HEADER LYASE/DNA 26-MAY-04 1TEZ TITLE COMPLEX BETWEEN DNA AND THE DNA PHOTOLYASE FROM ANACYSTIS NIDULANS CAVEAT 1TEZ HDF A 5486 HAS WRONG CHIRALITY AT ATOM C2' HDF A 5486 HAS CAVEAT 2 1TEZ WRONG CHIRALITY AT ATOM C4' HDF B 6486 HAS WRONG CHIRALITY CAVEAT 3 1TEZ AT ATOM C2' HDF B 6486 HAS WRONG CHIRALITY AT ATOM C4' HDF CAVEAT 4 1TEZ C 7486 HAS WRONG CHIRALITY AT ATOM C2' HDF C 7486 HAS WRONG CAVEAT 5 1TEZ CHIRALITY AT ATOM C4' HDF D 8486 HAS WRONG CHIRALITY AT CAVEAT 6 1TEZ ATOM C2' HDF D 8486 HAS WRONG CHIRALITY AT ATOM C4' COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*AP*TP*CP*GP*GP*CP*T*(TCP)P*CP*GP*C)-3'; COMPND 3 CHAIN: I, K; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: FORMACETAL LINKAGE REPLACES PHOSPHATE LINKAGE BETWEEN COMPND 6 T7 AND T8 OF CHAINS I AND K; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 5'-D(P*CP*GP*AP*AP*GP*CP*CP*GP*A)-3'; COMPND 9 CHAIN: J, L; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: 5'-D(*TP*CP*GP*C)-3'; COMPND 13 CHAIN: M, O; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: 5'-D(P*GP*CP*CP*GP*A)-3'; COMPND 17 CHAIN: N, P; COMPND 18 ENGINEERED: YES; COMPND 19 MOL_ID: 5; COMPND 20 MOLECULE: DEOXYRIBODIPYRIMIDINE PHOTOLYASE; COMPND 21 CHAIN: A, B, C, D; COMPND 22 SYNONYM: DNA PHOTOLYASE; PHOTOREACTIVATING ENZYME; COMPND 23 EC: 4.1.99.3; COMPND 24 ENGINEERED: YES; COMPND 25 OTHER_DETAILS: SYNTHETIC DNA OLIGONUCLEOTIDES ENGINEERED AS COMPND 26 COUNTERSTRAND SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 SYNTHETIC: YES; SOURCE 5 MOL_ID: 3; SOURCE 6 SYNTHETIC: YES; SOURCE 7 MOL_ID: 4; SOURCE 8 SYNTHETIC: YES; SOURCE 9 MOL_ID: 5; SOURCE 10 ORGANISM_SCIENTIFIC: SYNECHOCOCCUS ELONGATUS; SOURCE 11 ORGANISM_TAXID: 269084; SOURCE 12 STRAIN: PCC 6301; SOURCE 13 CELLULAR_LOCATION: CYTOPLASM; SOURCE 14 GENE: PHR; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_CELLULAR_LOCATION: CYTOPLASM; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS PHOTOLYASE; DNA REPAIR; LIGHT-DRIVEN ELECTRON TRANSFER, LYASE-DNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR L.-O.ESSEN,T.CARELL,A.MEES,T.KLAR REVDAT 5 23-AUG-23 1TEZ 1 REMARK LINK REVDAT 4 30-MAY-18 1TEZ 1 CAVEAT REMARK REVDAT 3 13-JUL-11 1TEZ 1 VERSN REVDAT 2 24-FEB-09 1TEZ 1 VERSN REVDAT 1 14-DEC-04 1TEZ 0 JRNL AUTH A.MEES,T.KLAR,P.GNAU,U.HENNECKE,A.P.M.EKER,T.CARELL, JRNL AUTH 2 L.-O.ESSEN JRNL TITL CRYSTAL STRUCTURE OF A PHOTOLYASE BOUND TO A CPD-LIKE DNA JRNL TITL 2 LESION AFTER IN SITU REPAIR JRNL REF SCIENCE V. 306 1789 2004 JRNL REFN ISSN 0036-8075 JRNL PMID 15576622 JRNL DOI 10.1126/SCIENCE.1101598 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.TAMADA,K.KITADOKORO,Y.HIGUCHI,K.INAKA,A.YASUI, REMARK 1 AUTH 2 P.E.DE RUITER,A.P.EKER,K.MIKI REMARK 1 TITL CRYSTAL STRUCTURE OF DNA PHOTOLYASE FROM ANACYSTIS REMARK 1 REF NAT.STRUCT.BIOL. V. 4 887 1997 REMARK 1 REFN ISSN 1072-8368 REMARK 1 PMID 9360600 REMARK 1 DOI 10.1038/NSB1197-887 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.92 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 218104 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : SHELLS REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.400 REMARK 3 FREE R VALUE TEST SET COUNT : 7425 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 29841 REMARK 3 BIN R VALUE (WORKING SET) : 0.2850 REMARK 3 BIN FREE R VALUE : 0.2940 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 1188 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.009 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 15106 REMARK 3 NUCLEIC ACID ATOMS : 1012 REMARK 3 HETEROGEN ATOMS : 474 REMARK 3 SOLVENT ATOMS : 1614 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.70000 REMARK 3 B22 (A**2) : -0.46000 REMARK 3 B33 (A**2) : -5.24000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.35000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM SIGMAA (A) : 0.18 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.19 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 20.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.960 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 53.76 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : COFACS.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : DNA-RNA_NEW.TOP REMARK 3 TOPOLOGY FILE 4 : COFACS.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1TEZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JUN-04. REMARK 100 THE DEPOSITION ID IS D_1000022595. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JAN-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 218105 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.39900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1QNF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, MAGNESIUM CHLORIDE, TRIS REMARK 280 -HCL, PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 281K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 86.90750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.25250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 86.90750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 44.25250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, J, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: K, L, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: M, N, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: O, P, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 COMPOUND REMARK 400 REMARK 400 THE CYCLOBUTANE RING OF THE CPD-DAMAGE I7-I8 AND K7-K8 WAS REMARK 400 FOUND TO BE CLEAVED REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TCP I 8 REMARK 465 DC I 9 REMARK 465 DG I 10 REMARK 465 DC I 11 REMARK 465 TCP K 8 REMARK 465 DC K 9 REMARK 465 DG K 10 REMARK 465 DC K 11 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 68 CD OE1 NE2 REMARK 470 ARG A 223 CD NE CZ NH1 NH2 REMARK 470 ARG C 223 CD NE CZ NH1 NH2 REMARK 470 LYS C 435 CG CD CE NZ REMARK 470 ARG D 223 CD NE CZ NH1 NH2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 DT M 8 O5' REMARK 480 LYS A 413 CE NZ REMARK 480 ARG B 269 CD NE CZ NH1 NH2 REMARK 480 LYS B 413 NZ REMARK 480 LYS D 401 CE NZ REMARK 480 LYS D 435 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 8619 O HOH D 8840 2.17 REMARK 500 O HOH D 8502 O HOH D 8840 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 10 -60.25 -138.83 REMARK 500 ASP A 12 57.14 -142.60 REMARK 500 ASP A 17 56.49 34.55 REMARK 500 ASP A 46 48.88 -97.26 REMARK 500 SER A 71 -123.86 -126.09 REMARK 500 ASP A 129 -36.37 -135.89 REMARK 500 ASP A 201 23.49 -142.66 REMARK 500 ARG A 223 -80.37 -144.68 REMARK 500 SER A 396 63.03 -115.98 REMARK 500 ASP A 416 51.47 -150.42 REMARK 500 ARG A 448 54.01 35.47 REMARK 500 ARG B 10 -57.68 -140.61 REMARK 500 ASP B 12 57.10 -140.79 REMARK 500 ASP B 17 57.91 34.57 REMARK 500 SER B 71 -125.94 -124.79 REMARK 500 ASP B 129 -37.25 -134.64 REMARK 500 ASP B 201 23.33 -148.68 REMARK 500 ARG B 223 -83.89 -147.88 REMARK 500 SER B 396 59.84 -107.36 REMARK 500 ASP B 416 51.44 -150.56 REMARK 500 ARG B 448 60.21 27.77 REMARK 500 ALA B 474 32.61 -73.09 REMARK 500 ARG C 10 -58.37 -140.53 REMARK 500 ASP C 12 57.10 -142.25 REMARK 500 ASP C 17 58.70 32.80 REMARK 500 SER C 71 -124.88 -124.69 REMARK 500 ASP C 129 -37.81 -134.29 REMARK 500 ASP C 201 24.26 -147.11 REMARK 500 ARG C 223 -83.02 -150.27 REMARK 500 PRO C 304 114.67 -37.48 REMARK 500 LYS C 401 177.70 169.31 REMARK 500 PRO C 402 158.16 -41.53 REMARK 500 ASP C 416 52.63 -150.50 REMARK 500 ARG C 448 61.26 27.44 REMARK 500 ALA C 474 18.25 -66.65 REMARK 500 ARG D 10 -59.44 -139.49 REMARK 500 ASP D 12 56.82 -142.26 REMARK 500 ASP D 17 57.26 33.47 REMARK 500 ASP D 46 49.89 -95.09 REMARK 500 SER D 71 -123.42 -124.93 REMARK 500 ASP D 129 -36.48 -138.25 REMARK 500 ASP D 201 23.57 -142.91 REMARK 500 ARG D 223 -80.17 -144.04 REMARK 500 ARG D 404 112.40 146.99 REMARK 500 ASP D 416 51.83 -148.53 REMARK 500 ARG D 448 55.71 34.04 REMARK 500 ALA D 474 40.16 -76.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A9292 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH A9390 DISTANCE = 7.40 ANGSTROMS REMARK 525 HOH A9391 DISTANCE = 6.76 ANGSTROMS REMARK 525 HOH B9350 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH C7689 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH C7777 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH C7831 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH D8766 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH D8832 DISTANCE = 5.83 ANGSTROMS REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 DESOXYTHYMIDINE NUCLEOSIDE WITH FORMACETAL LINKAGE AT REMARK 600 5'-HYDROXYL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 C I 13 REMARK 610 G I 14 REMARK 610 C I 15 REMARK 610 C K 13 REMARK 610 G K 14 REMARK 610 C K 15 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A9002 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC J 12 OP1 REMARK 620 2 HOH J1610 O 88.4 REMARK 620 3 HOH J1611 O 106.0 88.0 REMARK 620 4 ASP A 399 OD2 86.6 87.0 166.3 REMARK 620 5 HOH A9410 O 91.0 174.8 97.2 87.8 REMARK 620 6 HOH A9411 O 164.5 90.5 89.4 77.9 88.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B9001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC L 12 OP1 REMARK 620 2 HOH L1609 O 89.1 REMARK 620 3 ASP B 399 OD1 86.9 165.6 REMARK 620 4 HOH B9305 O 91.0 78.5 87.7 REMARK 620 5 HOH B9405 O 170.7 97.0 85.5 83.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 9001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 9002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C I 13 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE G I 14 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C I 15 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C K 13 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE G K 14 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C K 15 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 5485 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HDF A 5486 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD B 6485 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HDF B 6486 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD C 7485 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HDF C 7486 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD D 8485 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HDF D 8486 DBREF 1TEZ A 2 475 UNP P05327 PHR_SYNLE 1 474 DBREF 1TEZ B 2 475 UNP P05327 PHR_SYNLE 1 474 DBREF 1TEZ C 2 475 UNP P05327 PHR_SYNLE 1 474 DBREF 1TEZ D 2 475 UNP P05327 PHR_SYNLE 1 474 DBREF 1TEZ I 1 11 PDB 1TEZ 1TEZ 1 11 DBREF 1TEZ J 6 14 PDB 1TEZ 1TEZ 6 14 DBREF 1TEZ K 1 11 PDB 1TEZ 1TEZ 1 11 DBREF 1TEZ L 6 14 PDB 1TEZ 1TEZ 6 14 DBREF 1TEZ M 8 11 PDB 1TEZ 1TEZ 8 11 DBREF 1TEZ N 10 14 PDB 1TEZ 1TEZ 10 14 DBREF 1TEZ O 8 11 PDB 1TEZ 1TEZ 8 11 DBREF 1TEZ P 10 14 PDB 1TEZ 1TEZ 10 14 SEQRES 1 I 11 DA DT DC DG DG DC DT TCP DC DG DC SEQRES 1 J 9 DC DG DA DA DG DC DC DG DA SEQRES 1 K 11 DA DT DC DG DG DC DT TCP DC DG DC SEQRES 1 L 9 DC DG DA DA DG DC DC DG DA SEQRES 1 M 4 DT DC DG DC SEQRES 1 N 5 DG DC DC DG DA SEQRES 1 O 4 DT DC DG DC SEQRES 1 P 5 DG DC DC DG DA SEQRES 1 A 474 ALA ALA PRO ILE LEU PHE TRP HIS ARG ARG ASP LEU ARG SEQRES 2 A 474 LEU SER ASP ASN ILE GLY LEU ALA ALA ALA ARG ALA GLN SEQRES 3 A 474 SER ALA GLN LEU ILE GLY LEU PHE CYS LEU ASP PRO GLN SEQRES 4 A 474 ILE LEU GLN SER ALA ASP MET ALA PRO ALA ARG VAL ALA SEQRES 5 A 474 TYR LEU GLN GLY CYS LEU GLN GLU LEU GLN GLN ARG TYR SEQRES 6 A 474 GLN GLN ALA GLY SER ARG LEU LEU LEU LEU GLN GLY ASP SEQRES 7 A 474 PRO GLN HIS LEU ILE PRO GLN LEU ALA GLN GLN LEU GLN SEQRES 8 A 474 ALA GLU ALA VAL TYR TRP ASN GLN ASP ILE GLU PRO TYR SEQRES 9 A 474 GLY ARG ASP ARG ASP GLY GLN VAL ALA ALA ALA LEU LYS SEQRES 10 A 474 THR ALA GLY ILE ARG ALA VAL GLN LEU TRP ASP GLN LEU SEQRES 11 A 474 LEU HIS SER PRO ASP GLN ILE LEU SER GLY SER GLY ASN SEQRES 12 A 474 PRO TYR SER VAL TYR GLY PRO PHE TRP LYS ASN TRP GLN SEQRES 13 A 474 ALA GLN PRO LYS PRO THR PRO VAL ALA THR PRO THR GLU SEQRES 14 A 474 LEU VAL ASP LEU SER PRO GLU GLN LEU THR ALA ILE ALA SEQRES 15 A 474 PRO LEU LEU LEU SER GLU LEU PRO THR LEU LYS GLN LEU SEQRES 16 A 474 GLY PHE ASP TRP ASP GLY GLY PHE PRO VAL GLU PRO GLY SEQRES 17 A 474 GLU THR ALA ALA ILE ALA ARG LEU GLN GLU PHE CYS ASP SEQRES 18 A 474 ARG ALA ILE ALA ASP TYR ASP PRO GLN ARG ASN PHE PRO SEQRES 19 A 474 ALA GLU ALA GLY THR SER GLY LEU SER PRO ALA LEU LYS SEQRES 20 A 474 PHE GLY ALA ILE GLY ILE ARG GLN ALA TRP GLN ALA ALA SEQRES 21 A 474 SER ALA ALA HIS ALA LEU SER ARG SER ASP GLU ALA ARG SEQRES 22 A 474 ASN SER ILE ARG VAL TRP GLN GLN GLU LEU ALA TRP ARG SEQRES 23 A 474 GLU PHE TYR GLN HIS ALA LEU TYR HIS PHE PRO SER LEU SEQRES 24 A 474 ALA ASP GLY PRO TYR ARG SER LEU TRP GLN GLN PHE PRO SEQRES 25 A 474 TRP GLU ASN ARG GLU ALA LEU PHE THR ALA TRP THR GLN SEQRES 26 A 474 ALA GLN THR GLY TYR PRO ILE VAL ASP ALA ALA MET ARG SEQRES 27 A 474 GLN LEU THR GLU THR GLY TRP MET HIS ASN ARG CYS ARG SEQRES 28 A 474 MET ILE VAL ALA SER PHE LEU THR LYS ASP LEU ILE ILE SEQRES 29 A 474 ASP TRP ARG ARG GLY GLU GLN PHE PHE MET GLN HIS LEU SEQRES 30 A 474 VAL ASP GLY ASP LEU ALA ALA ASN ASN GLY GLY TRP GLN SEQRES 31 A 474 TRP SER ALA SER SER GLY MET ASP PRO LYS PRO LEU ARG SEQRES 32 A 474 ILE PHE ASN PRO ALA SER GLN ALA LYS LYS PHE ASP ALA SEQRES 33 A 474 THR ALA THR TYR ILE LYS ARG TRP LEU PRO GLU LEU ARG SEQRES 34 A 474 HIS VAL HIS PRO LYS ASP LEU ILE SER GLY GLU ILE THR SEQRES 35 A 474 PRO ILE GLU ARG ARG GLY TYR PRO ALA PRO ILE VAL ASN SEQRES 36 A 474 HIS ASN LEU ARG GLN LYS GLN PHE LYS ALA LEU TYR ASN SEQRES 37 A 474 GLN LEU LYS ALA ALA ILE SEQRES 1 B 474 ALA ALA PRO ILE LEU PHE TRP HIS ARG ARG ASP LEU ARG SEQRES 2 B 474 LEU SER ASP ASN ILE GLY LEU ALA ALA ALA ARG ALA GLN SEQRES 3 B 474 SER ALA GLN LEU ILE GLY LEU PHE CYS LEU ASP PRO GLN SEQRES 4 B 474 ILE LEU GLN SER ALA ASP MET ALA PRO ALA ARG VAL ALA SEQRES 5 B 474 TYR LEU GLN GLY CYS LEU GLN GLU LEU GLN GLN ARG TYR SEQRES 6 B 474 GLN GLN ALA GLY SER ARG LEU LEU LEU LEU GLN GLY ASP SEQRES 7 B 474 PRO GLN HIS LEU ILE PRO GLN LEU ALA GLN GLN LEU GLN SEQRES 8 B 474 ALA GLU ALA VAL TYR TRP ASN GLN ASP ILE GLU PRO TYR SEQRES 9 B 474 GLY ARG ASP ARG ASP GLY GLN VAL ALA ALA ALA LEU LYS SEQRES 10 B 474 THR ALA GLY ILE ARG ALA VAL GLN LEU TRP ASP GLN LEU SEQRES 11 B 474 LEU HIS SER PRO ASP GLN ILE LEU SER GLY SER GLY ASN SEQRES 12 B 474 PRO TYR SER VAL TYR GLY PRO PHE TRP LYS ASN TRP GLN SEQRES 13 B 474 ALA GLN PRO LYS PRO THR PRO VAL ALA THR PRO THR GLU SEQRES 14 B 474 LEU VAL ASP LEU SER PRO GLU GLN LEU THR ALA ILE ALA SEQRES 15 B 474 PRO LEU LEU LEU SER GLU LEU PRO THR LEU LYS GLN LEU SEQRES 16 B 474 GLY PHE ASP TRP ASP GLY GLY PHE PRO VAL GLU PRO GLY SEQRES 17 B 474 GLU THR ALA ALA ILE ALA ARG LEU GLN GLU PHE CYS ASP SEQRES 18 B 474 ARG ALA ILE ALA ASP TYR ASP PRO GLN ARG ASN PHE PRO SEQRES 19 B 474 ALA GLU ALA GLY THR SER GLY LEU SER PRO ALA LEU LYS SEQRES 20 B 474 PHE GLY ALA ILE GLY ILE ARG GLN ALA TRP GLN ALA ALA SEQRES 21 B 474 SER ALA ALA HIS ALA LEU SER ARG SER ASP GLU ALA ARG SEQRES 22 B 474 ASN SER ILE ARG VAL TRP GLN GLN GLU LEU ALA TRP ARG SEQRES 23 B 474 GLU PHE TYR GLN HIS ALA LEU TYR HIS PHE PRO SER LEU SEQRES 24 B 474 ALA ASP GLY PRO TYR ARG SER LEU TRP GLN GLN PHE PRO SEQRES 25 B 474 TRP GLU ASN ARG GLU ALA LEU PHE THR ALA TRP THR GLN SEQRES 26 B 474 ALA GLN THR GLY TYR PRO ILE VAL ASP ALA ALA MET ARG SEQRES 27 B 474 GLN LEU THR GLU THR GLY TRP MET HIS ASN ARG CYS ARG SEQRES 28 B 474 MET ILE VAL ALA SER PHE LEU THR LYS ASP LEU ILE ILE SEQRES 29 B 474 ASP TRP ARG ARG GLY GLU GLN PHE PHE MET GLN HIS LEU SEQRES 30 B 474 VAL ASP GLY ASP LEU ALA ALA ASN ASN GLY GLY TRP GLN SEQRES 31 B 474 TRP SER ALA SER SER GLY MET ASP PRO LYS PRO LEU ARG SEQRES 32 B 474 ILE PHE ASN PRO ALA SER GLN ALA LYS LYS PHE ASP ALA SEQRES 33 B 474 THR ALA THR TYR ILE LYS ARG TRP LEU PRO GLU LEU ARG SEQRES 34 B 474 HIS VAL HIS PRO LYS ASP LEU ILE SER GLY GLU ILE THR SEQRES 35 B 474 PRO ILE GLU ARG ARG GLY TYR PRO ALA PRO ILE VAL ASN SEQRES 36 B 474 HIS ASN LEU ARG GLN LYS GLN PHE LYS ALA LEU TYR ASN SEQRES 37 B 474 GLN LEU LYS ALA ALA ILE SEQRES 1 C 474 ALA ALA PRO ILE LEU PHE TRP HIS ARG ARG ASP LEU ARG SEQRES 2 C 474 LEU SER ASP ASN ILE GLY LEU ALA ALA ALA ARG ALA GLN SEQRES 3 C 474 SER ALA GLN LEU ILE GLY LEU PHE CYS LEU ASP PRO GLN SEQRES 4 C 474 ILE LEU GLN SER ALA ASP MET ALA PRO ALA ARG VAL ALA SEQRES 5 C 474 TYR LEU GLN GLY CYS LEU GLN GLU LEU GLN GLN ARG TYR SEQRES 6 C 474 GLN GLN ALA GLY SER ARG LEU LEU LEU LEU GLN GLY ASP SEQRES 7 C 474 PRO GLN HIS LEU ILE PRO GLN LEU ALA GLN GLN LEU GLN SEQRES 8 C 474 ALA GLU ALA VAL TYR TRP ASN GLN ASP ILE GLU PRO TYR SEQRES 9 C 474 GLY ARG ASP ARG ASP GLY GLN VAL ALA ALA ALA LEU LYS SEQRES 10 C 474 THR ALA GLY ILE ARG ALA VAL GLN LEU TRP ASP GLN LEU SEQRES 11 C 474 LEU HIS SER PRO ASP GLN ILE LEU SER GLY SER GLY ASN SEQRES 12 C 474 PRO TYR SER VAL TYR GLY PRO PHE TRP LYS ASN TRP GLN SEQRES 13 C 474 ALA GLN PRO LYS PRO THR PRO VAL ALA THR PRO THR GLU SEQRES 14 C 474 LEU VAL ASP LEU SER PRO GLU GLN LEU THR ALA ILE ALA SEQRES 15 C 474 PRO LEU LEU LEU SER GLU LEU PRO THR LEU LYS GLN LEU SEQRES 16 C 474 GLY PHE ASP TRP ASP GLY GLY PHE PRO VAL GLU PRO GLY SEQRES 17 C 474 GLU THR ALA ALA ILE ALA ARG LEU GLN GLU PHE CYS ASP SEQRES 18 C 474 ARG ALA ILE ALA ASP TYR ASP PRO GLN ARG ASN PHE PRO SEQRES 19 C 474 ALA GLU ALA GLY THR SER GLY LEU SER PRO ALA LEU LYS SEQRES 20 C 474 PHE GLY ALA ILE GLY ILE ARG GLN ALA TRP GLN ALA ALA SEQRES 21 C 474 SER ALA ALA HIS ALA LEU SER ARG SER ASP GLU ALA ARG SEQRES 22 C 474 ASN SER ILE ARG VAL TRP GLN GLN GLU LEU ALA TRP ARG SEQRES 23 C 474 GLU PHE TYR GLN HIS ALA LEU TYR HIS PHE PRO SER LEU SEQRES 24 C 474 ALA ASP GLY PRO TYR ARG SER LEU TRP GLN GLN PHE PRO SEQRES 25 C 474 TRP GLU ASN ARG GLU ALA LEU PHE THR ALA TRP THR GLN SEQRES 26 C 474 ALA GLN THR GLY TYR PRO ILE VAL ASP ALA ALA MET ARG SEQRES 27 C 474 GLN LEU THR GLU THR GLY TRP MET HIS ASN ARG CYS ARG SEQRES 28 C 474 MET ILE VAL ALA SER PHE LEU THR LYS ASP LEU ILE ILE SEQRES 29 C 474 ASP TRP ARG ARG GLY GLU GLN PHE PHE MET GLN HIS LEU SEQRES 30 C 474 VAL ASP GLY ASP LEU ALA ALA ASN ASN GLY GLY TRP GLN SEQRES 31 C 474 TRP SER ALA SER SER GLY MET ASP PRO LYS PRO LEU ARG SEQRES 32 C 474 ILE PHE ASN PRO ALA SER GLN ALA LYS LYS PHE ASP ALA SEQRES 33 C 474 THR ALA THR TYR ILE LYS ARG TRP LEU PRO GLU LEU ARG SEQRES 34 C 474 HIS VAL HIS PRO LYS ASP LEU ILE SER GLY GLU ILE THR SEQRES 35 C 474 PRO ILE GLU ARG ARG GLY TYR PRO ALA PRO ILE VAL ASN SEQRES 36 C 474 HIS ASN LEU ARG GLN LYS GLN PHE LYS ALA LEU TYR ASN SEQRES 37 C 474 GLN LEU LYS ALA ALA ILE SEQRES 1 D 474 ALA ALA PRO ILE LEU PHE TRP HIS ARG ARG ASP LEU ARG SEQRES 2 D 474 LEU SER ASP ASN ILE GLY LEU ALA ALA ALA ARG ALA GLN SEQRES 3 D 474 SER ALA GLN LEU ILE GLY LEU PHE CYS LEU ASP PRO GLN SEQRES 4 D 474 ILE LEU GLN SER ALA ASP MET ALA PRO ALA ARG VAL ALA SEQRES 5 D 474 TYR LEU GLN GLY CYS LEU GLN GLU LEU GLN GLN ARG TYR SEQRES 6 D 474 GLN GLN ALA GLY SER ARG LEU LEU LEU LEU GLN GLY ASP SEQRES 7 D 474 PRO GLN HIS LEU ILE PRO GLN LEU ALA GLN GLN LEU GLN SEQRES 8 D 474 ALA GLU ALA VAL TYR TRP ASN GLN ASP ILE GLU PRO TYR SEQRES 9 D 474 GLY ARG ASP ARG ASP GLY GLN VAL ALA ALA ALA LEU LYS SEQRES 10 D 474 THR ALA GLY ILE ARG ALA VAL GLN LEU TRP ASP GLN LEU SEQRES 11 D 474 LEU HIS SER PRO ASP GLN ILE LEU SER GLY SER GLY ASN SEQRES 12 D 474 PRO TYR SER VAL TYR GLY PRO PHE TRP LYS ASN TRP GLN SEQRES 13 D 474 ALA GLN PRO LYS PRO THR PRO VAL ALA THR PRO THR GLU SEQRES 14 D 474 LEU VAL ASP LEU SER PRO GLU GLN LEU THR ALA ILE ALA SEQRES 15 D 474 PRO LEU LEU LEU SER GLU LEU PRO THR LEU LYS GLN LEU SEQRES 16 D 474 GLY PHE ASP TRP ASP GLY GLY PHE PRO VAL GLU PRO GLY SEQRES 17 D 474 GLU THR ALA ALA ILE ALA ARG LEU GLN GLU PHE CYS ASP SEQRES 18 D 474 ARG ALA ILE ALA ASP TYR ASP PRO GLN ARG ASN PHE PRO SEQRES 19 D 474 ALA GLU ALA GLY THR SER GLY LEU SER PRO ALA LEU LYS SEQRES 20 D 474 PHE GLY ALA ILE GLY ILE ARG GLN ALA TRP GLN ALA ALA SEQRES 21 D 474 SER ALA ALA HIS ALA LEU SER ARG SER ASP GLU ALA ARG SEQRES 22 D 474 ASN SER ILE ARG VAL TRP GLN GLN GLU LEU ALA TRP ARG SEQRES 23 D 474 GLU PHE TYR GLN HIS ALA LEU TYR HIS PHE PRO SER LEU SEQRES 24 D 474 ALA ASP GLY PRO TYR ARG SER LEU TRP GLN GLN PHE PRO SEQRES 25 D 474 TRP GLU ASN ARG GLU ALA LEU PHE THR ALA TRP THR GLN SEQRES 26 D 474 ALA GLN THR GLY TYR PRO ILE VAL ASP ALA ALA MET ARG SEQRES 27 D 474 GLN LEU THR GLU THR GLY TRP MET HIS ASN ARG CYS ARG SEQRES 28 D 474 MET ILE VAL ALA SER PHE LEU THR LYS ASP LEU ILE ILE SEQRES 29 D 474 ASP TRP ARG ARG GLY GLU GLN PHE PHE MET GLN HIS LEU SEQRES 30 D 474 VAL ASP GLY ASP LEU ALA ALA ASN ASN GLY GLY TRP GLN SEQRES 31 D 474 TRP SER ALA SER SER GLY MET ASP PRO LYS PRO LEU ARG SEQRES 32 D 474 ILE PHE ASN PRO ALA SER GLN ALA LYS LYS PHE ASP ALA SEQRES 33 D 474 THR ALA THR TYR ILE LYS ARG TRP LEU PRO GLU LEU ARG SEQRES 34 D 474 HIS VAL HIS PRO LYS ASP LEU ILE SER GLY GLU ILE THR SEQRES 35 D 474 PRO ILE GLU ARG ARG GLY TYR PRO ALA PRO ILE VAL ASN SEQRES 36 D 474 HIS ASN LEU ARG GLN LYS GLN PHE LYS ALA LEU TYR ASN SEQRES 37 D 474 GLN LEU LYS ALA ALA ILE HET TCP I 12 18 HET C I 13 19 HET G I 14 22 HET C I 15 19 HET TCP K 12 18 HET C K 13 19 HET G K 14 22 HET C K 15 19 HET MG A9002 1 HET FAD A5485 53 HET HDF A5486 26 HET MG B9001 1 HET FAD B6485 53 HET HDF B6486 26 HET FAD C7485 53 HET HDF C7486 26 HET FAD D8485 53 HET HDF D8486 26 HETNAM TCP 5'-METHYLTHYMIDINE HETNAM C CYTIDINE-5'-MONOPHOSPHATE HETNAM G GUANOSINE-5'-MONOPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM HDF 8-HYDROXY-10-(D-RIBO-2,3,4,5-TETRAHYDROXYPENTYL)-5- HETNAM 2 HDF DEAZAISOALLOXAZINE FORMUL 13 TCP 2(C11 H16 N2 O5) FORMUL 14 C 4(C9 H14 N3 O8 P) FORMUL 15 G 2(C10 H14 N5 O8 P) FORMUL 21 MG 2(MG 2+) FORMUL 22 FAD 4(C27 H33 N9 O15 P2) FORMUL 23 HDF 4(C16 H17 N3 O7) FORMUL 31 HOH *1614(H2 O) HELIX 1 1 ILE A 19 GLN A 27 1 9 HELIX 2 2 PRO A 39 LEU A 42 1 4 HELIX 3 3 PRO A 49 ALA A 69 1 21 HELIX 4 4 PRO A 80 GLN A 90 1 11 HELIX 5 5 PRO A 104 THR A 119 1 16 HELIX 6 6 PRO A 135 GLN A 137 5 3 HELIX 7 7 TYR A 149 ALA A 158 1 10 HELIX 8 8 PRO A 176 LEU A 185 1 10 HELIX 9 9 GLU A 210 ASP A 222 1 13 HELIX 10 10 ALA A 224 ASN A 233 5 10 HELIX 11 11 SER A 244 LYS A 248 1 5 HELIX 12 12 ILE A 254 LEU A 267 1 14 HELIX 13 13 ASP A 271 HIS A 296 1 26 HELIX 14 14 PRO A 298 ASP A 302 5 5 HELIX 15 15 SER A 307 GLN A 310 1 4 HELIX 16 16 GLU A 318 THR A 325 1 8 HELIX 17 17 PRO A 332 THR A 344 1 13 HELIX 18 18 ASN A 349 LYS A 361 1 13 HELIX 19 19 TRP A 367 MET A 375 1 9 HELIX 20 20 LEU A 383 SER A 393 1 11 HELIX 21 21 PRO A 408 PHE A 415 1 8 HELIX 22 22 THR A 420 TRP A 425 1 6 HELIX 23 23 PRO A 427 LEU A 429 5 3 HELIX 24 24 PRO A 434 SER A 439 1 6 HELIX 25 25 PRO A 444 ARG A 447 1 4 HELIX 26 26 HIS A 457 ALA A 473 1 17 HELIX 27 27 ILE B 19 ARG B 25 1 7 HELIX 28 28 PRO B 39 LEU B 42 1 4 HELIX 29 29 PRO B 49 ALA B 69 1 21 HELIX 30 30 PRO B 80 LEU B 91 1 12 HELIX 31 31 PRO B 104 THR B 119 1 16 HELIX 32 32 PRO B 135 GLN B 137 5 3 HELIX 33 33 TYR B 149 ALA B 158 1 10 HELIX 34 34 PRO B 176 LEU B 185 1 10 HELIX 35 35 LEU B 193 LEU B 196 1 4 HELIX 36 36 GLU B 210 ASP B 222 1 13 HELIX 37 37 ALA B 224 ASN B 233 5 10 HELIX 38 38 SER B 244 LYS B 248 1 5 HELIX 39 39 ILE B 254 ALA B 266 1 13 HELIX 40 40 ASP B 271 HIS B 296 1 26 HELIX 41 41 PRO B 298 ASP B 302 5 5 HELIX 42 42 SER B 307 GLN B 311 1 5 HELIX 43 43 GLU B 318 THR B 325 1 8 HELIX 44 44 PRO B 332 THR B 344 1 13 HELIX 45 45 ASN B 349 LYS B 361 1 13 HELIX 46 46 TRP B 367 MET B 375 1 9 HELIX 47 47 LEU B 383 ALA B 394 1 12 HELIX 48 48 PRO B 408 PHE B 415 1 8 HELIX 49 49 THR B 420 TRP B 425 1 6 HELIX 50 50 PRO B 427 LEU B 429 5 3 HELIX 51 51 PRO B 434 SER B 439 1 6 HELIX 52 52 PRO B 444 ARG B 447 1 4 HELIX 53 53 HIS B 457 ALA B 473 1 17 HELIX 54 54 ILE C 19 ARG C 25 1 7 HELIX 55 55 PRO C 39 LEU C 42 1 4 HELIX 56 56 PRO C 49 ALA C 69 1 21 HELIX 57 57 PRO C 80 LEU C 91 1 12 HELIX 58 58 PRO C 104 THR C 119 1 16 HELIX 59 59 PRO C 135 GLN C 137 5 3 HELIX 60 60 TYR C 149 ALA C 158 1 10 HELIX 61 61 PRO C 176 LEU C 185 1 10 HELIX 62 62 LEU C 193 LEU C 196 1 4 HELIX 63 63 GLU C 210 ASP C 222 1 13 HELIX 64 64 ALA C 224 ASN C 233 5 10 HELIX 65 65 SER C 244 LYS C 248 1 5 HELIX 66 66 ILE C 254 ALA C 266 1 13 HELIX 67 67 ASP C 271 HIS C 296 1 26 HELIX 68 68 PRO C 298 ASP C 302 5 5 HELIX 69 69 SER C 307 GLN C 311 1 5 HELIX 70 70 GLU C 318 THR C 325 1 8 HELIX 71 71 PRO C 332 THR C 344 1 13 HELIX 72 72 ASN C 349 LYS C 361 1 13 HELIX 73 73 TRP C 367 MET C 375 1 9 HELIX 74 74 LEU C 383 ALA C 394 1 12 HELIX 75 75 PRO C 408 PHE C 415 1 8 HELIX 76 76 THR C 420 TRP C 425 1 6 HELIX 77 77 PRO C 427 LEU C 429 5 3 HELIX 78 78 PRO C 434 SER C 439 1 6 HELIX 79 79 HIS C 457 ALA C 473 1 17 HELIX 80 80 ILE D 19 ARG D 25 1 7 HELIX 81 81 PRO D 39 LEU D 42 1 4 HELIX 82 82 PRO D 49 ALA D 69 1 21 HELIX 83 83 PRO D 80 GLN D 90 1 11 HELIX 84 84 PRO D 104 THR D 119 1 16 HELIX 85 85 PRO D 135 GLN D 137 5 3 HELIX 86 86 TYR D 149 ALA D 158 1 10 HELIX 87 87 PRO D 176 LEU D 185 1 10 HELIX 88 88 GLU D 210 ASP D 222 1 13 HELIX 89 89 ALA D 224 ASN D 233 5 10 HELIX 90 90 SER D 244 LYS D 248 1 5 HELIX 91 91 ILE D 254 ALA D 266 1 13 HELIX 92 92 ASP D 271 HIS D 296 1 26 HELIX 93 93 PRO D 298 ASP D 302 5 5 HELIX 94 94 GLU D 318 THR D 325 1 8 HELIX 95 95 PRO D 332 THR D 344 1 13 HELIX 96 96 ASN D 349 LYS D 361 1 13 HELIX 97 97 TRP D 367 MET D 375 1 9 HELIX 98 98 LEU D 383 ALA D 394 1 12 HELIX 99 99 PRO D 408 PHE D 415 1 8 HELIX 100 100 THR D 420 TRP D 425 1 6 HELIX 101 101 PRO D 427 LEU D 429 5 3 HELIX 102 102 PRO D 434 SER D 439 1 6 HELIX 103 103 PRO D 444 ARG D 447 1 4 HELIX 104 104 HIS D 457 ALA D 473 1 17 SHEET 1 A 5 ARG A 123 LEU A 127 0 SHEET 2 A 5 ALA A 95 ASN A 99 1 N VAL A 96 O ARG A 123 SHEET 3 A 5 ILE A 5 HIS A 9 1 N LEU A 6 O ALA A 95 SHEET 4 A 5 LEU A 31 LEU A 37 1 N ILE A 32 O ILE A 5 SHEET 5 A 5 LEU A 73 GLN A 77 1 N LEU A 74 O GLY A 33 SHEET 1 B 5 ARG B 123 LEU B 127 0 SHEET 2 B 5 ALA B 95 ASN B 99 1 N VAL B 96 O ARG B 123 SHEET 3 B 5 ILE B 5 HIS B 9 1 N LEU B 6 O ALA B 95 SHEET 4 B 5 LEU B 31 LEU B 37 1 N ILE B 32 O ILE B 5 SHEET 5 B 5 LEU B 73 GLN B 77 1 N LEU B 74 O GLY B 33 SHEET 1 C 5 ARG C 123 LEU C 127 0 SHEET 2 C 5 ALA C 95 ASN C 99 1 N VAL C 96 O ARG C 123 SHEET 3 C 5 ILE C 5 HIS C 9 1 N LEU C 6 O ALA C 95 SHEET 4 C 5 LEU C 31 LEU C 37 1 N ILE C 32 O ILE C 5 SHEET 5 C 5 LEU C 73 GLN C 77 1 N LEU C 74 O GLY C 33 SHEET 1 D 5 ARG D 123 LEU D 127 0 SHEET 2 D 5 ALA D 95 ASN D 99 1 N VAL D 96 O ARG D 123 SHEET 3 D 5 ILE D 5 HIS D 9 1 N LEU D 6 O ALA D 95 SHEET 4 D 5 LEU D 31 LEU D 37 1 N ILE D 32 O ILE D 5 SHEET 5 D 5 LEU D 73 GLN D 77 1 N LEU D 74 O GLY D 33 LINK O3' DT I 7 CP TCP I 12 1555 1555 1.41 LINK O3' DT K 7 CP TCP K 12 1555 1555 1.42 LINK OP1 DC J 12 MG MG A9002 1555 1555 1.91 LINK O HOH J1610 MG MG A9002 1555 1555 2.15 LINK O HOH J1611 MG MG A9002 1555 1555 2.04 LINK OP1 DC L 12 MG MG B9001 1555 1555 1.87 LINK O HOH L1609 MG MG B9001 1555 1555 2.17 LINK OD2 ASP A 399 MG MG A9002 1555 1555 2.14 LINK MG MG A9002 O HOH A9410 1555 1555 2.05 LINK MG MG A9002 O HOH A9411 1555 1555 2.02 LINK OD1 ASP B 399 MG MG B9001 1555 1555 2.19 LINK MG MG B9001 O HOH B9305 1555 1555 2.38 LINK MG MG B9001 O HOH B9405 1555 1555 2.06 CISPEP 1 ASP A 229 PRO A 230 0 0.74 CISPEP 2 ASP B 229 PRO B 230 0 0.57 CISPEP 3 ASP C 229 PRO C 230 0 0.43 CISPEP 4 ASP D 229 PRO D 230 0 0.66 SITE 1 AC1 5 ASP B 399 HOH B9305 HOH B9405 DC L 12 SITE 2 AC1 5 HOH L1609 SITE 1 AC2 6 ASP A 399 HOH A9410 HOH A9411 DC J 12 SITE 2 AC2 6 HOH J1610 HOH J1611 SITE 1 AC3 7 ARG A 350 GLN A 411 TCP I 12 G I 14 SITE 2 AC3 7 HOH I1450 DG J 7 DA J 8 SITE 1 AC4 8 ILE A 405 PHE A 406 ASN A 407 GLN A 411 SITE 2 AC4 8 C I 13 C I 15 DC J 6 DG J 7 SITE 1 AC5 3 ASN A 407 GLN A 461 G I 14 SITE 1 AC6 8 ARG B 350 PHE B 406 GLN B 411 TCP K 12 SITE 2 AC6 8 G K 14 HOH K1407 DG L 7 DA L 8 SITE 1 AC7 9 ILE B 405 PHE B 406 ASN B 407 GLN B 411 SITE 2 AC7 9 LYS B 414 C K 13 C K 15 DC L 6 SITE 3 AC7 9 DG L 7 SITE 1 AC8 3 ASN B 407 GLN B 461 G K 14 SITE 1 AC9 30 TYR A 228 THR A 240 SER A 241 GLY A 242 SITE 2 AC9 30 LEU A 243 SER A 244 LEU A 247 TRP A 280 SITE 3 AC9 30 GLU A 283 ARG A 287 TYR A 290 TRP A 346 SITE 4 AC9 30 ASN A 349 ARG A 352 LEU A 378 ASP A 380 SITE 5 AC9 30 GLY A 381 ASP A 382 ALA A 385 ASN A 386 SITE 6 AC9 30 GLY A 389 TRP A 390 HOH A9011 HOH A9013 SITE 7 AC9 30 HOH A9021 HOH A9022 HOH A9023 HOH A9024 SITE 8 AC9 30 DT I 7 TCP I 12 SITE 1 BC1 19 ARG A 10 PHE A 35 CYS A 36 LEU A 37 SITE 2 BC1 19 ASP A 38 ILE A 41 LEU A 42 MET A 47 SITE 3 BC1 19 ARG A 51 LEU A 55 ASP A 101 GLU A 103 SITE 4 BC1 19 GLY A 106 ARG A 109 LYS A 248 PHE A 249 SITE 5 BC1 19 HOH A9003 HOH A9102 HOH A9112 SITE 1 BC2 30 TYR B 228 THR B 240 SER B 241 GLY B 242 SITE 2 BC2 30 LEU B 243 SER B 244 LEU B 247 TRP B 280 SITE 3 BC2 30 GLU B 283 ARG B 287 TYR B 290 TRP B 346 SITE 4 BC2 30 ASN B 349 ARG B 352 LEU B 378 ASP B 380 SITE 5 BC2 30 GLY B 381 ASP B 382 ALA B 385 ASN B 386 SITE 6 BC2 30 GLY B 389 TRP B 390 HOH B9010 HOH B9012 SITE 7 BC2 30 HOH B9020 HOH B9021 HOH B9022 HOH B9023 SITE 8 BC2 30 DT K 7 TCP K 12 SITE 1 BC3 19 ARG B 10 PHE B 35 CYS B 36 LEU B 37 SITE 2 BC3 19 ASP B 38 ILE B 41 LEU B 42 MET B 47 SITE 3 BC3 19 ARG B 51 LEU B 55 ASP B 101 GLU B 103 SITE 4 BC3 19 GLY B 106 ARG B 109 LYS B 248 PHE B 249 SITE 5 BC3 19 HOH B9002 HOH B9102 HOH B9112 SITE 1 BC4 29 TYR C 228 THR C 240 SER C 241 GLY C 242 SITE 2 BC4 29 LEU C 243 SER C 244 LEU C 247 TRP C 280 SITE 3 BC4 29 GLU C 283 ARG C 287 TYR C 290 TRP C 346 SITE 4 BC4 29 ASN C 349 ARG C 352 LEU C 378 ASP C 380 SITE 5 BC4 29 GLY C 381 ASP C 382 ALA C 385 ASN C 386 SITE 6 BC4 29 GLY C 389 TRP C 390 HOH C7496 HOH C7498 SITE 7 BC4 29 HOH C7506 HOH C7508 HOH C7509 HOH C7510 SITE 8 BC4 29 HOH C7836 SITE 1 BC5 19 ARG C 10 PHE C 35 CYS C 36 LEU C 37 SITE 2 BC5 19 ASP C 38 ILE C 41 LEU C 42 MET C 47 SITE 3 BC5 19 ARG C 51 LEU C 55 ASP C 101 GLU C 103 SITE 4 BC5 19 GLY C 106 ARG C 109 LYS C 248 PHE C 249 SITE 5 BC5 19 HOH C7488 HOH C7589 HOH C7599 SITE 1 BC6 29 TYR D 228 THR D 240 SER D 241 GLY D 242 SITE 2 BC6 29 LEU D 243 SER D 244 LEU D 247 TRP D 280 SITE 3 BC6 29 GLU D 283 ARG D 287 TYR D 290 TRP D 346 SITE 4 BC6 29 MET D 347 ASN D 349 ARG D 352 LEU D 378 SITE 5 BC6 29 ASP D 380 GLY D 381 ASP D 382 ALA D 385 SITE 6 BC6 29 ASN D 386 GLY D 389 TRP D 390 HOH D8496 SITE 7 BC6 29 HOH D8498 HOH D8506 HOH D8508 HOH D8509 SITE 8 BC6 29 HOH D8510 SITE 1 BC7 19 ARG D 10 PHE D 35 CYS D 36 LEU D 37 SITE 2 BC7 19 ASP D 38 ILE D 41 LEU D 42 MET D 47 SITE 3 BC7 19 ARG D 51 LEU D 55 ASP D 101 GLU D 103 SITE 4 BC7 19 GLY D 106 ARG D 109 LYS D 248 PHE D 249 SITE 5 BC7 19 HOH D8488 HOH D8588 HOH D8598 CRYST1 173.815 88.505 161.622 90.00 90.11 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005753 0.000000 0.000011 0.00000 SCALE2 0.000000 0.011299 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006187 0.00000 MTRIX1 1 -0.981200 -0.166900 -0.096800 168.70441 1 MTRIX2 1 -0.173000 0.983200 0.058400 12.11570 1 MTRIX3 1 0.085400 0.074100 -0.993600 69.59880 1 MTRIX1 2 -0.980200 0.174000 -0.094500 168.66400 1 MTRIX2 2 0.167300 0.983100 0.074800 -2.38930 1 MTRIX3 2 0.105900 0.057500 -0.992700 83.74140 1 MTRIX1 3 -0.980200 -0.170400 -0.100500 81.91030 1 MTRIX2 3 0.176800 -0.982600 -0.057700 -0.94820 1 MTRIX3 3 -0.088900 -0.074400 0.993300 11.40410 1 MTRIX1 4 1.000000 0.003200 -0.005400 87.13240 1 MTRIX2 4 0.003200 -1.000000 0.000800 11.23150 1 MTRIX3 4 -0.005300 -0.000800 -1.000000 81.04130 1