HEADER CALCIUM-BINDING PROTEIN 15-APR-97 1TBO TITLE NMR STRUCTURE OF A PROTEIN KINASE C-G PHORBOL-BINDING DOMAIN, 30 TITLE 2 STRUCTURES COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN KINASE C, GAMMA TYPE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CYS2 DOMAIN; COMPND 5 SYNONYM: RAT BRAIN PKC-G; COMPND 6 EC: 2.7.1.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS RATTUS; SOURCE 3 ORGANISM_COMMON: BLACK RAT; SOURCE 4 ORGANISM_TAXID: 10117; SOURCE 5 ORGAN: BRAIN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS CALCIUM-BINDING PROTEIN, PROTEIN KINASE C, PKC, TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 30 AUTHOR R.X.XU,T.PAWELCZYK,T.XIA,S.C.BROWN REVDAT 3 02-MAR-22 1TBO 1 REMARK LINK REVDAT 2 24-FEB-09 1TBO 1 VERSN REVDAT 1 29-APR-98 1TBO 0 JRNL AUTH R.X.XU,T.PAWELCZYK,T.H.XIA,S.C.BROWN JRNL TITL NMR STRUCTURE OF A PROTEIN KINASE C-GAMMA PHORBOL-BINDING JRNL TITL 2 DOMAIN AND STUDY OF PROTEIN-LIPID MICELLE INTERACTIONS. JRNL REF BIOCHEMISTRY V. 36 10709 1997 JRNL REFN ISSN 0006-2960 JRNL PMID 9271501 JRNL DOI 10.1021/BI970833A REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH G.ZHANG,M.G.KAZANIETZ,P.M.BLUMBERG,J.H.HURLEY REMARK 1 TITL CRYSTAL STRUCTURE OF THE CYS2 ACTIVATOR-BINDING DOMAIN OF REMARK 1 TITL 2 PROTEIN KINASE C DELTA IN COMPLEX WITH PHORBOL ESTER REMARK 1 REF CELL(CAMBRIDGE,MASS.) V. 81 917 1995 REMARK 1 REFN ISSN 0092-8674 REMARK 1 REFERENCE 2 REMARK 1 AUTH S.ICHIKAWA,H.HATANAKA,Y.TAKEUCHI,S.OHNO,F.INAGAKI REMARK 1 TITL SOLUTION STRUCTURE OF CYSTEINE-RICH DOMAIN OF PROTEIN KINASE REMARK 1 TITL 2 C ALPHA REMARK 1 REF J.BIOCHEM.(TOKYO) V. 117 566 1995 REMARK 1 REFN ISSN 0021-924X REMARK 1 REFERENCE 3 REMARK 1 AUTH U.HOMMEL,M.ZURINI,M.LUYTEN REMARK 1 TITL SOLUTION STRUCTURE OF A CYSTEINE RICH DOMAIN OF RAT PROTEIN REMARK 1 TITL 2 KINASE C REMARK 1 REF NAT.STRUCT.BIOL. V. 1 383 1994 REMARK 1 REFN ISSN 1072-8368 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER (X-PLOR), BRUNGER (X-PLOR) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1TBO COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000176599. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : UNITYPLUS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : DG-SA REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 30 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-30 REMARK 465 RES C SSSEQI REMARK 465 GLY A 92 REMARK 465 PRO A 93 REMARK 465 GLY A 160 REMARK 465 ARG A 161 REMARK 465 LEU A 162 REMARK 465 GLN A 163 REMARK 465 LEU A 164 REMARK 465 GLU A 165 REMARK 465 ILE A 166 REMARK 465 ARG A 167 REMARK 465 ALA A 168 REMARK 465 PRO A 169 REMARK 465 THR A 170 REMARK 465 SER A 171 REMARK 465 ASP A 172 REMARK 465 GLU A 173 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 95 -41.11 -156.37 REMARK 500 1 ASN A 100 -136.16 -128.67 REMARK 500 1 HIS A 102 154.16 -44.81 REMARK 500 1 LYS A 103 47.95 -94.15 REMARK 500 1 SER A 110 -59.84 161.81 REMARK 500 1 LEU A 121 151.92 -43.54 REMARK 500 1 LEU A 125 -38.34 -138.39 REMARK 500 1 GLN A 128 -72.51 -138.26 REMARK 500 1 SER A 133 44.25 -83.85 REMARK 500 1 CYS A 134 -40.56 -150.11 REMARK 500 1 GLU A 136 81.76 76.13 REMARK 500 1 SER A 149 89.95 61.34 REMARK 500 1 ASP A 154 -169.95 -114.88 REMARK 500 2 PRO A 98 -159.13 -77.35 REMARK 500 2 ARG A 99 -140.63 -81.09 REMARK 500 2 LYS A 103 46.34 -90.56 REMARK 500 2 PHE A 104 148.55 -39.80 REMARK 500 2 LEU A 122 90.21 -68.72 REMARK 500 2 TYR A 123 -172.57 -53.17 REMARK 500 2 GLN A 128 -75.46 77.99 REMARK 500 2 SER A 133 38.52 -84.40 REMARK 500 2 CYS A 134 -38.45 -150.49 REMARK 500 2 GLU A 136 74.96 62.48 REMARK 500 2 SER A 149 93.94 64.68 REMARK 500 3 LYS A 103 43.02 -89.96 REMARK 500 3 SER A 110 -25.67 160.83 REMARK 500 3 LEU A 122 35.93 -86.57 REMARK 500 3 HIS A 127 107.59 -50.10 REMARK 500 3 GLN A 128 -87.52 63.77 REMARK 500 3 SER A 133 45.11 -84.51 REMARK 500 3 CYS A 134 -39.26 -146.84 REMARK 500 3 GLU A 136 73.03 70.66 REMARK 500 3 SER A 149 75.65 75.96 REMARK 500 3 HIS A 155 50.00 -165.15 REMARK 500 3 THR A 156 95.03 47.18 REMARK 500 4 THR A 95 43.86 -98.99 REMARK 500 4 ARG A 99 31.87 -142.24 REMARK 500 4 LYS A 103 49.07 -89.67 REMARK 500 4 PHE A 104 137.46 -39.57 REMARK 500 4 TYR A 123 177.08 -48.81 REMARK 500 4 HIS A 127 92.45 -50.07 REMARK 500 4 GLN A 128 -91.37 62.39 REMARK 500 4 SER A 133 45.70 -84.53 REMARK 500 4 CYS A 134 -39.06 -148.83 REMARK 500 4 GLU A 136 76.49 62.04 REMARK 500 4 PRO A 148 40.38 -80.54 REMARK 500 4 CYS A 151 62.39 -103.83 REMARK 500 5 ASP A 96 -175.40 -58.61 REMARK 500 5 ASP A 97 66.44 -158.63 REMARK 500 5 ARG A 99 134.35 -177.47 REMARK 500 REMARK 500 THIS ENTRY HAS 428 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 99 0.18 SIDE CHAIN REMARK 500 1 ARG A 105 0.10 SIDE CHAIN REMARK 500 1 ARG A 141 0.32 SIDE CHAIN REMARK 500 1 ARG A 142 0.30 SIDE CHAIN REMARK 500 1 ARG A 145 0.27 SIDE CHAIN REMARK 500 1 ARG A 158 0.32 SIDE CHAIN REMARK 500 1 ARG A 159 0.31 SIDE CHAIN REMARK 500 2 ARG A 99 0.31 SIDE CHAIN REMARK 500 2 ARG A 105 0.32 SIDE CHAIN REMARK 500 2 ARG A 141 0.26 SIDE CHAIN REMARK 500 2 ARG A 142 0.15 SIDE CHAIN REMARK 500 2 ARG A 145 0.32 SIDE CHAIN REMARK 500 2 ARG A 158 0.31 SIDE CHAIN REMARK 500 2 ARG A 159 0.27 SIDE CHAIN REMARK 500 3 ARG A 99 0.25 SIDE CHAIN REMARK 500 3 ARG A 105 0.22 SIDE CHAIN REMARK 500 3 ARG A 141 0.09 SIDE CHAIN REMARK 500 3 ARG A 142 0.32 SIDE CHAIN REMARK 500 3 ARG A 145 0.30 SIDE CHAIN REMARK 500 3 ARG A 158 0.26 SIDE CHAIN REMARK 500 3 ARG A 159 0.30 SIDE CHAIN REMARK 500 4 ARG A 99 0.20 SIDE CHAIN REMARK 500 4 ARG A 105 0.31 SIDE CHAIN REMARK 500 4 ARG A 141 0.24 SIDE CHAIN REMARK 500 4 ARG A 142 0.30 SIDE CHAIN REMARK 500 4 ARG A 145 0.22 SIDE CHAIN REMARK 500 4 ARG A 158 0.12 SIDE CHAIN REMARK 500 4 ARG A 159 0.23 SIDE CHAIN REMARK 500 5 ARG A 99 0.09 SIDE CHAIN REMARK 500 5 ARG A 105 0.25 SIDE CHAIN REMARK 500 5 ARG A 141 0.09 SIDE CHAIN REMARK 500 5 ARG A 142 0.17 SIDE CHAIN REMARK 500 5 ARG A 145 0.28 SIDE CHAIN REMARK 500 5 ARG A 158 0.31 SIDE CHAIN REMARK 500 5 ARG A 159 0.23 SIDE CHAIN REMARK 500 6 ARG A 99 0.20 SIDE CHAIN REMARK 500 6 ARG A 105 0.12 SIDE CHAIN REMARK 500 6 ARG A 141 0.31 SIDE CHAIN REMARK 500 6 ARG A 142 0.30 SIDE CHAIN REMARK 500 6 ARG A 145 0.27 SIDE CHAIN REMARK 500 6 ARG A 158 0.22 SIDE CHAIN REMARK 500 6 ARG A 159 0.28 SIDE CHAIN REMARK 500 7 ARG A 99 0.27 SIDE CHAIN REMARK 500 7 ARG A 105 0.28 SIDE CHAIN REMARK 500 7 ARG A 141 0.31 SIDE CHAIN REMARK 500 7 ARG A 142 0.22 SIDE CHAIN REMARK 500 7 ARG A 145 0.30 SIDE CHAIN REMARK 500 7 ARG A 158 0.20 SIDE CHAIN REMARK 500 7 ARG A 159 0.32 SIDE CHAIN REMARK 500 8 ARG A 99 0.30 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 204 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 1 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 102 ND1 REMARK 620 2 CYS A 132 SG 123.1 REMARK 620 3 CYS A 135 SG 127.8 106.0 REMARK 620 4 CYS A 151 SG 90.3 89.0 108.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 2 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 115 SG REMARK 620 2 CYS A 118 SG 90.4 REMARK 620 3 HIS A 140 ND1 97.5 87.4 REMARK 620 4 CYS A 143 SG 138.9 118.7 111.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1TBN RELATED DB: PDB DBREF 1TBO A 92 173 UNP P05697 KPCG_MOUSE 91 172 SEQRES 1 A 82 GLY PRO GLN THR ASP ASP PRO ARG ASN LYS HIS LYS PHE SEQRES 2 A 82 ARG LEU HIS SER TYR SER SER PRO THR PHE CYS ASP HIS SEQRES 3 A 82 CYS GLY SER LEU LEU TYR GLY LEU VAL HIS GLN GLY MET SEQRES 4 A 82 LYS CYS SER CYS CYS GLU MET ASN VAL HIS ARG ARG CYS SEQRES 5 A 82 VAL ARG SER VAL PRO SER LEU CYS GLY VAL ASP HIS THR SEQRES 6 A 82 GLU ARG ARG GLY ARG LEU GLN LEU GLU ILE ARG ALA PRO SEQRES 7 A 82 THR SER ASP GLU HET ZN A 1 1 HET ZN A 2 1 HETNAM ZN ZINC ION FORMUL 2 ZN 2(ZN 2+) SHEET 1 A 2 PHE A 104 LEU A 106 0 SHEET 2 A 2 MET A 130 CYS A 132 -1 N LYS A 131 O ARG A 105 LINK ZN ZN A 1 ND1 HIS A 102 1555 1555 1.78 LINK ZN ZN A 1 SG CYS A 132 1555 1555 2.47 LINK ZN ZN A 1 SG CYS A 135 1555 1555 2.11 LINK ZN ZN A 1 SG CYS A 151 1555 1555 2.74 LINK ZN ZN A 2 SG CYS A 115 1555 1555 2.11 LINK ZN ZN A 2 SG CYS A 118 1555 1555 2.41 LINK ZN ZN A 2 ND1 HIS A 140 1555 1555 1.96 LINK ZN ZN A 2 SG CYS A 143 1555 1555 2.42 SITE 1 AC1 4 HIS A 102 CYS A 132 CYS A 135 CYS A 151 SITE 1 AC2 4 CYS A 115 CYS A 118 HIS A 140 CYS A 143 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1