data_1T39 # _entry.id 1T39 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1T39 pdb_00001t39 10.2210/pdb1t39/pdb NDB PD0542 ? ? RCSB RCSB022256 ? ? WWPDB D_1000022256 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-07-13 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-23 5 'Structure model' 1 4 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref_seq_dif 7 5 'Structure model' pdbx_entry_details 8 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_dist_value' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 6 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 7 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 12 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 13 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 14 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 17 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 19 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1T39 _pdbx_database_status.recvd_initial_deposition_date 2004-04-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1EH6 'Native Human AGT' unspecified PDB 1EH7 'Methylated Human AGT' unspecified PDB 1EH8 'Benzylated Human AGT' unspecified PDB 1T38 'HUMAN O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE BOUND TO DNA CONTAINING O6-METHYLGUANINE' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Daniels, D.S.' 1 'Woo, T.T.' 2 'Luu, K.X.' 3 'Noll, D.M.' 4 'Clarke, N.D.' 5 'Pegg, A.E.' 6 'Tainer, J.A.' 7 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'DNA binding and nucleotide flipping by the human DNA repair protein AGT.' Nat.Struct.Mol.Biol. 11 714 720 2004 ? US 1545-9993 ? ? 15221026 10.1038/nsmb791 1 'Active and alkylated human AGT structures: a novel zinc site, inhibitor and extrahelical base binding' 'Embo J.' 19 1719 1730 2000 EMJODG UK 0261-4189 0897 ? ? 10.1093/emboj/19.7.1719 2 'Conserved structural motifs governing the stoichiometric repair of alkylated DNA by O(6)-alkylguanine-DNA alkyltransferase' Mutat.Res. 460 151 163 2000 ? NE 0027-5107 ? ? ? '10.1016/S0921-8777(00)00024-0' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Daniels, D.S.' 1 ? primary 'Woo, T.T.' 2 ? primary 'Luu, K.X.' 3 ? primary 'Noll, D.M.' 4 ? primary 'Clarke, N.D.' 5 ? primary 'Pegg, A.E.' 6 ? primary 'Tainer, J.A.' 7 ? 1 'Daniels, D.S.' 8 ? 1 'Mol, C.D.' 9 ? 1 'Arvai, A.S.' 10 ? 1 'Kanugula, S.' 11 ? 1 'Pegg, A.E.' 12 ? 1 'Tainer, J.A.' 13 ? 2 'Daniels, D.S.' 14 ? 2 'Tainer, J.A.' 15 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*CP*CP*AP*TP*GP*(E1X)P*CP*TP*AP*GP*TP*A)-3'" 4020.648 2 ? ? ? ? 2 polymer syn "5'-D(*TP*AP*CP*TP*AP*GP*CP*CP*AP*TP*GP*GP*C)-3'" 3951.586 2 ? ? ? ? 3 polymer man 'Methylated-DNA--protein-cysteine methyltransferase' 20355.473 2 2.1.1.63 ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name '6-O- methylguanine-DNA methyltransferase' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DG)(DC)(DC)(DA)(DT)(DG)(E1X)(DC)(DT)(DA)(DG)(DT)(DA)' GCCATGACTAGTA C,E ? 2 polydeoxyribonucleotide no no '(DT)(DA)(DC)(DT)(DA)(DG)(DC)(DC)(DA)(DT)(DG)(DG)(DC)' TACTAGCCATGGC D,F ? 3 'polypeptide(L)' no no ;MRGSHHHHHHGSMDKDCEMKRTTLDSPLGKLELSGCEQGLHEIKLLGKGTSAADAVEVPAPAAVLGGPEPLMQCTAWLNA YFHQPEAIEEFPVPALHHPVFQQESFTRQVLWKLLKVVKFGEVISYQQLAALAGNPKAARAVGGAMRGNPVPILIPCHRV VCSSGAVGNYSGGLAVKEWLLAHEGHRL ; ;MRGSHHHHHHGSMDKDCEMKRTTLDSPLGKLELSGCEQGLHEIKLLGKGTSAADAVEVPAPAAVLGGPEPLMQCTAWLNA YFHQPEAIEEFPVPALHHPVFQQESFTRQVLWKLLKVVKFGEVISYQQLAALAGNPKAARAVGGAMRGNPVPILIPCHRV VCSSGAVGNYSGGLAVKEWLLAHEGHRL ; A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DC n 1 4 DA n 1 5 DT n 1 6 DG n 1 7 E1X n 1 8 DC n 1 9 DT n 1 10 DA n 1 11 DG n 1 12 DT n 1 13 DA n 2 1 DT n 2 2 DA n 2 3 DC n 2 4 DT n 2 5 DA n 2 6 DG n 2 7 DC n 2 8 DC n 2 9 DA n 2 10 DT n 2 11 DG n 2 12 DG n 2 13 DC n 3 1 MET n 3 2 ARG n 3 3 GLY n 3 4 SER n 3 5 HIS n 3 6 HIS n 3 7 HIS n 3 8 HIS n 3 9 HIS n 3 10 HIS n 3 11 GLY n 3 12 SER n 3 13 MET n 3 14 ASP n 3 15 LYS n 3 16 ASP n 3 17 CYS n 3 18 GLU n 3 19 MET n 3 20 LYS n 3 21 ARG n 3 22 THR n 3 23 THR n 3 24 LEU n 3 25 ASP n 3 26 SER n 3 27 PRO n 3 28 LEU n 3 29 GLY n 3 30 LYS n 3 31 LEU n 3 32 GLU n 3 33 LEU n 3 34 SER n 3 35 GLY n 3 36 CYS n 3 37 GLU n 3 38 GLN n 3 39 GLY n 3 40 LEU n 3 41 HIS n 3 42 GLU n 3 43 ILE n 3 44 LYS n 3 45 LEU n 3 46 LEU n 3 47 GLY n 3 48 LYS n 3 49 GLY n 3 50 THR n 3 51 SER n 3 52 ALA n 3 53 ALA n 3 54 ASP n 3 55 ALA n 3 56 VAL n 3 57 GLU n 3 58 VAL n 3 59 PRO n 3 60 ALA n 3 61 PRO n 3 62 ALA n 3 63 ALA n 3 64 VAL n 3 65 LEU n 3 66 GLY n 3 67 GLY n 3 68 PRO n 3 69 GLU n 3 70 PRO n 3 71 LEU n 3 72 MET n 3 73 GLN n 3 74 CYS n 3 75 THR n 3 76 ALA n 3 77 TRP n 3 78 LEU n 3 79 ASN n 3 80 ALA n 3 81 TYR n 3 82 PHE n 3 83 HIS n 3 84 GLN n 3 85 PRO n 3 86 GLU n 3 87 ALA n 3 88 ILE n 3 89 GLU n 3 90 GLU n 3 91 PHE n 3 92 PRO n 3 93 VAL n 3 94 PRO n 3 95 ALA n 3 96 LEU n 3 97 HIS n 3 98 HIS n 3 99 PRO n 3 100 VAL n 3 101 PHE n 3 102 GLN n 3 103 GLN n 3 104 GLU n 3 105 SER n 3 106 PHE n 3 107 THR n 3 108 ARG n 3 109 GLN n 3 110 VAL n 3 111 LEU n 3 112 TRP n 3 113 LYS n 3 114 LEU n 3 115 LEU n 3 116 LYS n 3 117 VAL n 3 118 VAL n 3 119 LYS n 3 120 PHE n 3 121 GLY n 3 122 GLU n 3 123 VAL n 3 124 ILE n 3 125 SER n 3 126 TYR n 3 127 GLN n 3 128 GLN n 3 129 LEU n 3 130 ALA n 3 131 ALA n 3 132 LEU n 3 133 ALA n 3 134 GLY n 3 135 ASN n 3 136 PRO n 3 137 LYS n 3 138 ALA n 3 139 ALA n 3 140 ARG n 3 141 ALA n 3 142 VAL n 3 143 GLY n 3 144 GLY n 3 145 ALA n 3 146 MET n 3 147 ARG n 3 148 GLY n 3 149 ASN n 3 150 PRO n 3 151 VAL n 3 152 PRO n 3 153 ILE n 3 154 LEU n 3 155 ILE n 3 156 PRO n 3 157 CYS n 3 158 HIS n 3 159 ARG n 3 160 VAL n 3 161 VAL n 3 162 CYS n 3 163 SER n 3 164 SER n 3 165 GLY n 3 166 ALA n 3 167 VAL n 3 168 GLY n 3 169 ASN n 3 170 TYR n 3 171 SER n 3 172 GLY n 3 173 GLY n 3 174 LEU n 3 175 ALA n 3 176 VAL n 3 177 LYS n 3 178 GLU n 3 179 TRP n 3 180 LEU n 3 181 LEU n 3 182 ALA n 3 183 HIS n 3 184 GLU n 3 185 GLY n 3 186 HIS n 3 187 ARG n 3 188 LEU n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene MGMT _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain JM109 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pQE30 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 E1X 'DNA linking' n 'PHOSPHORIC ACID MONO-[5-(1-ETHYL-2,6-DIOXO-1,2,3,6-TETRAHYDRO-PURIN-9-YL)-3-HYDROXY-TETRAHYDRO-FURAN-2-YLMETHYL]ESTER' ;N1-ETHYL-2'-DEOXYXANTHOSINE 5'-MONOPHOSPHATE ; 'C12 H17 N4 O8 P' 376.259 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G C . n A 1 2 DC 2 2 2 DC C C . n A 1 3 DC 3 3 3 DC C C . n A 1 4 DA 4 4 4 DA A C . n A 1 5 DT 5 5 5 DT T C . n A 1 6 DG 6 6 6 DG G C . n A 1 7 E1X 7 7 7 E1X E1X C . n A 1 8 DC 8 8 8 DC C C . n A 1 9 DT 9 9 9 DT T C . n A 1 10 DA 10 10 10 DA A C . n A 1 11 DG 11 11 11 DG G C . n A 1 12 DT 12 12 12 DT T C . n A 1 13 DA 13 13 13 DA A C . n B 2 1 DT 1 14 14 DT T D . n B 2 2 DA 2 15 15 DA A D . n B 2 3 DC 3 16 16 DC C D . n B 2 4 DT 4 17 17 DT T D . n B 2 5 DA 5 18 18 DA A D . n B 2 6 DG 6 19 19 DG G D . n B 2 7 DC 7 20 20 DC C D . n B 2 8 DC 8 21 21 DC C D . n B 2 9 DA 9 22 22 DA A D . n B 2 10 DT 10 23 23 DT T D . n B 2 11 DG 11 24 24 DG G D . n B 2 12 DG 12 25 25 DG G D . n B 2 13 DC 13 26 26 DC C D . n C 1 1 DG 1 1 1 DG G E . n C 1 2 DC 2 2 2 DC C E . n C 1 3 DC 3 3 3 DC C E . n C 1 4 DA 4 4 4 DA A E . n C 1 5 DT 5 5 5 DT T E . n C 1 6 DG 6 6 6 DG G E . n C 1 7 E1X 7 7 7 E1X E1X E . n C 1 8 DC 8 8 8 DC C E . n C 1 9 DT 9 9 9 DT T E . n C 1 10 DA 10 10 10 DA A E . n C 1 11 DG 11 11 11 DG G E . n C 1 12 DT 12 12 12 DT T E . n C 1 13 DA 13 13 13 DA A E . n D 2 1 DT 1 14 14 DT T F . n D 2 2 DA 2 15 15 DA A F . n D 2 3 DC 3 16 16 DC C F . n D 2 4 DT 4 17 17 DT T F . n D 2 5 DA 5 18 18 DA A F . n D 2 6 DG 6 19 19 DG G F . n D 2 7 DC 7 20 20 DC C F . n D 2 8 DC 8 21 21 DC C F . n D 2 9 DA 9 22 22 DA A F . n D 2 10 DT 10 23 23 DT T F . n D 2 11 DG 11 24 24 DG G F . n D 2 12 DG 12 25 25 DG G F . n D 2 13 DC 13 26 26 DC C F . n E 3 1 MET 1 -11 ? ? ? A . n E 3 2 ARG 2 -10 ? ? ? A . n E 3 3 GLY 3 -9 ? ? ? A . n E 3 4 SER 4 -8 ? ? ? A . n E 3 5 HIS 5 -7 ? ? ? A . n E 3 6 HIS 6 -6 ? ? ? A . n E 3 7 HIS 7 -5 ? ? ? A . n E 3 8 HIS 8 -4 ? ? ? A . n E 3 9 HIS 9 -3 ? ? ? A . n E 3 10 HIS 10 -2 ? ? ? A . n E 3 11 GLY 11 -1 ? ? ? A . n E 3 12 SER 12 0 ? ? ? A . n E 3 13 MET 13 1 ? ? ? A . n E 3 14 ASP 14 2 ? ? ? A . n E 3 15 LYS 15 3 ? ? ? A . n E 3 16 ASP 16 4 ? ? ? A . n E 3 17 CYS 17 5 5 CYS CYS A . n E 3 18 GLU 18 6 6 GLU GLU A . n E 3 19 MET 19 7 7 MET MET A . n E 3 20 LYS 20 8 8 LYS LYS A . n E 3 21 ARG 21 9 9 ARG ARG A . n E 3 22 THR 22 10 10 THR THR A . n E 3 23 THR 23 11 11 THR THR A . n E 3 24 LEU 24 12 12 LEU LEU A . n E 3 25 ASP 25 13 13 ASP ASP A . n E 3 26 SER 26 14 14 SER SER A . n E 3 27 PRO 27 15 15 PRO PRO A . n E 3 28 LEU 28 16 16 LEU LEU A . n E 3 29 GLY 29 17 17 GLY GLY A . n E 3 30 LYS 30 18 18 LYS LYS A . n E 3 31 LEU 31 19 19 LEU LEU A . n E 3 32 GLU 32 20 20 GLU GLU A . n E 3 33 LEU 33 21 21 LEU LEU A . n E 3 34 SER 34 22 22 SER SER A . n E 3 35 GLY 35 23 23 GLY GLY A . n E 3 36 CYS 36 24 24 CYS CYS A . n E 3 37 GLU 37 25 25 GLU GLU A . n E 3 38 GLN 38 26 26 GLN GLN A . n E 3 39 GLY 39 27 27 GLY GLY A . n E 3 40 LEU 40 28 28 LEU LEU A . n E 3 41 HIS 41 29 29 HIS HIS A . n E 3 42 GLU 42 30 30 GLU GLU A . n E 3 43 ILE 43 31 31 ILE ILE A . n E 3 44 LYS 44 32 32 LYS LYS A . n E 3 45 LEU 45 33 33 LEU LEU A . n E 3 46 LEU 46 34 34 LEU LEU A . n E 3 47 GLY 47 35 35 GLY GLY A . n E 3 48 LYS 48 36 ? ? ? A . n E 3 49 GLY 49 37 ? ? ? A . n E 3 50 THR 50 38 ? ? ? A . n E 3 51 SER 51 39 ? ? ? A . n E 3 52 ALA 52 40 ? ? ? A . n E 3 53 ALA 53 41 ? ? ? A . n E 3 54 ASP 54 42 ? ? ? A . n E 3 55 ALA 55 43 ? ? ? A . n E 3 56 VAL 56 44 ? ? ? A . n E 3 57 GLU 57 45 ? ? ? A . n E 3 58 VAL 58 46 ? ? ? A . n E 3 59 PRO 59 47 ? ? ? A . n E 3 60 ALA 60 48 ? ? ? A . n E 3 61 PRO 61 49 ? ? ? A . n E 3 62 ALA 62 50 ? ? ? A . n E 3 63 ALA 63 51 ? ? ? A . n E 3 64 VAL 64 52 ? ? ? A . n E 3 65 LEU 65 53 ? ? ? A . n E 3 66 GLY 66 54 ? ? ? A . n E 3 67 GLY 67 55 ? ? ? A . n E 3 68 PRO 68 56 56 PRO PRO A . n E 3 69 GLU 69 57 57 GLU GLU A . n E 3 70 PRO 70 58 58 PRO PRO A . n E 3 71 LEU 71 59 59 LEU LEU A . n E 3 72 MET 72 60 60 MET MET A . n E 3 73 GLN 73 61 61 GLN GLN A . n E 3 74 CYS 74 62 62 CYS CYS A . n E 3 75 THR 75 63 63 THR THR A . n E 3 76 ALA 76 64 64 ALA ALA A . n E 3 77 TRP 77 65 65 TRP TRP A . n E 3 78 LEU 78 66 66 LEU LEU A . n E 3 79 ASN 79 67 67 ASN ASN A . n E 3 80 ALA 80 68 68 ALA ALA A . n E 3 81 TYR 81 69 69 TYR TYR A . n E 3 82 PHE 82 70 70 PHE PHE A . n E 3 83 HIS 83 71 71 HIS HIS A . n E 3 84 GLN 84 72 72 GLN GLN A . n E 3 85 PRO 85 73 73 PRO PRO A . n E 3 86 GLU 86 74 74 GLU GLU A . n E 3 87 ALA 87 75 75 ALA ALA A . n E 3 88 ILE 88 76 76 ILE ILE A . n E 3 89 GLU 89 77 77 GLU GLU A . n E 3 90 GLU 90 78 78 GLU GLU A . n E 3 91 PHE 91 79 79 PHE PHE A . n E 3 92 PRO 92 80 80 PRO PRO A . n E 3 93 VAL 93 81 81 VAL VAL A . n E 3 94 PRO 94 82 82 PRO PRO A . n E 3 95 ALA 95 83 83 ALA ALA A . n E 3 96 LEU 96 84 84 LEU LEU A . n E 3 97 HIS 97 85 85 HIS HIS A . n E 3 98 HIS 98 86 86 HIS HIS A . n E 3 99 PRO 99 87 87 PRO PRO A . n E 3 100 VAL 100 88 88 VAL VAL A . n E 3 101 PHE 101 89 89 PHE PHE A . n E 3 102 GLN 102 90 90 GLN GLN A . n E 3 103 GLN 103 91 91 GLN GLN A . n E 3 104 GLU 104 92 92 GLU GLU A . n E 3 105 SER 105 93 93 SER SER A . n E 3 106 PHE 106 94 94 PHE PHE A . n E 3 107 THR 107 95 95 THR THR A . n E 3 108 ARG 108 96 96 ARG ARG A . n E 3 109 GLN 109 97 97 GLN GLN A . n E 3 110 VAL 110 98 98 VAL VAL A . n E 3 111 LEU 111 99 99 LEU LEU A . n E 3 112 TRP 112 100 100 TRP TRP A . n E 3 113 LYS 113 101 101 LYS LYS A . n E 3 114 LEU 114 102 102 LEU LEU A . n E 3 115 LEU 115 103 103 LEU LEU A . n E 3 116 LYS 116 104 104 LYS LYS A . n E 3 117 VAL 117 105 105 VAL VAL A . n E 3 118 VAL 118 106 106 VAL VAL A . n E 3 119 LYS 119 107 107 LYS LYS A . n E 3 120 PHE 120 108 108 PHE PHE A . n E 3 121 GLY 121 109 109 GLY GLY A . n E 3 122 GLU 122 110 110 GLU GLU A . n E 3 123 VAL 123 111 111 VAL VAL A . n E 3 124 ILE 124 112 112 ILE ILE A . n E 3 125 SER 125 113 113 SER SER A . n E 3 126 TYR 126 114 114 TYR TYR A . n E 3 127 GLN 127 115 115 GLN GLN A . n E 3 128 GLN 128 116 116 GLN GLN A . n E 3 129 LEU 129 117 117 LEU LEU A . n E 3 130 ALA 130 118 118 ALA ALA A . n E 3 131 ALA 131 119 119 ALA ALA A . n E 3 132 LEU 132 120 120 LEU LEU A . n E 3 133 ALA 133 121 121 ALA ALA A . n E 3 134 GLY 134 122 122 GLY GLY A . n E 3 135 ASN 135 123 123 ASN ASN A . n E 3 136 PRO 136 124 124 PRO PRO A . n E 3 137 LYS 137 125 125 LYS LYS A . n E 3 138 ALA 138 126 126 ALA ALA A . n E 3 139 ALA 139 127 127 ALA ALA A . n E 3 140 ARG 140 128 128 ARG ARG A . n E 3 141 ALA 141 129 129 ALA ALA A . n E 3 142 VAL 142 130 130 VAL VAL A . n E 3 143 GLY 143 131 131 GLY GLY A . n E 3 144 GLY 144 132 132 GLY GLY A . n E 3 145 ALA 145 133 133 ALA ALA A . n E 3 146 MET 146 134 134 MET MET A . n E 3 147 ARG 147 135 135 ARG ARG A . n E 3 148 GLY 148 136 136 GLY GLY A . n E 3 149 ASN 149 137 137 ASN ASN A . n E 3 150 PRO 150 138 138 PRO PRO A . n E 3 151 VAL 151 139 139 VAL VAL A . n E 3 152 PRO 152 140 140 PRO PRO A . n E 3 153 ILE 153 141 141 ILE ILE A . n E 3 154 LEU 154 142 142 LEU LEU A . n E 3 155 ILE 155 143 143 ILE ILE A . n E 3 156 PRO 156 144 144 PRO PRO A . n E 3 157 CYS 157 145 145 CYS CYS A . n E 3 158 HIS 158 146 146 HIS HIS A . n E 3 159 ARG 159 147 147 ARG ARG A . n E 3 160 VAL 160 148 148 VAL VAL A . n E 3 161 VAL 161 149 149 VAL VAL A . n E 3 162 CYS 162 150 150 CYS CYS A . n E 3 163 SER 163 151 151 SER SER A . n E 3 164 SER 164 152 152 SER SER A . n E 3 165 GLY 165 153 153 GLY GLY A . n E 3 166 ALA 166 154 154 ALA ALA A . n E 3 167 VAL 167 155 155 VAL VAL A . n E 3 168 GLY 168 156 156 GLY GLY A . n E 3 169 ASN 169 157 157 ASN ASN A . n E 3 170 TYR 170 158 158 TYR TYR A . n E 3 171 SER 171 159 159 SER SER A . n E 3 172 GLY 172 160 160 GLY GLY A . n E 3 173 GLY 173 161 161 GLY GLY A . n E 3 174 LEU 174 162 162 LEU LEU A . n E 3 175 ALA 175 163 163 ALA ALA A . n E 3 176 VAL 176 164 164 VAL VAL A . n E 3 177 LYS 177 165 165 LYS LYS A . n E 3 178 GLU 178 166 166 GLU GLU A . n E 3 179 TRP 179 167 167 TRP TRP A . n E 3 180 LEU 180 168 168 LEU LEU A . n E 3 181 LEU 181 169 169 LEU LEU A . n E 3 182 ALA 182 170 170 ALA ALA A . n E 3 183 HIS 183 171 171 HIS HIS A . n E 3 184 GLU 184 172 172 GLU GLU A . n E 3 185 GLY 185 173 173 GLY GLY A . n E 3 186 HIS 186 174 174 HIS HIS A . n E 3 187 ARG 187 175 175 ARG ARG A . n E 3 188 LEU 188 176 ? ? ? A . n F 3 1 MET 1 -11 ? ? ? B . n F 3 2 ARG 2 -10 ? ? ? B . n F 3 3 GLY 3 -9 ? ? ? B . n F 3 4 SER 4 -8 ? ? ? B . n F 3 5 HIS 5 -7 ? ? ? B . n F 3 6 HIS 6 -6 ? ? ? B . n F 3 7 HIS 7 -5 ? ? ? B . n F 3 8 HIS 8 -4 ? ? ? B . n F 3 9 HIS 9 -3 ? ? ? B . n F 3 10 HIS 10 -2 ? ? ? B . n F 3 11 GLY 11 -1 ? ? ? B . n F 3 12 SER 12 0 ? ? ? B . n F 3 13 MET 13 1 ? ? ? B . n F 3 14 ASP 14 2 ? ? ? B . n F 3 15 LYS 15 3 ? ? ? B . n F 3 16 ASP 16 4 ? ? ? B . n F 3 17 CYS 17 5 ? ? ? B . n F 3 18 GLU 18 6 ? ? ? B . n F 3 19 MET 19 7 7 MET MET B . n F 3 20 LYS 20 8 8 LYS LYS B . n F 3 21 ARG 21 9 9 ARG ARG B . n F 3 22 THR 22 10 10 THR THR B . n F 3 23 THR 23 11 11 THR THR B . n F 3 24 LEU 24 12 12 LEU LEU B . n F 3 25 ASP 25 13 13 ASP ASP B . n F 3 26 SER 26 14 14 SER SER B . n F 3 27 PRO 27 15 15 PRO PRO B . n F 3 28 LEU 28 16 16 LEU LEU B . n F 3 29 GLY 29 17 17 GLY GLY B . n F 3 30 LYS 30 18 18 LYS LYS B . n F 3 31 LEU 31 19 19 LEU LEU B . n F 3 32 GLU 32 20 20 GLU GLU B . n F 3 33 LEU 33 21 21 LEU LEU B . n F 3 34 SER 34 22 22 SER SER B . n F 3 35 GLY 35 23 23 GLY GLY B . n F 3 36 CYS 36 24 24 CYS CYS B . n F 3 37 GLU 37 25 25 GLU GLU B . n F 3 38 GLN 38 26 26 GLN GLN B . n F 3 39 GLY 39 27 27 GLY GLY B . n F 3 40 LEU 40 28 28 LEU LEU B . n F 3 41 HIS 41 29 29 HIS HIS B . n F 3 42 GLU 42 30 30 GLU GLU B . n F 3 43 ILE 43 31 31 ILE ILE B . n F 3 44 LYS 44 32 32 LYS LYS B . n F 3 45 LEU 45 33 33 LEU LEU B . n F 3 46 LEU 46 34 34 LEU LEU B . n F 3 47 GLY 47 35 35 GLY GLY B . n F 3 48 LYS 48 36 ? ? ? B . n F 3 49 GLY 49 37 ? ? ? B . n F 3 50 THR 50 38 ? ? ? B . n F 3 51 SER 51 39 ? ? ? B . n F 3 52 ALA 52 40 ? ? ? B . n F 3 53 ALA 53 41 ? ? ? B . n F 3 54 ASP 54 42 ? ? ? B . n F 3 55 ALA 55 43 ? ? ? B . n F 3 56 VAL 56 44 ? ? ? B . n F 3 57 GLU 57 45 ? ? ? B . n F 3 58 VAL 58 46 ? ? ? B . n F 3 59 PRO 59 47 ? ? ? B . n F 3 60 ALA 60 48 ? ? ? B . n F 3 61 PRO 61 49 ? ? ? B . n F 3 62 ALA 62 50 ? ? ? B . n F 3 63 ALA 63 51 ? ? ? B . n F 3 64 VAL 64 52 ? ? ? B . n F 3 65 LEU 65 53 ? ? ? B . n F 3 66 GLY 66 54 ? ? ? B . n F 3 67 GLY 67 55 ? ? ? B . n F 3 68 PRO 68 56 56 PRO PRO B . n F 3 69 GLU 69 57 57 GLU GLU B . n F 3 70 PRO 70 58 58 PRO PRO B . n F 3 71 LEU 71 59 59 LEU LEU B . n F 3 72 MET 72 60 60 MET MET B . n F 3 73 GLN 73 61 61 GLN GLN B . n F 3 74 CYS 74 62 62 CYS CYS B . n F 3 75 THR 75 63 63 THR THR B . n F 3 76 ALA 76 64 64 ALA ALA B . n F 3 77 TRP 77 65 65 TRP TRP B . n F 3 78 LEU 78 66 66 LEU LEU B . n F 3 79 ASN 79 67 67 ASN ASN B . n F 3 80 ALA 80 68 68 ALA ALA B . n F 3 81 TYR 81 69 69 TYR TYR B . n F 3 82 PHE 82 70 70 PHE PHE B . n F 3 83 HIS 83 71 71 HIS HIS B . n F 3 84 GLN 84 72 72 GLN GLN B . n F 3 85 PRO 85 73 73 PRO PRO B . n F 3 86 GLU 86 74 74 GLU GLU B . n F 3 87 ALA 87 75 75 ALA ALA B . n F 3 88 ILE 88 76 76 ILE ILE B . n F 3 89 GLU 89 77 77 GLU GLU B . n F 3 90 GLU 90 78 78 GLU GLU B . n F 3 91 PHE 91 79 79 PHE PHE B . n F 3 92 PRO 92 80 80 PRO PRO B . n F 3 93 VAL 93 81 81 VAL VAL B . n F 3 94 PRO 94 82 82 PRO PRO B . n F 3 95 ALA 95 83 83 ALA ALA B . n F 3 96 LEU 96 84 84 LEU LEU B . n F 3 97 HIS 97 85 85 HIS HIS B . n F 3 98 HIS 98 86 86 HIS HIS B . n F 3 99 PRO 99 87 87 PRO PRO B . n F 3 100 VAL 100 88 88 VAL VAL B . n F 3 101 PHE 101 89 89 PHE PHE B . n F 3 102 GLN 102 90 90 GLN GLN B . n F 3 103 GLN 103 91 91 GLN GLN B . n F 3 104 GLU 104 92 92 GLU GLU B . n F 3 105 SER 105 93 93 SER SER B . n F 3 106 PHE 106 94 94 PHE PHE B . n F 3 107 THR 107 95 95 THR THR B . n F 3 108 ARG 108 96 96 ARG ARG B . n F 3 109 GLN 109 97 97 GLN GLN B . n F 3 110 VAL 110 98 98 VAL VAL B . n F 3 111 LEU 111 99 99 LEU LEU B . n F 3 112 TRP 112 100 100 TRP TRP B . n F 3 113 LYS 113 101 101 LYS LYS B . n F 3 114 LEU 114 102 102 LEU LEU B . n F 3 115 LEU 115 103 103 LEU LEU B . n F 3 116 LYS 116 104 104 LYS LYS B . n F 3 117 VAL 117 105 105 VAL VAL B . n F 3 118 VAL 118 106 106 VAL VAL B . n F 3 119 LYS 119 107 107 LYS LYS B . n F 3 120 PHE 120 108 108 PHE PHE B . n F 3 121 GLY 121 109 109 GLY GLY B . n F 3 122 GLU 122 110 110 GLU GLU B . n F 3 123 VAL 123 111 111 VAL VAL B . n F 3 124 ILE 124 112 112 ILE ILE B . n F 3 125 SER 125 113 113 SER SER B . n F 3 126 TYR 126 114 114 TYR TYR B . n F 3 127 GLN 127 115 115 GLN GLN B . n F 3 128 GLN 128 116 116 GLN GLN B . n F 3 129 LEU 129 117 117 LEU LEU B . n F 3 130 ALA 130 118 118 ALA ALA B . n F 3 131 ALA 131 119 119 ALA ALA B . n F 3 132 LEU 132 120 120 LEU LEU B . n F 3 133 ALA 133 121 121 ALA ALA B . n F 3 134 GLY 134 122 122 GLY GLY B . n F 3 135 ASN 135 123 123 ASN ASN B . n F 3 136 PRO 136 124 124 PRO PRO B . n F 3 137 LYS 137 125 125 LYS LYS B . n F 3 138 ALA 138 126 126 ALA ALA B . n F 3 139 ALA 139 127 127 ALA ALA B . n F 3 140 ARG 140 128 128 ARG ARG B . n F 3 141 ALA 141 129 129 ALA ALA B . n F 3 142 VAL 142 130 130 VAL VAL B . n F 3 143 GLY 143 131 131 GLY GLY B . n F 3 144 GLY 144 132 132 GLY GLY B . n F 3 145 ALA 145 133 133 ALA ALA B . n F 3 146 MET 146 134 134 MET MET B . n F 3 147 ARG 147 135 135 ARG ARG B . n F 3 148 GLY 148 136 136 GLY GLY B . n F 3 149 ASN 149 137 137 ASN ASN B . n F 3 150 PRO 150 138 138 PRO PRO B . n F 3 151 VAL 151 139 139 VAL VAL B . n F 3 152 PRO 152 140 140 PRO PRO B . n F 3 153 ILE 153 141 141 ILE ILE B . n F 3 154 LEU 154 142 142 LEU LEU B . n F 3 155 ILE 155 143 143 ILE ILE B . n F 3 156 PRO 156 144 144 PRO PRO B . n F 3 157 CYS 157 145 145 CYS CYS B . n F 3 158 HIS 158 146 146 HIS HIS B . n F 3 159 ARG 159 147 147 ARG ARG B . n F 3 160 VAL 160 148 148 VAL VAL B . n F 3 161 VAL 161 149 149 VAL VAL B . n F 3 162 CYS 162 150 150 CYS CYS B . n F 3 163 SER 163 151 151 SER SER B . n F 3 164 SER 164 152 152 SER SER B . n F 3 165 GLY 165 153 153 GLY GLY B . n F 3 166 ALA 166 154 154 ALA ALA B . n F 3 167 VAL 167 155 155 VAL VAL B . n F 3 168 GLY 168 156 156 GLY GLY B . n F 3 169 ASN 169 157 157 ASN ASN B . n F 3 170 TYR 170 158 158 TYR TYR B . n F 3 171 SER 171 159 159 SER SER B . n F 3 172 GLY 172 160 160 GLY GLY B . n F 3 173 GLY 173 161 161 GLY GLY B . n F 3 174 LEU 174 162 162 LEU LEU B . n F 3 175 ALA 175 163 163 ALA ALA B . n F 3 176 VAL 176 164 164 VAL VAL B . n F 3 177 LYS 177 165 165 LYS LYS B . n F 3 178 GLU 178 166 166 GLU GLU B . n F 3 179 TRP 179 167 167 TRP TRP B . n F 3 180 LEU 180 168 168 LEU LEU B . n F 3 181 LEU 181 169 169 LEU LEU B . n F 3 182 ALA 182 170 170 ALA ALA B . n F 3 183 HIS 183 171 171 HIS HIS B . n F 3 184 GLU 184 172 172 GLU GLU B . n F 3 185 GLY 185 173 173 GLY GLY B . n F 3 186 HIS 186 174 174 HIS HIS B . n F 3 187 ARG 187 175 ? ? ? B . n F 3 188 LEU 188 176 ? ? ? B . n # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 MOSFLM 'data reduction' . ? 2 CCP4 'data scaling' '(SCALA)' ? 3 AMoRE phasing . ? 4 # _cell.entry_id 1T39 _cell.length_a 228.145 _cell.length_b 41.250 _cell.length_c 70.629 _cell.angle_alpha 90.00 _cell.angle_beta 103.14 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1T39 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1T39 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 57.1 _exptl_crystal.description ? _exptl_crystal.density_Matthews 2.86 _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details 'PEG 8000, MES, calcium acetate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 8000' ? ? ? 1 2 1 MES ? ? ? 1 3 1 'calcium acetate' ? ? ? 1 4 1 H2O ? ? ? 1 5 2 'PEG 8000' ? ? ? 1 6 2 'calcium acetate' ? ? ? 1 7 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 200 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2002-06-28 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.98 # _reflns.entry_id 1T39 _reflns.number_all ? _reflns.number_obs 9362 _reflns.percent_possible_obs ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 3.3 _reflns.d_resolution_low 53 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.3 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 9362 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1T39 _refine.ls_number_reflns_obs 9362 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 8413320.97 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF 8413320.97 _refine.ls_d_res_low 27.77 _refine.ls_d_res_high 3.30 _refine.ls_percent_reflns_obs 93.8 _refine.ls_R_factor_obs 0.296 _refine.ls_R_factor_all 0.301 _refine.ls_R_factor_R_work 0.296 _refine.ls_R_factor_R_free 0.344 _refine.ls_R_factor_R_free_error 0.011 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.4 _refine.ls_number_reflns_R_free 973 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.185184 _refine.solvent_model_param_bsol 50.4823 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1EH6' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model GROUP _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1T39 _refine_analyze.Luzzati_coordinate_error_obs 0.60 _refine_analyze.Luzzati_sigma_a_obs 0.86 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.71 _refine_analyze.Luzzati_sigma_a_free 0.73 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2302 _refine_hist.pdbx_number_atoms_nucleic_acid 1058 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3360 _refine_hist.d_res_high 3.30 _refine_hist.d_res_low 27.77 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 21.8 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.26 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 3.30 _refine_ls_shell.d_res_low ? _refine_ls_shell.number_reflns_R_work 1374 _refine_ls_shell.R_factor_R_work ? _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 10.7 _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1T39 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1T39 _struct.title 'HUMAN O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE COVALENTLY CROSSLINKED TO DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1T39 _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text 'ALKYLTRANSFERASE, METHYLTRANSFERASE, DNA REPAIR, HELIX-TURN-HELIX, TRANSFERASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP MGMT_HUMAN P16455 3 ;MDKDCEMKRTTLDSPLGKLELSGCEQGLHEIKLLGKGTSAADAVEVPAPAAVLGGPEPLMQCTAWLNAYFHQPEAIEEFP VPALHHPVFQQESFTRQVLWKLLKVVKFGEVISYQQLAALAGNPKAARAVGGAMRGNPVPILIPCHRVVCSSGAVGNYSG GLAVKEWLLAHEGHRL ; 1 ? 2 PDB 1T39 1T39 1 ? ? ? 3 PDB 1T39 1T39 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1T39 A 13 ? 188 ? P16455 1 ? 176 ? 1 176 2 1 1T39 B 13 ? 188 ? P16455 1 ? 176 ? 1 176 3 2 1T39 C 1 ? 13 ? 1T39 1 ? 13 ? 1 13 4 3 1T39 D 1 ? 13 ? 1T39 14 ? 26 ? 14 26 5 2 1T39 E 1 ? 13 ? 1T39 1 ? 13 ? 1 13 6 3 1T39 F 1 ? 13 ? 1T39 14 ? 26 ? 14 26 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1T39 MET A 1 ? UNP P16455 ? ? 'expression tag' -11 1 1 1T39 ARG A 2 ? UNP P16455 ? ? 'expression tag' -10 2 1 1T39 GLY A 3 ? UNP P16455 ? ? 'expression tag' -9 3 1 1T39 SER A 4 ? UNP P16455 ? ? 'expression tag' -8 4 1 1T39 HIS A 5 ? UNP P16455 ? ? 'expression tag' -7 5 1 1T39 HIS A 6 ? UNP P16455 ? ? 'expression tag' -6 6 1 1T39 HIS A 7 ? UNP P16455 ? ? 'expression tag' -5 7 1 1T39 HIS A 8 ? UNP P16455 ? ? 'expression tag' -4 8 1 1T39 HIS A 9 ? UNP P16455 ? ? 'expression tag' -3 9 1 1T39 HIS A 10 ? UNP P16455 ? ? 'expression tag' -2 10 1 1T39 GLY A 11 ? UNP P16455 ? ? 'expression tag' -1 11 1 1T39 SER A 12 ? UNP P16455 ? ? 'expression tag' 0 12 2 1T39 MET B 1 ? UNP P16455 ? ? 'expression tag' -11 13 2 1T39 ARG B 2 ? UNP P16455 ? ? 'expression tag' -10 14 2 1T39 GLY B 3 ? UNP P16455 ? ? 'expression tag' -9 15 2 1T39 SER B 4 ? UNP P16455 ? ? 'expression tag' -8 16 2 1T39 HIS B 5 ? UNP P16455 ? ? 'expression tag' -7 17 2 1T39 HIS B 6 ? UNP P16455 ? ? 'expression tag' -6 18 2 1T39 HIS B 7 ? UNP P16455 ? ? 'expression tag' -5 19 2 1T39 HIS B 8 ? UNP P16455 ? ? 'expression tag' -4 20 2 1T39 HIS B 9 ? UNP P16455 ? ? 'expression tag' -3 21 2 1T39 HIS B 10 ? UNP P16455 ? ? 'expression tag' -2 22 2 1T39 GLY B 11 ? UNP P16455 ? ? 'expression tag' -1 23 2 1T39 SER B 12 ? UNP P16455 ? ? 'expression tag' 0 24 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? trimeric 3 2 author_defined_assembly ? trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E 2 1 C,D,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO E 68 ? GLN E 84 ? PRO A 56 GLN A 72 1 ? 17 HELX_P HELX_P2 2 PRO E 85 ? PHE E 91 ? PRO A 73 PHE A 79 5 ? 7 HELX_P HELX_P3 3 HIS E 98 ? GLN E 103 ? HIS A 86 GLN A 91 1 ? 6 HELX_P HELX_P4 4 SER E 105 ? VAL E 117 ? SER A 93 VAL A 105 1 ? 13 HELX_P HELX_P5 5 TYR E 126 ? ALA E 133 ? TYR A 114 ALA A 121 1 ? 8 HELX_P HELX_P6 6 ALA E 139 ? GLY E 148 ? ALA A 127 GLY A 136 1 ? 10 HELX_P HELX_P7 7 GLY E 173 ? HIS E 186 ? GLY A 161 HIS A 174 1 ? 14 HELX_P HELX_P8 8 PRO F 68 ? GLN F 84 ? PRO B 56 GLN B 72 1 ? 17 HELX_P HELX_P9 9 PRO F 85 ? PHE F 91 ? PRO B 73 PHE B 79 5 ? 7 HELX_P HELX_P10 10 HIS F 98 ? GLN F 103 ? HIS B 86 GLN B 91 1 ? 6 HELX_P HELX_P11 11 SER F 105 ? VAL F 117 ? SER B 93 VAL B 105 1 ? 13 HELX_P HELX_P12 12 TYR F 126 ? ALA F 133 ? TYR B 114 ALA B 121 1 ? 8 HELX_P HELX_P13 13 ALA F 138 ? GLY F 148 ? ALA B 126 GLY B 136 1 ? 11 HELX_P HELX_P14 14 GLY F 173 ? HIS F 186 ? GLY B 161 HIS B 174 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DG 6 "O3'" ? ? ? 1_555 A E1X 7 P ? ? C DG 6 C E1X 7 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale2 covale both ? A E1X 7 "O3'" ? ? ? 1_555 A DC 8 P ? ? C E1X 7 C DC 8 1_555 ? ? ? ? ? ? ? 1.595 ? ? covale3 covale none ? A E1X 7 C11 ? ? ? 1_555 E CYS 157 SG ? ? C E1X 7 A CYS 145 1_555 ? ? ? ? ? ? ? 1.805 ? ? covale4 covale both ? C DG 6 "O3'" ? ? ? 1_555 C E1X 7 P ? ? E DG 6 E E1X 7 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale5 covale both ? C E1X 7 "O3'" ? ? ? 1_555 C DC 8 P ? ? E E1X 7 E DC 8 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale6 covale none ? C E1X 7 C11 ? ? ? 1_555 F CYS 157 SG ? ? E E1X 7 B CYS 145 1_555 ? ? ? ? ? ? ? 1.792 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 13 N3 ? ? C DG 1 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 13 O2 ? ? C DG 1 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 13 N4 ? ? C DG 1 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 12 N1 ? ? C DC 2 D DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 12 O6 ? ? C DC 2 D DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 12 N2 ? ? C DC 2 D DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 11 N1 ? ? C DC 3 D DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 11 O6 ? ? C DC 3 D DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 11 N2 ? ? C DC 3 D DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 10 N3 ? ? C DA 4 D DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 10 O4 ? ? C DA 4 D DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DC 8 N4 ? ? C DT 5 D DC 21 1_555 ? ? ? ? ? ? 'DT-DC MISPAIR' ? ? ? hydrog13 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 9 N1 ? ? C DT 5 D DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 9 N6 ? ? C DT 5 D DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 8 N3 ? ? C DG 6 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 8 O2 ? ? C DG 6 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 8 N4 ? ? C DG 6 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 6 N1 ? ? C DC 8 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 6 O6 ? ? C DC 8 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 6 N2 ? ? C DC 8 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 5 N1 ? ? C DT 9 D DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 5 N6 ? ? C DT 9 D DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 4 N3 ? ? C DA 10 D DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 4 O4 ? ? C DA 10 D DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DC 3 N3 ? ? C DG 11 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DC 3 O2 ? ? C DG 11 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DC 3 N4 ? ? C DG 11 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 2 N1 ? ? C DT 12 D DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 2 N6 ? ? C DT 12 D DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 13 N1 ? ? ? 1_555 B DT 1 N3 ? ? C DA 13 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DA 13 N6 ? ? ? 1_555 B DT 1 O4 ? ? C DA 13 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 12 N1 ? ? E DC 2 F DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 12 O6 ? ? E DC 2 F DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 12 N2 ? ? E DC 2 F DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DC 3 N3 ? ? ? 1_555 D DG 11 N1 ? ? E DC 3 F DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DC 3 N4 ? ? ? 1_555 D DG 11 O6 ? ? E DC 3 F DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DC 3 O2 ? ? ? 1_555 D DG 11 N2 ? ? E DC 3 F DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DC 3 O2 ? ? ? 1_555 D DG 12 N2 ? ? E DC 3 F DG 25 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog39 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 10 N3 ? ? E DA 4 F DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 10 O4 ? ? E DA 4 F DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DT 5 N3 ? ? ? 1_555 D DA 9 N1 ? ? E DT 5 F DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DT 5 O4 ? ? ? 1_555 D DA 9 N6 ? ? E DT 5 F DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DG 6 N1 ? ? ? 1_555 D DC 8 N3 ? ? E DG 6 F DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DG 6 N2 ? ? ? 1_555 D DC 8 O2 ? ? E DG 6 F DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DG 6 O6 ? ? ? 1_555 D DC 8 N4 ? ? E DG 6 F DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 6 N1 ? ? E DC 8 F DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 6 O6 ? ? E DC 8 F DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 6 N2 ? ? E DC 8 F DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C DT 9 N3 ? ? ? 1_555 D DA 5 N1 ? ? E DT 9 F DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C DT 9 O4 ? ? ? 1_555 D DA 5 N6 ? ? E DT 9 F DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C DA 10 N1 ? ? ? 1_555 D DT 4 N3 ? ? E DA 10 F DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C DA 10 N6 ? ? ? 1_555 D DT 4 O4 ? ? E DA 10 F DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? C DG 11 N1 ? ? ? 1_555 D DC 3 N3 ? ? E DG 11 F DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? C DG 11 N2 ? ? ? 1_555 D DC 3 O2 ? ? E DG 11 F DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? C DG 11 O6 ? ? ? 1_555 D DC 3 N4 ? ? E DG 11 F DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? C DT 12 N3 ? ? ? 1_555 D DA 2 N1 ? ? E DT 12 F DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? C DT 12 O4 ? ? ? 1_555 D DA 2 N6 ? ? E DT 12 F DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? C DA 13 N1 ? ? ? 1_555 D DT 1 N3 ? ? E DA 13 F DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? C DA 13 N6 ? ? ? 1_555 D DT 1 O4 ? ? E DA 13 F DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 E1X A 7 ? CYS E 157 ? E1X C 7 ? 1_555 CYS A 145 ? 1_555 C11 SG CYS 1 E1X None 'Covalent chemical modification' 2 E1X C 7 ? CYS F 157 ? E1X E 7 ? 1_555 CYS B 145 ? 1_555 C11 SG CYS 1 E1X None 'Covalent chemical modification' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? C ? 2 ? D ? 2 ? E ? 2 ? F ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel F 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS E 20 ? THR E 22 ? LYS A 8 THR A 10 A 2 LEU E 33 ? CYS E 36 ? LEU A 21 CYS A 24 A 3 GLY E 39 ? LEU E 40 ? GLY A 27 LEU A 28 B 1 ASP E 25 ? SER E 26 ? ASP A 13 SER A 14 B 2 GLY E 29 ? LYS E 30 ? GLY A 17 LYS A 18 C 1 ILE E 124 ? SER E 125 ? ILE A 112 SER A 113 C 2 VAL E 160 ? VAL E 161 ? VAL A 148 VAL A 149 D 1 ASP F 25 ? SER F 26 ? ASP B 13 SER B 14 D 2 GLY F 29 ? LYS F 30 ? GLY B 17 LYS B 18 E 1 GLY F 35 ? CYS F 36 ? GLY B 23 CYS B 24 E 2 GLY F 39 ? LEU F 40 ? GLY B 27 LEU B 28 F 1 ILE F 124 ? SER F 125 ? ILE B 112 SER B 113 F 2 VAL F 160 ? VAL F 161 ? VAL B 148 VAL B 149 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS E 20 ? N LYS A 8 O GLY E 35 ? O GLY A 23 A 2 3 N CYS E 36 ? N CYS A 24 O GLY E 39 ? O GLY A 27 B 1 2 N SER E 26 ? N SER A 14 O GLY E 29 ? O GLY A 17 C 1 2 N ILE E 124 ? N ILE A 112 O VAL E 161 ? O VAL A 149 D 1 2 N SER F 26 ? N SER B 14 O GLY F 29 ? O GLY B 17 E 1 2 N CYS F 36 ? N CYS B 24 O GLY F 39 ? O GLY B 27 F 1 2 N ILE F 124 ? N ILE B 112 O VAL F 161 ? O VAL B 149 # _pdbx_entry_details.entry_id 1T39 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DC 3 ? ? "C1'" C DC 3 ? ? N1 C DC 3 ? ? 110.72 108.30 2.42 0.30 N 2 1 "O4'" D DA 18 ? ? "C1'" D DA 18 ? ? N9 D DA 18 ? ? 110.43 108.30 2.13 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 7 ? ? 61.64 84.98 2 1 ILE A 31 ? ? -171.45 78.42 3 1 PHE A 70 ? ? -68.93 -76.75 4 1 GLN A 72 ? ? -164.42 41.89 5 1 ALA A 75 ? ? -163.97 64.37 6 1 ARG A 96 ? ? -59.04 -71.53 7 1 ASN A 123 ? ? -51.52 105.16 8 1 VAL A 139 ? ? -106.25 74.53 9 1 ILE A 141 ? ? 73.12 -40.99 10 1 PRO A 144 ? ? -59.05 71.45 11 1 ILE B 31 ? ? -170.57 80.72 12 1 PHE B 70 ? ? -69.27 -76.63 13 1 GLN B 72 ? ? -164.31 42.74 14 1 ALA B 75 ? ? -163.88 64.18 15 1 ARG B 96 ? ? -57.59 -72.18 16 1 ASN B 123 ? ? -52.16 105.40 17 1 VAL B 139 ? ? -105.98 73.80 18 1 ILE B 141 ? ? 72.42 -41.23 19 1 PRO B 144 ? ? -58.10 69.95 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC C 3 ? ? 0.061 'SIDE CHAIN' 2 1 DC D 21 ? ? 0.077 'SIDE CHAIN' # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A E1X 7 C E1X 7 ? DA ? 2 C E1X 7 E E1X 7 ? DA ? # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE CYS 145 residues are COVALENTly CHEMICAL CROSSLINK TO E1X 7 residues ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -11 ? E MET 1 2 1 Y 1 A ARG -10 ? E ARG 2 3 1 Y 1 A GLY -9 ? E GLY 3 4 1 Y 1 A SER -8 ? E SER 4 5 1 Y 1 A HIS -7 ? E HIS 5 6 1 Y 1 A HIS -6 ? E HIS 6 7 1 Y 1 A HIS -5 ? E HIS 7 8 1 Y 1 A HIS -4 ? E HIS 8 9 1 Y 1 A HIS -3 ? E HIS 9 10 1 Y 1 A HIS -2 ? E HIS 10 11 1 Y 1 A GLY -1 ? E GLY 11 12 1 Y 1 A SER 0 ? E SER 12 13 1 Y 1 A MET 1 ? E MET 13 14 1 Y 1 A ASP 2 ? E ASP 14 15 1 Y 1 A LYS 3 ? E LYS 15 16 1 Y 1 A ASP 4 ? E ASP 16 17 1 Y 1 A LYS 36 ? E LYS 48 18 1 Y 1 A GLY 37 ? E GLY 49 19 1 Y 1 A THR 38 ? E THR 50 20 1 Y 1 A SER 39 ? E SER 51 21 1 Y 1 A ALA 40 ? E ALA 52 22 1 Y 1 A ALA 41 ? E ALA 53 23 1 Y 1 A ASP 42 ? E ASP 54 24 1 Y 1 A ALA 43 ? E ALA 55 25 1 Y 1 A VAL 44 ? E VAL 56 26 1 Y 1 A GLU 45 ? E GLU 57 27 1 Y 1 A VAL 46 ? E VAL 58 28 1 Y 1 A PRO 47 ? E PRO 59 29 1 Y 1 A ALA 48 ? E ALA 60 30 1 Y 1 A PRO 49 ? E PRO 61 31 1 Y 1 A ALA 50 ? E ALA 62 32 1 Y 1 A ALA 51 ? E ALA 63 33 1 Y 1 A VAL 52 ? E VAL 64 34 1 Y 1 A LEU 53 ? E LEU 65 35 1 Y 1 A GLY 54 ? E GLY 66 36 1 Y 1 A GLY 55 ? E GLY 67 37 1 Y 1 A LEU 176 ? E LEU 188 38 1 Y 1 B MET -11 ? F MET 1 39 1 Y 1 B ARG -10 ? F ARG 2 40 1 Y 1 B GLY -9 ? F GLY 3 41 1 Y 1 B SER -8 ? F SER 4 42 1 Y 1 B HIS -7 ? F HIS 5 43 1 Y 1 B HIS -6 ? F HIS 6 44 1 Y 1 B HIS -5 ? F HIS 7 45 1 Y 1 B HIS -4 ? F HIS 8 46 1 Y 1 B HIS -3 ? F HIS 9 47 1 Y 1 B HIS -2 ? F HIS 10 48 1 Y 1 B GLY -1 ? F GLY 11 49 1 Y 1 B SER 0 ? F SER 12 50 1 Y 1 B MET 1 ? F MET 13 51 1 Y 1 B ASP 2 ? F ASP 14 52 1 Y 1 B LYS 3 ? F LYS 15 53 1 Y 1 B ASP 4 ? F ASP 16 54 1 Y 1 B CYS 5 ? F CYS 17 55 1 Y 1 B GLU 6 ? F GLU 18 56 1 Y 1 B LYS 36 ? F LYS 48 57 1 Y 1 B GLY 37 ? F GLY 49 58 1 Y 1 B THR 38 ? F THR 50 59 1 Y 1 B SER 39 ? F SER 51 60 1 Y 1 B ALA 40 ? F ALA 52 61 1 Y 1 B ALA 41 ? F ALA 53 62 1 Y 1 B ASP 42 ? F ASP 54 63 1 Y 1 B ALA 43 ? F ALA 55 64 1 Y 1 B VAL 44 ? F VAL 56 65 1 Y 1 B GLU 45 ? F GLU 57 66 1 Y 1 B VAL 46 ? F VAL 58 67 1 Y 1 B PRO 47 ? F PRO 59 68 1 Y 1 B ALA 48 ? F ALA 60 69 1 Y 1 B PRO 49 ? F PRO 61 70 1 Y 1 B ALA 50 ? F ALA 62 71 1 Y 1 B ALA 51 ? F ALA 63 72 1 Y 1 B VAL 52 ? F VAL 64 73 1 Y 1 B LEU 53 ? F LEU 65 74 1 Y 1 B GLY 54 ? F GLY 66 75 1 Y 1 B GLY 55 ? F GLY 67 76 1 Y 1 B ARG 175 ? F ARG 187 77 1 Y 1 B LEU 176 ? F LEU 188 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 E1X P P N N 231 E1X OP1 O N N 232 E1X OP2 O N N 233 E1X "O5'" O N N 234 E1X N9 N Y N 235 E1X C4 C Y N 236 E1X N3 N N N 237 E1X C2 C N N 238 E1X O2 O N N 239 E1X N1 N N N 240 E1X C10 C N N 241 E1X C11 C N N 242 E1X O6 O N N 243 E1X C6 C N N 244 E1X C5 C Y N 245 E1X N7 N Y N 246 E1X C8 C Y N 247 E1X "C2'" C N N 248 E1X "C5'" C N N 249 E1X "C4'" C N R 250 E1X "O4'" O N N 251 E1X "C1'" C N R 252 E1X "C3'" C N S 253 E1X "O3'" O N N 254 E1X OP3 O N N 255 E1X HOP2 H N N 256 E1X HN3 H N N 257 E1X H101 H N N 258 E1X H102 H N N 259 E1X H111 H N N 260 E1X H112 H N N 261 E1X H113 H N N 262 E1X H8 H N N 263 E1X "H2'" H N N 264 E1X "H2''" H N N 265 E1X "H5'" H N N 266 E1X "H5''" H N N 267 E1X "H4'" H N N 268 E1X "H1'" H N N 269 E1X H1 H N N 270 E1X "HO3'" H N N 271 E1X HOP3 H N N 272 GLN N N N N 273 GLN CA C N S 274 GLN C C N N 275 GLN O O N N 276 GLN CB C N N 277 GLN CG C N N 278 GLN CD C N N 279 GLN OE1 O N N 280 GLN NE2 N N N 281 GLN OXT O N N 282 GLN H H N N 283 GLN H2 H N N 284 GLN HA H N N 285 GLN HB2 H N N 286 GLN HB3 H N N 287 GLN HG2 H N N 288 GLN HG3 H N N 289 GLN HE21 H N N 290 GLN HE22 H N N 291 GLN HXT H N N 292 GLU N N N N 293 GLU CA C N S 294 GLU C C N N 295 GLU O O N N 296 GLU CB C N N 297 GLU CG C N N 298 GLU CD C N N 299 GLU OE1 O N N 300 GLU OE2 O N N 301 GLU OXT O N N 302 GLU H H N N 303 GLU H2 H N N 304 GLU HA H N N 305 GLU HB2 H N N 306 GLU HB3 H N N 307 GLU HG2 H N N 308 GLU HG3 H N N 309 GLU HE2 H N N 310 GLU HXT H N N 311 GLY N N N N 312 GLY CA C N N 313 GLY C C N N 314 GLY O O N N 315 GLY OXT O N N 316 GLY H H N N 317 GLY H2 H N N 318 GLY HA2 H N N 319 GLY HA3 H N N 320 GLY HXT H N N 321 HIS N N N N 322 HIS CA C N S 323 HIS C C N N 324 HIS O O N N 325 HIS CB C N N 326 HIS CG C Y N 327 HIS ND1 N Y N 328 HIS CD2 C Y N 329 HIS CE1 C Y N 330 HIS NE2 N Y N 331 HIS OXT O N N 332 HIS H H N N 333 HIS H2 H N N 334 HIS HA H N N 335 HIS HB2 H N N 336 HIS HB3 H N N 337 HIS HD1 H N N 338 HIS HD2 H N N 339 HIS HE1 H N N 340 HIS HE2 H N N 341 HIS HXT H N N 342 ILE N N N N 343 ILE CA C N S 344 ILE C C N N 345 ILE O O N N 346 ILE CB C N S 347 ILE CG1 C N N 348 ILE CG2 C N N 349 ILE CD1 C N N 350 ILE OXT O N N 351 ILE H H N N 352 ILE H2 H N N 353 ILE HA H N N 354 ILE HB H N N 355 ILE HG12 H N N 356 ILE HG13 H N N 357 ILE HG21 H N N 358 ILE HG22 H N N 359 ILE HG23 H N N 360 ILE HD11 H N N 361 ILE HD12 H N N 362 ILE HD13 H N N 363 ILE HXT H N N 364 LEU N N N N 365 LEU CA C N S 366 LEU C C N N 367 LEU O O N N 368 LEU CB C N N 369 LEU CG C N N 370 LEU CD1 C N N 371 LEU CD2 C N N 372 LEU OXT O N N 373 LEU H H N N 374 LEU H2 H N N 375 LEU HA H N N 376 LEU HB2 H N N 377 LEU HB3 H N N 378 LEU HG H N N 379 LEU HD11 H N N 380 LEU HD12 H N N 381 LEU HD13 H N N 382 LEU HD21 H N N 383 LEU HD22 H N N 384 LEU HD23 H N N 385 LEU HXT H N N 386 LYS N N N N 387 LYS CA C N S 388 LYS C C N N 389 LYS O O N N 390 LYS CB C N N 391 LYS CG C N N 392 LYS CD C N N 393 LYS CE C N N 394 LYS NZ N N N 395 LYS OXT O N N 396 LYS H H N N 397 LYS H2 H N N 398 LYS HA H N N 399 LYS HB2 H N N 400 LYS HB3 H N N 401 LYS HG2 H N N 402 LYS HG3 H N N 403 LYS HD2 H N N 404 LYS HD3 H N N 405 LYS HE2 H N N 406 LYS HE3 H N N 407 LYS HZ1 H N N 408 LYS HZ2 H N N 409 LYS HZ3 H N N 410 LYS HXT H N N 411 MET N N N N 412 MET CA C N S 413 MET C C N N 414 MET O O N N 415 MET CB C N N 416 MET CG C N N 417 MET SD S N N 418 MET CE C N N 419 MET OXT O N N 420 MET H H N N 421 MET H2 H N N 422 MET HA H N N 423 MET HB2 H N N 424 MET HB3 H N N 425 MET HG2 H N N 426 MET HG3 H N N 427 MET HE1 H N N 428 MET HE2 H N N 429 MET HE3 H N N 430 MET HXT H N N 431 PHE N N N N 432 PHE CA C N S 433 PHE C C N N 434 PHE O O N N 435 PHE CB C N N 436 PHE CG C Y N 437 PHE CD1 C Y N 438 PHE CD2 C Y N 439 PHE CE1 C Y N 440 PHE CE2 C Y N 441 PHE CZ C Y N 442 PHE OXT O N N 443 PHE H H N N 444 PHE H2 H N N 445 PHE HA H N N 446 PHE HB2 H N N 447 PHE HB3 H N N 448 PHE HD1 H N N 449 PHE HD2 H N N 450 PHE HE1 H N N 451 PHE HE2 H N N 452 PHE HZ H N N 453 PHE HXT H N N 454 PRO N N N N 455 PRO CA C N S 456 PRO C C N N 457 PRO O O N N 458 PRO CB C N N 459 PRO CG C N N 460 PRO CD C N N 461 PRO OXT O N N 462 PRO H H N N 463 PRO HA H N N 464 PRO HB2 H N N 465 PRO HB3 H N N 466 PRO HG2 H N N 467 PRO HG3 H N N 468 PRO HD2 H N N 469 PRO HD3 H N N 470 PRO HXT H N N 471 SER N N N N 472 SER CA C N S 473 SER C C N N 474 SER O O N N 475 SER CB C N N 476 SER OG O N N 477 SER OXT O N N 478 SER H H N N 479 SER H2 H N N 480 SER HA H N N 481 SER HB2 H N N 482 SER HB3 H N N 483 SER HG H N N 484 SER HXT H N N 485 THR N N N N 486 THR CA C N S 487 THR C C N N 488 THR O O N N 489 THR CB C N R 490 THR OG1 O N N 491 THR CG2 C N N 492 THR OXT O N N 493 THR H H N N 494 THR H2 H N N 495 THR HA H N N 496 THR HB H N N 497 THR HG1 H N N 498 THR HG21 H N N 499 THR HG22 H N N 500 THR HG23 H N N 501 THR HXT H N N 502 TRP N N N N 503 TRP CA C N S 504 TRP C C N N 505 TRP O O N N 506 TRP CB C N N 507 TRP CG C Y N 508 TRP CD1 C Y N 509 TRP CD2 C Y N 510 TRP NE1 N Y N 511 TRP CE2 C Y N 512 TRP CE3 C Y N 513 TRP CZ2 C Y N 514 TRP CZ3 C Y N 515 TRP CH2 C Y N 516 TRP OXT O N N 517 TRP H H N N 518 TRP H2 H N N 519 TRP HA H N N 520 TRP HB2 H N N 521 TRP HB3 H N N 522 TRP HD1 H N N 523 TRP HE1 H N N 524 TRP HE3 H N N 525 TRP HZ2 H N N 526 TRP HZ3 H N N 527 TRP HH2 H N N 528 TRP HXT H N N 529 TYR N N N N 530 TYR CA C N S 531 TYR C C N N 532 TYR O O N N 533 TYR CB C N N 534 TYR CG C Y N 535 TYR CD1 C Y N 536 TYR CD2 C Y N 537 TYR CE1 C Y N 538 TYR CE2 C Y N 539 TYR CZ C Y N 540 TYR OH O N N 541 TYR OXT O N N 542 TYR H H N N 543 TYR H2 H N N 544 TYR HA H N N 545 TYR HB2 H N N 546 TYR HB3 H N N 547 TYR HD1 H N N 548 TYR HD2 H N N 549 TYR HE1 H N N 550 TYR HE2 H N N 551 TYR HH H N N 552 TYR HXT H N N 553 VAL N N N N 554 VAL CA C N S 555 VAL C C N N 556 VAL O O N N 557 VAL CB C N N 558 VAL CG1 C N N 559 VAL CG2 C N N 560 VAL OXT O N N 561 VAL H H N N 562 VAL H2 H N N 563 VAL HA H N N 564 VAL HB H N N 565 VAL HG11 H N N 566 VAL HG12 H N N 567 VAL HG13 H N N 568 VAL HG21 H N N 569 VAL HG22 H N N 570 VAL HG23 H N N 571 VAL HXT H N N 572 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 E1X P OP1 doub N N 232 E1X P OP2 sing N N 233 E1X P "O5'" sing N N 234 E1X P OP3 sing N N 235 E1X OP2 HOP2 sing N N 236 E1X "O5'" "C5'" sing N N 237 E1X N9 C4 sing Y N 238 E1X N9 C8 sing Y N 239 E1X N9 "C1'" sing N N 240 E1X C4 N3 sing N N 241 E1X C4 C5 doub Y N 242 E1X N3 C2 sing N N 243 E1X N3 HN3 sing N N 244 E1X C2 O2 doub N N 245 E1X C2 N1 sing N N 246 E1X N1 C10 sing N N 247 E1X N1 C6 sing N N 248 E1X C10 C11 sing N N 249 E1X C10 H101 sing N N 250 E1X C10 H102 sing N N 251 E1X C11 H111 sing N N 252 E1X C11 H112 sing N N 253 E1X C11 H113 sing N N 254 E1X O6 C6 doub N N 255 E1X C6 C5 sing N N 256 E1X C5 N7 sing Y N 257 E1X N7 C8 doub Y N 258 E1X C8 H8 sing N N 259 E1X "C2'" "C1'" sing N N 260 E1X "C2'" "C3'" sing N N 261 E1X "C2'" "H2'" sing N N 262 E1X "C2'" "H2''" sing N N 263 E1X "C5'" "C4'" sing N N 264 E1X "C5'" "H5'" sing N N 265 E1X "C5'" "H5''" sing N N 266 E1X "C4'" "O4'" sing N N 267 E1X "C4'" "C3'" sing N N 268 E1X "C4'" "H4'" sing N N 269 E1X "O4'" "C1'" sing N N 270 E1X "C1'" "H1'" sing N N 271 E1X "C3'" "O3'" sing N N 272 E1X "C3'" H1 sing N N 273 E1X "O3'" "HO3'" sing N N 274 E1X OP3 HOP3 sing N N 275 GLN N CA sing N N 276 GLN N H sing N N 277 GLN N H2 sing N N 278 GLN CA C sing N N 279 GLN CA CB sing N N 280 GLN CA HA sing N N 281 GLN C O doub N N 282 GLN C OXT sing N N 283 GLN CB CG sing N N 284 GLN CB HB2 sing N N 285 GLN CB HB3 sing N N 286 GLN CG CD sing N N 287 GLN CG HG2 sing N N 288 GLN CG HG3 sing N N 289 GLN CD OE1 doub N N 290 GLN CD NE2 sing N N 291 GLN NE2 HE21 sing N N 292 GLN NE2 HE22 sing N N 293 GLN OXT HXT sing N N 294 GLU N CA sing N N 295 GLU N H sing N N 296 GLU N H2 sing N N 297 GLU CA C sing N N 298 GLU CA CB sing N N 299 GLU CA HA sing N N 300 GLU C O doub N N 301 GLU C OXT sing N N 302 GLU CB CG sing N N 303 GLU CB HB2 sing N N 304 GLU CB HB3 sing N N 305 GLU CG CD sing N N 306 GLU CG HG2 sing N N 307 GLU CG HG3 sing N N 308 GLU CD OE1 doub N N 309 GLU CD OE2 sing N N 310 GLU OE2 HE2 sing N N 311 GLU OXT HXT sing N N 312 GLY N CA sing N N 313 GLY N H sing N N 314 GLY N H2 sing N N 315 GLY CA C sing N N 316 GLY CA HA2 sing N N 317 GLY CA HA3 sing N N 318 GLY C O doub N N 319 GLY C OXT sing N N 320 GLY OXT HXT sing N N 321 HIS N CA sing N N 322 HIS N H sing N N 323 HIS N H2 sing N N 324 HIS CA C sing N N 325 HIS CA CB sing N N 326 HIS CA HA sing N N 327 HIS C O doub N N 328 HIS C OXT sing N N 329 HIS CB CG sing N N 330 HIS CB HB2 sing N N 331 HIS CB HB3 sing N N 332 HIS CG ND1 sing Y N 333 HIS CG CD2 doub Y N 334 HIS ND1 CE1 doub Y N 335 HIS ND1 HD1 sing N N 336 HIS CD2 NE2 sing Y N 337 HIS CD2 HD2 sing N N 338 HIS CE1 NE2 sing Y N 339 HIS CE1 HE1 sing N N 340 HIS NE2 HE2 sing N N 341 HIS OXT HXT sing N N 342 ILE N CA sing N N 343 ILE N H sing N N 344 ILE N H2 sing N N 345 ILE CA C sing N N 346 ILE CA CB sing N N 347 ILE CA HA sing N N 348 ILE C O doub N N 349 ILE C OXT sing N N 350 ILE CB CG1 sing N N 351 ILE CB CG2 sing N N 352 ILE CB HB sing N N 353 ILE CG1 CD1 sing N N 354 ILE CG1 HG12 sing N N 355 ILE CG1 HG13 sing N N 356 ILE CG2 HG21 sing N N 357 ILE CG2 HG22 sing N N 358 ILE CG2 HG23 sing N N 359 ILE CD1 HD11 sing N N 360 ILE CD1 HD12 sing N N 361 ILE CD1 HD13 sing N N 362 ILE OXT HXT sing N N 363 LEU N CA sing N N 364 LEU N H sing N N 365 LEU N H2 sing N N 366 LEU CA C sing N N 367 LEU CA CB sing N N 368 LEU CA HA sing N N 369 LEU C O doub N N 370 LEU C OXT sing N N 371 LEU CB CG sing N N 372 LEU CB HB2 sing N N 373 LEU CB HB3 sing N N 374 LEU CG CD1 sing N N 375 LEU CG CD2 sing N N 376 LEU CG HG sing N N 377 LEU CD1 HD11 sing N N 378 LEU CD1 HD12 sing N N 379 LEU CD1 HD13 sing N N 380 LEU CD2 HD21 sing N N 381 LEU CD2 HD22 sing N N 382 LEU CD2 HD23 sing N N 383 LEU OXT HXT sing N N 384 LYS N CA sing N N 385 LYS N H sing N N 386 LYS N H2 sing N N 387 LYS CA C sing N N 388 LYS CA CB sing N N 389 LYS CA HA sing N N 390 LYS C O doub N N 391 LYS C OXT sing N N 392 LYS CB CG sing N N 393 LYS CB HB2 sing N N 394 LYS CB HB3 sing N N 395 LYS CG CD sing N N 396 LYS CG HG2 sing N N 397 LYS CG HG3 sing N N 398 LYS CD CE sing N N 399 LYS CD HD2 sing N N 400 LYS CD HD3 sing N N 401 LYS CE NZ sing N N 402 LYS CE HE2 sing N N 403 LYS CE HE3 sing N N 404 LYS NZ HZ1 sing N N 405 LYS NZ HZ2 sing N N 406 LYS NZ HZ3 sing N N 407 LYS OXT HXT sing N N 408 MET N CA sing N N 409 MET N H sing N N 410 MET N H2 sing N N 411 MET CA C sing N N 412 MET CA CB sing N N 413 MET CA HA sing N N 414 MET C O doub N N 415 MET C OXT sing N N 416 MET CB CG sing N N 417 MET CB HB2 sing N N 418 MET CB HB3 sing N N 419 MET CG SD sing N N 420 MET CG HG2 sing N N 421 MET CG HG3 sing N N 422 MET SD CE sing N N 423 MET CE HE1 sing N N 424 MET CE HE2 sing N N 425 MET CE HE3 sing N N 426 MET OXT HXT sing N N 427 PHE N CA sing N N 428 PHE N H sing N N 429 PHE N H2 sing N N 430 PHE CA C sing N N 431 PHE CA CB sing N N 432 PHE CA HA sing N N 433 PHE C O doub N N 434 PHE C OXT sing N N 435 PHE CB CG sing N N 436 PHE CB HB2 sing N N 437 PHE CB HB3 sing N N 438 PHE CG CD1 doub Y N 439 PHE CG CD2 sing Y N 440 PHE CD1 CE1 sing Y N 441 PHE CD1 HD1 sing N N 442 PHE CD2 CE2 doub Y N 443 PHE CD2 HD2 sing N N 444 PHE CE1 CZ doub Y N 445 PHE CE1 HE1 sing N N 446 PHE CE2 CZ sing Y N 447 PHE CE2 HE2 sing N N 448 PHE CZ HZ sing N N 449 PHE OXT HXT sing N N 450 PRO N CA sing N N 451 PRO N CD sing N N 452 PRO N H sing N N 453 PRO CA C sing N N 454 PRO CA CB sing N N 455 PRO CA HA sing N N 456 PRO C O doub N N 457 PRO C OXT sing N N 458 PRO CB CG sing N N 459 PRO CB HB2 sing N N 460 PRO CB HB3 sing N N 461 PRO CG CD sing N N 462 PRO CG HG2 sing N N 463 PRO CG HG3 sing N N 464 PRO CD HD2 sing N N 465 PRO CD HD3 sing N N 466 PRO OXT HXT sing N N 467 SER N CA sing N N 468 SER N H sing N N 469 SER N H2 sing N N 470 SER CA C sing N N 471 SER CA CB sing N N 472 SER CA HA sing N N 473 SER C O doub N N 474 SER C OXT sing N N 475 SER CB OG sing N N 476 SER CB HB2 sing N N 477 SER CB HB3 sing N N 478 SER OG HG sing N N 479 SER OXT HXT sing N N 480 THR N CA sing N N 481 THR N H sing N N 482 THR N H2 sing N N 483 THR CA C sing N N 484 THR CA CB sing N N 485 THR CA HA sing N N 486 THR C O doub N N 487 THR C OXT sing N N 488 THR CB OG1 sing N N 489 THR CB CG2 sing N N 490 THR CB HB sing N N 491 THR OG1 HG1 sing N N 492 THR CG2 HG21 sing N N 493 THR CG2 HG22 sing N N 494 THR CG2 HG23 sing N N 495 THR OXT HXT sing N N 496 TRP N CA sing N N 497 TRP N H sing N N 498 TRP N H2 sing N N 499 TRP CA C sing N N 500 TRP CA CB sing N N 501 TRP CA HA sing N N 502 TRP C O doub N N 503 TRP C OXT sing N N 504 TRP CB CG sing N N 505 TRP CB HB2 sing N N 506 TRP CB HB3 sing N N 507 TRP CG CD1 doub Y N 508 TRP CG CD2 sing Y N 509 TRP CD1 NE1 sing Y N 510 TRP CD1 HD1 sing N N 511 TRP CD2 CE2 doub Y N 512 TRP CD2 CE3 sing Y N 513 TRP NE1 CE2 sing Y N 514 TRP NE1 HE1 sing N N 515 TRP CE2 CZ2 sing Y N 516 TRP CE3 CZ3 doub Y N 517 TRP CE3 HE3 sing N N 518 TRP CZ2 CH2 doub Y N 519 TRP CZ2 HZ2 sing N N 520 TRP CZ3 CH2 sing Y N 521 TRP CZ3 HZ3 sing N N 522 TRP CH2 HH2 sing N N 523 TRP OXT HXT sing N N 524 TYR N CA sing N N 525 TYR N H sing N N 526 TYR N H2 sing N N 527 TYR CA C sing N N 528 TYR CA CB sing N N 529 TYR CA HA sing N N 530 TYR C O doub N N 531 TYR C OXT sing N N 532 TYR CB CG sing N N 533 TYR CB HB2 sing N N 534 TYR CB HB3 sing N N 535 TYR CG CD1 doub Y N 536 TYR CG CD2 sing Y N 537 TYR CD1 CE1 sing Y N 538 TYR CD1 HD1 sing N N 539 TYR CD2 CE2 doub Y N 540 TYR CD2 HD2 sing N N 541 TYR CE1 CZ doub Y N 542 TYR CE1 HE1 sing N N 543 TYR CE2 CZ sing Y N 544 TYR CE2 HE2 sing N N 545 TYR CZ OH sing N N 546 TYR OH HH sing N N 547 TYR OXT HXT sing N N 548 VAL N CA sing N N 549 VAL N H sing N N 550 VAL N H2 sing N N 551 VAL CA C sing N N 552 VAL CA CB sing N N 553 VAL CA HA sing N N 554 VAL C O doub N N 555 VAL C OXT sing N N 556 VAL CB CG1 sing N N 557 VAL CB CG2 sing N N 558 VAL CB HB sing N N 559 VAL CG1 HG11 sing N N 560 VAL CG1 HG12 sing N N 561 VAL CG1 HG13 sing N N 562 VAL CG2 HG21 sing N N 563 VAL CG2 HG22 sing N N 564 VAL CG2 HG23 sing N N 565 VAL OXT HXT sing N N 566 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1T39 'double helix' 1T39 'b-form double helix' 1T39 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 13 1_555 0.036 -0.454 -1.652 -11.141 -9.116 -0.550 1 C_DG1:DC26_D C 1 ? D 26 ? 19 1 1 A DC 2 1_555 B DG 12 1_555 0.482 0.037 -0.272 28.224 -17.312 1.498 2 C_DC2:DG25_D C 2 ? D 25 ? 19 1 1 A DC 3 1_555 B DG 11 1_555 -0.140 -0.069 -0.290 5.230 -15.627 -0.073 3 C_DC3:DG24_D C 3 ? D 24 ? 19 1 1 A DA 4 1_555 B DT 10 1_555 0.112 -0.058 0.439 -5.466 -16.111 -0.262 4 C_DA4:DT23_D C 4 ? D 23 ? 20 1 1 A DT 5 1_555 B DC 8 1_555 -1.222 -1.573 -1.038 12.178 26.334 -25.644 5 C_DT5:DC21_D C 5 ? D 21 ? ? ? 1 A DC 8 1_555 B DG 6 1_555 0.223 -0.021 0.039 -11.283 9.225 -4.587 6 C_DC8:DG19_D C 8 ? D 19 ? 19 1 1 A DT 9 1_555 B DA 5 1_555 -0.067 0.003 -0.315 0.332 -14.471 4.214 7 C_DT9:DA18_D C 9 ? D 18 ? 20 1 1 A DA 10 1_555 B DT 4 1_555 -0.071 -0.087 0.013 5.247 -6.157 2.414 8 C_DA10:DT17_D C 10 ? D 17 ? 20 1 1 A DG 11 1_555 B DC 3 1_555 0.027 0.047 -0.274 4.832 4.886 -1.441 9 C_DG11:DC16_D C 11 ? D 16 ? 19 1 1 A DT 12 1_555 B DA 2 1_555 -0.005 -0.060 0.390 2.719 0.599 0.083 10 C_DT12:DA15_D C 12 ? D 15 ? 20 1 1 A DA 13 1_555 B DT 1 1_555 0.173 -0.009 -0.177 29.582 -25.092 2.076 11 C_DA13:DT14_D C 13 ? D 14 ? 20 1 1 C DC 2 1_555 D DG 12 1_555 0.142 -0.102 -0.837 7.082 -11.799 3.112 12 E_DC2:DG25_F E 2 ? F 25 ? 19 1 1 C DC 3 1_555 D DG 11 1_555 -0.047 -0.265 -1.342 10.663 -5.511 -0.881 13 E_DC3:DG24_F E 3 ? F 24 ? 19 1 1 C DA 4 1_555 D DT 10 1_555 0.124 -0.038 0.241 4.215 -14.204 -0.460 14 E_DA4:DT23_F E 4 ? F 23 ? 20 1 1 C DT 5 1_555 D DA 9 1_555 -0.135 -0.035 1.047 -0.983 5.352 -6.852 15 E_DT5:DA22_F E 5 ? F 22 ? 20 1 1 C DG 6 1_555 D DC 8 1_555 -0.216 -0.025 0.016 2.834 11.843 -1.818 16 E_DG6:DC21_F E 6 ? F 21 ? 19 1 1 C DC 8 1_555 D DG 6 1_555 -0.007 -0.040 0.537 -14.680 12.835 -3.270 17 E_DC8:DG19_F E 8 ? F 19 ? 19 1 1 C DT 9 1_555 D DA 5 1_555 0.040 -0.066 -0.520 0.008 -6.643 0.280 18 E_DT9:DA18_F E 9 ? F 18 ? 20 1 1 C DA 10 1_555 D DT 4 1_555 0.192 -0.021 -0.303 9.661 -12.195 -1.573 19 E_DA10:DT17_F E 10 ? F 17 ? 20 1 1 C DG 11 1_555 D DC 3 1_555 -0.157 0.102 -0.668 -18.403 0.681 0.851 20 E_DG11:DC16_F E 11 ? F 16 ? 19 1 1 C DT 12 1_555 D DA 2 1_555 0.062 -0.239 -0.714 1.676 -10.828 9.055 21 E_DT12:DA15_F E 12 ? F 15 ? 20 1 1 C DA 13 1_555 D DT 1 1_555 -0.009 -0.197 -0.472 16.888 -12.811 12.133 22 E_DA13:DT14_F E 13 ? F 14 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 13 1_555 A DC 2 1_555 B DG 12 1_555 -0.395 1.362 2.411 -6.927 -4.662 34.931 2.693 -0.076 2.251 -7.632 11.339 35.885 1 CC_DG1DC2:DG25DC26_DD C 1 ? D 26 ? C 2 ? D 25 ? 1 A DC 2 1_555 B DG 12 1_555 A DC 3 1_555 B DG 11 1_555 0.531 0.501 3.797 4.378 9.567 29.789 -1.210 -0.002 3.810 17.920 -8.202 31.552 2 CC_DC2DC3:DG24DG25_DD C 2 ? D 25 ? C 3 ? D 24 ? 1 A DC 3 1_555 B DG 11 1_555 A DA 4 1_555 B DT 10 1_555 0.222 0.407 3.396 -3.979 15.322 39.308 -1.106 -0.741 3.290 21.737 5.645 42.259 3 CC_DC3DA4:DT23DG24_DD C 3 ? D 24 ? C 4 ? D 23 ? 1 A DA 4 1_555 B DT 10 1_555 A DT 5 1_555 B DC 8 1_555 0.416 -0.578 4.488 -12.108 -14.177 48.436 0.672 -1.617 4.280 -16.584 14.164 51.697 4 CC_DA4DT5:DC21DT23_DD C 4 ? D 23 ? C 5 ? D 21 ? 1 A DC 8 1_555 B DG 6 1_555 A DT 9 1_555 B DA 5 1_555 0.388 -1.119 2.722 5.727 5.202 33.017 -2.603 0.087 2.551 9.000 -9.907 33.887 5 CC_DC8DT9:DA18DG19_DD C 8 ? D 19 ? C 9 ? D 18 ? 1 A DT 9 1_555 B DA 5 1_555 A DA 10 1_555 B DT 4 1_555 -0.284 2.120 3.303 -5.173 -3.253 36.555 3.768 -0.239 3.119 -5.142 8.177 37.045 6 CC_DT9DA10:DT17DA18_DD C 9 ? D 18 ? C 10 ? D 17 ? 1 A DA 10 1_555 B DT 4 1_555 A DG 11 1_555 B DC 3 1_555 -0.411 -0.869 3.581 -0.647 -2.203 31.331 -1.148 0.625 3.639 -4.072 1.195 31.413 7 CC_DA10DG11:DC16DT17_DD C 10 ? D 17 ? C 11 ? D 16 ? 1 A DG 11 1_555 B DC 3 1_555 A DT 12 1_555 B DA 2 1_555 0.421 -0.385 3.326 0.250 8.743 33.479 -2.003 -0.669 3.133 14.864 -0.424 34.571 8 CC_DG11DT12:DA15DC16_DD C 11 ? D 16 ? C 12 ? D 15 ? 1 A DT 12 1_555 B DA 2 1_555 A DA 13 1_555 B DT 1 1_555 0.009 0.552 2.802 10.835 0.866 38.724 0.719 1.049 2.719 1.275 -15.961 40.164 9 CC_DT12DA13:DT14DA15_DD C 12 ? D 15 ? C 13 ? D 14 ? 1 C DC 2 1_555 D DG 12 1_555 C DC 3 1_555 D DG 11 1_555 0.690 0.331 3.329 10.831 10.604 25.432 -1.792 1.140 3.240 21.792 -22.260 29.542 10 EE_DC2DC3:DG24DG25_FF E 2 ? F 25 ? E 3 ? F 24 ? 1 C DC 3 1_555 D DG 11 1_555 C DA 4 1_555 D DT 10 1_555 0.750 0.775 3.276 -7.120 6.474 40.252 0.402 -1.827 3.186 9.248 10.171 41.340 11 EE_DC3DA4:DT23DG24_FF E 3 ? F 24 ? E 4 ? F 23 ? 1 C DA 4 1_555 D DT 10 1_555 C DT 5 1_555 D DA 9 1_555 0.471 -1.313 3.326 -0.774 9.186 30.446 -4.012 -0.995 2.808 17.009 1.433 31.780 12 EE_DA4DT5:DA22DT23_FF E 4 ? F 23 ? E 5 ? F 22 ? 1 C DT 5 1_555 D DA 9 1_555 C DG 6 1_555 D DC 8 1_555 0.812 2.115 3.274 7.265 0.543 36.823 3.216 -0.285 3.398 0.850 -11.364 37.513 13 EE_DT5DG6:DC21DA22_FF E 5 ? F 22 ? E 6 ? F 21 ? 1 C DC 8 1_555 D DG 6 1_555 C DT 9 1_555 D DA 5 1_555 0.806 -0.750 2.582 14.020 4.996 33.977 -1.736 0.286 2.575 8.085 -22.690 37.006 14 EE_DC8DT9:DA18DG19_FF E 8 ? F 19 ? E 9 ? F 18 ? 1 C DT 9 1_555 D DA 5 1_555 C DA 10 1_555 D DT 4 1_555 -0.588 1.706 3.001 -4.037 7.994 36.468 1.625 0.396 3.332 12.542 6.333 37.516 15 EE_DT9DA10:DT17DA18_FF E 9 ? F 18 ? E 10 ? F 17 ? 1 C DA 10 1_555 D DT 4 1_555 C DG 11 1_555 D DC 3 1_555 -0.050 -1.775 4.058 -5.730 14.606 23.147 -7.497 -1.393 2.470 32.099 12.591 27.903 16 EE_DA10DG11:DC16DT17_FF E 10 ? F 17 ? E 11 ? F 16 ? 1 C DG 11 1_555 D DC 3 1_555 C DT 12 1_555 D DA 2 1_555 0.423 0.932 2.997 5.834 -6.880 38.158 2.134 -0.001 2.825 -10.348 -8.775 39.171 17 EE_DG11DT12:DA15DC16_FF E 11 ? F 16 ? E 12 ? F 15 ? 1 C DT 12 1_555 D DA 2 1_555 C DA 13 1_555 D DT 1 1_555 0.422 0.434 3.199 3.372 9.928 33.911 -0.751 -0.195 3.221 16.537 -5.617 35.449 18 EE_DT12DA13:DT14DA15_FF E 12 ? F 15 ? E 13 ? F 14 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1EH6 _pdbx_initial_refinement_model.details 'PDB ENTRY 1EH6' # _atom_sites.entry_id 1T39 _atom_sites.fract_transf_matrix[1][1] 0.004383 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001023 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024242 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014539 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_