HEADER STRUCTURAL PROTEIN 28-APR-04 1T44 TITLE STRUCTURAL BASIS OF ACTIN SEQUESTRATION BY THYMOSIN-B4: IMPLICATIONS TITLE 2 FOR ARP2/3 ACTIVATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHIMERA OF GELSOLIN DOMAIN 1 AND C-TERMINAL DOMAIN OF COMPND 3 THYMOSIN BETA-4; COMPND 4 CHAIN: G; COMPND 5 FRAGMENT: CHIMERA OF GELSOLIN DOMAIN 1 (RESIDUES 28-152) FROM HUMAN COMPND 6 AND C-TERMINAL DOMAIN OF THYMOSIN BETA-4 FROM MOUSE (RESIDUES 153- COMPND 7 171); COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: ACTIN, ALPHA; COMPND 11 CHAIN: A; COMPND 12 SYNONYM: ALPHA-ACTIN 1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HUMAN, HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 9606, 10090; SOURCE 5 STRAIN: ,; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 10 ORGANISM_COMMON: RABBIT; SOURCE 11 ORGANISM_TAXID: 9986; SOURCE 12 TISSUE: SKELETAL MUSCLE KEYWDS STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.IROBI,A.H.AGUDA,M.LARSSON,L.D.BURTNICK,R.C.ROBINSON REVDAT 5 23-AUG-23 1T44 1 REMARK SEQADV LINK REVDAT 4 23-AUG-17 1T44 1 SOURCE REVDAT 3 24-FEB-09 1T44 1 VERSN REVDAT 2 21-SEP-04 1T44 1 JRNL REVDAT 1 07-SEP-04 1T44 0 JRNL AUTH E.IROBI,A.H.AGUDA,M.LARSSON,C.GUERIN,H.L.YIN,L.D.BURTNICK, JRNL AUTH 2 L.BLANCHOIN,R.C.ROBINSON JRNL TITL STRUCTURAL BASIS OF ACTIN SEQUESTRATION BY THYMOSIN-BETA4: JRNL TITL 2 IMPLICATIONS FOR WH2 PROTEINS. JRNL REF EMBO J. V. 23 3599 2004 JRNL REFN ISSN 0261-4189 JRNL PMID 15329672 JRNL DOI 10.1038/SJ.EMBOJ.7600372 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 39223 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.144 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2079 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2890 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1270 REMARK 3 BIN FREE R VALUE SET COUNT : 140 REMARK 3 BIN FREE R VALUE : 0.1960 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3959 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 427 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.14000 REMARK 3 B22 (A**2) : -0.42000 REMARK 3 B33 (A**2) : -0.66000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.35000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.134 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.085 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.957 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4082 ; 0.014 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 3627 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5535 ; 1.434 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8473 ; 0.868 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 499 ; 5.574 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 603 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4512 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 809 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 784 ; 0.203 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4127 ; 0.245 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 2242 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 304 ; 0.162 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 15 ; 0.078 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 3 ; 0.068 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 42 ; 0.252 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 19 ; 0.106 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2494 ; 0.969 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4025 ; 1.629 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1588 ; 2.950 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1510 ; 4.545 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 32 REMARK 3 RESIDUE RANGE : A 71 A 136 REMARK 3 RESIDUE RANGE : A 337 A 375 REMARK 3 RESIDUE RANGE : A 700 A 700 REMARK 3 ORIGIN FOR THE GROUP (A): 13.2700 -8.4420 23.0340 REMARK 3 T TENSOR REMARK 3 T11: 0.0634 T22: 0.1292 REMARK 3 T33: 0.1194 T12: -0.0043 REMARK 3 T13: 0.0115 T23: -0.0121 REMARK 3 L TENSOR REMARK 3 L11: 0.5605 L22: 1.1180 REMARK 3 L33: 1.1494 L12: 0.1648 REMARK 3 L13: -0.2891 L23: 0.1821 REMARK 3 S TENSOR REMARK 3 S11: -0.0190 S12: -0.0111 S13: -0.0442 REMARK 3 S21: -0.0277 S22: 0.0356 S23: -0.1174 REMARK 3 S31: 0.0297 S32: 0.0954 S33: -0.0166 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 33 A 70 REMARK 3 ORIGIN FOR THE GROUP (A): 18.5280 1.1990 3.7080 REMARK 3 T TENSOR REMARK 3 T11: 0.0516 T22: 0.1358 REMARK 3 T33: 0.0745 T12: -0.0136 REMARK 3 T13: 0.0600 T23: -0.0263 REMARK 3 L TENSOR REMARK 3 L11: 3.4305 L22: 8.0116 REMARK 3 L33: 2.9583 L12: 1.4418 REMARK 3 L13: -0.6866 L23: -1.3148 REMARK 3 S TENSOR REMARK 3 S11: 0.1536 S12: 0.1717 S13: 0.0814 REMARK 3 S21: -0.1824 S22: -0.0247 S23: -0.3562 REMARK 3 S31: 0.0883 S32: 0.2529 S33: -0.1289 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 137 A 180 REMARK 3 RESIDUE RANGE : A 274 A 336 REMARK 3 ORIGIN FOR THE GROUP (A): -10.5150 -0.4510 22.7710 REMARK 3 T TENSOR REMARK 3 T11: 0.0833 T22: 0.1425 REMARK 3 T33: 0.1016 T12: -0.0118 REMARK 3 T13: 0.0025 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: 0.8275 L22: 0.7237 REMARK 3 L33: 1.2282 L12: -0.0942 REMARK 3 L13: 0.0683 L23: -0.1121 REMARK 3 S TENSOR REMARK 3 S11: -0.0133 S12: 0.0317 S13: 0.0173 REMARK 3 S21: -0.0227 S22: 0.0288 S23: 0.0389 REMARK 3 S31: 0.0466 S32: -0.0964 S33: -0.0155 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 181 A 273 REMARK 3 RESIDUE RANGE : A 900 A 900 REMARK 3 ORIGIN FOR THE GROUP (A): -4.7810 13.5290 3.1250 REMARK 3 T TENSOR REMARK 3 T11: 0.1104 T22: 0.1341 REMARK 3 T33: 0.0662 T12: -0.0016 REMARK 3 T13: 0.0049 T23: 0.0351 REMARK 3 L TENSOR REMARK 3 L11: 0.9088 L22: 1.1919 REMARK 3 L33: 1.0628 L12: -0.1035 REMARK 3 L13: -0.3906 L23: -0.3899 REMARK 3 S TENSOR REMARK 3 S11: 0.0332 S12: 0.0584 S13: 0.0367 REMARK 3 S21: -0.1388 S22: -0.0017 S23: -0.0331 REMARK 3 S31: -0.0100 S32: -0.0762 S33: -0.0315 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 28 G 152 REMARK 3 RESIDUE RANGE : G 701 G 702 REMARK 3 ORIGIN FOR THE GROUP (A): -2.8120 -1.7860 47.4380 REMARK 3 T TENSOR REMARK 3 T11: 0.1344 T22: 0.1038 REMARK 3 T33: 0.0792 T12: 0.0056 REMARK 3 T13: 0.0027 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.6797 L22: 1.5906 REMARK 3 L33: 0.9111 L12: 0.4544 REMARK 3 L13: -0.2006 L23: -0.0675 REMARK 3 S TENSOR REMARK 3 S11: 0.0099 S12: -0.0591 S13: -0.0098 REMARK 3 S21: 0.1737 S22: 0.0096 S23: 0.0193 REMARK 3 S31: 0.0130 S32: 0.0458 S33: -0.0195 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 153 G 171 REMARK 3 ORIGIN FOR THE GROUP (A): 15.5960 12.6590 3.6640 REMARK 3 T TENSOR REMARK 3 T11: 0.0940 T22: 0.0756 REMARK 3 T33: 0.1570 T12: 0.0203 REMARK 3 T13: 0.0962 T23: 0.0520 REMARK 3 L TENSOR REMARK 3 L11: 1.0654 L22: 0.9998 REMARK 3 L33: 32.7026 L12: 0.3132 REMARK 3 L13: -1.0000 L23: -4.8265 REMARK 3 S TENSOR REMARK 3 S11: 0.1943 S12: 0.1473 S13: 0.3959 REMARK 3 S21: 0.0083 S22: -0.0160 S23: -0.2443 REMARK 3 S31: -0.0383 S32: 0.3091 S33: -0.1783 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 901 A 1175 REMARK 3 ORIGIN FOR THE GROUP (A): -1.0040 1.3470 25.0510 REMARK 3 T TENSOR REMARK 3 T11: 0.1027 T22: 0.1280 REMARK 3 T33: 0.1012 T12: -0.0148 REMARK 3 T13: -0.0028 T23: 0.0088 REMARK 3 L TENSOR REMARK 3 L11: 0.0662 L22: 0.2688 REMARK 3 L33: 0.3065 L12: -0.0219 REMARK 3 L13: -0.1275 L23: -0.0315 REMARK 3 S TENSOR REMARK 3 S11: 0.0024 S12: 0.0201 S13: 0.0092 REMARK 3 S21: 0.0119 S22: 0.0066 S23: -0.0100 REMARK 3 S31: 0.0121 S32: -0.0104 S33: -0.0090 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1T44 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAY-04. REMARK 100 THE DEPOSITION ID IS D_1000022287. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0052 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39223 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.11400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.19800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1P8Z REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, SODIUM ACETATE, CALCIUM REMARK 280 CHLORIDE, PH 6.5, MICROBATCH, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.66750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY G 25 REMARK 465 SER G 26 REMARK 465 HIS G 27 REMARK 465 ARG A 39 REMARK 465 HIS A 40 REMARK 465 GLN A 41 REMARK 465 GLY A 42 REMARK 465 VAL A 43 REMARK 465 MET A 44 REMARK 465 VAL A 45 REMARK 465 GLY A 46 REMARK 465 MET A 47 REMARK 465 GLY A 48 REMARK 465 GLN A 49 REMARK 465 LYS A 50 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLN G 171 O HOH G 749 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 51 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG A 147 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG A 147 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ASP A 222 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG A 256 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG A 256 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU G 112 30.42 -86.37 REMARK 500 PHE G 125 27.13 -141.50 REMARK 500 LYS G 157 77.47 -101.83 REMARK 500 ALA A 181 -159.45 -151.97 REMARK 500 ASN A 296 55.73 -141.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA G 702 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY G 65 O REMARK 620 2 ASP G 66 OD2 79.8 REMARK 620 3 GLU G 97 OE2 121.7 86.2 REMARK 620 4 GLU G 97 OE1 75.4 100.1 51.8 REMARK 620 5 VAL G 145 O 149.9 88.5 84.7 134.4 REMARK 620 6 HOH G 704 O 80.1 100.6 158.1 144.4 74.8 REMARK 620 7 HOH G 730 O 103.5 170.0 84.1 72.1 92.7 89.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA G 701 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP G 109 OD1 REMARK 620 2 ASP G 109 OD2 49.1 REMARK 620 3 GLY G 114 O 70.9 119.2 REMARK 620 4 ALA G 116 O 79.4 83.7 95.8 REMARK 620 5 HOH G 712 O 78.6 72.9 88.2 154.9 REMARK 620 6 HOH G 724 O 137.1 140.9 77.1 132.6 72.4 REMARK 620 7 HOH G 729 O 138.0 152.3 80.0 74.0 130.9 58.5 REMARK 620 8 GLU A 167 OE1 131.0 81.9 156.3 97.4 88.1 79.5 84.8 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 700 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A 900 O2B REMARK 620 2 ATP A 900 O3G 80.1 REMARK 620 3 HOH A 909 O 171.1 91.2 REMARK 620 4 HOH A 911 O 94.0 77.7 82.4 REMARK 620 5 HOH A 915 O 95.6 70.3 82.9 144.4 REMARK 620 6 HOH A 918 O 91.2 134.1 96.2 148.1 65.8 REMARK 620 7 HOH A 970 O 86.8 152.1 100.3 78.7 136.0 70.2 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA G 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA G 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 900 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1P8Z RELATED DB: PDB REMARK 900 A HYBRID OF THIS PROTEIN WITH THE C-TERMINAL HALF OF THYMOSIN B4 REMARK 999 REMARK 999 SEQUENCE REMARK 999 FUSION OF GELSOLIN DOMAIN 1 FROM HUMAN WITH REMARK 999 C-TERMINAL DOMAIN OF THYMOSIN B4 FROM MOUSE REMARK 999 (SEQUENCE:ETQEKNPLPSKETIEQEKQ) DBREF 1T44 G 28 152 UNP P06396 GELS_HUMAN 55 179 DBREF 1T44 G 153 171 UNP P20065 TYB4_MOUSE 28 46 DBREF 1T44 A 6 375 UNP P02568 ACTS_HUMAN 8 377 SEQADV 1T44 GLY G 25 UNP P06396 CLONING ARTIFACT SEQADV 1T44 SER G 26 UNP P06396 CLONING ARTIFACT SEQADV 1T44 HIS G 27 UNP P06396 CLONING ARTIFACT SEQRES 1 G 147 GLY SER HIS GLU HIS PRO GLU PHE LEU LYS ALA GLY LYS SEQRES 2 G 147 GLU PRO GLY LEU GLN ILE TRP ARG VAL GLU LYS PHE ASP SEQRES 3 G 147 LEU VAL PRO VAL PRO THR ASN LEU TYR GLY ASP PHE PHE SEQRES 4 G 147 THR GLY ASP ALA TYR VAL ILE LEU LYS THR VAL GLN LEU SEQRES 5 G 147 ARG ASN GLY ASN LEU GLN TYR ASP LEU HIS TYR TRP LEU SEQRES 6 G 147 GLY ASN GLU CYS SER GLN ASP GLU SER GLY ALA ALA ALA SEQRES 7 G 147 ILE PHE THR VAL GLN LEU ASP ASP TYR LEU ASN GLY ARG SEQRES 8 G 147 ALA VAL GLN HIS ARG GLU VAL GLN GLY PHE GLU SER ALA SEQRES 9 G 147 THR PHE LEU GLY TYR PHE LYS SER GLY LEU LYS TYR LYS SEQRES 10 G 147 LYS GLY GLY VAL ALA SER GLY PHE LYS HIS VAL GLU THR SEQRES 11 G 147 GLN GLU LYS ASN PRO LEU PRO SER LYS GLU THR ILE GLU SEQRES 12 G 147 GLN GLU LYS GLN SEQRES 1 A 370 THR ALA LEU VAL CYS ASP ASN GLY SER GLY LEU VAL LYS SEQRES 2 A 370 ALA GLY PHE ALA GLY ASP ASP ALA PRO ARG ALA VAL PHE SEQRES 3 A 370 PRO SER ILE VAL GLY ARG PRO ARG HIS GLN GLY VAL MET SEQRES 4 A 370 VAL GLY MET GLY GLN LYS ASP SER TYR VAL GLY ASP GLU SEQRES 5 A 370 ALA GLN SER LYS ARG GLY ILE LEU THR LEU LYS TYR PRO SEQRES 6 A 370 ILE GLU HIS GLY ILE ILE THR ASN TRP ASP ASP MET GLU SEQRES 7 A 370 LYS ILE TRP HIS HIS THR PHE TYR ASN GLU LEU ARG VAL SEQRES 8 A 370 ALA PRO GLU GLU HIS PRO THR LEU LEU THR GLU ALA PRO SEQRES 9 A 370 LEU ASN PRO LYS ALA ASN ARG GLU LYS MET THR GLN ILE SEQRES 10 A 370 MET PHE GLU THR PHE ASN VAL PRO ALA MET TYR VAL ALA SEQRES 11 A 370 ILE GLN ALA VAL LEU SER LEU TYR ALA SER GLY ARG THR SEQRES 12 A 370 THR GLY ILE VAL LEU ASP SER GLY ASP GLY VAL THR HIS SEQRES 13 A 370 ASN VAL PRO ILE TYR GLU GLY TYR ALA LEU PRO HIS ALA SEQRES 14 A 370 ILE MET ARG LEU ASP LEU ALA GLY ARG ASP LEU THR ASP SEQRES 15 A 370 TYR LEU MET LYS ILE LEU THR GLU ARG GLY TYR SER PHE SEQRES 16 A 370 VAL THR THR ALA GLU ARG GLU ILE VAL ARG ASP ILE LYS SEQRES 17 A 370 GLU LYS LEU CYS TYR VAL ALA LEU ASP PHE GLU ASN GLU SEQRES 18 A 370 MET ALA THR ALA ALA SER SER SER SER LEU GLU LYS SER SEQRES 19 A 370 TYR GLU LEU PRO ASP GLY GLN VAL ILE THR ILE GLY ASN SEQRES 20 A 370 GLU ARG PHE ARG CYS PRO GLU THR LEU PHE GLN PRO SER SEQRES 21 A 370 PHE ILE GLY MET GLU SER ALA GLY ILE HIS GLU THR THR SEQRES 22 A 370 TYR ASN SER ILE MET LYS CYS ASP ILE ASP ILE ARG LYS SEQRES 23 A 370 ASP LEU TYR ALA ASN ASN VAL MET SER GLY GLY THR THR SEQRES 24 A 370 MET TYR PRO GLY ILE ALA ASP ARG MET GLN LYS GLU ILE SEQRES 25 A 370 THR ALA LEU ALA PRO SER THR MET LYS ILE LYS ILE ILE SEQRES 26 A 370 ALA PRO PRO GLU ARG LYS TYR SER VAL TRP ILE GLY GLY SEQRES 27 A 370 SER ILE LEU ALA SER LEU SER THR PHE GLN GLN MET TRP SEQRES 28 A 370 ILE THR LYS GLN GLU TYR ASP GLU ALA GLY PRO SER ILE SEQRES 29 A 370 VAL HIS ARG LYS CYS PHE HET CA G 701 1 HET CA G 702 1 HET CA A 700 1 HET ATP A 900 31 HETNAM CA CALCIUM ION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE FORMUL 3 CA 3(CA 2+) FORMUL 6 ATP C10 H16 N5 O13 P3 FORMUL 7 HOH *427(H2 O) HELIX 1 1 HIS G 29 ALA G 35 1 7 HELIX 2 2 PRO G 55 TYR G 59 5 5 HELIX 3 3 SER G 94 LEU G 112 1 19 HELIX 4 4 SER G 127 GLY G 132 1 6 HELIX 5 5 SER G 162 GLN G 171 1 10 HELIX 6 6 GLY A 55 LYS A 61 1 7 HELIX 7 7 ARG A 62 LEU A 65 5 4 HELIX 8 8 ASN A 78 ASN A 92 1 15 HELIX 9 9 ALA A 97 HIS A 101 5 5 HELIX 10 10 PRO A 112 THR A 126 1 15 HELIX 11 11 GLN A 137 SER A 145 1 9 HELIX 12 12 PRO A 172 ILE A 175 5 4 HELIX 13 13 ALA A 181 ARG A 196 1 16 HELIX 14 14 THR A 202 CYS A 217 1 16 HELIX 15 15 ASP A 222 SER A 233 1 12 HELIX 16 16 ASN A 252 THR A 260 1 9 HELIX 17 17 LEU A 261 PHE A 262 5 2 HELIX 18 18 GLN A 263 GLY A 268 5 6 HELIX 19 19 GLY A 273 LYS A 284 1 12 HELIX 20 20 ASP A 286 ALA A 295 1 10 HELIX 21 21 GLY A 301 MET A 305 5 5 HELIX 22 22 GLY A 308 ALA A 321 1 14 HELIX 23 23 GLU A 334 LYS A 336 5 3 HELIX 24 24 TYR A 337 LEU A 349 1 13 HELIX 25 25 SER A 350 GLN A 353 5 4 HELIX 26 26 LYS A 359 GLY A 366 1 8 HELIX 27 27 ILE A 369 CYS A 374 1 6 SHEET 1 A 5 ASP G 50 PRO G 53 0 SHEET 2 A 5 GLY G 40 GLU G 47 -1 N ARG G 45 O VAL G 52 SHEET 3 A 5 ALA G 67 GLN G 75 -1 O VAL G 69 N TRP G 44 SHEET 4 A 5 LEU G 81 LEU G 89 -1 O GLN G 82 N VAL G 74 SHEET 5 A 5 VAL G 117 VAL G 122 1 O GLU G 121 N TYR G 87 SHEET 1 B 2 ASP G 61 PHE G 63 0 SHEET 2 B 2 LYS G 139 LYS G 141 1 O LYS G 139 N PHE G 62 SHEET 1 C 7 GLN G 155 GLU G 156 0 SHEET 2 C 7 ALA A 29 PRO A 32 1 O VAL A 30 N GLN G 155 SHEET 3 C 7 LEU A 16 PHE A 21 -1 N VAL A 17 O PHE A 31 SHEET 4 C 7 LEU A 8 ASN A 12 -1 N ASP A 11 O LYS A 18 SHEET 5 C 7 THR A 103 GLU A 107 1 O LEU A 104 N LEU A 8 SHEET 6 C 7 ALA A 131 ILE A 136 1 O TYR A 133 N LEU A 105 SHEET 7 C 7 ILE A 357 THR A 358 -1 O ILE A 357 N MET A 132 SHEET 1 D 3 TYR A 53 VAL A 54 0 SHEET 2 D 3 VAL A 35 ARG A 37 -1 N GLY A 36 O TYR A 53 SHEET 3 D 3 THR A 66 LYS A 68 -1 O THR A 66 N ARG A 37 SHEET 1 E 2 ILE A 71 GLU A 72 0 SHEET 2 E 2 ILE A 75 ILE A 76 -1 O ILE A 75 N GLU A 72 SHEET 1 F 3 TYR A 169 ALA A 170 0 SHEET 2 F 3 THR A 160 TYR A 166 -1 N TYR A 166 O TYR A 169 SHEET 3 F 3 MET A 176 LEU A 178 -1 O LEU A 178 N THR A 160 SHEET 1 G 5 TYR A 169 ALA A 170 0 SHEET 2 G 5 THR A 160 TYR A 166 -1 N TYR A 166 O TYR A 169 SHEET 3 G 5 GLY A 150 SER A 155 -1 N GLY A 150 O ILE A 165 SHEET 4 G 5 ASN A 297 SER A 300 1 O SER A 300 N LEU A 153 SHEET 5 G 5 ILE A 329 ILE A 330 1 O ILE A 330 N ASN A 297 SHEET 1 H 2 LYS A 238 GLU A 241 0 SHEET 2 H 2 VAL A 247 ILE A 250 -1 O ILE A 248 N TYR A 240 LINK O GLY G 65 CA CA G 702 1555 1555 2.33 LINK OD2 ASP G 66 CA CA G 702 1555 1555 2.34 LINK OE2 GLU G 97 CA CA G 702 1555 1555 2.46 LINK OE1 GLU G 97 CA CA G 702 1555 1555 2.53 LINK OD1 ASP G 109 CA CA G 701 1555 1555 2.75 LINK OD2 ASP G 109 CA CA G 701 1555 1555 2.36 LINK O GLY G 114 CA CA G 701 1555 1555 2.43 LINK O ALA G 116 CA CA G 701 1555 1555 2.31 LINK O VAL G 145 CA CA G 702 1555 1555 2.34 LINK CA CA G 701 O HOH G 712 1555 1555 2.40 LINK CA CA G 701 O HOH G 724 1555 1555 2.61 LINK CA CA G 701 O HOH G 729 1555 1555 2.42 LINK CA CA G 701 OE1 GLU A 167 1555 1555 2.31 LINK CA CA G 702 O HOH G 704 1555 1555 2.32 LINK CA CA G 702 O HOH G 730 1555 1555 2.33 LINK CA CA A 700 O2B ATP A 900 1555 1555 2.30 LINK CA CA A 700 O3G ATP A 900 1555 1555 2.41 LINK CA CA A 700 O HOH A 909 1555 1555 2.38 LINK CA CA A 700 O HOH A 911 1555 1555 2.43 LINK CA CA A 700 O HOH A 915 1555 1555 2.75 LINK CA CA A 700 O HOH A 918 1555 1555 2.36 LINK CA CA A 700 O HOH A 970 1555 1555 2.38 SITE 1 AC1 6 ATP A 900 HOH A 909 HOH A 911 HOH A 915 SITE 2 AC1 6 HOH A 918 HOH A 970 SITE 1 AC2 7 GLU A 167 ASP G 109 GLY G 114 ALA G 116 SITE 2 AC2 7 HOH G 712 HOH G 724 HOH G 729 SITE 1 AC3 6 GLY G 65 ASP G 66 GLU G 97 VAL G 145 SITE 2 AC3 6 HOH G 704 HOH G 730 SITE 1 AC4 26 GLY A 13 SER A 14 GLY A 15 LEU A 16 SITE 2 AC4 26 LYS A 18 GLY A 156 ASP A 157 GLY A 158 SITE 3 AC4 26 VAL A 159 GLY A 182 ARG A 210 LYS A 213 SITE 4 AC4 26 GLU A 214 GLY A 301 GLY A 302 THR A 303 SITE 5 AC4 26 MET A 305 TYR A 306 CA A 700 HOH A 904 SITE 6 AC4 26 HOH A 911 HOH A 915 HOH A 949 HOH A 992 SITE 7 AC4 26 HOH A 999 HOH A1022 CRYST1 56.850 69.335 80.233 90.00 94.93 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017590 0.000000 0.001517 0.00000 SCALE2 0.000000 0.014423 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012510 0.00000