data_1T55 # _entry.id 1T55 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1T55 pdb_00001t55 10.2210/pdb1t55/pdb RCSB RCSB022324 ? ? WWPDB D_1000022324 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-10-19 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-11-10 5 'Structure model' 1 4 2024-11-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_ref_seq_dif 8 4 'Structure model' struct_site 9 5 'Structure model' chem_comp_atom 10 5 'Structure model' chem_comp_bond 11 5 'Structure model' pdbx_entry_details 12 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 4 'Structure model' '_struct_ref_seq_dif.details' 7 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1T55 _pdbx_database_status.recvd_initial_deposition_date 2004-05-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1T51 'the same protein of wild type' unspecified PDB 1T52 'the same protein with E7K mutant' unspecified PDB 1T54 'the same protein with W6A mutant' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lee, K.' 1 'Shin, S.Y.' 2 'Kim, K.' 3 'Lim, S.S.' 4 'Hahm, K.S.' 5 'Kim, Y.' 6 # _citation.id primary _citation.title 'Antibiotic activity and structural analysis of the scorpion-derived antimicrobial peptide IsCT and its analogs' _citation.journal_abbrev Biochem.Biophys.Res.Commun. _citation.journal_volume 323 _citation.page_first 712 _citation.page_last 719 _citation.year 2004 _citation.journal_id_ASTM BBRCA9 _citation.country US _citation.journal_id_ISSN 0006-291X _citation.journal_id_CSD 0146 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15369808 _citation.pdbx_database_id_DOI 10.1016/j.bbrc.2004.08.144 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lee, K.' 1 ? primary 'Shin, S.Y.' 2 ? primary 'Kim, K.' 3 ? primary 'Lim, S.S.' 4 ? primary 'Hahm, K.S.' 5 ? primary 'Kim, Y.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Cytotoxic linear peptide IsCT' _entity.formula_weight 1586.081 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation 'E7K, G8P, S11K' _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name IsCT # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'ILGKIWKPIKKLF(NH2)' _entity_poly.pdbx_seq_one_letter_code_can ILGKIWKPIKKLFX _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 LEU n 1 3 GLY n 1 4 LYS n 1 5 ILE n 1 6 TRP n 1 7 LYS n 1 8 PRO n 1 9 ILE n 1 10 LYS n 1 11 LYS n 1 12 LEU n 1 13 PHE n 1 14 NH2 n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Opisthacanthus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue Venom _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Opisthacanthus madagascariensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 167108 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 1 1 ILE ILE A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 TRP 6 6 6 TRP TRP A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 PHE 13 13 13 PHE PHE A . n A 1 14 NH2 14 14 14 NH2 NH2 A . n # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 7 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id ILE _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id CA _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id ILE _pdbx_unobs_or_zero_occ_atoms.label_seq_id 1 _pdbx_unobs_or_zero_occ_atoms.label_atom_id CA # _exptl.entry_id 1T55 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _database_PDB_matrix.entry_id 1T55 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1T55 _struct.title 'Antibiotic Activity and Structural Analysis of a Scorpion-derived Antimicrobial peptide IsCT and Its Analogs' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1T55 _struct_keywords.pdbx_keywords ANTIBIOTIC _struct_keywords.text 'coil-helix, ANTIBIOTIC' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TXT1_OPIMA _struct_ref.pdbx_db_accession Q8MMJ7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ILGKIWEGIKSLF _struct_ref.pdbx_align_begin 24 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1T55 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 13 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8MMJ7 _struct_ref_seq.db_align_beg 24 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 36 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 13 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1T55 LYS A 7 ? UNP Q8MMJ7 GLU 30 'engineered mutation' 7 1 1 1T55 PRO A 8 ? UNP Q8MMJ7 GLY 31 'engineered mutation' 8 2 1 1T55 LYS A 11 ? UNP Q8MMJ7 SER 34 'engineered mutation' 11 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id PRO _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 8 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id PHE _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 13 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id PRO _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 8 _struct_conf.end_auth_comp_id PHE _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 13 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag both _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id PHE _struct_conn.ptnr1_label_seq_id 13 _struct_conn.ptnr1_label_atom_id C _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id NH2 _struct_conn.ptnr2_label_seq_id 14 _struct_conn.ptnr2_label_atom_id N _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id PHE _struct_conn.ptnr1_auth_seq_id 13 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id NH2 _struct_conn.ptnr2_auth_seq_id 14 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.305 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id NH2 _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 14 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id PHE _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 13 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id NH2 _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 14 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id PHE _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 13 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom . _pdbx_modification_feature.modified_residue_id_linking_atom . _pdbx_modification_feature.modified_residue_id PHE _pdbx_modification_feature.ref_pcm_id 15 _pdbx_modification_feature.ref_comp_id NH2 _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Terminal amidation' # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id NH2 _struct_site.pdbx_auth_seq_id 14 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 1 _struct_site.details 'BINDING SITE FOR RESIDUE NH2 A 14' # _struct_site_gen.id 1 _struct_site_gen.site_id AC1 _struct_site_gen.pdbx_num_res 1 _struct_site_gen.label_comp_id PHE _struct_site_gen.label_asym_id A _struct_site_gen.label_seq_id 13 _struct_site_gen.pdbx_auth_ins_code ? _struct_site_gen.auth_comp_id PHE _struct_site_gen.auth_asym_id A _struct_site_gen.auth_seq_id 13 _struct_site_gen.label_atom_id . _struct_site_gen.label_alt_id ? _struct_site_gen.symmetry 1_555 _struct_site_gen.details ? # _pdbx_entry_details.entry_id 1T55 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 O A GLY 3 ? ? H A TRP 6 ? ? 1.54 2 5 O A PRO 8 ? ? H A LEU 12 ? ? 1.54 3 11 O A GLY 3 ? ? H A TRP 6 ? ? 1.54 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 12 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 LYS _pdbx_validate_rmsd_angle.auth_seq_id_1 7 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 8 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CD _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 8 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 115.15 _pdbx_validate_rmsd_angle.angle_target_value 128.40 _pdbx_validate_rmsd_angle.angle_deviation -13.25 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.10 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 2 ? ? -112.68 -89.51 2 2 LEU A 2 ? ? -65.47 -172.72 3 2 TRP A 6 ? ? -143.27 -45.60 4 3 LEU A 2 ? ? 58.50 148.45 5 3 TRP A 6 ? ? -143.27 -37.94 6 4 LEU A 12 ? ? -167.37 64.29 7 5 LEU A 2 ? ? -83.07 -144.83 8 7 LEU A 12 ? ? -170.87 40.16 9 8 LEU A 2 ? ? -42.68 -89.10 10 9 LEU A 2 ? ? 56.58 164.10 11 9 ILE A 5 ? ? -144.41 13.16 12 10 LEU A 2 ? ? -144.97 -37.27 13 10 ILE A 5 ? ? -142.62 13.83 14 11 LEU A 2 ? ? 60.54 -84.81 15 12 LEU A 2 ? ? -42.40 -90.29 16 12 LYS A 4 ? ? -79.96 47.69 17 12 ILE A 5 ? ? -152.65 -36.69 18 12 TRP A 6 ? ? -145.10 -36.57 19 13 LEU A 2 ? ? 58.80 -85.55 20 14 LEU A 2 ? ? 50.42 -89.83 21 14 ILE A 5 ? ? -143.96 40.09 22 14 TRP A 6 ? ? -148.12 -37.83 23 16 LEU A 2 ? ? 51.90 -164.45 24 17 LEU A 2 ? ? -55.83 -163.79 25 18 TRP A 6 ? ? -145.75 -35.99 26 19 LEU A 2 ? ? -108.82 -169.86 27 19 ILE A 5 ? ? -145.81 20.67 28 20 ILE A 5 ? ? -142.84 24.88 29 20 TRP A 6 ? ? -137.98 -36.78 # _pdbx_nmr_ensemble.entry_id 1T55 _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1T55 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.0mM Peptide; 200mM SDS-d25' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 308 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 4.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY' 2 1 1 '2D TOCSY' 3 1 1 DQF-COSY # _pdbx_nmr_details.entry_id 1T55 _pdbx_nmr_details.text 'This structure was determined using standard 2D homonuclear techniques.' # _pdbx_nmr_refine.entry_id 1T55 _pdbx_nmr_refine.method 'distance geometry, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal Felix 2000.1 processing ? 1 X-PLOR 3.851 'structure solution' Brunger 2 DGII 2000.1 refinement HAVEL 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal GLU N N N N 1 GLU CA C N S 2 GLU C C N N 3 GLU O O N N 4 GLU CB C N N 5 GLU CG C N N 6 GLU CD C N N 7 GLU OE1 O N N 8 GLU OE2 O N N 9 GLU OXT O N N 10 GLU H H N N 11 GLU H2 H N N 12 GLU HA H N N 13 GLU HB2 H N N 14 GLU HB3 H N N 15 GLU HG2 H N N 16 GLU HG3 H N N 17 GLU HE2 H N N 18 GLU HXT H N N 19 GLY N N N N 20 GLY CA C N N 21 GLY C C N N 22 GLY O O N N 23 GLY OXT O N N 24 GLY H H N N 25 GLY H2 H N N 26 GLY HA2 H N N 27 GLY HA3 H N N 28 GLY HXT H N N 29 ILE N N N N 30 ILE CA C N S 31 ILE C C N N 32 ILE O O N N 33 ILE CB C N S 34 ILE CG1 C N N 35 ILE CG2 C N N 36 ILE CD1 C N N 37 ILE OXT O N N 38 ILE H H N N 39 ILE H2 H N N 40 ILE HA H N N 41 ILE HB H N N 42 ILE HG12 H N N 43 ILE HG13 H N N 44 ILE HG21 H N N 45 ILE HG22 H N N 46 ILE HG23 H N N 47 ILE HD11 H N N 48 ILE HD12 H N N 49 ILE HD13 H N N 50 ILE HXT H N N 51 LEU N N N N 52 LEU CA C N S 53 LEU C C N N 54 LEU O O N N 55 LEU CB C N N 56 LEU CG C N N 57 LEU CD1 C N N 58 LEU CD2 C N N 59 LEU OXT O N N 60 LEU H H N N 61 LEU H2 H N N 62 LEU HA H N N 63 LEU HB2 H N N 64 LEU HB3 H N N 65 LEU HG H N N 66 LEU HD11 H N N 67 LEU HD12 H N N 68 LEU HD13 H N N 69 LEU HD21 H N N 70 LEU HD22 H N N 71 LEU HD23 H N N 72 LEU HXT H N N 73 LYS N N N N 74 LYS CA C N S 75 LYS C C N N 76 LYS O O N N 77 LYS CB C N N 78 LYS CG C N N 79 LYS CD C N N 80 LYS CE C N N 81 LYS NZ N N N 82 LYS OXT O N N 83 LYS H H N N 84 LYS H2 H N N 85 LYS HA H N N 86 LYS HB2 H N N 87 LYS HB3 H N N 88 LYS HG2 H N N 89 LYS HG3 H N N 90 LYS HD2 H N N 91 LYS HD3 H N N 92 LYS HE2 H N N 93 LYS HE3 H N N 94 LYS HZ1 H N N 95 LYS HZ2 H N N 96 LYS HZ3 H N N 97 LYS HXT H N N 98 NH2 N N N N 99 NH2 HN1 H N N 100 NH2 HN2 H N N 101 PHE N N N N 102 PHE CA C N S 103 PHE C C N N 104 PHE O O N N 105 PHE CB C N N 106 PHE CG C Y N 107 PHE CD1 C Y N 108 PHE CD2 C Y N 109 PHE CE1 C Y N 110 PHE CE2 C Y N 111 PHE CZ C Y N 112 PHE OXT O N N 113 PHE H H N N 114 PHE H2 H N N 115 PHE HA H N N 116 PHE HB2 H N N 117 PHE HB3 H N N 118 PHE HD1 H N N 119 PHE HD2 H N N 120 PHE HE1 H N N 121 PHE HE2 H N N 122 PHE HZ H N N 123 PHE HXT H N N 124 PRO N N N N 125 PRO CA C N S 126 PRO C C N N 127 PRO O O N N 128 PRO CB C N N 129 PRO CG C N N 130 PRO CD C N N 131 PRO OXT O N N 132 PRO H H N N 133 PRO HA H N N 134 PRO HB2 H N N 135 PRO HB3 H N N 136 PRO HG2 H N N 137 PRO HG3 H N N 138 PRO HD2 H N N 139 PRO HD3 H N N 140 PRO HXT H N N 141 SER N N N N 142 SER CA C N S 143 SER C C N N 144 SER O O N N 145 SER CB C N N 146 SER OG O N N 147 SER OXT O N N 148 SER H H N N 149 SER H2 H N N 150 SER HA H N N 151 SER HB2 H N N 152 SER HB3 H N N 153 SER HG H N N 154 SER HXT H N N 155 TRP N N N N 156 TRP CA C N S 157 TRP C C N N 158 TRP O O N N 159 TRP CB C N N 160 TRP CG C Y N 161 TRP CD1 C Y N 162 TRP CD2 C Y N 163 TRP NE1 N Y N 164 TRP CE2 C Y N 165 TRP CE3 C Y N 166 TRP CZ2 C Y N 167 TRP CZ3 C Y N 168 TRP CH2 C Y N 169 TRP OXT O N N 170 TRP H H N N 171 TRP H2 H N N 172 TRP HA H N N 173 TRP HB2 H N N 174 TRP HB3 H N N 175 TRP HD1 H N N 176 TRP HE1 H N N 177 TRP HE3 H N N 178 TRP HZ2 H N N 179 TRP HZ3 H N N 180 TRP HH2 H N N 181 TRP HXT H N N 182 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GLU N CA sing N N 1 GLU N H sing N N 2 GLU N H2 sing N N 3 GLU CA C sing N N 4 GLU CA CB sing N N 5 GLU CA HA sing N N 6 GLU C O doub N N 7 GLU C OXT sing N N 8 GLU CB CG sing N N 9 GLU CB HB2 sing N N 10 GLU CB HB3 sing N N 11 GLU CG CD sing N N 12 GLU CG HG2 sing N N 13 GLU CG HG3 sing N N 14 GLU CD OE1 doub N N 15 GLU CD OE2 sing N N 16 GLU OE2 HE2 sing N N 17 GLU OXT HXT sing N N 18 GLY N CA sing N N 19 GLY N H sing N N 20 GLY N H2 sing N N 21 GLY CA C sing N N 22 GLY CA HA2 sing N N 23 GLY CA HA3 sing N N 24 GLY C O doub N N 25 GLY C OXT sing N N 26 GLY OXT HXT sing N N 27 ILE N CA sing N N 28 ILE N H sing N N 29 ILE N H2 sing N N 30 ILE CA C sing N N 31 ILE CA CB sing N N 32 ILE CA HA sing N N 33 ILE C O doub N N 34 ILE C OXT sing N N 35 ILE CB CG1 sing N N 36 ILE CB CG2 sing N N 37 ILE CB HB sing N N 38 ILE CG1 CD1 sing N N 39 ILE CG1 HG12 sing N N 40 ILE CG1 HG13 sing N N 41 ILE CG2 HG21 sing N N 42 ILE CG2 HG22 sing N N 43 ILE CG2 HG23 sing N N 44 ILE CD1 HD11 sing N N 45 ILE CD1 HD12 sing N N 46 ILE CD1 HD13 sing N N 47 ILE OXT HXT sing N N 48 LEU N CA sing N N 49 LEU N H sing N N 50 LEU N H2 sing N N 51 LEU CA C sing N N 52 LEU CA CB sing N N 53 LEU CA HA sing N N 54 LEU C O doub N N 55 LEU C OXT sing N N 56 LEU CB CG sing N N 57 LEU CB HB2 sing N N 58 LEU CB HB3 sing N N 59 LEU CG CD1 sing N N 60 LEU CG CD2 sing N N 61 LEU CG HG sing N N 62 LEU CD1 HD11 sing N N 63 LEU CD1 HD12 sing N N 64 LEU CD1 HD13 sing N N 65 LEU CD2 HD21 sing N N 66 LEU CD2 HD22 sing N N 67 LEU CD2 HD23 sing N N 68 LEU OXT HXT sing N N 69 LYS N CA sing N N 70 LYS N H sing N N 71 LYS N H2 sing N N 72 LYS CA C sing N N 73 LYS CA CB sing N N 74 LYS CA HA sing N N 75 LYS C O doub N N 76 LYS C OXT sing N N 77 LYS CB CG sing N N 78 LYS CB HB2 sing N N 79 LYS CB HB3 sing N N 80 LYS CG CD sing N N 81 LYS CG HG2 sing N N 82 LYS CG HG3 sing N N 83 LYS CD CE sing N N 84 LYS CD HD2 sing N N 85 LYS CD HD3 sing N N 86 LYS CE NZ sing N N 87 LYS CE HE2 sing N N 88 LYS CE HE3 sing N N 89 LYS NZ HZ1 sing N N 90 LYS NZ HZ2 sing N N 91 LYS NZ HZ3 sing N N 92 LYS OXT HXT sing N N 93 NH2 N HN1 sing N N 94 NH2 N HN2 sing N N 95 PHE N CA sing N N 96 PHE N H sing N N 97 PHE N H2 sing N N 98 PHE CA C sing N N 99 PHE CA CB sing N N 100 PHE CA HA sing N N 101 PHE C O doub N N 102 PHE C OXT sing N N 103 PHE CB CG sing N N 104 PHE CB HB2 sing N N 105 PHE CB HB3 sing N N 106 PHE CG CD1 doub Y N 107 PHE CG CD2 sing Y N 108 PHE CD1 CE1 sing Y N 109 PHE CD1 HD1 sing N N 110 PHE CD2 CE2 doub Y N 111 PHE CD2 HD2 sing N N 112 PHE CE1 CZ doub Y N 113 PHE CE1 HE1 sing N N 114 PHE CE2 CZ sing Y N 115 PHE CE2 HE2 sing N N 116 PHE CZ HZ sing N N 117 PHE OXT HXT sing N N 118 PRO N CA sing N N 119 PRO N CD sing N N 120 PRO N H sing N N 121 PRO CA C sing N N 122 PRO CA CB sing N N 123 PRO CA HA sing N N 124 PRO C O doub N N 125 PRO C OXT sing N N 126 PRO CB CG sing N N 127 PRO CB HB2 sing N N 128 PRO CB HB3 sing N N 129 PRO CG CD sing N N 130 PRO CG HG2 sing N N 131 PRO CG HG3 sing N N 132 PRO CD HD2 sing N N 133 PRO CD HD3 sing N N 134 PRO OXT HXT sing N N 135 SER N CA sing N N 136 SER N H sing N N 137 SER N H2 sing N N 138 SER CA C sing N N 139 SER CA CB sing N N 140 SER CA HA sing N N 141 SER C O doub N N 142 SER C OXT sing N N 143 SER CB OG sing N N 144 SER CB HB2 sing N N 145 SER CB HB3 sing N N 146 SER OG HG sing N N 147 SER OXT HXT sing N N 148 TRP N CA sing N N 149 TRP N H sing N N 150 TRP N H2 sing N N 151 TRP CA C sing N N 152 TRP CA CB sing N N 153 TRP CA HA sing N N 154 TRP C O doub N N 155 TRP C OXT sing N N 156 TRP CB CG sing N N 157 TRP CB HB2 sing N N 158 TRP CB HB3 sing N N 159 TRP CG CD1 doub Y N 160 TRP CG CD2 sing Y N 161 TRP CD1 NE1 sing Y N 162 TRP CD1 HD1 sing N N 163 TRP CD2 CE2 doub Y N 164 TRP CD2 CE3 sing Y N 165 TRP NE1 CE2 sing Y N 166 TRP NE1 HE1 sing N N 167 TRP CE2 CZ2 sing Y N 168 TRP CE3 CZ3 doub Y N 169 TRP CE3 HE3 sing N N 170 TRP CZ2 CH2 doub Y N 171 TRP CZ2 HZ2 sing N N 172 TRP CZ3 CH2 sing Y N 173 TRP CZ3 HZ3 sing N N 174 TRP CH2 HH2 sing N N 175 TRP OXT HXT sing N N 176 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.field_strength 400 # _atom_sites.entry_id 1T55 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_