44 43 43 TYR TYR C . n C 3 45 TYR 45 44 44 TYR TYR C . n C 3 46 GLY 46 45 45 GLY GLY C . n C 3 47 VAL 47 46 46 VAL VAL C . n C 3 48 PRO 48 47 47 PRO PRO C . n C 3 49 THR 49 48 48 THR THR C . n C 3 50 PRO 50 49 49 PRO PRO C . n C 3 51 VAL 51 50 50 VAL VAL C . n C 3 52 ASN 52 51 51 ASN ASN C . n C 3 53 GLN 53 52 52 GLN GLN C . n C 3 54 LEU 54 53 53 LEU LEU C . n C 3 55 ALA 55 54 54 ALA ALA C . n C 3 56 THR 56 55 55 THR THR C . n C 3 57 ILE 57 56 56 ILE ILE C . n C 3 58 SER 58 57 57 SER SER C . n C 3 59 ILE 59 58 58 ILE ILE C . n C 3 60 SER 60 59 59 SER SER C . n C 3 61 GLU 61 60 60 GLU GLU C . n C 3 62 GLU 62 61 61 GLU GLU C . n C 3 63 ARG 63 62 62 ARG ARG C . n C 3 64 THR 64 63 63 THR THR C . n C 3 65 LEU 65 64 64 LEU LEU C . n C 3 66 VAL 66 65 65 VAL VAL C . n C 3 67 ILE 67 66 66 ILE ILE C . n C 3 68 LYS 68 67 67 LYS LYS C . n C 3 69 PRO 69 68 68 PRO PRO C . n C 3 70 TRP 70 69 69 TRP TRP C . n C 3 71 ASP 71 70 70 ASP ASP C . n C 3 72 LYS 72 71 71 LYS LYS C . n C 3 73 SER 73 72 72 SER SER C . n C 3 74 VAL 74 73 73 VAL VAL C . n C 3 75 LEU 75 74 74 LEU LEU C . n C 3 76 SER 76 75 75 SER SER C . n C 3 77 LEU 77 76 76 LEU LEU C . n C 3 78 ILE 78 77 77 ILE ILE C . n C 3 79 GLU 79 78 78 GLU GLU C . n C 3 80 LYS 80 79 79 LYS LYS C . n C 3 81 ALA 81 80 80 ALA ALA C . n C 3 82 ILE 82 81 81 ILE ILE C . n C 3 83 ASN 83 82 82 ASN ASN C . n C 3 84 ALA 84 83 83 ALA ALA C . n C 3 85 SER 85 84 84 SER SER C . n C 3 86 ASP 86 85 85 ASP ASP C . n C 3 87 LEU 87 86 86 LEU LEU C . n C 3 88 GLY 88 87 87 GLY GLY C . n C 3 89 LEU 89 88 88 LEU LEU C . n C 3 90 ASN 90 89 89 ASN ASN C . n C 3 91 PRO 91 90 90 PRO PRO C . n C 3 92 ILE 92 91 91 ILE ILE C . n C 3 93 ASN 93 92 92 ASN ASN C . n C 3 94 ASP 94 93 93 ASP ASP C . n C 3 95 GLY 95 94 94 GLY GLY C . n C 3 96 ASN 96 95 95 ASN ASN C . n C 3 97 VAL 97 96 96 VAL VAL C . n C 3 98 ILE 98 97 97 ILE ILE C . n C 3 99 ARG 99 98 98 ARG ARG C . n C 3 100 LEU 100 99 99 LEU LEU C . n C 3 101 VAL 101 100 100 VAL VAL C . n C 3 102 PHE 102 101 101 PHE PHE C . n C 3 103 PRO 103 102 102 PRO PRO C . n C 3 104 SER 104 103 103 SER SER C . n C 3 105 PRO 105 104 104 PRO PRO C . n C 3 106 THR 106 105 105 THR THR C . n C 3 107 THR 107 106 106 THR THR C . n C 3 108 GLU 108 107 107 GLU GLU C . n C 3 109 GLN 109 108 108 GLN GLN C . n C 3 110 ARG 110 109 109 ARG ARG C . n C 3 111 GLU 111 110 110 GLU GLU C . n C 3 112 LYS 112 111 111 LYS LYS C . n C 3 113 TRP 113 112 112 TRP TRP C . n C 3 114 VAL 114 113 113 VAL VAL C . n C 3 115 LYS 115 114 114 LYS LYS C . n C 3 116 LYS 116 115 115 LYS LYS C . n C 3 117 ALA 117 116 116 ALA ALA C . n C 3 118 LYS 118 117 117 LYS LYS C . n C 3 119 GLU 119 118 118 GLU GLU C . n C 3 120 ILE 120 119 119 ILE ILE C . n C 3 121 VAL 121 120 120 VAL VAL C . n C 3 122 GLU 122 121 121 GLU GLU C . n C 3 123 GLU 123 122 122 GLU GLU C . n C 3 124 GLY 124 123 123 GLY GLY C . n C 3 125 LYS 125 124 124 LYS LYS C . n C 3 126 ILE 126 125 125 ILE ILE C . n C 3 127 ALA 127 126 126 ALA ALA C . n C 3 128 ILE 128 127 127 ILE ILE C . n C 3 129 ARG 129 128 128 ARG ARG C . n C 3 130 ASN 130 129 129 ASN ASN C . n C 3 131 ILE 131 130 130 ILE ILE C . n C 3 132 ARG 132 131 131 ARG ARG C . n C 3 133 ARG 133 132 132 ARG ARG C . n C 3 134 GLU 134 133 133 GLU GLU C . n C 3 135 ILE 135 134 134 ILE ILE C . n C 3 136 LEU 136 135 135 LEU LEU C . n C 3 137 LYS 137 136 136 LYS LYS C . n C 3 138 LYS 138 137 137 LYS LYS C . n C 3 139 ILE 139 138 138 ILE ILE C . n C 3 140 LYS 140 139 139 LYS LYS C . n C 3 141 GLU 141 140 140 GLU GLU C . n C 3 142 ASP 142 141 141 ASP ASP C . n C 3 143 GLN 143 142 142 GLN GLN C . n C 3 144 LYS 144 143 143 LYS LYS C . n C 3 145 GLU 145 144 144 GLU GLU C . n C 3 146 GLY 146 145 145 GLY GLY C . n C 3 147 LEU 147 146 146 LEU LEU C . n C 3 148 ILE 148 147 147 ILE ILE C . n C 3 149 PRO 149 148 148 PRO PRO C . n C 3 150 GLU 150 149 149 GLU GLU C . n C 3 151 ASP 151 150 150 ASP ASP C . n C 3 152 ASP 152 151 151 ASP ASP C . n C 3 153 ALA 153 152 152 ALA ALA C . n C 3 154 LYS 154 153 153 LYS LYS C . n C 3 155 ARG 155 154 154 ARG ARG C . n C 3 156 LEU 156 155 155 LEU LEU C . n C 3 157 GLU 157 156 156 GLU GLU C . n C 3 158 ASN 158 157 157 ASN ASN C . n C 3 159 GLU 159 158 158 GLU GLU C . n C 3 160 ILE 160 159 159 ILE ILE C . n C 3 161 GLN 161 160 160 GLN GLN C . n C 3 162 LYS 162 161 161 LYS LYS C . n C 3 163 LEU 163 162 162 LEU LEU C . n C 3 164 THR 164 163 163 THR THR C . n C 3 165 ASP 165 164 164 ASP ASP C . n C 3 166 GLU 166 165 165 GLU GLU C . n C 3 167 PHE 167 166 166 PHE PHE C . n C 3 168 ILE 168 167 167 ILE ILE C . n C 3 169 GLU 169 168 168 GLU GLU C . n C 3 170 LYS 170 169 169 LYS LYS C . n C 3 171 LEU 171 170 170 LEU LEU C . n C 3 172 ASP 172 171 171 ASP ASP C . n C 3 173 GLU 173 172 172 GLU GLU C . n C 3 174 VAL 174 173 173 VAL VAL C . n C 3 175 PHE 175 174 174 PHE PHE C . n C 3 176 GLU 176 175 175 GLU GLU C . n C 3 177 ILE 177 176 176 ILE ILE C . n C 3 178 LYS 178 177 177 LYS LYS C . n C 3 179 LYS 179 178 178 LYS LYS C . n C 3 180 GLU 180 179 179 GLU GLU C . n C 3 181 GLU 181 180 180 GLU GLU C . n C 3 182 ILE 182 181 181 ILE ILE C . n C 3 183 MET 183 182 182 MET MET C . n C 3 184 GLU 184 183 183 GLU GLU C . n C 3 185 PHE 185 184 184 PHE PHE C . n # _exptl.entry_id 1T1M _exptl.method 'ELECTRON MICROSCOPY' _exptl.crystals_number ? # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 184 _refine_hist.pdbx_number_atoms_nucleic_acid 54 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 238 _refine_hist.d_res_high . _refine_hist.d_res_low . # _struct.entry_id 1T1M _struct.title 'Binding position of ribosome recycling factor (RRF) on the E. coli 70S ribosome' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1T1M _struct_keywords.pdbx_keywords RIBOSOME _struct_keywords.text 'RRF binding position on the ribosome, RIBOSOME' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP P84154_ECOLI P84154 3 1 ? ? 2 PDB 1T1M 1T1M 1 ? ? ? 3 PDB 1T1M 1T1M 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1T1M C 1 ? 185 ? P84154 1 ? 185 ? 0 184 2 2 1T1M A 1 ? 12 ? 1T1M 1061 ? 1072 ? 1061 1072 3 3 1T1M B 1 ? 42 ? 1T1M 1401 ? 1501 ? 1401 1501 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 1T1M _em_3d_fitting.ref_protocol OTHER _em_3d_fitting.ref_space ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details 'METHOD--Cross corelation coefficient based manual fitting in O' _em_3d_fitting.method ? # loop_ _em_3d_fitting_list.3d_fitting_id _em_3d_fitting_list.id _em_3d_fitting_list.pdb_entry_id _em_3d_fitting_list.pdb_chain_id _em_3d_fitting_list.details _em_3d_fitting_list.initial_refinement_model_id _em_3d_fitting_list.chain_id _em_3d_fitting_list.chain_residue_range _em_3d_fitting_list.pdb_chain_residue_range _em_3d_fitting_list.source_name _em_3d_fitting_list.type _em_3d_fitting_list.accession_code 1 1 1KC9 ? ? 1 ? ? ? PDB 'experimental model' 1KC9 1 2 1JFJ ? ? 2 ? ? ? PDB 'experimental model' 1JFJ 1 3 1DD5 ? ? 3 ? ? ? PDB 'experimental model' 1DD5 # _em_3d_reconstruction.entry_id 1T1M _em_3d_reconstruction.id 1 _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.num_particles 51217 _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.method '3D projection matching; conjugate gradients with regularization' _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size 2.82 _em_3d_reconstruction.resolution 12 _em_3d_reconstruction.magnification_calibration TMV _em_3d_reconstruction.details 'SPIDER package' _em_3d_reconstruction.resolution_method ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.algorithm ? # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.pH 7.5 _em_buffer.details ? # _em_entity_assembly.id 1 _em_entity_assembly.name '70S-RRF complex' _em_entity_assembly.type RIBOSOME _em_entity_assembly.parent_id 0 _em_entity_assembly.synonym ? _em_entity_assembly.details ? _em_entity_assembly.oligomeric_details ? # _em_imaging.entry_id 1T1M _em_imaging.id 1 _em_imaging.specimen_id 1 _em_imaging.date 2002-06-01 _em_imaging.temperature 93 _em_imaging.microscope_model 'FEI TECNAI F20' _em_imaging.nominal_defocus_min 1400 _em_imaging.nominal_defocus_max 4400 _em_imaging.tilt_angle_min 0 _em_imaging.tilt_angle_max 0 _em_imaging.nominal_cs 2.0 _em_imaging.mode 'BRIGHT FIELD' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.nominal_magnification 50000 _em_imaging.calibrated_magnification 49696 _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.accelerating_voltage 200 _em_imaging.details ? _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.citation_id ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details 'Quantifoil holley-carbon film grids' _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? _em_sample_support.method ? # _em_vitrification.entry_id 1T1M _em_vitrification.id 1 _em_vitrification.instrument 'HOMEMADE PLUNGER' _em_vitrification.cryogen_name ETHANE _em_vitrification.details 'Rapid-freezing in liquid ethane' _em_vitrification.citation_id ? _em_vitrification.humidity ? _em_vitrification.method ? _em_vitrification.specimen_id 1 _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 1T1M _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' # _em_single_particle_entity.entry_id 1T1M _em_single_particle_entity.id 1 _em_single_particle_entity.point_symmetry C1 _em_single_particle_entity.image_processing_id 1 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id C _pdbx_unobs_or_zero_occ_residues.auth_comp_id MET _pdbx_unobs_or_zero_occ_residues.auth_seq_id 0 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id C _pdbx_unobs_or_zero_occ_residues.label_comp_id MET _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 G OP3 O N N 146 G P P N N 147 G OP1 O N N 148 G OP2 O N N 149 G "O5'" O N N 150 G "C5'" C N N 151 G "C4'" C N R 152 G "O4'" O N N 153 G "C3'" C N S 154 G "O3'" O N N 155 G "C2'" C N R 156 G "O2'" O N N 157 G "C1'" C N R 158 G N9 N Y N 159 G C8 C Y N 160 G N7 N Y N 161 G C5 C Y N 162 G C6 C N N 163 G O6 O N N 164 G N1 N N N 165 G C2 C N N 166 G N2 N N N 167 G N3 N N N 168 G C4 C Y N 169 G HOP3 H N N 170 G HOP2 H N N 171 G "H5'" H N N 172 G "H5''" H N N 173 G "H4'" H N N 174 G "H3'" H N N 175 G "HO3'" H N N 176 G "H2'" H N N 177 G "HO2'" H N N 178 G "H1'" H N N 179 G H8 H N N 180 G H1 H N N 181 G H21 H N N 182 G H22 H N N 183 GLN N N N N 184 GLN CA C N S 185 GLN C C N N 186 GLN O O N N 187 GLN CB C N N 188 GLN CG C N N 189 GLN CD C N N 190 GLN OE1 O N N 191 GLN NE2 N N N 192 GLN OXT O N N 193 GLN H H N N 194 GLN H2 H N N 195 GLN HA H N N 196 GLN HB2 H N N 197 GLN HB3 H N N 198 GLN HG2 H N N 199 GLN HG3 H N N 200 GLN HE21 H N N 201 GLN HE22 H N N 202 GLN HXT H N N 203 GLU N N N N 204 GLU CA C N S 205 GLU C C N N 206 GLU O O N N 207 GLU CB C N N 208 GLU CG C N N 209 GLU CD C N N 210 GLU OE1 O N N 211 GLU OE2 O N N 212 GLU OXT O N N 213 GLU H H N N 214 GLU H2 H N N 215 GLU HA H N N 216 GLU HB2 H N N 217 GLU HB3 H N N 218 GLU HG2 H N N 219 GLU HG3 H N N 220 GLU HE2 H N N 221 GLU HXT H N N 222 GLY N N N N 223 GLY CA C N N 224 GLY C C N N 225 GLY O O N N 226 GLY OXT O N N 227 GLY H H N N 228 GLY H2 H N N 229 GLY HA2 H N N 230 GLY HA3 H N N 231 GLY HXT H N N 232 ILE N N N N 233 ILE CA C N S 234 ILE C C N N 235 ILE O O N N 236 ILE CB C N S 237 ILE CG1 C N N 238 ILE CG2 C N N 239 ILE CD1 C N N 240 ILE OXT O N N 241 ILE H H N N 242 ILE H2 H N N 243 ILE HA H N N 244 ILE HB H N N 245 ILE HG12 H N N 246 ILE HG13 H N N 247 ILE HG21 H N N 248 ILE HG22 H N N 249 ILE HG23 H N N 250 ILE HD11 H N N 251 ILE HD12 H N N 252 ILE HD13 H N N 253 ILE HXT H N N 254 LEU N N N N 255 LEU CA C N S 256 LEU C C N N 257 LEU O O N N 258 LEU CB C N N 259 LEU CG C N N 260 LEU CD1 C N N 261 LEU CD2 C N N 262 LEU OXT O N N 263 LEU H H N N 264 LEU H2 H N N 265 LEU HA H N N 266 LEU HB2 H N N 267 LEU HB3 H N N 268 LEU HG H N N 269 LEU HD11 H N N 270 LEU HD12 H N N 271 LEU HD13 H N N 272 LEU HD21 H N N 273 LEU HD22 H N N 274 LEU HD23 H N N 275 LEU HXT H N N 276 LYS N N N N 277 LYS CA C N S 278 LYS C C N N 279 LYS O O N N 280 LYS CB C N N 281 LYS CG C N N 282 LYS CD C N N 283 LYS CE C N N 284 LYS NZ N N N 285 LYS OXT O N N 286 LYS H H N N 287 LYS H2 H N N 288 LYS HA H N N 289 LYS HB2 H N N 290 LYS HB3 H N N 291 LYS HG2 H N N 292 LYS HG3 H N N 293 LYS HD2 H N N 294 LYS HD3 H N N 295 LYS HE2 H N N 296 LYS HE3 H N N 297 LYS HZ1 H N N 298 LYS HZ2 H N N 299 LYS HZ3 H N N 300 LYS HXT H N N 301 MET N N N N 302 MET CA C N S 303 MET C C N N 304 MET O O N N 305 MET CB C N N 306 MET CG C N N 307 MET SD S N N 308 MET CE C N N 309 MET OXT O N N 310 MET H H N N 311 MET H2 H N N 312 MET HA H N N 313 MET HB2 H N N 314 MET HB3 H N N 315 MET HG2 H N N 316 MET HG3 H N N 317 MET HE1 H N N 318 MET HE2 H N N 319 MET HE3 H N N 320 MET HXT H N N 321 PHE N N N N 322 PHE CA C N S 323 PHE C C N N 324 PHE O O N N 325 PHE CB C N N 326 PHE CG C Y N 327 PHE CD1 C Y N 328 PHE CD2 C Y N 329 PHE CE1 C Y N 330 PHE CE2 C Y N 331 PHE CZ C Y N 332 PHE OXT O N N 333 PHE H H N N 334 PHE H2 H N N 335 PHE HA H N N 336 PHE HB2 H N N 337 PHE HB3 H N N 338 PHE HD1 H N N 339 PHE HD2 H N N 340 PHE HE1 H N N 341 PHE HE2 H N N 342 PHE HZ H N N 343 PHE HXT H N N 344 PRO N N N N 345 PRO CA C N S 346 PRO C C N N 347 PRO O O N N 348 PRO CB C N N 349 PRO CG C N N 350 PRO CD C N N 351 PRO OXT O N N 352 PRO H H N N 353 PRO HA H N N 354 PRO HB2 H N N 355 PRO HB3 H N N 356 PRO HG2 H N N 357 PRO HG3 H N N 358 PRO HD2 H N N 359 PRO HD3 H N N 360 PRO HXT H N N 361 SER N N N N 362 SER CA C N S 363 SER C C N N 364 SER O O N N 365 SER CB C N N 366 SER OG O N N 367 SER OXT O N N 368 SER H H N N 369 SER H2 H N N 370 SER HA H N N 371 SER HB2 H N N 372 SER HB3 H N N 373 SER HG H N N 374 SER HXT H N N 375 THR N N N N 376 THR CA C N S 377 THR C C N N 378 THR O O N N 379 THR CB C N R 380 THR OG1 O N N 381 THR CG2 C N N 382 THR OXT O N N 383 THR H H N N 384 THR H2 H N N 385 THR HA H N N 386 THR HB H N N 387 THR HG1 H N N 388 THR HG21 H N N 389 THR HG22 H N N 390 THR HG23 H N N 391 THR HXT H N N 392 TRP N N N N 393 TRP CA C N S 394 TRP C C N N 395 TRP O O N N 396 TRP CB C N N 397 TRP CG C Y N 398 TRP CD1 C Y N 399 TRP CD2 C Y N 400 TRP NE1 N Y N 401 TRP CE2 C Y N 402 TRP CE3 C Y N 403 TRP CZ2 C Y N 404 TRP CZ3 C Y N 405 TRP CH2 C Y N 406 TRP OXT O N N 407 TRP H H N N 408 TRP H2 H N N 409 TRP HA H N N 410 TRP HB2 H N N 411 TRP HB3 H N N 412 TRP HD1 H N N 413 TRP HE1 H N N 414 TRP HE3 H N N 415 TRP HZ2 H N N 416 TRP HZ3 H N N 417 TRP HH2 H N N 418 TRP HXT H N N 419 TYR N N N N 420 TYR CA C N S 421 TYR C C N N 422 TYR O O N N 423 TYR CB C N N 424 TYR CG C Y N 425 TYR CD1 C Y N 426 TYR CD2 C Y N 427 TYR CE1 C Y N 428 TYR CE2 C Y N 429 TYR CZ C Y N 430 TYR OH O N N 431 TYR OXT O N N 432 TYR H H N N 433 TYR H2 H N N 434 TYR HA H N N 435 TYR HB2 H N N 436 TYR HB3 H N N 437 TYR HD1 H N N 438 TYR HD2 H N N 439 TYR HE1 H N N 440 TYR HE2 H N N 441 TYR HH H N N 442 TYR HXT H N N 443 U OP3 O N N 444 U P P N N 445 U OP1 O N N 446 U OP2 O N N 447 U "O5'" O N N 448 U "C5'" C N N 449 U "C4'" C N R 450 U "O4'" O N N 451 U "C3'" C N S 452 U "O3'" O N N 453 U "C2'" C N R 454 U "O2'" O N N 455 U "C1'" C N R 456 U N1 N N N 457 U C2 C N N 458 U O2 O N N 459 U N3 N N N 460 U C4 C N N 461 U O4 O N N 462 U C5 C N N 463 U C6 C N N 464 U HOP3 H N N 465 U HOP2 H N N 466 U "H5'" H N N 467 U "H5''" H N N 468 U "H4'" H N N 469 U "H3'" H N N 470 U "HO3'" H N N 471 U "H2'" H N N 472 U "HO2'" H N N 473 U "H1'" H N N 474 U H3 H N N 475 U H5 H N N 476 U H6 H N N 477 VAL N N N N 478 VAL CA C N S 479 VAL C C N N 480 VAL O O N N 481 VAL CB C N N 482 VAL CG1 C N N 483 VAL CG2 C N N 484 VAL OXT O N N 485 VAL H H N N 486 VAL H2 H N N 487 VAL HA H N N 488 VAL HB H N N 489 VAL HG11 H N N 490 VAL HG12 H N N 491 VAL HG13 H N N 492 VAL HG21 H N N 493 VAL HG22 H N N 494 VAL HG23 H N N 495 VAL HXT H N N 496 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 G OP3 P sing N N 145 G OP3 HOP3 sing N N 146 G P OP1 doub N N 147 G P OP2 sing N N 148 G P "O5'" sing N N 149 G OP2 HOP2 sing N N 150 G "O5'" "C5'" sing N N 151 G "C5'" "C4'" sing N N 152 G "C5'" "H5'" sing N N 153 G "C5'" "H5''" sing N N 154 G "C4'" "O4'" sing N N 155 G "C4'" "C3'" sing N N 156 G "C4'" "H4'" sing N N 157 G "O4'" "C1'" sing N N 158 G "C3'" "O3'" sing N N 159 G "C3'" "C2'" sing N N 160 G "C3'" "H3'" sing N N 161 G "O3'" "HO3'" sing N N 162 G "C2'" "O2'" sing N N 163 G "C2'" "C1'" sing N N 164 G "C2'" "H2'" sing N N 165 G "O2'" "HO2'" sing N N 166 G "C1'" N9 sing N N 167 G "C1'" "H1'" sing N N 168 G N9 C8 sing Y N 169 G N9 C4 sing Y N 170 G C8 N7 doub Y N 171 G C8 H8 sing N N 172 G N7 C5 sing Y N 173 G C5 C6 sing N N 174 G C5 C4 doub Y N 175 G C6 O6 doub N N 176 G C6 N1 sing N N 177 G N1 C2 sing N N 178 G N1 H1 sing N N 179 G C2 N2 sing N N 180 G C2 N3 doub N N 181 G N2 H21 sing N N 182 G N2 H22 sing N N 183 G N3 C4 sing N N 184 GLN N CA sing N N 185 GLN N H sing N N 186 GLN N H2 sing N N 187 GLN CA C sing N N 188 GLN CA CB sing N N 189 GLN CA HA sing N N 190 GLN C O doub N N 191 GLN C OXT sing N N 192 GLN CB CG sing N N 193 GLN CB HB2 sing N N 194 GLN CB HB3 sing N N 195 GLN CG CD sing N N 196 GLN CG HG2 sing N N 197 GLN CG HG3 sing N N 198 GLN CD OE1 doub N N 199 GLN CD NE2 sing N N 200 GLN NE2 HE21 sing N N 201 GLN NE2 HE22 sing N N 202 GLN OXT HXT sing N N 203 GLU N CA sing N N 204 GLU N H sing N N 205 GLU N H2 sing N N 206 GLU CA C sing N N 207 GLU CA CB sing N N 208 GLU CA HA sing N N 209 GLU C O doub N N 210 GLU C OXT sing N N 211 GLU CB CG sing N N 212 GLU CB HB2 sing N N 213 GLU CB HB3 sing N N 214 GLU CG CD sing N N 215 GLU CG HG2 sing N N 216 GLU CG HG3 sing N N 217 GLU CD OE1 doub N N 218 GLU CD OE2 sing N N 219 GLU OE2 HE2 sing N N 220 GLU OXT HXT sing N N 221 GLY N CA sing N N 222 GLY N H sing N N 223 GLY N H2 sing N N 224 GLY CA C sing N N 225 GLY CA HA2 sing N N 226 GLY CA HA3 sing N N 227 GLY C O doub N N 228 GLY C OXT sing N N 229 GLY OXT HXT sing N N 230 ILE N CA sing N N 231 ILE N H sing N N 232 ILE N H2 sing N N 233 ILE CA C sing N N 234 ILE CA CB sing N N 235 ILE CA HA sing N N 236 ILE C O doub N N 237 ILE C OXT sing N N 238 ILE CB CG1 sing N N 239 ILE CB CG2 sing N N 240 ILE CB HB sing N N 241 ILE CG1 CD1 sing N N 242 ILE CG1 HG12 sing N N 243 ILE CG1 HG13 sing N N 244 ILE CG2 HG21 sing N N 245 ILE CG2 HG22 sing N N 246 ILE CG2 HG23 sing N N 247 ILE CD1 HD11 sing N N 248 ILE CD1 HD12 sing N N 249 ILE CD1 HD13 sing N N 250 ILE OXT HXT sing N N 251 LEU N CA sing N N 252 LEU N H sing N N 253 LEU N H2 sing N N 254 LEU CA C sing N N 255 LEU CA CB sing N N 256 LEU CA HA sing N N 257 LEU C O doub N N 258 LEU C OXT sing N N 259 LEU CB CG sing N N 260 LEU CB HB2 sing N N 261 LEU CB HB3 sing N N 262 LEU CG CD1 sing N N 263 LEU CG CD2 sing N N 264 LEU CG HG sing N N 265 LEU CD1 HD11 sing N N 266 LEU CD1 HD12 sing N N 267 LEU CD1 HD13 sing N N 268 LEU CD2 HD21 sing N N 269 LEU CD2 HD22 sing N N 270 LEU CD2 HD23 sing N N 271 LEU OXT HXT sing N N 272 LYS N CA sing N N 273 LYS N H sing N N 274 LYS N H2 sing N N 275 LYS CA C sing N N 276 LYS CA CB sing N N 277 LYS CA HA sing N N 278 LYS C O doub N N 279 LYS C OXT sing N N 280 LYS CB CG sing N N 281 LYS CB HB2 sing N N 282 LYS CB HB3 sing N N 283 LYS CG CD sing N N 284 LYS CG HG2 sing N N 285 LYS CG HG3 sing N N 286 LYS CD CE sing N N 287 LYS CD HD2 sing N N 288 LYS CD HD3 sing N N 289 LYS CE NZ sing N N 290 LYS CE HE2 sing N N 291 LYS CE HE3 sing N N 292 LYS NZ HZ1 sing N N 293 LYS NZ HZ2 sing N N 294 LYS NZ HZ3 sing N N 295 LYS OXT HXT sing N N 296 MET N CA sing N N 297 MET N H sing N N 298 MET N H2 sing N N 299 MET CA C sing N N 300 MET CA CB sing N N 301 MET CA HA sing N N 302 MET C O doub N N 303 MET C OXT sing N N 304 MET CB CG sing N N 305 MET CB HB2 sing N N 306 MET CB HB3 sing N N 307 MET CG SD sing N N 308 MET CG HG2 sing N N 309 MET CG HG3 sing N N 310 MET SD CE sing N N 311 MET CE HE1 sing N N 312 MET CE HE2 sing N N 313 MET CE HE3 sing N N 314 MET OXT HXT sing N N 315 PHE N CA sing N N 316 PHE N H sing N N 317 PHE N H2 sing N N 318 PHE CA C sing N N 319 PHE CA CB sing N N 320 PHE CA HA sing N N 321 PHE C O doub N N 322 PHE C OXT sing N N 323 PHE CB CG sing N N 324 PHE CB HB2 sing N N 325 PHE CB HB3 sing N N 326 PHE CG CD1 doub Y N 327 PHE CG CD2 sing Y N 328 PHE CD1 CE1 sing Y N 329 PHE CD1 HD1 sing N N 330 PHE CD2 CE2 doub Y N 331 PHE CD2 HD2 sing N N 332 PHE CE1 CZ doub Y N 333 PHE CE1 HE1 sing N N 334 PHE CE2 CZ sing Y N 335 PHE CE2 HE2 sing N N 336 PHE CZ HZ sing N N 337 PHE OXT HXT sing N N 338 PRO N CA sing N N 339 PRO N CD sing N N 340 PRO N H sing N N 341 PRO CA C sing N N 342 PRO CA CB sing N N 343 PRO CA HA sing N N 344 PRO C O doub N N 345 PRO C OXT sing N N 346 PRO CB CG sing N N 347 PRO CB HB2 sing N N 348 PRO CB HB3 sing N N 349 PRO CG CD sing N N 350 PRO CG HG2 sing N N 351 PRO CG HG3 sing N N 352 PRO CD HD2 sing N N 353 PRO CD HD3 sing N N 354 PRO OXT HXT sing N N 355 SER N CA sing N N 356 SER N H sing N N 357 SER N H2 sing N N 358 SER CA C sing N N 359 SER CA CB sing N N 360 SER CA HA sing N N 361 SER C O doub N N 362 SER C OXT sing N N 363 SER CB OG sing N N 364 SER CB HB2 sing N N 365 SER CB HB3 sing N N 366 SER OG HG sing N N 367 SER OXT HXT sing N N 368 THR N CA sing N N 369 THR N H sing N N 370 THR N H2 sing N N 371 THR CA C sing N N 372 THR CA CB sing N N 373 THR CA HA sing N N 374 THR C O doub N N 375 THR C OXT sing N N 376 THR CB OG1 sing N N 377 THR CB CG2 sing N N 378 THR CB HB sing N N 379 THR OG1 HG1 sing N N 380 THR CG2 HG21 sing N N 381 THR CG2 HG22 sing N N 382 THR CG2 HG23 sing N N 383 THR OXT HXT sing N N 384 TRP N CA sing N N 385 TRP N H sing N N 386 TRP N H2 sing N N 387 TRP CA C sing N N 388 TRP CA CB sing N N 389 TRP CA HA sing N N 390 TRP C O doub N N 391 TRP C OXT sing N N 392 TRP CB CG sing N N 393 TRP CB HB2 sing N N 394 TRP CB HB3 sing N N 395 TRP CG CD1 doub Y N 396 TRP CG CD2 sing Y N 397 TRP CD1 NE1 sing Y N 398 TRP CD1 HD1 sing N N 399 TRP CD2 CE2 doub Y N 400 TRP CD2 CE3 sing Y N 401 TRP NE1 CE2 sing Y N 402 TRP NE1 HE1 sing N N 403 TRP CE2 CZ2 sing Y N 404 TRP CE3 CZ3 doub Y N 405 TRP CE3 HE3 sing N N 406 TRP CZ2 CH2 doub Y N 407 TRP CZ2 HZ2 sing N N 408 TRP CZ3 CH2 sing Y N 409 TRP CZ3 HZ3 sing N N 410 TRP CH2 HH2 sing N N 411 TRP OXT HXT sing N N 412 TYR N CA sing N N 413 TYR N H sing N N 414 TYR N H2 sing N N 415 TYR CA C sing N N 416 TYR CA CB sing N N 417 TYR CA HA sing N N 418 TYR C O doub N N 419 TYR C OXT sing N N 420 TYR CB CG sing N N 421 TYR CB HB2 sing N N 422 TYR CB HB3 sing N N 423 TYR CG CD1 doub Y N 424 TYR CG CD2 sing Y N 425 TYR CD1 CE1 sing Y N 426 TYR CD1 HD1 sing N N 427 TYR CD2 CE2 doub Y N 428 TYR CD2 HD2 sing N N 429 TYR CE1 CZ doub Y N 430 TYR CE1 HE1 sing N N 431 TYR CE2 CZ sing Y N 432 TYR CE2 HE2 sing N N 433 TYR CZ OH sing N N 434 TYR OH HH sing N N 435 TYR OXT HXT sing N N 436 U OP3 P sing N N 437 U OP3 HOP3 sing N N 438 U P OP1 doub N N 439 U P OP2 sing N N 440 U P "O5'" sing N N 441 U OP2 HOP2 sing N N 442 U "O5'" "C5'" sing N N 443 U "C5'" "C4'" sing N N 444 U "C5'" "H5'" sing N N 445 U "C5'" "H5''" sing N N 446 U "C4'" "O4'" sing N N 447 U "C4'" "C3'" sing N N 448 U "C4'" "H4'" sing N N 449 U "O4'" "C1'" sing N N 450 U "C3'" "O3'" sing N N 451 U "C3'" "C2'" sing N N 452 U "C3'" "H3'" sing N N 453 U "O3'" "HO3'" sing N N 454 U "C2'" "O2'" sing N N 455 U "C2'" "C1'" sing N N 456 U "C2'" "H2'" sing N N 457 U "O2'" "HO2'" sing N N 458 U "C1'" N1 sing N N 459 U "C1'" "H1'" sing N N 460 U N1 C2 sing N N 461 U N1 C6 sing N N 462 U C2 O2 doub N N 463 U C2 N3 sing N N 464 U N3 C4 sing N N 465 U N3 H3 sing N N 466 U C4 O4 doub N N 467 U C4 C5 sing N N 468 U C5 C6 doub N N 469 U C5 H5 sing N N 470 U C6 H6 sing N N 471 VAL N CA sing N N 472 VAL N H sing N N 473 VAL N H2 sing N N 474 VAL CA C sing N N 475 VAL CA CB sing N N 476 VAL CA HA sing N N 477 VAL C O doub N N 478 VAL C OXT sing N N 479 VAL CB CG1 sing N N 480 VAL CB CG2 sing N N 481 VAL CB HB sing N N 482 VAL CG1 HG11 sing N N 483 VAL CG1 HG12 sing N N 484 VAL CG1 HG13 sing N N 485 VAL CG2 HG21 sing N N 486 VAL CG2 HG22 sing N N 487 VAL CG2 HG23 sing N N 488 VAL OXT HXT sing N N 489 # _em_ctf_correction.id 1 _em_ctf_correction.details 'CTF correction of 3D-maps by Wiener filtration' _em_ctf_correction.type . # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.details ? _em_image_recording.id 1 _em_image_recording.avg_electron_dose_per_image 20 _em_image_recording.film_or_detector_model 'KODAK SO-163 FILM' _em_image_recording.imaging_id 1 _em_image_recording.detector_mode ? _em_image_recording.average_exposure_time ? _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.concentration 32 _em_specimen.vitrification_applied YES _em_specimen.staining_applied NO _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.details ? # loop_ _pdbx_coordinate_model.asym_id _pdbx_coordinate_model.type A 'P ATOMS ONLY' B 'P ATOMS ONLY' C 'CA ATOMS ONLY' # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code 1 'experimental model' PDB 1KC9 2 'experimental model' PDB 1JFJ 3 'experimental model' PDB 1DD5 # _atom_sites.entry_id 1T1M _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C P # loop_