HEADER OXIDOREDUCTASE 05-FEB-96 1TEH TITLE STRUCTURE OF HUMAN LIVER CHICHI ALCOHOL DEHYDROGENASE (A GLUTATHIONE- TITLE 2 DEPENDENT FORMALDEHYDE DEHYDROGENASE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: HUMAN CHICHI ALCOHOL DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GLUTATHIONE-DEPENDENT FORMALDEHYDE DEHYDROGENASE, CLASS III COMPND 5 ADH; COMPND 6 EC: 1.1.1.1, 1.2.1.1; COMPND 7 OTHER_DETAILS: THE STRUCTURE FOR HOMODIMERIC CHI ALCOHOL COMPND 8 DEHYDROGENASE WAS SOLVED WITH ONE NAD+ PER SUBUNIT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 ORGAN: LIVER KEYWDS NAD+ DEPENDENT ALCOHOL DEHYDROGENASE GLUTATHIONE DEPENDENT KEYWDS 2 FORMALDEHYDE DEHYDROGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.-N.YANG,T.D.HURLEY REVDAT 4 14-FEB-24 1TEH 1 REMARK LINK REVDAT 3 13-JUL-11 1TEH 1 VERSN REVDAT 2 24-FEB-09 1TEH 1 VERSN REVDAT 1 07-DEC-96 1TEH 0 JRNL AUTH Z.N.YANG,W.F.BOSRON,T.D.HURLEY JRNL TITL STRUCTURE OF HUMAN CHI CHI ALCOHOL DEHYDROGENASE: A JRNL TITL 2 GLUTATHIONE-DEPENDENT FORMALDEHYDE DEHYDROGENASE. JRNL REF J.MOL.BIOL. V. 265 330 1997 JRNL REFN ISSN 0022-2836 JRNL PMID 9018047 JRNL DOI 10.1006/JMBI.1996.0731 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.D.HURLEY,W.F.BOSRON,C.L.STONE,L.M.AMZEL REMARK 1 TITL STRUCTURES OF THREE HUMAN BETA ALCOHOL DEHYDROGENASE REMARK 1 TITL 2 VARIANTS. CORRELATIONS WITH THEIR FUNCTIONAL DIFFERENCES REMARK 1 REF J.MOL.BIOL. V. 239 415 1994 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 89.2 REMARK 3 NUMBER OF REFLECTIONS : 23718 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5544 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 93 REMARK 3 SOLVENT ATOMS : 35 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.520 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.67 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.347 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; 1.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; 1.500 REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; 2.500 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1TEH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000176640. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAR-94 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH2R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE(002) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IIC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PROCESS REMARK 200 DATA SCALING SOFTWARE : SCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24896 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 60.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.5 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 67.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.25000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR 3.1 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15 MG/ML ENZYME IN 280 MM MES, PH 6.7, REMARK 280 2 MM NAD+, 8.0 % PEG8000 AT 295 K, SITTING-DROP METHOD., PH 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.80500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 34.80500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 70.62500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 100.77500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 70.62500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 100.77500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 34.80500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 70.62500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 100.77500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 34.80500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 70.62500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 100.77500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 5650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 34.80500 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 5370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 34.80500 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 ZN ZN B 378 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 4 -44.05 -130.07 REMARK 500 ALA A 42 145.59 -171.43 REMARK 500 GLU A 59 58.04 -117.71 REMARK 500 LEU A 65 -167.32 -60.29 REMARK 500 HIS A 67 -15.55 -142.34 REMARK 500 SER A 75 158.75 179.73 REMARK 500 THR A 81 -27.91 -145.05 REMARK 500 GLN A 96 70.29 -151.76 REMARK 500 PRO A 124 -4.74 -51.85 REMARK 500 CYS A 132 113.59 -164.16 REMARK 500 MET A 141 33.89 21.76 REMARK 500 THR A 143 -60.68 -107.78 REMARK 500 PHE A 146 40.80 -70.25 REMARK 500 PRO A 165 91.10 -57.40 REMARK 500 LYS A 168 -47.30 -138.07 REMARK 500 CYS A 174 -119.86 -167.36 REMARK 500 ASN A 185 -77.39 -87.23 REMARK 500 THR A 186 -72.48 -44.67 REMARK 500 LEU A 189 143.52 -38.41 REMARK 500 LEU A 200 41.48 -107.22 REMARK 500 ALA A 216 -169.25 -55.21 REMARK 500 SER A 217 -0.09 -143.46 REMARK 500 ARG A 218 83.56 179.35 REMARK 500 VAL A 272 -39.11 -36.83 REMARK 500 TRP A 286 -7.16 -159.94 REMARK 500 SER A 324 -84.67 -30.90 REMARK 500 SER A 337 20.52 -75.61 REMARK 500 VAL A 342 -49.46 -146.63 REMARK 500 GLU A 354 40.08 -87.34 REMARK 500 HIS A 363 8.24 -62.32 REMARK 500 ARG A 369 108.60 -176.04 REMARK 500 LEU B 65 -166.90 -64.29 REMARK 500 GLN B 96 75.92 -108.88 REMARK 500 GLU B 99 10.72 -147.52 REMARK 500 LYS B 101 -56.87 -29.76 REMARK 500 PRO B 106 -5.65 -56.46 REMARK 500 LEU B 110 77.24 -65.88 REMARK 500 LEU B 122 -167.50 -102.36 REMARK 500 ASP B 125 -24.64 -153.23 REMARK 500 PRO B 165 100.45 -54.37 REMARK 500 CYS B 174 -113.59 -151.89 REMARK 500 LYS B 188 56.50 71.00 REMARK 500 SER B 193 153.26 -42.28 REMARK 500 ALA B 216 152.34 -48.39 REMARK 500 PRO B 243 -5.40 -51.28 REMARK 500 PRO B 249 155.33 -47.16 REMARK 500 ILE B 269 -68.23 -136.22 REMARK 500 THR B 310 -4.09 -59.81 REMARK 500 SER B 324 -83.25 -13.35 REMARK 500 VAL B 342 -53.02 -130.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 376 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 46 SG REMARK 620 2 HIS A 67 NE2 123.0 REMARK 620 3 CYS A 174 SG 92.3 111.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 375 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 97 SG REMARK 620 2 CYS A 100 SG 107.5 REMARK 620 3 CYS A 103 SG 116.5 101.7 REMARK 620 4 CYS A 111 SG 109.1 117.7 104.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 376 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 46 SG REMARK 620 2 HIS B 67 NE2 120.9 REMARK 620 3 GLU B 68 OE2 97.6 127.0 REMARK 620 4 CYS B 174 SG 104.4 111.0 90.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 375 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 97 SG REMARK 620 2 CYS B 100 SG 107.0 REMARK 620 3 CYS B 103 SG 116.8 114.2 REMARK 620 4 CYS B 111 SG 111.6 104.8 101.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 378 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 360 CD REMARK 620 2 GLU B 360 OE1 30.9 REMARK 620 3 GLU B 360 OE2 31.5 62.3 REMARK 620 4 GLU B 360 OE1 78.6 77.9 78.7 REMARK 620 5 GLU B 360 OE2 106.0 78.7 129.7 62.3 REMARK 620 6 HIS B 363 ND1 107.4 90.5 124.3 145.6 83.9 REMARK 620 7 HIS B 363 ND1 115.4 145.6 83.9 90.5 124.3 115.1 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: ZN1 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: ZNA1 IN CHITOPH19.ZNC AND CHIPARAM1.ZNC. REMARK 800 REMARK 800 SITE_IDENTIFIER: ZN2 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: GLU 68 IS NEARLY-COORDINATED TO THE ZINC, 2.87 REMARK 800 ANGSTROMS. HOH A401 IS 3.18 ANGSTROMS TO THE ZINC. ZNB IN REMARK 800 CHITOPH19.ZNC AND CHIPARAM1.ZNC. ZNB IS SET TO BOND TO CYS 46, REMARK 800 HIS 67 AND CYS 174 IN CHITOPH19.ZNC AND CHIPARAM1.ZNC. REMARK 800 REMARK 800 SITE_IDENTIFIER: ZN3 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: ZNB1 IN CHITOPH19.ZNC AND CHIPARAM1.ZNC. REMARK 800 REMARK 800 SITE_IDENTIFIER: ZN4 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: GLU 68 IS COORDINATED TO THE ZINC, 2.04 REMARK 800 ANGSTROMS. ZNB IN CHITOPH19.ZNC AND CHIPARAM1.ZNC. ZNB IS SET TO REMARK 800 BOND TO CYS 46, HIS 67 AND CYS 174 IN CHITOPH19.ZNC AND REMARK 800 CHIPARAM1.ZNC. REMARK 800 REMARK 800 SITE_IDENTIFIER: ZNS REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: THIS ZINC IS POSITIONED ON CRYSTALLOGRAPHIC X REMARK 800 AXIS, THEREFORE ASSIGNED AN OCCUPANCY OF 0.5 IN ORDER TO BE REMARK 800 REFINED AS SPECIAL POSITION ATOM IN XPLOR. THE OTHER TWO LIGANDS REMARK 800 ARE HIS 360 AND GLU 363 FROM THE SYMMETRY COPIES. ZNS IS DEFINED REMARK 800 IN CHITOPH19.ZNS AND CHIPARAM19.ZNS. IT IS NOT PRESET TO BOND REMARK 800 WITH HIS AND GLU. REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 375 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 376 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 375 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 376 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 378 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 377 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 377 DBREF 1TEH A 3 374 UNP P11766 ADHX_HUMAN 1 373 DBREF 1TEH B 3 374 UNP P11766 ADHX_HUMAN 1 373 SEQRES 1 A 373 ALA ASN GLU VAL ILE LYS CYS LYS ALA ALA VAL ALA TRP SEQRES 2 A 373 GLU ALA GLY LYS PRO LEU SER ILE GLU GLU ILE GLU VAL SEQRES 3 A 373 ALA PRO PRO LYS ALA HIS GLU VAL ARG ILE LYS ILE ILE SEQRES 4 A 373 ALA THR ALA VAL CYS HIS THR ASP ALA TYR THR LEU SER SEQRES 5 A 373 GLY ALA ASP PRO GLU GLY CYS PHE PRO VAL ILE LEU GLY SEQRES 6 A 373 HIS GLU GLY ALA GLY ILE VAL GLU SER VAL GLY GLU GLY SEQRES 7 A 373 VAL THR LYS LEU LYS ALA GLY ASP THR VAL ILE PRO LEU SEQRES 8 A 373 TYR ILE PRO GLN CYS GLY GLU CYS LYS PHE CYS LEU ASN SEQRES 9 A 373 PRO LYS THR ASN LEU CYS GLN LYS ILE ARG VAL THR GLN SEQRES 10 A 373 GLY LYS GLY LEU MET PRO ASP GLY THR SER ARG PHE THR SEQRES 11 A 373 CYS LYS GLY LYS THR ILE LEU HIS TYR MET GLY THR SER SEQRES 12 A 373 THR PHE SER GLU TYR THR VAL VAL ALA ASP ILE SER VAL SEQRES 13 A 373 ALA LYS ILE ASP PRO LEU ALA PRO LEU ASP LYS VAL CYS SEQRES 14 A 373 LEU LEU GLY CYS GLY ILE SER THR GLY TYR GLY ALA ALA SEQRES 15 A 373 VAL ASN THR ALA LYS LEU GLU PRO GLY SER VAL CYS ALA SEQRES 16 A 373 VAL PHE GLY LEU GLY GLY VAL GLY LEU ALA VAL ILE MET SEQRES 17 A 373 GLY CYS LYS VAL ALA GLY ALA SER ARG ILE ILE GLY VAL SEQRES 18 A 373 ASP ILE ASN LYS ASP LYS PHE ALA ARG ALA LYS GLU PHE SEQRES 19 A 373 GLY ALA THR GLU CYS ILE ASN PRO GLN ASP PHE SER LYS SEQRES 20 A 373 PRO ILE GLN GLU VAL LEU ILE GLU MET THR ASP GLY GLY SEQRES 21 A 373 VAL ASP TYR SER PHE GLU CYS ILE GLY ASN VAL LYS VAL SEQRES 22 A 373 MET ARG ALA ALA LEU GLU ALA CYS HIS LYS GLY TRP GLY SEQRES 23 A 373 VAL SER VAL VAL VAL GLY VAL ALA ALA SER GLY GLU GLU SEQRES 24 A 373 ILE ALA THR ARG PRO PHE GLN LEU VAL THR GLY ARG THR SEQRES 25 A 373 TRP LYS GLY THR ALA PHE GLY GLY TRP LYS SER VAL GLU SEQRES 26 A 373 SER VAL PRO LYS LEU VAL SER GLU TYR MET SER LYS LYS SEQRES 27 A 373 ILE LYS VAL ASP GLU PHE VAL THR HIS ASN LEU SER PHE SEQRES 28 A 373 ASP GLU ILE ASN LYS ALA PHE GLU LEU MET HIS SER GLY SEQRES 29 A 373 LYS SER ILE ARG THR VAL VAL LYS ILE SEQRES 1 B 373 ALA ASN GLU VAL ILE LYS CYS LYS ALA ALA VAL ALA TRP SEQRES 2 B 373 GLU ALA GLY LYS PRO LEU SER ILE GLU GLU ILE GLU VAL SEQRES 3 B 373 ALA PRO PRO LYS ALA HIS GLU VAL ARG ILE LYS ILE ILE SEQRES 4 B 373 ALA THR ALA VAL CYS HIS THR ASP ALA TYR THR LEU SER SEQRES 5 B 373 GLY ALA ASP PRO GLU GLY CYS PHE PRO VAL ILE LEU GLY SEQRES 6 B 373 HIS GLU GLY ALA GLY ILE VAL GLU SER VAL GLY GLU GLY SEQRES 7 B 373 VAL THR LYS LEU LYS ALA GLY ASP THR VAL ILE PRO LEU SEQRES 8 B 373 TYR ILE PRO GLN CYS GLY GLU CYS LYS PHE CYS LEU ASN SEQRES 9 B 373 PRO LYS THR ASN LEU CYS GLN LYS ILE ARG VAL THR GLN SEQRES 10 B 373 GLY LYS GLY LEU MET PRO ASP GLY THR SER ARG PHE THR SEQRES 11 B 373 CYS LYS GLY LYS THR ILE LEU HIS TYR MET GLY THR SER SEQRES 12 B 373 THR PHE SER GLU TYR THR VAL VAL ALA ASP ILE SER VAL SEQRES 13 B 373 ALA LYS ILE ASP PRO LEU ALA PRO LEU ASP LYS VAL CYS SEQRES 14 B 373 LEU LEU GLY CYS GLY ILE SER THR GLY TYR GLY ALA ALA SEQRES 15 B 373 VAL ASN THR ALA LYS LEU GLU PRO GLY SER VAL CYS ALA SEQRES 16 B 373 VAL PHE GLY LEU GLY GLY VAL GLY LEU ALA VAL ILE MET SEQRES 17 B 373 GLY CYS LYS VAL ALA GLY ALA SER ARG ILE ILE GLY VAL SEQRES 18 B 373 ASP ILE ASN LYS ASP LYS PHE ALA ARG ALA LYS GLU PHE SEQRES 19 B 373 GLY ALA THR GLU CYS ILE ASN PRO GLN ASP PHE SER LYS SEQRES 20 B 373 PRO ILE GLN GLU VAL LEU ILE GLU MET THR ASP GLY GLY SEQRES 21 B 373 VAL ASP TYR SER PHE GLU CYS ILE GLY ASN VAL LYS VAL SEQRES 22 B 373 MET ARG ALA ALA LEU GLU ALA CYS HIS LYS GLY TRP GLY SEQRES 23 B 373 VAL SER VAL VAL VAL GLY VAL ALA ALA SER GLY GLU GLU SEQRES 24 B 373 ILE ALA THR ARG PRO PHE GLN LEU VAL THR GLY ARG THR SEQRES 25 B 373 TRP LYS GLY THR ALA PHE GLY GLY TRP LYS SER VAL GLU SEQRES 26 B 373 SER VAL PRO LYS LEU VAL SER GLU TYR MET SER LYS LYS SEQRES 27 B 373 ILE LYS VAL ASP GLU PHE VAL THR HIS ASN LEU SER PHE SEQRES 28 B 373 ASP GLU ILE ASN LYS ALA PHE GLU LEU MET HIS SER GLY SEQRES 29 B 373 LYS SER ILE ARG THR VAL VAL LYS ILE HET ZN A 375 1 HET ZN A 376 1 HET NAD A 377 44 HET ZN B 375 1 HET ZN B 376 1 HET ZN B 378 1 HET NAD B 377 44 HETNAM ZN ZINC ION HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE FORMUL 3 ZN 5(ZN 2+) FORMUL 5 NAD 2(C21 H27 N7 O14 P2) FORMUL 10 HOH *35(H2 O) HELIX 1 1 HIS A 47 SER A 54 1 8 HELIX 2 2 ARG A 115 GLY A 119 1 5 HELIX 3 3 LEU A 166 LEU A 172 1 7 HELIX 4 4 GLY A 175 VAL A 184 1 10 HELIX 5 5 GLY A 202 ALA A 214 1 13 HELIX 6 6 LYS A 226 PHE A 235 5 10 HELIX 7 7 PRO A 243 ASP A 245 5 3 HELIX 8 8 ILE A 250 THR A 258 1 9 HELIX 9 9 VAL A 272 ALA A 281 1 10 HELIX 10 10 PRO A 305 VAL A 309 5 5 HELIX 11 11 PHE A 319 GLY A 321 5 3 HELIX 12 12 SER A 324 MET A 336 1 13 HELIX 13 13 ASP A 343 PHE A 345 5 3 HELIX 14 14 ILE A 355 SER A 364 1 10 HELIX 15 15 HIS B 47 LEU B 53 1 7 HELIX 16 16 LYS B 101 LEU B 104 1 4 HELIX 17 17 ARG B 115 LYS B 120 1 6 HELIX 18 18 LEU B 166 GLY B 173 1 8 HELIX 19 19 GLY B 175 VAL B 184 1 10 HELIX 20 20 GLY B 202 ALA B 214 1 13 HELIX 21 21 LYS B 226 PHE B 235 5 10 HELIX 22 22 ILE B 250 MET B 257 1 8 HELIX 23 23 VAL B 272 ALA B 281 1 10 HELIX 24 24 PRO B 305 VAL B 309 5 5 HELIX 25 25 PHE B 319 GLY B 321 5 3 HELIX 26 26 SER B 324 MET B 336 1 13 HELIX 27 27 ASP B 343 PHE B 345 5 3 HELIX 28 28 PHE B 352 SER B 364 5 13 SHEET 1 A 2 ILE A 7 VAL A 13 0 SHEET 2 A 2 SER A 22 VAL A 28 -1 N VAL A 28 O ILE A 7 SHEET 1 B 3 TYR A 149 ALA A 153 0 SHEET 2 B 3 GLU A 35 ILE A 40 -1 N ILE A 38 O THR A 150 SHEET 3 B 3 GLY A 71 VAL A 76 -1 N SER A 75 O ARG A 37 SHEET 1 C 3 ALA A 42 VAL A 45 0 SHEET 2 C 3 THR A 370 LYS A 373 -1 N VAL A 372 O THR A 43 SHEET 3 C 3 HIS A 348 SER A 351 1 N HIS A 348 O VAL A 371 SHEET 1 D 2 VAL A 89 PRO A 91 0 SHEET 2 D 2 VAL A 157 LYS A 159 -1 N ALA A 158 O ILE A 90 SHEET 1 E 3 VAL A 194 PHE A 198 0 SHEET 2 E 3 ARG A 218 VAL A 222 1 N ARG A 218 O CYS A 195 SHEET 3 E 3 GLU A 239 ILE A 241 1 N GLU A 239 O GLY A 221 SHEET 1 F 3 TYR A 264 GLU A 267 0 SHEET 2 F 3 VAL A 288 VAL A 291 1 N VAL A 288 O SER A 265 SHEET 3 F 3 THR A 313 GLY A 316 1 N THR A 313 O SER A 289 SHEET 1 G 2 ILE B 7 VAL B 13 0 SHEET 2 G 2 SER B 22 VAL B 28 -1 N VAL B 28 O ILE B 7 SHEET 1 H 5 TYR B 149 ALA B 153 0 SHEET 2 H 5 GLU B 35 LYS B 39 -1 N ILE B 38 O THR B 150 SHEET 3 H 5 ALA B 70 VAL B 76 -1 N SER B 75 O ARG B 37 SHEET 4 H 5 THR B 88 PRO B 91 -1 N VAL B 89 O GLY B 71 SHEET 5 H 5 VAL B 157 LYS B 159 -1 N ALA B 158 O ILE B 90 SHEET 1 I 3 THR B 43 VAL B 45 0 SHEET 2 I 3 THR B 370 LYS B 373 -1 N VAL B 372 O THR B 43 SHEET 3 I 3 HIS B 348 SER B 351 1 N HIS B 348 O VAL B 371 SHEET 1 J 6 ARG B 312 GLY B 316 0 SHEET 2 J 6 GLY B 287 VAL B 291 1 N GLY B 287 O THR B 313 SHEET 3 J 6 TYR B 264 GLU B 267 1 N SER B 265 O VAL B 288 SHEET 4 J 6 VAL B 194 PHE B 198 1 N ALA B 196 O TYR B 264 SHEET 5 J 6 ARG B 218 VAL B 222 1 N ARG B 218 O CYS B 195 SHEET 6 J 6 GLU B 239 ILE B 241 1 N GLU B 239 O GLY B 221 LINK SG CYS A 46 ZN ZN A 376 1555 1555 2.32 LINK NE2 HIS A 67 ZN ZN A 376 1555 1555 2.06 LINK SG CYS A 97 ZN ZN A 375 1555 1555 2.18 LINK SG CYS A 100 ZN ZN A 375 1555 1555 2.30 LINK SG CYS A 103 ZN ZN A 375 1555 1555 2.06 LINK SG CYS A 111 ZN ZN A 375 1555 1555 2.25 LINK SG CYS A 174 ZN ZN A 376 1555 1555 2.18 LINK SG CYS B 46 ZN ZN B 376 1555 1555 2.33 LINK NE2 HIS B 67 ZN ZN B 376 1555 1555 2.03 LINK OE2 GLU B 68 ZN ZN B 376 1555 1555 2.04 LINK SG CYS B 97 ZN ZN B 375 1555 1555 2.18 LINK SG CYS B 100 ZN ZN B 375 1555 1555 2.32 LINK SG CYS B 103 ZN ZN B 375 1555 1555 2.13 LINK SG CYS B 111 ZN ZN B 375 1555 1555 2.08 LINK SG CYS B 174 ZN ZN B 376 1555 1555 2.29 LINK CD GLU B 360 ZN ZN B 378 1555 1555 2.40 LINK OE1 GLU B 360 ZN ZN B 378 1555 1555 2.30 LINK OE2 GLU B 360 ZN ZN B 378 1555 1555 1.93 LINK OE1 GLU B 360 ZN ZN B 378 4556 1555 2.30 LINK OE2 GLU B 360 ZN ZN B 378 4556 1555 1.93 LINK ND1 HIS B 363 ZN ZN B 378 1555 1555 2.12 LINK ND1 HIS B 363 ZN ZN B 378 4556 1555 2.12 CISPEP 1 PHE A 61 PRO A 62 0 -0.19 CISPEP 2 PHE B 61 PRO B 62 0 -0.10 SITE 1 ZN1 5 CYS A 97 CYS A 100 CYS A 103 CYS A 111 SITE 2 ZN1 5 ZN A 375 SITE 1 ZN2 6 CYS A 46 HIS A 67 GLU A 68 CYS A 174 SITE 2 ZN2 6 HOH A 378 ZN A 376 SITE 1 ZN3 5 CYS B 97 CYS B 100 CYS B 103 CYS B 111 SITE 2 ZN3 5 ZN B 375 SITE 1 ZN4 5 CYS B 46 HIS B 67 GLU B 68 CYS B 174 SITE 2 ZN4 5 ZN B 376 SITE 1 ZNS 3 GLU B 360 HIS B 363 ZN B 378 SITE 1 AC1 4 CYS A 97 CYS A 100 CYS A 103 CYS A 111 SITE 1 AC2 4 CYS A 46 HIS A 67 GLU A 68 CYS A 174 SITE 1 AC3 5 CYS B 97 GLY B 98 CYS B 100 CYS B 103 SITE 2 AC3 5 CYS B 111 SITE 1 AC4 5 CYS B 46 HIS B 67 GLU B 68 CYS B 174 SITE 2 AC4 5 ARG B 369 SITE 1 AC5 2 GLU B 360 HIS B 363 SITE 1 AC6 18 HIS A 47 TYR A 93 THR A 178 GLY A 202 SITE 2 AC6 18 VAL A 203 ASP A 223 ILE A 224 CYS A 268 SITE 3 AC6 18 ILE A 269 VAL A 274 VAL A 292 GLY A 293 SITE 4 AC6 18 VAL A 294 THR A 317 ALA A 318 PHE A 319 SITE 5 AC6 18 ARG A 369 HOH A 382 SITE 1 AC7 18 HIS B 47 THR B 178 LEU B 200 GLY B 201 SITE 2 AC7 18 GLY B 202 VAL B 203 ASP B 223 ILE B 224 SITE 3 AC7 18 LYS B 228 CYS B 268 ILE B 269 VAL B 274 SITE 4 AC7 18 VAL B 292 GLY B 293 VAL B 294 THR B 317 SITE 5 AC7 18 PHE B 319 ARG B 369 CRYST1 141.250 201.550 69.610 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007080 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004962 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014366 0.00000 MTRIX1 1 0.603800 0.003200 -0.797100 13.70100 1 MTRIX2 1 0.012100 0.999800 0.013100 -38.44000 1 MTRIX3 1 0.797000 -0.017600 0.603700 7.91400 1