data_1T2R # _entry.id 1T2R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1T2R pdb_00001t2r 10.2210/pdb1t2r/pdb RCSB RCSB022238 ? ? WWPDB D_1000022238 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1t2s . unspecified PDB 1UPO . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1T2R _pdbx_database_status.recvd_initial_deposition_date 2004-04-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lingel, A.' 1 'Simon, B.' 2 'Izaurralde, E.' 3 'Sattler, M.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Nucleic acid 3'-end recognition by the Argonaute2 PAZ domain. ; Nat.Struct.Mol.Biol. 11 576 577 2004 ? US 1545-9993 ? ? 15156196 10.1038/nsmb777 1 'STRUCTURE AND NUCLEIC-ACID BINDING OF THE DROSOPHILA ARGONAUTE 2 PAZ DOMAIN' NATURE 426 465 469 2003 NATUAS UK 0028-0836 0006 ? ? 10.1038/nature02123 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lingel, A.' 1 ? primary 'Simon, B.' 2 ? primary 'Izaurralde, E.' 3 ? primary 'Sattler, M.' 4 ? 1 'Lingel, A.' 5 ? 1 'Simon, B.' 6 ? 1 'Izaurralde, E.' 7 ? 1 'Sattler, M.' 8 ? # _cell.entry_id 1T2R _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1T2R _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(*CP*UP*CP*AP*C)-3'" 1505.960 1 ? ? ? ? 2 polymer man 'Argonaute 2' 13928.974 1 ? ? 'PAZ DOMAIN, RESIDUES 605-723' ? # _entity_name_com.entity_id 2 _entity_name_com.name 'CG7439 PROTEIN' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no CUCAC CUCAC B ? 2 'polypeptide(L)' no no ;GAMAMPMIEYLERFSLKAKINNTTNLDYSRRFLEPFLRGINVVYTPPQSFQSAPRVYRVNGLSRAPASSETFEHDGKKVT IASYFHSRNYPLKFPQLHCLNVGSSIKSILLPIELCSIEEGQA ; ;GAMAMPMIEYLERFSLKAKINNTTNLDYSRRFLEPFLRGINVVYTPPQSFQSAPRVYRVNGLSRAPASSETFEHDGKKVT IASYFHSRNYPLKFPQLHCLNVGSSIKSILLPIELCSIEEGQA ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 U n 1 3 C n 1 4 A n 1 5 C n 2 1 GLY n 2 2 ALA n 2 3 MET n 2 4 ALA n 2 5 MET n 2 6 PRO n 2 7 MET n 2 8 ILE n 2 9 GLU n 2 10 TYR n 2 11 LEU n 2 12 GLU n 2 13 ARG n 2 14 PHE n 2 15 SER n 2 16 LEU n 2 17 LYS n 2 18 ALA n 2 19 LYS n 2 20 ILE n 2 21 ASN n 2 22 ASN n 2 23 THR n 2 24 THR n 2 25 ASN n 2 26 LEU n 2 27 ASP n 2 28 TYR n 2 29 SER n 2 30 ARG n 2 31 ARG n 2 32 PHE n 2 33 LEU n 2 34 GLU n 2 35 PRO n 2 36 PHE n 2 37 LEU n 2 38 ARG n 2 39 GLY n 2 40 ILE n 2 41 ASN n 2 42 VAL n 2 43 VAL n 2 44 TYR n 2 45 THR n 2 46 PRO n 2 47 PRO n 2 48 GLN n 2 49 SER n 2 50 PHE n 2 51 GLN n 2 52 SER n 2 53 ALA n 2 54 PRO n 2 55 ARG n 2 56 VAL n 2 57 TYR n 2 58 ARG n 2 59 VAL n 2 60 ASN n 2 61 GLY n 2 62 LEU n 2 63 SER n 2 64 ARG n 2 65 ALA n 2 66 PRO n 2 67 ALA n 2 68 SER n 2 69 SER n 2 70 GLU n 2 71 THR n 2 72 PHE n 2 73 GLU n 2 74 HIS n 2 75 ASP n 2 76 GLY n 2 77 LYS n 2 78 LYS n 2 79 VAL n 2 80 THR n 2 81 ILE n 2 82 ALA n 2 83 SER n 2 84 TYR n 2 85 PHE n 2 86 HIS n 2 87 SER n 2 88 ARG n 2 89 ASN n 2 90 TYR n 2 91 PRO n 2 92 LEU n 2 93 LYS n 2 94 PHE n 2 95 PRO n 2 96 GLN n 2 97 LEU n 2 98 HIS n 2 99 CYS n 2 100 LEU n 2 101 ASN n 2 102 VAL n 2 103 GLY n 2 104 SER n 2 105 SER n 2 106 ILE n 2 107 LYS n 2 108 SER n 2 109 ILE n 2 110 LEU n 2 111 LEU n 2 112 PRO n 2 113 ILE n 2 114 GLU n 2 115 LEU n 2 116 CYS n 2 117 SER n 2 118 ILE n 2 119 GLU n 2 120 GLU n 2 121 GLY n 2 122 GLN n 2 123 ALA n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'fruit fly' _entity_src_gen.gene_src_genus Drosophila _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Drosophila melanogaster' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7227 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PETM60 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP AGO2_DROME Q9VUQ5 2 ;MPMIEYLERFSLKAKINNTTNLDYSRRFLEPFLRGINVVYTPPQSFQSAPRVYRVNGLSRAPASSETFEHDGKKVTIASY FHSRNYPLKFPQLHCLNVGSSIKSILLPIELCSIEEGQA ; 605 ? 2 PDB 1T2R 1T2R 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1T2R A 5 ? 123 ? Q9VUQ5 605 ? 723 ? 5 123 2 2 1T2R B 1 ? 5 ? 1T2R 201 ? 205 ? 201 205 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1T2R GLY A 1 ? UNP Q9VUQ5 ? ? 'cloning artifact' 1 1 1 1T2R ALA A 2 ? UNP Q9VUQ5 ? ? 'cloning artifact' 2 2 1 1T2R MET A 3 ? UNP Q9VUQ5 ? ? 'cloning artifact' 3 3 1 1T2R ALA A 4 ? UNP Q9VUQ5 ? ? 'cloning artifact' 4 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 'TRIPLE RESONANCE' 1 2 1 NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 295 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.8 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.2-1.0 MM 15N OR 15N,13C-LABELED PROTEIN, 0.1-2.5 MM UNLABELED DNA, 50 MM SODIUM PHOSPHATE BUFFER, 0.2 MM DTT' _pdbx_nmr_sample_details.solvent_system ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.type 1 DRX Bruker 500 ? 2 DRX Bruker 600 ? 3 DRX Bruker 900 ? # _pdbx_nmr_refine.entry_id 1T2R _pdbx_nmr_refine.method ;molecular dynamics simulated annealing ; _pdbx_nmr_refine.details ;THE EXPERIMENTALLY DETERMINED DISTANCE RESTRAINTS WERE APPLIED IN A MIXED TORSION AND CARTESIA DY NAMICS SIMULATED ANNEALING PROTOCOL. THE FINAL STRUCTURE ENSEMBLE WAS REFINED IN A SHELL OF WATER MOLECULES. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1T2R _pdbx_nmr_ensemble.conformers_calculated_total_number 150 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'lowest energies' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1T2R _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement 'ARIA1.2, CNS1.1' ? 'NILGES, BRUNGER ET AL.' 1 'structure solution' NMRView ? ? 2 'structure solution' ARIA/CNS ? ? 3 # _exptl.entry_id 1T2R _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description 'STRUCTURAL RESTRAINTS WERE DERIVED FROM 13C AND 15N- EDITED AND EDITED FILTERED NOESY EXPERIMENTS' # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1T2R _struct.title ;Structural basis for 3' end recognition of nucleic acids by the Drosophila Argonaute 2 PAZ domain ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1T2R _struct_keywords.pdbx_keywords 'NUCLEIC ACID BINDING PROTEIN/RNA' _struct_keywords.text 'NUCLEIC ACID BINDING PROTEIN, RNA, NUCLEIC ACID BINDING PROTEIN-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MET B 7 ? SER B 15 ? MET A 7 SER A 15 1 ? 9 HELX_P HELX_P2 2 LEU B 26 ? ARG B 31 ? LEU A 26 ARG A 31 1 ? 6 HELX_P HELX_P3 3 LEU B 33 ? ARG B 38 ? LEU A 33 ARG A 38 1 ? 6 HELX_P HELX_P4 4 PRO B 47 ? GLN B 51 ? PRO A 47 GLN A 51 5 ? 5 HELX_P HELX_P5 5 PRO B 66 ? SER B 69 ? PRO A 66 SER A 69 5 ? 4 HELX_P HELX_P6 6 ILE B 81 ? ARG B 88 ? ILE A 81 ARG A 88 1 ? 8 HELX_P HELX_P7 7 PRO B 112 ? GLU B 114 ? PRO A 112 GLU A 114 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA B 4 ? PRO B 6 ? ALA A 4 PRO A 6 A 2 CYS B 116 ? GLU B 119 ? CYS A 116 GLU A 119 A 3 ILE B 40 ? TYR B 44 ? ILE A 40 TYR A 44 A 4 ARG B 55 ? VAL B 59 ? ARG A 55 VAL A 59 B 1 GLY B 61 ? LEU B 62 ? GLY A 61 LEU A 62 B 2 LEU B 100 ? GLY B 103 ? LEU A 100 GLY A 103 B 3 SER B 108 ? LEU B 111 ? SER A 108 LEU A 111 C 1 THR B 71 ? HIS B 74 ? THR A 71 HIS A 74 C 2 LYS B 77 ? THR B 80 ? LYS A 77 THR A 80 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N MET B 5 ? N MET A 5 O ILE B 118 ? O ILE A 118 A 2 3 O SER B 117 ? O SER A 117 N VAL B 43 ? N VAL A 43 A 3 4 N TYR B 44 ? N TYR A 44 O ARG B 55 ? O ARG A 55 B 1 2 N GLY B 61 ? N GLY A 61 O ASN B 101 ? O ASN A 101 B 2 3 N LEU B 100 ? N LEU A 100 O LEU B 111 ? O LEU A 111 C 1 2 N PHE B 72 ? N PHE A 72 O VAL B 79 ? O VAL A 79 # _database_PDB_matrix.entry_id 1T2R _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1T2R _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 201 ? ? ? B . n A 1 2 U 2 202 ? ? ? B . n A 1 3 C 3 203 ? ? ? B . n A 1 4 A 4 204 204 A A B . n A 1 5 C 5 205 205 C C B . n B 2 1 GLY 1 1 1 GLY GLY A . n B 2 2 ALA 2 2 2 ALA ALA A . n B 2 3 MET 3 3 3 MET MET A . n B 2 4 ALA 4 4 4 ALA ALA A . n B 2 5 MET 5 5 5 MET MET A . n B 2 6 PRO 6 6 6 PRO PRO A . n B 2 7 MET 7 7 7 MET MET A . n B 2 8 ILE 8 8 8 ILE ILE A . n B 2 9 GLU 9 9 9 GLU GLU A . n B 2 10 TYR 10 10 10 TYR TYR A . n B 2 11 LEU 11 11 11 LEU LEU A . n B 2 12 GLU 12 12 12 GLU GLU A . n B 2 13 ARG 13 13 13 ARG ARG A . n B 2 14 PHE 14 14 14 PHE PHE A . n B 2 15 SER 15 15 15 SER SER A . n B 2 16 LEU 16 16 16 LEU LEU A . n B 2 17 LYS 17 17 17 LYS LYS A . n B 2 18 ALA 18 18 18 ALA ALA A . n B 2 19 LYS 19 19 19 LYS LYS A . n B 2 20 ILE 20 20 20 ILE ILE A . n B 2 21 ASN 21 21 21 ASN ASN A . n B 2 22 ASN 22 22 22 ASN ASN A . n B 2 23 THR 23 23 23 THR THR A . n B 2 24 THR 24 24 24 THR THR A . n B 2 25 ASN 25 25 25 ASN ASN A . n B 2 26 LEU 26 26 26 LEU LEU A . n B 2 27 ASP 27 27 27 ASP ASP A . n B 2 28 TYR 28 28 28 TYR TYR A . n B 2 29 SER 29 29 29 SER SER A . n B 2 30 ARG 30 30 30 ARG ARG A . n B 2 31 ARG 31 31 31 ARG ARG A . n B 2 32 PHE 32 32 32 PHE PHE A . n B 2 33 LEU 33 33 33 LEU LEU A . n B 2 34 GLU 34 34 34 GLU GLU A . n B 2 35 PRO 35 35 35 PRO PRO A . n B 2 36 PHE 36 36 36 PHE PHE A . n B 2 37 LEU 37 37 37 LEU LEU A . n B 2 38 ARG 38 38 38 ARG ARG A . n B 2 39 GLY 39 39 39 GLY GLY A . n B 2 40 ILE 40 40 40 ILE ILE A . n B 2 41 ASN 41 41 41 ASN ASN A . n B 2 42 VAL 42 42 42 VAL VAL A . n B 2 43 VAL 43 43 43 VAL VAL A . n B 2 44 TYR 44 44 44 TYR TYR A . n B 2 45 THR 45 45 45 THR THR A . n B 2 46 PRO 46 46 46 PRO PRO A . n B 2 47 PRO 47 47 47 PRO PRO A . n B 2 48 GLN 48 48 48 GLN GLN A . n B 2 49 SER 49 49 49 SER SER A . n B 2 50 PHE 50 50 50 PHE PHE A . n B 2 51 GLN 51 51 51 GLN GLN A . n B 2 52 SER 52 52 52 SER SER A . n B 2 53 ALA 53 53 53 ALA ALA A . n B 2 54 PRO 54 54 54 PRO PRO A . n B 2 55 ARG 55 55 55 ARG ARG A . n B 2 56 VAL 56 56 56 VAL VAL A . n B 2 57 TYR 57 57 57 TYR TYR A . n B 2 58 ARG 58 58 58 ARG ARG A . n B 2 59 VAL 59 59 59 VAL VAL A . n B 2 60 ASN 60 60 60 ASN ASN A . n B 2 61 GLY 61 61 61 GLY GLY A . n B 2 62 LEU 62 62 62 LEU LEU A . n B 2 63 SER 63 63 63 SER SER A . n B 2 64 ARG 64 64 64 ARG ARG A . n B 2 65 ALA 65 65 65 ALA ALA A . n B 2 66 PRO 66 66 66 PRO PRO A . n B 2 67 ALA 67 67 67 ALA ALA A . n B 2 68 SER 68 68 68 SER SER A . n B 2 69 SER 69 69 69 SER SER A . n B 2 70 GLU 70 70 70 GLU GLU A . n B 2 71 THR 71 71 71 THR THR A . n B 2 72 PHE 72 72 72 PHE PHE A . n B 2 73 GLU 73 73 73 GLU GLU A . n B 2 74 HIS 74 74 74 HIS HIS A . n B 2 75 ASP 75 75 75 ASP ASP A . n B 2 76 GLY 76 76 76 GLY GLY A . n B 2 77 LYS 77 77 77 LYS LYS A . n B 2 78 LYS 78 78 78 LYS LYS A . n B 2 79 VAL 79 79 79 VAL VAL A . n B 2 80 THR 80 80 80 THR THR A . n B 2 81 ILE 81 81 81 ILE ILE A . n B 2 82 ALA 82 82 82 ALA ALA A . n B 2 83 SER 83 83 83 SER SER A . n B 2 84 TYR 84 84 84 TYR TYR A . n B 2 85 PHE 85 85 85 PHE PHE A . n B 2 86 HIS 86 86 86 HIS HIS A . n B 2 87 SER 87 87 87 SER SER A . n B 2 88 ARG 88 88 88 ARG ARG A . n B 2 89 ASN 89 89 89 ASN ASN A . n B 2 90 TYR 90 90 90 TYR TYR A . n B 2 91 PRO 91 91 91 PRO PRO A . n B 2 92 LEU 92 92 92 LEU LEU A . n B 2 93 LYS 93 93 93 LYS LYS A . n B 2 94 PHE 94 94 94 PHE PHE A . n B 2 95 PRO 95 95 95 PRO PRO A . n B 2 96 GLN 96 96 96 GLN GLN A . n B 2 97 LEU 97 97 97 LEU LEU A . n B 2 98 HIS 98 98 98 HIS HIS A . n B 2 99 CYS 99 99 99 CYS CYS A . n B 2 100 LEU 100 100 100 LEU LEU A . n B 2 101 ASN 101 101 101 ASN ASN A . n B 2 102 VAL 102 102 102 VAL VAL A . n B 2 103 GLY 103 103 103 GLY GLY A . n B 2 104 SER 104 104 104 SER SER A . n B 2 105 SER 105 105 105 SER SER A . n B 2 106 ILE 106 106 106 ILE ILE A . n B 2 107 LYS 107 107 107 LYS LYS A . n B 2 108 SER 108 108 108 SER SER A . n B 2 109 ILE 109 109 109 ILE ILE A . n B 2 110 LEU 110 110 110 LEU LEU A . n B 2 111 LEU 111 111 111 LEU LEU A . n B 2 112 PRO 112 112 112 PRO PRO A . n B 2 113 ILE 113 113 113 ILE ILE A . n B 2 114 GLU 114 114 114 GLU GLU A . n B 2 115 LEU 115 115 115 LEU LEU A . n B 2 116 CYS 116 116 116 CYS CYS A . n B 2 117 SER 117 117 117 SER SER A . n B 2 118 ILE 118 118 118 ILE ILE A . n B 2 119 GLU 119 119 119 GLU GLU A . n B 2 120 GLU 120 120 120 GLU GLU A . n B 2 121 GLY 121 121 121 GLY GLY A . n B 2 122 GLN 122 122 122 GLN GLN A . n B 2 123 ALA 123 123 123 ALA ALA A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-06-01 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ARIA1.2 refinement . ? 1 CNS refinement . ? 2 ARIA refinement 'V. 1.2' ? 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 "O3'" B C 205 ? ? H A LEU 110 ? ? 1.52 2 1 OE1 A GLU 34 ? ? HH12 A ARG 64 ? ? 1.60 3 2 HH A TYR 44 ? ? HD2 A PRO 112 ? ? 1.11 4 2 HD2 A ARG 55 ? ? HH A TYR 57 ? ? 1.32 5 2 "O3'" B C 205 ? ? H A LEU 110 ? ? 1.48 6 4 HH A TYR 44 ? ? HD2 A PRO 112 ? ? 1.33 7 5 HH A TYR 90 ? ? HD12 A LEU 115 ? ? 1.23 8 5 HG2 A ARG 30 ? ? HB2 A HIS 98 ? ? 1.28 9 5 HG3 A ARG 30 ? ? HD13 A LEU 62 ? ? 1.29 10 5 HD2 A LYS 107 ? ? HG22 A ILE 109 ? ? 1.34 11 5 H3 A GLY 1 ? ? OE1 A GLU 119 ? ? 1.60 12 6 HH11 A ARG 55 ? ? HH A TYR 57 ? ? 1.21 13 6 HH A TYR 44 ? ? HD2 A PRO 112 ? ? 1.29 14 7 HG3 A ARG 30 ? ? HD11 A LEU 62 ? ? 1.33 15 8 HH A TYR 44 ? ? HD2 A PRO 112 ? ? 1.24 16 8 HG2 A ARG 30 ? ? HB2 A HIS 98 ? ? 1.35 17 9 HD2 A LYS 107 ? ? HG22 A ILE 109 ? ? 1.23 18 9 HE A ARG 30 ? ? HD11 A LEU 62 ? ? 1.28 19 10 OE2 A GLU 34 ? ? HH12 A ARG 64 ? ? 1.58 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 5 CE1 A TYR 90 ? ? CZ A TYR 90 ? ? 1.556 1.381 0.175 0.013 N 2 5 CZ A TYR 90 ? ? CE2 A TYR 90 ? ? 1.199 1.381 -0.182 0.013 N 3 9 CE1 A TYR 90 ? ? CZ A TYR 90 ? ? 1.473 1.381 0.092 0.013 N 4 9 CZ A TYR 90 ? ? CE2 A TYR 90 ? ? 1.289 1.381 -0.092 0.013 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 3 ? ? -85.02 44.07 2 1 ARG A 38 ? ? -69.50 86.65 3 1 VAL A 102 ? ? -115.70 -166.34 4 2 VAL A 102 ? ? -116.75 -162.38 5 3 ARG A 38 ? ? -66.91 94.59 6 3 VAL A 102 ? ? -123.52 -168.96 7 4 ALA A 18 ? ? -148.37 -151.21 8 4 VAL A 102 ? ? -113.69 -166.00 9 5 MET A 3 ? ? -140.59 30.16 10 5 ALA A 18 ? ? -114.80 -159.73 11 5 VAL A 102 ? ? -126.92 -165.10 12 6 VAL A 102 ? ? -124.87 -166.23 13 7 MET A 3 ? ? -101.73 40.18 14 7 ARG A 38 ? ? -67.37 99.62 15 7 HIS A 98 ? ? 62.54 108.82 16 8 ARG A 38 ? ? -66.61 99.25 17 8 VAL A 102 ? ? -107.42 -162.40 18 10 ARG A 38 ? ? -66.75 93.81 19 10 VAL A 102 ? ? -127.10 -164.19 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B C 201 ? A C 1 2 1 Y 1 B U 202 ? A U 2 3 1 Y 1 B C 203 ? A C 3 4 2 Y 1 B C 201 ? A C 1 5 2 Y 1 B U 202 ? A U 2 6 2 Y 1 B C 203 ? A C 3 7 3 Y 1 B C 201 ? A C 1 8 3 Y 1 B U 202 ? A U 2 9 3 Y 1 B C 203 ? A C 3 10 4 Y 1 B C 201 ? A C 1 11 4 Y 1 B U 202 ? A U 2 12 4 Y 1 B C 203 ? A C 3 13 5 Y 1 B C 201 ? A C 1 14 5 Y 1 B U 202 ? A U 2 15 5 Y 1 B C 203 ? A C 3 16 6 Y 1 B C 201 ? A C 1 17 6 Y 1 B U 202 ? A U 2 18 6 Y 1 B C 203 ? A C 3 19 7 Y 1 B C 201 ? A C 1 20 7 Y 1 B U 202 ? A U 2 21 7 Y 1 B C 203 ? A C 3 22 8 Y 1 B C 201 ? A C 1 23 8 Y 1 B U 202 ? A U 2 24 8 Y 1 B C 203 ? A C 3 25 9 Y 1 B C 201 ? A C 1 26 9 Y 1 B U 202 ? A U 2 27 9 Y 1 B C 203 ? A C 3 28 10 Y 1 B C 201 ? A C 1 29 10 Y 1 B U 202 ? A U 2 30 10 Y 1 B C 203 ? A C 3 #