HEADER TRANSFERASE 19-NOV-96 1TDT TITLE THREE-DIMENSIONAL STRUCTURE OF TETRAHYDRODIPICOLINATE-N- TITLE 2 SUCCINYLTRANSFERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TETRAHYDRODIPICOLINATE-N-SUCCINYLTRANSFERASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: THDP-SUCCINYLTRANSFERASE, DAPD; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM BOVIS; SOURCE 3 ORGANISM_TAXID: 1765; SOURCE 4 CELL_LINE: BL21; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS TRANSFERASE, SUCCINYLTRANSFERASE, LYSINE METABOLISM, HEXAPEPTIDE KEYWDS 2 TRANSFERASE, CELL WALL BIOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR T.W.BEAMAN,D.W.BINDER,J.S.BLANCHARD,S.L.RODERICK REVDAT 3 14-FEB-24 1TDT 1 REMARK REVDAT 2 24-FEB-09 1TDT 1 VERSN REVDAT 1 05-JUN-97 1TDT 0 JRNL AUTH T.W.BEAMAN,D.A.BINDER,J.S.BLANCHARD,S.L.RODERICK JRNL TITL THREE-DIMENSIONAL STRUCTURE OF TETRAHYDRODIPICOLINATE JRNL TITL 2 N-SUCCINYLTRANSFERASE. JRNL REF BIOCHEMISTRY V. 36 489 1997 JRNL REFN ISSN 0006-2960 JRNL PMID 9012664 JRNL DOI 10.1021/BI962522Q REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.A.BINDER,J.S.BLANCHARD,S.L.RODERICK REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY CRYSTALLOGRAPHIC ANALYSIS OF REMARK 1 TITL 2 TETRAHYDRODIPICOLINATE-N-SUCCINYLTRANSFERASE REMARK 1 REF PROTEINS V. 26 115 1996 REMARK 1 REFN ISSN 0887-3585 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.0 REMARK 3 NUMBER OF REFLECTIONS : 38447 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1921 REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.1700 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.00 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 1921 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 38447 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5780 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 215 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.009 ; 0.800 ; 5882 REMARK 3 BOND ANGLES (DEGREES) : 1.970 ; 1.300 ; 7976 REMARK 3 TORSION ANGLES (DEGREES) : 24.100; 0.000 ; 3515 REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : 0.005 ; 2.000 ; 150 REMARK 3 GENERAL PLANES (A) : 0.010 ; 5.000 ; 871 REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : 3.930 ; 3.000 ; 11764 REMARK 3 NON-BONDED CONTACTS (A) : 0.020 ; 10.000; 26 REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : 0.68 REMARK 3 BSOL : 187.3 REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : PROTGEO.DAT REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : BCORREL.DAT (WEIGHTS GIVEN REMARK 3 ABOVE) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1TDT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000176635. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 1996 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 3 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH2R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE(002) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : SIEMENS-NICOLET X100 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38447 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.0 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR - 2 HEAVY ATOM REMARK 200 DERIVATIVES REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14-19 % (W/V) POLYETHYLENEGLYCOL 4000 REMARK 280 200 MM AMMONIUM SULFATE 6-12 % 2-PROPANOL 100 MM HEPES, PH 7.5, REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 53.95000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 257 REMARK 465 ALA A 258 REMARK 465 LYS A 259 REMARK 465 MET B 1 REMARK 465 ASP B 257 REMARK 465 ALA B 258 REMARK 465 LYS B 259 REMARK 465 MET C 1 REMARK 465 GLN C 2 REMARK 465 GLN C 3 REMARK 465 ASP C 257 REMARK 465 ALA C 258 REMARK 465 LYS C 259 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 GLN A 2 CG CD OE1 NE2 REMARK 470 GLN A 3 CG CD OE1 NE2 REMARK 470 LYS A 73 CG CD CE NZ REMARK 470 LYS A 100 CG CD CE NZ REMARK 470 ARG A 119 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 241 CG CD CE NZ REMARK 470 LYS A 254 CG CD CE NZ REMARK 470 GLN B 2 CG CD OE1 NE2 REMARK 470 GLN B 3 CG CD OE1 NE2 REMARK 470 LYS B 73 CG CD CE NZ REMARK 470 LYS B 241 CG CD CE NZ REMARK 470 LYS B 254 CG CD CE NZ REMARK 470 LYS C 73 CG CD CE NZ REMARK 470 LYS C 100 CG CD CE NZ REMARK 470 LYS C 241 CG CD CE NZ REMARK 470 LYS C 254 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 79 CD GLU A 79 OE2 0.070 REMARK 500 GLU A 189 CD GLU A 189 OE2 0.068 REMARK 500 GLU B 13 CD GLU B 13 OE2 0.073 REMARK 500 GLU B 79 CD GLU B 79 OE2 0.069 REMARK 500 GLU B 101 CD GLU B 101 OE2 0.066 REMARK 500 GLU B 197 CD GLU B 197 OE2 0.066 REMARK 500 GLU B 221 CD GLU B 221 OE2 0.069 REMARK 500 GLU C 29 CD GLU C 29 OE2 0.075 REMARK 500 GLU C 79 CD GLU C 79 OE2 0.074 REMARK 500 GLU C 189 CD GLU C 189 OE2 0.069 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 24 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 24 CB - CG - OD2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ARG A 44 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ASP A 50 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP A 71 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 71 CB - CG - OD2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ASP A 84 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 84 CB - CG - OD2 ANGL. DEV. = -6.3 DEGREES REMARK 500 ASP A 92 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP A 94 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 94 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG A 104 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ASP A 135 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP A 135 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP A 180 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP A 180 CB - CG - OD2 ANGL. DEV. = -7.4 DEGREES REMARK 500 GLU A 221 CB - CA - C ANGL. DEV. = -13.7 DEGREES REMARK 500 ASP A 242 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 242 CB - CG - OD2 ANGL. DEV. = -6.5 DEGREES REMARK 500 ASP B 17 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ASP B 24 CB - CG - OD2 ANGL. DEV. = -6.2 DEGREES REMARK 500 ARG B 44 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ASP B 71 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP B 71 CB - CG - OD2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ASP B 84 CB - CG - OD2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ASP B 92 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ASP B 94 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG B 104 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG B 104 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ASP B 135 CB - CG - OD1 ANGL. DEV. = 7.0 DEGREES REMARK 500 ASP B 135 CB - CG - OD2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ASP B 180 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP B 180 CB - CG - OD2 ANGL. DEV. = -6.5 DEGREES REMARK 500 ASP B 216 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ASP B 242 CB - CG - OD2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ASP C 17 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ASP C 39 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG C 44 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ASP C 50 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ASP C 71 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP C 71 CB - CG - OD2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ASP C 92 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP C 92 CB - CG - OD2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ASP C 94 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG C 104 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG C 104 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ASP C 135 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP C 141 CB - CG - OD2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ASP C 216 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP C 216 CB - CG - OD2 ANGL. DEV. = -6.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 108 48.41 -102.18 REMARK 500 LEU A 168 -71.23 -100.96 REMARK 500 GLU A 198 137.44 -38.57 REMARK 500 SER B 126 -177.63 -172.87 REMARK 500 GLU B 198 137.58 -38.46 REMARK 500 LYS B 254 146.37 -177.64 REMARK 500 ARG C 15 -38.97 -38.90 REMARK 500 PRO C 108 40.65 -106.79 REMARK 500 LEU C 168 -62.41 -92.00 REMARK 500 GLU C 198 140.52 -39.15 REMARK 500 SER C 203 -165.90 -77.16 REMARK 500 REMARK 500 REMARK: NULL DBREF 1TDT A 1 259 UNP P56220 DAPD_MYCBO 1 259 DBREF 1TDT B 1 259 UNP P56220 DAPD_MYCBO 1 259 DBREF 1TDT C 1 259 UNP P56220 DAPD_MYCBO 1 259 SEQRES 1 A 259 MET GLN GLN LEU GLN ASN VAL ILE GLU SER ALA PHE GLU SEQRES 2 A 259 ARG ARG ALA ASP ILE THR PRO ALA ASN VAL ASP THR VAL SEQRES 3 A 259 THR ARG GLU ALA VAL ASN GLN VAL ILE GLY LEU LEU ASP SEQRES 4 A 259 SER GLY ALA LEU ARG VAL ALA GLU LYS ILE ASP GLY GLN SEQRES 5 A 259 TRP VAL THR HIS GLN TRP LEU LYS LYS ALA VAL LEU LEU SEQRES 6 A 259 SER PHE ARG ILE ASN ASP ASN LYS VAL MET ASP GLY ALA SEQRES 7 A 259 GLU THR ARG TYR TYR ASP LYS VAL PRO MET LYS PHE ALA SEQRES 8 A 259 ASP TYR ASP GLU ALA ARG PHE GLN LYS GLU GLY PHE ARG SEQRES 9 A 259 VAL VAL PRO PRO ALA THR VAL ARG GLN GLY ALA PHE ILE SEQRES 10 A 259 ALA ARG ASN THR VAL LEU MET PRO SER TYR VAL ASN ILE SEQRES 11 A 259 GLY ALA TYR VAL ASP GLU GLY THR MET VAL ASP THR TRP SEQRES 12 A 259 ALA THR VAL GLY SER CYS ALA GLN ILE GLY LYS ASN VAL SEQRES 13 A 259 HIS LEU SER GLY GLY VAL GLY ILE GLY GLY VAL LEU GLU SEQRES 14 A 259 PRO LEU GLN ALA ASN PRO THR ILE ILE GLU ASP ASN CYS SEQRES 15 A 259 PHE ILE GLY ALA ARG SER GLU VAL VAL GLU GLY VAL ILE SEQRES 16 A 259 VAL GLU GLU GLY SER VAL ILE SER MET GLY VAL TYR LEU SEQRES 17 A 259 GLY GLN SER THR ARG ILE TYR ASP ARG GLU THR GLY GLU SEQRES 18 A 259 ILE HIS TYR GLY ARG VAL PRO ALA GLY SER VAL VAL VAL SEQRES 19 A 259 SER GLY ASN LEU PRO SER LYS ASP GLY SER TYR SER LEU SEQRES 20 A 259 TYR CYS ALA VAL ILE VAL LYS LYS VAL ASP ALA LYS SEQRES 1 B 259 MET GLN GLN LEU GLN ASN VAL ILE GLU SER ALA PHE GLU SEQRES 2 B 259 ARG ARG ALA ASP ILE THR PRO ALA ASN VAL ASP THR VAL SEQRES 3 B 259 THR ARG GLU ALA VAL ASN GLN VAL ILE GLY LEU LEU ASP SEQRES 4 B 259 SER GLY ALA LEU ARG VAL ALA GLU LYS ILE ASP GLY GLN SEQRES 5 B 259 TRP VAL THR HIS GLN TRP LEU LYS LYS ALA VAL LEU LEU SEQRES 6 B 259 SER PHE ARG ILE ASN ASP ASN LYS VAL MET ASP GLY ALA SEQRES 7 B 259 GLU THR ARG TYR TYR ASP LYS VAL PRO MET LYS PHE ALA SEQRES 8 B 259 ASP TYR ASP GLU ALA ARG PHE GLN LYS GLU GLY PHE ARG SEQRES 9 B 259 VAL VAL PRO PRO ALA THR VAL ARG GLN GLY ALA PHE ILE SEQRES 10 B 259 ALA ARG ASN THR VAL LEU MET PRO SER TYR VAL ASN ILE SEQRES 11 B 259 GLY ALA TYR VAL ASP GLU GLY THR MET VAL ASP THR TRP SEQRES 12 B 259 ALA THR VAL GLY SER CYS ALA GLN ILE GLY LYS ASN VAL SEQRES 13 B 259 HIS LEU SER GLY GLY VAL GLY ILE GLY GLY VAL LEU GLU SEQRES 14 B 259 PRO LEU GLN ALA ASN PRO THR ILE ILE GLU ASP ASN CYS SEQRES 15 B 259 PHE ILE GLY ALA ARG SER GLU VAL VAL GLU GLY VAL ILE SEQRES 16 B 259 VAL GLU GLU GLY SER VAL ILE SER MET GLY VAL TYR LEU SEQRES 17 B 259 GLY GLN SER THR ARG ILE TYR ASP ARG GLU THR GLY GLU SEQRES 18 B 259 ILE HIS TYR GLY ARG VAL PRO ALA GLY SER VAL VAL VAL SEQRES 19 B 259 SER GLY ASN LEU PRO SER LYS ASP GLY SER TYR SER LEU SEQRES 20 B 259 TYR CYS ALA VAL ILE VAL LYS LYS VAL ASP ALA LYS SEQRES 1 C 259 MET GLN GLN LEU GLN ASN VAL ILE GLU SER ALA PHE GLU SEQRES 2 C 259 ARG ARG ALA ASP ILE THR PRO ALA ASN VAL ASP THR VAL SEQRES 3 C 259 THR ARG GLU ALA VAL ASN GLN VAL ILE GLY LEU LEU ASP SEQRES 4 C 259 SER GLY ALA LEU ARG VAL ALA GLU LYS ILE ASP GLY GLN SEQRES 5 C 259 TRP VAL THR HIS GLN TRP LEU LYS LYS ALA VAL LEU LEU SEQRES 6 C 259 SER PHE ARG ILE ASN ASP ASN LYS VAL MET ASP GLY ALA SEQRES 7 C 259 GLU THR ARG TYR TYR ASP LYS VAL PRO MET LYS PHE ALA SEQRES 8 C 259 ASP TYR ASP GLU ALA ARG PHE GLN LYS GLU GLY PHE ARG SEQRES 9 C 259 VAL VAL PRO PRO ALA THR VAL ARG GLN GLY ALA PHE ILE SEQRES 10 C 259 ALA ARG ASN THR VAL LEU MET PRO SER TYR VAL ASN ILE SEQRES 11 C 259 GLY ALA TYR VAL ASP GLU GLY THR MET VAL ASP THR TRP SEQRES 12 C 259 ALA THR VAL GLY SER CYS ALA GLN ILE GLY LYS ASN VAL SEQRES 13 C 259 HIS LEU SER GLY GLY VAL GLY ILE GLY GLY VAL LEU GLU SEQRES 14 C 259 PRO LEU GLN ALA ASN PRO THR ILE ILE GLU ASP ASN CYS SEQRES 15 C 259 PHE ILE GLY ALA ARG SER GLU VAL VAL GLU GLY VAL ILE SEQRES 16 C 259 VAL GLU GLU GLY SER VAL ILE SER MET GLY VAL TYR LEU SEQRES 17 C 259 GLY GLN SER THR ARG ILE TYR ASP ARG GLU THR GLY GLU SEQRES 18 C 259 ILE HIS TYR GLY ARG VAL PRO ALA GLY SER VAL VAL VAL SEQRES 19 C 259 SER GLY ASN LEU PRO SER LYS ASP GLY SER TYR SER LEU SEQRES 20 C 259 TYR CYS ALA VAL ILE VAL LYS LYS VAL ASP ALA LYS FORMUL 4 HOH *215(H2 O) HELIX 1 1 GLN A 2 ASP A 17 1 16 HELIX 2 2 THR A 25 ASP A 39 1 15 HELIX 3 3 GLN A 57 ILE A 69 1 13 HELIX 4 4 GLU A 95 GLU A 101 1 7 HELIX 5 5 GLN B 3 ASP B 17 1 15 HELIX 6 6 THR B 25 SER B 40 1 16 HELIX 7 7 GLN B 57 ILE B 69 1 13 HELIX 8 8 GLU B 95 GLU B 101 1 7 HELIX 9 9 GLN C 5 ASP C 17 1 13 HELIX 10 10 THR C 25 ASP C 39 1 15 HELIX 11 11 GLN C 57 ILE C 69 1 13 HELIX 12 12 GLU C 95 GLU C 101 1 7 SHEET 1 A 2 ALA A 46 ILE A 49 0 SHEET 2 A 2 GLN A 52 THR A 55 -1 N VAL A 54 O GLU A 47 SHEET 1 B 2 LYS A 73 ASP A 76 0 SHEET 2 B 2 ARG A 81 ASP A 84 -1 N ASP A 84 O LYS A 73 SHEET 1 C 2 SER A 126 VAL A 128 0 SHEET 2 C 2 ALA A 144 VAL A 146 1 N ALA A 144 O TYR A 127 SHEET 1 D 4 GLU A 221 HIS A 223 0 SHEET 2 D 4 ILE A 214 ASP A 216 -1 N ASP A 216 O GLU A 221 SHEET 3 D 4 SER A 246 LYS A 255 1 N ALA A 250 O TYR A 215 SHEET 4 D 4 SER A 231 PRO A 239 -1 N LEU A 238 O LEU A 247 SHEET 1 E 2 ALA B 46 ILE B 49 0 SHEET 2 E 2 GLN B 52 THR B 55 -1 N VAL B 54 O GLU B 47 SHEET 1 F 2 LYS B 73 ASP B 76 0 SHEET 2 F 2 ARG B 81 ASP B 84 -1 N ASP B 84 O LYS B 73 SHEET 1 G 2 SER B 126 VAL B 128 0 SHEET 2 G 2 ALA B 144 VAL B 146 1 N ALA B 144 O TYR B 127 SHEET 1 H 3 ILE B 214 ASP B 216 0 SHEET 2 H 3 SER B 246 LYS B 255 1 N ALA B 250 O TYR B 215 SHEET 3 H 3 SER B 231 PRO B 239 -1 N LEU B 238 O LEU B 247 SHEET 1 I 2 ALA C 46 ILE C 49 0 SHEET 2 I 2 GLN C 52 THR C 55 -1 N VAL C 54 O GLU C 47 SHEET 1 J 2 LYS C 73 ASP C 76 0 SHEET 2 J 2 ARG C 81 ASP C 84 -1 N ASP C 84 O LYS C 73 SHEET 1 K 2 SER C 126 VAL C 128 0 SHEET 2 K 2 ALA C 144 VAL C 146 1 N ALA C 144 O TYR C 127 SHEET 1 L 3 ILE C 214 ASP C 216 0 SHEET 2 L 3 SER C 246 ILE C 252 1 N ALA C 250 O TYR C 215 SHEET 3 L 3 VAL C 233 PRO C 239 -1 N LEU C 238 O LEU C 247 CISPEP 1 PRO A 107 PRO A 108 0 2.36 CISPEP 2 GLU A 169 PRO A 170 0 0.26 CISPEP 3 PRO B 107 PRO B 108 0 5.07 CISPEP 4 GLU B 169 PRO B 170 0 -2.63 CISPEP 5 PRO C 107 PRO C 108 0 3.42 CISPEP 6 GLU C 169 PRO C 170 0 0.77 CRYST1 60.600 107.900 70.700 90.00 113.00 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016502 0.000000 0.007005 0.00000 SCALE2 0.000000 0.009268 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015366 0.00000 MTRIX1 1 -0.168400 0.500370 -0.849280 -5.89603 1 MTRIX2 1 0.730350 0.641960 0.233400 -0.43918 1 MTRIX3 1 0.661690 -0.580960 -0.473550 -23.76383 1 MTRIX1 2 -0.168400 0.730350 0.661990 15.05919 1 MTRIX2 2 0.500370 0.641960 -0.580960 -10.57381 1 MTRIX3 2 -0.849280 0.233400 -0.473550 -16.15831 1