data_1T5Y # _entry.id 1T5Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1T5Y RCSB RCSB022353 WWPDB D_1000022353 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id HR2118 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1T5Y _pdbx_database_status.recvd_initial_deposition_date 2004-05-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kuzin, A.P.' 1 'Chen, Y.' 2 'Forouhar, F.' 3 'Acton, T.B.' 4 'Shastry, R.' 5 'Ma, L.-C.' 6 'Cooper, B.' 7 'Xiao, R.' 8 'Montelione, G.' 9 'Tong, L.' 10 'Hunt, J.F.' 11 'Northeast Structural Genomics Consortium (NESG)' 12 # _citation.id primary _citation.title ;Crystal Structure of Northeast Structural Genomics Consortium Target HR2118: A Human Homolog of Saccharomyces cerevisiae Nip7p ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Kuzin, A.P.' 1 primary 'Chen, Y.' 2 primary 'Forouhar, F.' 3 primary 'Acton, T.B.' 4 primary 'Shastry, R.' 5 primary 'Ma, L.-C.' 6 primary 'Cooper, B.' 7 primary 'Xiao, R.' 8 primary 'Montelione, G.' 9 primary 'Tong, L.' 10 primary 'Hunt, J.F.' 11 # _cell.entry_id 1T5Y _cell.length_a 58.030 _cell.length_b 58.030 _cell.length_c 132.690 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1T5Y _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SACCHAROMYCES CEREVISIAE Nip7p HOMOLOG' 22015.357 1 ? ? ? ? 2 water nat water 18.015 49 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name HR2118 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GHHHHHHSH(MSE)RPLTEEETRV(MSE)FEKIAKYIGENLQLLVDRPDGTYCFRLHNDRVYYVSEKI(MSE)KL AANISGDKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVY S(MSE)ADIPLGFGVAAKSTQDCRKVDP(MSE)AIVVFHQADIGEYVRHEETLT ; _entity_poly.pdbx_seq_one_letter_code_can ;MGHHHHHHSHMRPLTEEETRVMFEKIAKYIGENLQLLVDRPDGTYCFRLHNDRVYYVSEKIMKLAANISGDKLVSLGTCF GKFTKTHKFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADIPLGFGVAAKST QDCRKVDPMAIVVFHQADIGEYVRHEETLT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier HR2118 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 SER n 1 10 HIS n 1 11 MSE n 1 12 ARG n 1 13 PRO n 1 14 LEU n 1 15 THR n 1 16 GLU n 1 17 GLU n 1 18 GLU n 1 19 THR n 1 20 ARG n 1 21 VAL n 1 22 MSE n 1 23 PHE n 1 24 GLU n 1 25 LYS n 1 26 ILE n 1 27 ALA n 1 28 LYS n 1 29 TYR n 1 30 ILE n 1 31 GLY n 1 32 GLU n 1 33 ASN n 1 34 LEU n 1 35 GLN n 1 36 LEU n 1 37 LEU n 1 38 VAL n 1 39 ASP n 1 40 ARG n 1 41 PRO n 1 42 ASP n 1 43 GLY n 1 44 THR n 1 45 TYR n 1 46 CYS n 1 47 PHE n 1 48 ARG n 1 49 LEU n 1 50 HIS n 1 51 ASN n 1 52 ASP n 1 53 ARG n 1 54 VAL n 1 55 TYR n 1 56 TYR n 1 57 VAL n 1 58 SER n 1 59 GLU n 1 60 LYS n 1 61 ILE n 1 62 MSE n 1 63 LYS n 1 64 LEU n 1 65 ALA n 1 66 ALA n 1 67 ASN n 1 68 ILE n 1 69 SER n 1 70 GLY n 1 71 ASP n 1 72 LYS n 1 73 LEU n 1 74 VAL n 1 75 SER n 1 76 LEU n 1 77 GLY n 1 78 THR n 1 79 CYS n 1 80 PHE n 1 81 GLY n 1 82 LYS n 1 83 PHE n 1 84 THR n 1 85 LYS n 1 86 THR n 1 87 HIS n 1 88 LYS n 1 89 PHE n 1 90 ARG n 1 91 LEU n 1 92 HIS n 1 93 VAL n 1 94 THR n 1 95 ALA n 1 96 LEU n 1 97 ASP n 1 98 TYR n 1 99 LEU n 1 100 ALA n 1 101 PRO n 1 102 TYR n 1 103 ALA n 1 104 LYS n 1 105 TYR n 1 106 LYS n 1 107 VAL n 1 108 TRP n 1 109 ILE n 1 110 LYS n 1 111 PRO n 1 112 GLY n 1 113 ALA n 1 114 GLU n 1 115 GLN n 1 116 SER n 1 117 PHE n 1 118 LEU n 1 119 TYR n 1 120 GLY n 1 121 ASN n 1 122 HIS n 1 123 VAL n 1 124 LEU n 1 125 LYS n 1 126 SER n 1 127 GLY n 1 128 LEU n 1 129 GLY n 1 130 ARG n 1 131 ILE n 1 132 THR n 1 133 GLU n 1 134 ASN n 1 135 THR n 1 136 SER n 1 137 GLN n 1 138 TYR n 1 139 GLN n 1 140 GLY n 1 141 VAL n 1 142 VAL n 1 143 VAL n 1 144 TYR n 1 145 SER n 1 146 MSE n 1 147 ALA n 1 148 ASP n 1 149 ILE n 1 150 PRO n 1 151 LEU n 1 152 GLY n 1 153 PHE n 1 154 GLY n 1 155 VAL n 1 156 ALA n 1 157 ALA n 1 158 LYS n 1 159 SER n 1 160 THR n 1 161 GLN n 1 162 ASP n 1 163 CYS n 1 164 ARG n 1 165 LYS n 1 166 VAL n 1 167 ASP n 1 168 PRO n 1 169 MSE n 1 170 ALA n 1 171 ILE n 1 172 VAL n 1 173 VAL n 1 174 PHE n 1 175 HIS n 1 176 GLN n 1 177 ALA n 1 178 ASP n 1 179 ILE n 1 180 GLY n 1 181 GLU n 1 182 TYR n 1 183 VAL n 1 184 ARG n 1 185 HIS n 1 186 GLU n 1 187 GLU n 1 188 THR n 1 189 LEU n 1 190 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NIP7_HUMAN _struct_ref.pdbx_db_accession Q9Y221 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRPLTEEETRVMFEKIAKYIGENLQLLVDRPDGTYCFRLHNDRVYYVSEKIMKLAANISGDKLVSLGTCFGKFTKTHKFR LHVTALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADIPLGFGVAAKSTQDCRKVDPMA IVVFHQADIGEYVRHEETLT ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1T5Y _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 11 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 190 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9Y221 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 180 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 180 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1T5Y MSE A 1 ? UNP Q9Y221 ? ? 'EXPRESSION TAG' -9 1 1 1T5Y GLY A 2 ? UNP Q9Y221 ? ? 'EXPRESSION TAG' -8 2 1 1T5Y HIS A 3 ? UNP Q9Y221 ? ? 'EXPRESSION TAG' -7 3 1 1T5Y HIS A 4 ? UNP Q9Y221 ? ? 'EXPRESSION TAG' -6 4 1 1T5Y HIS A 5 ? UNP Q9Y221 ? ? 'EXPRESSION TAG' -5 5 1 1T5Y HIS A 6 ? UNP Q9Y221 ? ? 'EXPRESSION TAG' -4 6 1 1T5Y HIS A 7 ? UNP Q9Y221 ? ? 'EXPRESSION TAG' -3 7 1 1T5Y HIS A 8 ? UNP Q9Y221 ? ? 'EXPRESSION TAG' -2 8 1 1T5Y SER A 9 ? UNP Q9Y221 ? ? 'EXPRESSION TAG' -1 9 1 1T5Y HIS A 10 ? UNP Q9Y221 ? ? 'EXPRESSION TAG' 0 10 1 1T5Y MSE A 11 ? UNP Q9Y221 MET 1 'MODIFIED RESIDUE' 1 11 1 1T5Y MSE A 22 ? UNP Q9Y221 MET 12 'MODIFIED RESIDUE' 12 12 1 1T5Y MSE A 62 ? UNP Q9Y221 MET 52 'MODIFIED RESIDUE' 52 13 1 1T5Y MSE A 146 ? UNP Q9Y221 MET 136 'MODIFIED RESIDUE' 136 14 1 1T5Y MSE A 169 ? UNP Q9Y221 MET 159 'MODIFIED RESIDUE' 159 15 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1T5Y _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 50 _exptl_crystal.description ? _exptl_crystal.density_Matthews 2.57 _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.8 _exptl_crystal_grow.pdbx_details '200 mM magnesium sulfate, 20% PEG, 100 mM sodium acetate, 10 mM DTT, pH 5.8, VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2004-04-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97895 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97895 # _reflns.entry_id 1T5Y _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 2.5 _reflns.number_obs 14942 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.142 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 5.9 _reflns.B_iso_Wilson_estimate 31.5 _reflns.pdbx_redundancy 7.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 99.5 _reflns_shell.Rmerge_I_obs 0.603 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1T5Y _refine.ls_number_reflns_obs 12603 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 293629.05 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.60 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 84.3 _refine.ls_R_factor_obs 0.213 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.213 _refine.ls_R_factor_R_free 0.294 _refine.ls_R_factor_R_free_error 0.012 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 613 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 33.4 _refine.aniso_B[1][1] 6.51 _refine.aniso_B[2][2] -0.01 _refine.aniso_B[3][3] -6.49 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.344829 _refine.solvent_model_param_bsol 23.7115 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1T5Y _refine_analyze.Luzzati_coordinate_error_obs 0.28 _refine_analyze.Luzzati_sigma_a_obs 0.25 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.41 _refine_analyze.Luzzati_sigma_a_free 0.43 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1351 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 49 _refine_hist.number_atoms_total 1400 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 19.60 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.5 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.86 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.51 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.57 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.49 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.67 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.50 _refine_ls_shell.d_res_low 2.66 _refine_ls_shell.number_reflns_R_work 1434 _refine_ls_shell.R_factor_R_work 0.256 _refine_ls_shell.percent_reflns_obs 61.3 _refine_ls_shell.R_factor_R_free 0.357 _refine_ls_shell.R_factor_R_free_error 0.037 _refine_ls_shell.percent_reflns_R_free 6.2 _refine_ls_shell.number_reflns_R_free 95 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1T5Y _struct.title 'Crystal Structure of Northeast Structural Genomics Consortium Target HR2118: A Human Homolog of Saccharomyces cerevisiae Nip7p' _struct.pdbx_descriptor 'SACCHAROMYCES CEREVISIAE Nip7p HOMOLOG' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1T5Y _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION, PSI, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 15 ? GLY A 31 ? THR A 5 GLY A 21 1 ? 17 HELX_P HELX_P2 2 ASN A 33 ? VAL A 38 ? ASN A 23 VAL A 28 1 ? 6 HELX_P HELX_P3 3 GLU A 59 ? LYS A 63 ? GLU A 49 LYS A 53 1 ? 5 HELX_P HELX_P4 4 GLY A 70 ? SER A 75 ? GLY A 60 SER A 65 1 ? 6 HELX_P HELX_P5 5 ALA A 95 ? ALA A 100 ? ALA A 85 ALA A 90 1 ? 6 HELX_P HELX_P6 6 PRO A 101 ? ALA A 103 ? PRO A 91 ALA A 93 5 ? 3 HELX_P HELX_P7 7 LYS A 110 ? TYR A 119 ? LYS A 100 TYR A 109 1 ? 10 HELX_P HELX_P8 8 SER A 159 ? VAL A 166 ? SER A 149 VAL A 156 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 11 C ? ? ? 1_555 A ARG 12 N ? ? A MSE 1 A ARG 2 1_555 ? ? ? ? ? ? ? 1.328 ? covale2 covale ? ? A VAL 21 C ? ? ? 1_555 A MSE 22 N ? ? A VAL 11 A MSE 12 1_555 ? ? ? ? ? ? ? 1.328 ? covale3 covale ? ? A MSE 22 C ? ? ? 1_555 A PHE 23 N ? ? A MSE 12 A PHE 13 1_555 ? ? ? ? ? ? ? 1.331 ? covale4 covale ? ? A ILE 61 C ? ? ? 1_555 A MSE 62 N ? ? A ILE 51 A MSE 52 1_555 ? ? ? ? ? ? ? 1.329 ? covale5 covale ? ? A MSE 62 C ? ? ? 1_555 A LYS 63 N ? ? A MSE 52 A LYS 53 1_555 ? ? ? ? ? ? ? 1.327 ? covale6 covale ? ? A SER 145 C ? ? ? 1_555 A MSE 146 N ? ? A SER 135 A MSE 136 1_555 ? ? ? ? ? ? ? 1.332 ? covale7 covale ? ? A MSE 146 C ? ? ? 1_555 A ALA 147 N ? ? A MSE 136 A ALA 137 1_555 ? ? ? ? ? ? ? 1.332 ? covale8 covale ? ? A PRO 168 C ? ? ? 1_555 A MSE 169 N ? ? A PRO 158 A MSE 159 1_555 ? ? ? ? ? ? ? 1.328 ? covale9 covale ? ? A MSE 169 C ? ? ? 1_555 A ALA 170 N ? ? A MSE 159 A ALA 160 1_555 ? ? ? ? ? ? ? 1.323 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 39 ? ARG A 40 ? ASP A 29 ARG A 30 A 2 GLY A 43 ? HIS A 50 ? GLY A 33 HIS A 40 A 3 ARG A 53 ? SER A 58 ? ARG A 43 SER A 48 A 4 THR A 78 ? PHE A 83 ? THR A 68 PHE A 73 A 5 PHE A 89 ? LEU A 91 ? PHE A 79 LEU A 81 B 1 VAL A 123 ? LEU A 124 ? VAL A 113 LEU A 114 B 2 ILE A 171 ? ASP A 178 ? ILE A 161 ASP A 168 B 3 PRO A 150 ? ALA A 156 ? PRO A 140 ALA A 146 B 4 GLY A 140 ? SER A 145 ? GLY A 130 SER A 135 B 5 LYS A 106 ? ILE A 109 ? LYS A 96 ILE A 99 B 6 LEU A 128 ? ILE A 131 ? LEU A 118 ILE A 121 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 40 ? N ARG A 30 O GLY A 43 ? O GLY A 33 A 2 3 N CYS A 46 ? N CYS A 36 O VAL A 57 ? O VAL A 47 A 3 4 N TYR A 56 ? N TYR A 46 O THR A 78 ? O THR A 68 A 4 5 N LYS A 82 ? N LYS A 72 O ARG A 90 ? O ARG A 80 B 1 2 N VAL A 123 ? N VAL A 113 O VAL A 173 ? O VAL A 163 B 2 3 O PHE A 174 ? O PHE A 164 N VAL A 155 ? N VAL A 145 B 3 4 O GLY A 154 ? O GLY A 144 N VAL A 141 ? N VAL A 131 B 4 5 O TYR A 144 ? O TYR A 134 N VAL A 107 ? N VAL A 97 B 5 6 N TRP A 108 ? N TRP A 98 O ARG A 130 ? O ARG A 120 # _database_PDB_matrix.entry_id 1T5Y _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1T5Y _atom_sites.fract_transf_matrix[1][1] 0.017232 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017232 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007536 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -9 ? ? ? A . n A 1 2 GLY 2 -8 ? ? ? A . n A 1 3 HIS 3 -7 ? ? ? A . n A 1 4 HIS 4 -6 ? ? ? A . n A 1 5 HIS 5 -5 ? ? ? A . n A 1 6 HIS 6 -4 ? ? ? A . n A 1 7 HIS 7 -3 ? ? ? A . n A 1 8 HIS 8 -2 ? ? ? A . n A 1 9 SER 9 -1 ? ? ? A . n A 1 10 HIS 10 0 ? ? ? A . n A 1 11 MSE 11 1 1 MSE MSE A . n A 1 12 ARG 12 2 2 ARG ARG A . n A 1 13 PRO 13 3 3 PRO PRO A . n A 1 14 LEU 14 4 4 LEU LEU A . n A 1 15 THR 15 5 5 THR THR A . n A 1 16 GLU 16 6 6 GLU GLU A . n A 1 17 GLU 17 7 7 GLU GLU A . n A 1 18 GLU 18 8 8 GLU GLU A . n A 1 19 THR 19 9 9 THR THR A . n A 1 20 ARG 20 10 10 ARG ARG A . n A 1 21 VAL 21 11 11 VAL VAL A . n A 1 22 MSE 22 12 12 MSE MSE A . n A 1 23 PHE 23 13 13 PHE PHE A . n A 1 24 GLU 24 14 14 GLU GLU A . n A 1 25 LYS 25 15 15 LYS LYS A . n A 1 26 ILE 26 16 16 ILE ILE A . n A 1 27 ALA 27 17 17 ALA ALA A . n A 1 28 LYS 28 18 18 LYS LYS A . n A 1 29 TYR 29 19 19 TYR TYR A . n A 1 30 ILE 30 20 20 ILE ILE A . n A 1 31 GLY 31 21 21 GLY GLY A . n A 1 32 GLU 32 22 22 GLU GLU A . n A 1 33 ASN 33 23 23 ASN ASN A . n A 1 34 LEU 34 24 24 LEU LEU A . n A 1 35 GLN 35 25 25 GLN GLN A . n A 1 36 LEU 36 26 26 LEU LEU A . n A 1 37 LEU 37 27 27 LEU LEU A . n A 1 38 VAL 38 28 28 VAL VAL A . n A 1 39 ASP 39 29 29 ASP ASP A . n A 1 40 ARG 40 30 30 ARG ARG A . n A 1 41 PRO 41 31 31 PRO PRO A . n A 1 42 ASP 42 32 32 ASP ASP A . n A 1 43 GLY 43 33 33 GLY GLY A . n A 1 44 THR 44 34 34 THR THR A . n A 1 45 TYR 45 35 35 TYR TYR A . n A 1 46 CYS 46 36 36 CYS CYS A . n A 1 47 PHE 47 37 37 PHE PHE A . n A 1 48 ARG 48 38 38 ARG ARG A . n A 1 49 LEU 49 39 39 LEU LEU A . n A 1 50 HIS 50 40 40 HIS HIS A . n A 1 51 ASN 51 41 41 ASN ASN A . n A 1 52 ASP 52 42 42 ASP ASP A . n A 1 53 ARG 53 43 43 ARG ARG A . n A 1 54 VAL 54 44 44 VAL VAL A . n A 1 55 TYR 55 45 45 TYR TYR A . n A 1 56 TYR 56 46 46 TYR TYR A . n A 1 57 VAL 57 47 47 VAL VAL A . n A 1 58 SER 58 48 48 SER SER A . n A 1 59 GLU 59 49 49 GLU GLU A . n A 1 60 LYS 60 50 50 LYS LYS A . n A 1 61 ILE 61 51 51 ILE ILE A . n A 1 62 MSE 62 52 52 MSE MSE A . n A 1 63 LYS 63 53 53 LYS LYS A . n A 1 64 LEU 64 54 54 LEU LEU A . n A 1 65 ALA 65 55 55 ALA ALA A . n A 1 66 ALA 66 56 56 ALA ALA A . n A 1 67 ASN 67 57 57 ASN ASN A . n A 1 68 ILE 68 58 58 ILE ILE A . n A 1 69 SER 69 59 59 SER SER A . n A 1 70 GLY 70 60 60 GLY GLY A . n A 1 71 ASP 71 61 61 ASP ASP A . n A 1 72 LYS 72 62 62 LYS LYS A . n A 1 73 LEU 73 63 63 LEU LEU A . n A 1 74 VAL 74 64 64 VAL VAL A . n A 1 75 SER 75 65 65 SER SER A . n A 1 76 LEU 76 66 66 LEU LEU A . n A 1 77 GLY 77 67 67 GLY GLY A . n A 1 78 THR 78 68 68 THR THR A . n A 1 79 CYS 79 69 69 CYS CYS A . n A 1 80 PHE 80 70 70 PHE PHE A . n A 1 81 GLY 81 71 71 GLY GLY A . n A 1 82 LYS 82 72 72 LYS LYS A . n A 1 83 PHE 83 73 73 PHE PHE A . n A 1 84 THR 84 74 74 THR THR A . n A 1 85 LYS 85 75 75 LYS LYS A . n A 1 86 THR 86 76 76 THR THR A . n A 1 87 HIS 87 77 77 HIS HIS A . n A 1 88 LYS 88 78 78 LYS LYS A . n A 1 89 PHE 89 79 79 PHE PHE A . n A 1 90 ARG 90 80 80 ARG ARG A . n A 1 91 LEU 91 81 81 LEU LEU A . n A 1 92 HIS 92 82 82 HIS HIS A . n A 1 93 VAL 93 83 83 VAL VAL A . n A 1 94 THR 94 84 84 THR THR A . n A 1 95 ALA 95 85 85 ALA ALA A . n A 1 96 LEU 96 86 86 LEU LEU A . n A 1 97 ASP 97 87 87 ASP ASP A . n A 1 98 TYR 98 88 88 TYR TYR A . n A 1 99 LEU 99 89 89 LEU LEU A . n A 1 100 ALA 100 90 90 ALA ALA A . n A 1 101 PRO 101 91 91 PRO PRO A . n A 1 102 TYR 102 92 92 TYR TYR A . n A 1 103 ALA 103 93 93 ALA ALA A . n A 1 104 LYS 104 94 94 LYS LYS A . n A 1 105 TYR 105 95 95 TYR TYR A . n A 1 106 LYS 106 96 96 LYS LYS A . n A 1 107 VAL 107 97 97 VAL VAL A . n A 1 108 TRP 108 98 98 TRP TRP A . n A 1 109 ILE 109 99 99 ILE ILE A . n A 1 110 LYS 110 100 100 LYS LYS A . n A 1 111 PRO 111 101 101 PRO PRO A . n A 1 112 GLY 112 102 102 GLY GLY A . n A 1 113 ALA 113 103 103 ALA ALA A . n A 1 114 GLU 114 104 104 GLU GLU A . n A 1 115 GLN 115 105 105 GLN GLN A . n A 1 116 SER 116 106 106 SER SER A . n A 1 117 PHE 117 107 107 PHE PHE A . n A 1 118 LEU 118 108 108 LEU LEU A . n A 1 119 TYR 119 109 109 TYR TYR A . n A 1 120 GLY 120 110 110 GLY GLY A . n A 1 121 ASN 121 111 111 ASN ASN A . n A 1 122 HIS 122 112 112 HIS HIS A . n A 1 123 VAL 123 113 113 VAL VAL A . n A 1 124 LEU 124 114 114 LEU LEU A . n A 1 125 LYS 125 115 115 LYS LYS A . n A 1 126 SER 126 116 116 SER SER A . n A 1 127 GLY 127 117 117 GLY GLY A . n A 1 128 LEU 128 118 118 LEU LEU A . n A 1 129 GLY 129 119 119 GLY GLY A . n A 1 130 ARG 130 120 120 ARG ARG A . n A 1 131 ILE 131 121 121 ILE ILE A . n A 1 132 THR 132 122 122 THR THR A . n A 1 133 GLU 133 123 123 GLU GLU A . n A 1 134 ASN 134 124 124 ASN ASN A . n A 1 135 THR 135 125 125 THR THR A . n A 1 136 SER 136 126 126 SER SER A . n A 1 137 GLN 137 127 127 GLN GLN A . n A 1 138 TYR 138 128 128 TYR TYR A . n A 1 139 GLN 139 129 129 GLN GLN A . n A 1 140 GLY 140 130 130 GLY GLY A . n A 1 141 VAL 141 131 131 VAL VAL A . n A 1 142 VAL 142 132 132 VAL VAL A . n A 1 143 VAL 143 133 133 VAL VAL A . n A 1 144 TYR 144 134 134 TYR TYR A . n A 1 145 SER 145 135 135 SER SER A . n A 1 146 MSE 146 136 136 MSE MSE A . n A 1 147 ALA 147 137 137 ALA ALA A . n A 1 148 ASP 148 138 138 ASP ASP A . n A 1 149 ILE 149 139 139 ILE ILE A . n A 1 150 PRO 150 140 140 PRO PRO A . n A 1 151 LEU 151 141 141 LEU LEU A . n A 1 152 GLY 152 142 142 GLY GLY A . n A 1 153 PHE 153 143 143 PHE PHE A . n A 1 154 GLY 154 144 144 GLY GLY A . n A 1 155 VAL 155 145 145 VAL VAL A . n A 1 156 ALA 156 146 146 ALA ALA A . n A 1 157 ALA 157 147 147 ALA ALA A . n A 1 158 LYS 158 148 148 LYS LYS A . n A 1 159 SER 159 149 149 SER SER A . n A 1 160 THR 160 150 150 THR THR A . n A 1 161 GLN 161 151 151 GLN GLN A . n A 1 162 ASP 162 152 152 ASP ASP A . n A 1 163 CYS 163 153 153 CYS CYS A . n A 1 164 ARG 164 154 154 ARG ARG A . n A 1 165 LYS 165 155 155 LYS LYS A . n A 1 166 VAL 166 156 156 VAL VAL A . n A 1 167 ASP 167 157 157 ASP ASP A . n A 1 168 PRO 168 158 158 PRO PRO A . n A 1 169 MSE 169 159 159 MSE MSE A . n A 1 170 ALA 170 160 160 ALA ALA A . n A 1 171 ILE 171 161 161 ILE ILE A . n A 1 172 VAL 172 162 162 VAL VAL A . n A 1 173 VAL 173 163 163 VAL VAL A . n A 1 174 PHE 174 164 164 PHE PHE A . n A 1 175 HIS 175 165 165 HIS HIS A . n A 1 176 GLN 176 166 166 GLN GLN A . n A 1 177 ALA 177 167 167 ALA ALA A . n A 1 178 ASP 178 168 168 ASP ASP A . n A 1 179 ILE 179 169 169 ILE ILE A . n A 1 180 GLY 180 170 170 GLY GLY A . n A 1 181 GLU 181 171 ? ? ? A . n A 1 182 TYR 182 172 ? ? ? A . n A 1 183 VAL 183 173 ? ? ? A . n A 1 184 ARG 184 174 ? ? ? A . n A 1 185 HIS 185 175 ? ? ? A . n A 1 186 GLU 186 176 ? ? ? A . n A 1 187 GLU 187 177 ? ? ? A . n A 1 188 THR 188 178 ? ? ? A . n A 1 189 LEU 189 179 ? ? ? A . n A 1 190 THR 190 180 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 11 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 22 A MSE 12 ? MET SELENOMETHIONINE 3 A MSE 62 A MSE 52 ? MET SELENOMETHIONINE 4 A MSE 146 A MSE 136 ? MET SELENOMETHIONINE 5 A MSE 169 A MSE 159 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-06-01 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 RESOLVE phasing . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 2 ? ? 178.51 151.80 2 1 HIS A 40 ? ? -163.51 109.20 3 1 LYS A 53 ? ? -65.31 2.13 4 1 ALA A 56 ? ? 76.14 -5.35 5 1 SER A 59 ? ? -63.68 8.32 6 1 PRO A 158 ? ? -38.41 -29.47 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -9 ? A MSE 1 2 1 Y 1 A GLY -8 ? A GLY 2 3 1 Y 1 A HIS -7 ? A HIS 3 4 1 Y 1 A HIS -6 ? A HIS 4 5 1 Y 1 A HIS -5 ? A HIS 5 6 1 Y 1 A HIS -4 ? A HIS 6 7 1 Y 1 A HIS -3 ? A HIS 7 8 1 Y 1 A HIS -2 ? A HIS 8 9 1 Y 1 A SER -1 ? A SER 9 10 1 Y 1 A HIS 0 ? A HIS 10 11 1 Y 1 A GLU 171 ? A GLU 181 12 1 Y 1 A TYR 172 ? A TYR 182 13 1 Y 1 A VAL 173 ? A VAL 183 14 1 Y 1 A ARG 174 ? A ARG 184 15 1 Y 1 A HIS 175 ? A HIS 185 16 1 Y 1 A GLU 176 ? A GLU 186 17 1 Y 1 A GLU 177 ? A GLU 187 18 1 Y 1 A THR 178 ? A THR 188 19 1 Y 1 A LEU 179 ? A LEU 189 20 1 Y 1 A THR 180 ? A THR 190 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 181 1 HOH HOH A . B 2 HOH 2 182 2 HOH HOH A . B 2 HOH 3 183 3 HOH HOH A . B 2 HOH 4 184 4 HOH HOH A . B 2 HOH 5 185 5 HOH HOH A . B 2 HOH 6 186 6 HOH HOH A . B 2 HOH 7 187 7 HOH HOH A . B 2 HOH 8 188 8 HOH HOH A . B 2 HOH 9 189 9 HOH HOH A . B 2 HOH 10 190 10 HOH HOH A . B 2 HOH 11 191 11 HOH HOH A . B 2 HOH 12 192 12 HOH HOH A . B 2 HOH 13 193 13 HOH HOH A . B 2 HOH 14 194 15 HOH HOH A . B 2 HOH 15 195 16 HOH HOH A . B 2 HOH 16 196 17 HOH HOH A . B 2 HOH 17 197 18 HOH HOH A . B 2 HOH 18 198 19 HOH HOH A . B 2 HOH 19 199 21 HOH HOH A . B 2 HOH 20 200 22 HOH HOH A . B 2 HOH 21 201 23 HOH HOH A . B 2 HOH 22 202 24 HOH HOH A . B 2 HOH 23 203 25 HOH HOH A . B 2 HOH 24 204 26 HOH HOH A . B 2 HOH 25 205 27 HOH HOH A . B 2 HOH 26 206 28 HOH HOH A . B 2 HOH 27 207 29 HOH HOH A . B 2 HOH 28 208 30 HOH HOH A . B 2 HOH 29 209 31 HOH HOH A . B 2 HOH 30 210 32 HOH HOH A . B 2 HOH 31 211 33 HOH HOH A . B 2 HOH 32 212 34 HOH HOH A . B 2 HOH 33 213 35 HOH HOH A . B 2 HOH 34 214 36 HOH HOH A . B 2 HOH 35 215 37 HOH HOH A . B 2 HOH 36 216 38 HOH HOH A . B 2 HOH 37 217 39 HOH HOH A . B 2 HOH 38 218 40 HOH HOH A . B 2 HOH 39 219 41 HOH HOH A . B 2 HOH 40 220 42 HOH HOH A . B 2 HOH 41 221 43 HOH HOH A . B 2 HOH 42 222 44 HOH HOH A . B 2 HOH 43 223 46 HOH HOH A . B 2 HOH 44 224 47 HOH HOH A . B 2 HOH 45 225 48 HOH HOH A . B 2 HOH 46 226 49 HOH HOH A . B 2 HOH 47 227 50 HOH HOH A . B 2 HOH 48 228 51 HOH HOH A . B 2 HOH 49 229 52 HOH HOH A . #