data_1TM6 # _entry.id 1TM6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1TM6 pdb_00001tm6 10.2210/pdb1tm6/pdb RCSB RCSB022764 ? ? WWPDB D_1000022764 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1TM6 _pdbx_database_status.recvd_initial_deposition_date 2004-06-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Matousek, W.M.' 1 'Alexandrescu, A.T.' 2 # _citation.id primary _citation.title 'NMR structure of the C-terminal domain of SecA in the free state' _citation.journal_abbrev Biochim.Biophys.Acta _citation.journal_volume 1702 _citation.page_first 163 _citation.page_last 171 _citation.year 2004 _citation.journal_id_ASTM BBACAQ _citation.country NE _citation.journal_id_ISSN 0006-3002 _citation.journal_id_CSD 0113 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15488768 _citation.pdbx_database_id_DOI 10.1016/j.bbapap.2004.08.012 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Matousek, W.M.' 1 ? primary 'Alexandrescu, A.T.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Preprotein translocase secA subunit' 2438.812 1 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GRNDPCPCGSGKKYKQCHGRLQ _entity_poly.pdbx_seq_one_letter_code_can GRNDPCPCGSGKKYKQCHGRLQ _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ARG n 1 3 ASN n 1 4 ASP n 1 5 PRO n 1 6 CYS n 1 7 PRO n 1 8 CYS n 1 9 GLY n 1 10 SER n 1 11 GLY n 1 12 LYS n 1 13 LYS n 1 14 TYR n 1 15 LYS n 1 16 GLN n 1 17 CYS n 1 18 HIS n 1 19 GLY n 1 20 ARG n 1 21 LEU n 1 22 GLN n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Escherichia coli' _entity_src_nat.pdbx_ncbi_taxonomy_id 562 _entity_src_nat.genus Escherichia _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SECA_ECOLI _struct_ref.pdbx_db_accession P10408 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code GRNDPCPCGSGKKYKQCHGRLQ _struct_ref.pdbx_align_begin 880 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1TM6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 22 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P10408 _struct_ref_seq.db_align_beg 880 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 901 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 22 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '2D TOCSY' 2 1 1 '2D NOESY' 3 1 2 'Natural Abundance N-HSQC' 4 3 4 'Natural Abundance C-HSQC' 5 2 3 'Hydrogen Exchange' 6 3 4 '2D NOESY' 7 3 4 E-COSY # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 298 1 7.40 '2.7mM ZnCl; 10mM PO4 buffer' atm K 2 298 1 6.03 '2.7mM ZnCl; 10mM PO4 buffer' atm K 3 298 1 6.14 '1.6mM ZnCl; 10mM PO4 buffer' atm K 4 298 1 6.43 '2.7mM ZnCl; 10mM PO4 buffer' atm K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '2.5mM protein, 2.7mM ZnCl, 10mM PO4 buffer' '10% D2O; 90% H2O' 2 '1.4mM protein, 1.6mM ZnCl, 10mM PO4 buffer' '99.96% D2O' 3 '2.5mM protein, 2.7mM ZnCl, 10mM PO4 buffer' '99% D20; 1% H20' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Varian INOVA 500 2 ? Varian INOVA 500 3 ? Varian INOVA 500 4 ? Varian INOVA 500 # _pdbx_nmr_refine.entry_id 1TM6 _pdbx_nmr_refine.method ;standard x-plor protocol; 1. distance geometry sub-embed 2. distance geometry full embed 3. simulated annealing 4. simulated annealing refine ; _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1TM6 _pdbx_nmr_ensemble.conformers_calculated_total_number 500 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria ;structures with acceptable covalent geometry,structures with favorable non-bond energy,structures with the least restraint violations,structures with the lowest energy,target function ; _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1TM6 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average,fewest violations,lowest energy' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal Felix 2000 'data analysis' ? 1 X-PLOR 3.851 refinement ? 2 # _exptl.entry_id 1TM6 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1TM6 _struct.title 'NMR Structure of the Free Zinc Binding C-terminal Domain of SecA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1TM6 _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' _struct_keywords.text 'Zinc finger, beta hairpin, SecA, PROTEIN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id LYS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 12 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id HIS _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 18 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id LYS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 12 _struct_conf.end_auth_comp_id HIS _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 18 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 6 SG ? ? ? 1_555 B ZN . ZN ? B A CYS 6 A ZN 23 1_555 ? ? ? ? ? ? ? 2.347 ? ? metalc2 metalc ? ? A CYS 8 SG ? ? ? 1_555 B ZN . ZN ? B A CYS 8 A ZN 23 1_555 ? ? ? ? ? ? ? 2.295 ? ? metalc3 metalc ? ? A CYS 17 SG ? ? ? 1_555 B ZN . ZN ? B A CYS 17 A ZN 23 1_555 ? ? ? ? ? ? ? 2.389 ? ? metalc4 metalc ? ? A HIS 18 ND1 ? ? ? 1_555 B ZN . ZN ? B A HIS 18 A ZN 23 1_555 ? ? ? ? ? ? ? 2.421 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id ZN _struct_site.pdbx_auth_seq_id 23 _struct_site.pdbx_auth_ins_code B _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE ZN A 23B' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 CYS A 6 ? CYS A 6 . ? 1_555 ? 2 AC1 5 PRO A 7 ? PRO A 7 . ? 1_555 ? 3 AC1 5 CYS A 8 ? CYS A 8 . ? 1_555 ? 4 AC1 5 CYS A 17 ? CYS A 17 . ? 1_555 ? 5 AC1 5 HIS A 18 ? HIS A 18 . ? 1_555 ? # _database_PDB_matrix.entry_id 1TM6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1TM6 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 ASN 3 3 3 ASN ASN A . n A 1 4 ASP 4 4 4 ASP ASP A . n A 1 5 PRO 5 5 5 PRO PRO A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 CYS 8 8 8 CYS CYS A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 TYR 14 14 14 TYR TYR A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 GLN 16 16 16 GLN GLN A . n A 1 17 CYS 17 17 17 CYS CYS A . n A 1 18 HIS 18 18 18 HIS HIS A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 GLN 22 22 22 GLN GLN A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id ZN _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 23 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id ZN _pdbx_nonpoly_scheme.auth_mon_id ZN2 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code B # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 6 ? A CYS 6 ? 1_555 ZN ? B ZN . ? A ZN 23 B 1_555 SG ? A CYS 8 ? A CYS 8 ? 1_555 85.1 ? 2 SG ? A CYS 6 ? A CYS 6 ? 1_555 ZN ? B ZN . ? A ZN 23 B 1_555 SG ? A CYS 17 ? A CYS 17 ? 1_555 161.1 ? 3 SG ? A CYS 8 ? A CYS 8 ? 1_555 ZN ? B ZN . ? A ZN 23 B 1_555 SG ? A CYS 17 ? A CYS 17 ? 1_555 106.1 ? 4 SG ? A CYS 6 ? A CYS 6 ? 1_555 ZN ? B ZN . ? A ZN 23 B 1_555 ND1 ? A HIS 18 ? A HIS 18 ? 1_555 89.5 ? 5 SG ? A CYS 8 ? A CYS 8 ? 1_555 ZN ? B ZN . ? A ZN 23 B 1_555 ND1 ? A HIS 18 ? A HIS 18 ? 1_555 174.5 ? 6 SG ? A CYS 17 ? A CYS 17 ? 1_555 ZN ? B ZN . ? A ZN 23 B 1_555 ND1 ? A HIS 18 ? A HIS 18 ? 1_555 79.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-10-12 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.value' 15 4 'Structure model' '_struct_conn.pdbx_dist_value' 16 4 'Structure model' '_struct_conn.pdbx_ptnr1_PDB_ins_code' 17 4 'Structure model' '_struct_conn.pdbx_ptnr2_PDB_ins_code' 18 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 30 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 4 'Structure model' '_struct_site.pdbx_auth_ins_code' 33 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A GLY 11 ? ? H A LYS 13 ? ? 1.53 2 2 HD2 A HIS 18 ? ? ZN A ZN 23 B ? 1.56 3 6 O A GLY 11 ? ? H A LYS 13 ? ? 1.53 4 7 O A GLY 11 ? ? H A LYS 13 ? ? 1.52 5 7 OD2 A ASP 4 ? ? H A TYR 14 ? ? 1.60 6 8 O A GLY 11 ? ? H A LYS 13 ? ? 1.54 7 10 O A LYS 13 ? ? H A CYS 17 ? ? 1.58 8 12 O A GLY 11 ? ? H A LYS 13 ? ? 1.54 9 12 OD2 A ASP 4 ? ? H A TYR 14 ? ? 1.59 10 15 O A GLY 11 ? ? H A LYS 13 ? ? 1.53 11 16 H A ASN 3 ? ? O A GLY 11 ? ? 1.57 12 17 O A GLY 11 ? ? H A LYS 13 ? ? 1.51 13 18 O A LYS 15 ? ? H A ARG 20 ? ? 1.51 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 4 ? ? -110.81 68.74 2 1 PRO A 5 ? ? -61.49 -107.02 3 1 CYS A 6 ? ? 33.53 -149.10 4 1 SER A 10 ? ? -167.08 -126.61 5 1 LYS A 12 ? ? 65.17 -58.37 6 1 LYS A 13 ? ? -31.94 -72.45 7 1 CYS A 17 ? ? -95.89 -65.60 8 2 ASP A 4 ? ? -115.36 58.95 9 2 PRO A 5 ? ? -63.27 -109.38 10 2 CYS A 6 ? ? 30.78 -144.25 11 2 SER A 10 ? ? -170.43 -135.40 12 2 LYS A 12 ? ? 67.48 -64.09 13 2 LYS A 13 ? ? -33.66 -32.50 14 2 CYS A 17 ? ? -98.36 -63.89 15 3 ARG A 2 ? ? 42.96 -164.46 16 3 ASP A 4 ? ? -113.67 57.33 17 3 PRO A 5 ? ? -63.58 -111.57 18 3 CYS A 6 ? ? 33.12 -149.29 19 3 SER A 10 ? ? -172.73 -138.43 20 3 LYS A 12 ? ? -157.85 -35.01 21 3 LYS A 13 ? ? -39.99 -73.39 22 3 CYS A 17 ? ? -95.83 -69.73 23 3 ARG A 20 ? ? -148.10 -35.18 24 3 LEU A 21 ? ? 57.56 84.64 25 4 ARG A 2 ? ? 174.89 25.26 26 4 ASN A 3 ? ? -96.16 37.10 27 4 ASP A 4 ? ? -108.58 64.71 28 4 PRO A 5 ? ? -60.72 -109.41 29 4 CYS A 6 ? ? 35.19 -151.39 30 4 SER A 10 ? ? -164.93 -134.24 31 4 CYS A 17 ? ? -104.67 -68.79 32 4 ARG A 20 ? ? -51.80 -94.82 33 4 LEU A 21 ? ? -47.97 97.73 34 5 ASP A 4 ? ? -116.18 70.32 35 5 PRO A 5 ? ? -60.75 -109.28 36 5 CYS A 6 ? ? 34.48 -150.89 37 5 SER A 10 ? ? -176.20 -124.69 38 5 LYS A 12 ? ? 78.38 -70.70 39 5 LYS A 13 ? ? -18.29 -60.30 40 5 CYS A 17 ? ? -97.16 -67.14 41 5 ARG A 20 ? ? -64.83 -94.22 42 5 LEU A 21 ? ? -158.30 52.63 43 6 ARG A 2 ? ? -88.31 -102.13 44 6 ASP A 4 ? ? -109.39 68.05 45 6 PRO A 5 ? ? -60.76 -111.18 46 6 CYS A 6 ? ? 34.46 -149.46 47 6 SER A 10 ? ? -174.98 -127.05 48 6 LYS A 12 ? ? 64.89 -59.41 49 6 LYS A 13 ? ? -28.20 -67.54 50 6 CYS A 17 ? ? -104.35 -63.97 51 6 ARG A 20 ? ? 57.21 104.10 52 7 ARG A 2 ? ? -85.11 -98.08 53 7 ASP A 4 ? ? -109.68 69.56 54 7 PRO A 5 ? ? -64.98 -110.72 55 7 CYS A 6 ? ? 33.93 -149.51 56 7 SER A 10 ? ? -169.91 -134.19 57 7 LYS A 12 ? ? 64.88 -57.41 58 7 LYS A 13 ? ? -29.74 -57.52 59 7 CYS A 17 ? ? -95.15 -69.47 60 7 ARG A 20 ? ? -69.98 -141.91 61 7 LEU A 21 ? ? -66.76 70.32 62 8 ARG A 2 ? ? -136.95 -77.17 63 8 ASP A 4 ? ? -108.42 69.10 64 8 PRO A 5 ? ? -63.76 -112.40 65 8 CYS A 6 ? ? 33.86 -149.51 66 8 SER A 10 ? ? -176.47 -130.47 67 8 LYS A 12 ? ? 65.73 -56.96 68 8 LYS A 13 ? ? -26.91 -56.57 69 8 CYS A 17 ? ? -104.39 -68.67 70 8 ARG A 20 ? ? 24.23 87.68 71 8 LEU A 21 ? ? -54.37 87.65 72 9 ARG A 2 ? ? -159.04 74.81 73 9 ASP A 4 ? ? -108.39 66.80 74 9 PRO A 5 ? ? -64.85 -107.94 75 9 CYS A 6 ? ? 34.23 -150.68 76 9 SER A 10 ? ? -172.75 -133.01 77 9 LYS A 12 ? ? 66.44 -64.30 78 9 LYS A 13 ? ? -16.37 -72.55 79 9 CYS A 17 ? ? -99.07 -65.01 80 9 ARG A 20 ? ? -112.23 -162.89 81 9 LEU A 21 ? ? -141.10 43.47 82 10 ARG A 2 ? ? -92.96 -139.20 83 10 ASN A 3 ? ? -109.53 -144.96 84 10 ASP A 4 ? ? -112.21 57.63 85 10 PRO A 5 ? ? -63.37 -108.22 86 10 CYS A 6 ? ? 33.52 -149.76 87 10 SER A 10 ? ? -176.92 -131.89 88 10 LYS A 12 ? ? 78.71 -44.31 89 10 LYS A 13 ? ? -41.46 -76.50 90 11 ARG A 2 ? ? -107.06 -160.89 91 11 ASP A 4 ? ? -113.45 60.87 92 11 PRO A 5 ? ? -64.86 -109.79 93 11 CYS A 6 ? ? 32.75 -149.31 94 11 SER A 10 ? ? -176.24 -131.81 95 11 LYS A 13 ? ? -32.66 -78.18 96 11 CYS A 17 ? ? -98.33 -65.76 97 12 ASN A 3 ? ? -152.28 66.08 98 12 ASP A 4 ? ? -109.94 70.96 99 12 PRO A 5 ? ? -60.50 -108.30 100 12 CYS A 6 ? ? 34.48 -151.06 101 12 SER A 10 ? ? -171.16 -126.31 102 12 LYS A 12 ? ? 66.06 -60.01 103 12 LYS A 13 ? ? -23.53 -56.67 104 12 CYS A 17 ? ? -102.60 -63.84 105 12 ARG A 20 ? ? 176.47 156.12 106 13 ASP A 4 ? ? -111.53 61.63 107 13 PRO A 5 ? ? -64.56 -112.45 108 13 CYS A 6 ? ? 30.72 -146.30 109 13 SER A 10 ? ? -172.17 -130.12 110 13 CYS A 17 ? ? -94.54 -66.48 111 13 ARG A 20 ? ? 65.28 -176.55 112 13 LEU A 21 ? ? -93.42 33.91 113 14 ARG A 2 ? ? -99.58 50.56 114 14 ASP A 4 ? ? -110.00 68.82 115 14 PRO A 5 ? ? -64.78 -108.43 116 14 CYS A 6 ? ? 34.83 -149.20 117 14 SER A 10 ? ? -170.72 -126.55 118 14 LYS A 13 ? ? -40.30 -79.59 119 14 LEU A 21 ? ? -103.64 52.41 120 15 ARG A 2 ? ? 178.04 146.91 121 15 ASN A 3 ? ? -158.50 59.75 122 15 ASP A 4 ? ? -111.40 69.47 123 15 PRO A 5 ? ? -66.03 -115.77 124 15 CYS A 6 ? ? 33.29 -147.69 125 15 SER A 10 ? ? -166.95 -135.16 126 15 LYS A 12 ? ? 64.81 -56.83 127 15 LYS A 13 ? ? -28.64 -56.65 128 15 CYS A 17 ? ? -95.43 -71.74 129 15 ARG A 20 ? ? -143.50 -135.48 130 16 ASN A 3 ? ? -154.16 71.91 131 16 ASP A 4 ? ? -107.81 68.04 132 16 PRO A 5 ? ? -63.31 -112.23 133 16 CYS A 6 ? ? 34.59 -150.15 134 16 SER A 10 ? ? -173.82 -121.68 135 16 LYS A 13 ? ? -29.05 -50.53 136 16 CYS A 17 ? ? -105.09 -68.59 137 16 LEU A 21 ? ? -110.95 77.54 138 17 ARG A 2 ? ? -136.58 -125.88 139 17 ASN A 3 ? ? 33.00 87.89 140 17 ASP A 4 ? ? -112.76 67.19 141 17 PRO A 5 ? ? -61.43 -109.70 142 17 CYS A 6 ? ? 34.81 -150.75 143 17 SER A 10 ? ? -167.12 -133.87 144 17 LYS A 12 ? ? 63.40 -59.08 145 17 LYS A 13 ? ? -23.84 -72.95 146 17 CYS A 17 ? ? -103.03 -65.94 147 17 LEU A 21 ? ? -109.10 57.28 148 18 ARG A 2 ? ? 59.53 17.78 149 18 ASP A 4 ? ? -108.97 68.24 150 18 PRO A 5 ? ? -62.03 -106.87 151 18 CYS A 6 ? ? 34.51 -151.67 152 18 SER A 10 ? ? -168.11 -130.53 153 18 LYS A 12 ? ? 67.78 -13.74 154 18 CYS A 17 ? ? -95.35 -64.53 155 19 ARG A 2 ? ? 58.57 172.98 156 19 ASP A 4 ? ? -109.71 65.79 157 19 PRO A 5 ? ? -62.04 -110.47 158 19 CYS A 6 ? ? 34.63 -150.25 159 19 SER A 10 ? ? -178.25 -131.28 160 19 LYS A 12 ? ? 71.47 -64.86 161 19 LYS A 13 ? ? -15.62 -76.57 162 19 CYS A 17 ? ? -99.08 -71.14 163 19 ARG A 20 ? ? 68.76 167.70 164 19 LEU A 21 ? ? -144.05 43.81 165 20 ASP A 4 ? ? -110.78 69.45 166 20 PRO A 5 ? ? -61.42 -109.27 167 20 CYS A 6 ? ? 34.13 -150.44 168 20 SER A 10 ? ? -169.73 -129.83 169 20 LYS A 13 ? ? -30.26 -70.86 170 20 CYS A 17 ? ? -101.71 -64.83 171 20 ARG A 20 ? ? -113.83 64.77 172 20 LEU A 21 ? ? -101.07 55.91 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 2 ? ? 0.283 'SIDE CHAIN' 2 2 ARG A 2 ? ? 0.251 'SIDE CHAIN' 3 2 ARG A 20 ? ? 0.277 'SIDE CHAIN' 4 3 ARG A 2 ? ? 0.195 'SIDE CHAIN' 5 3 ARG A 20 ? ? 0.207 'SIDE CHAIN' 6 4 ARG A 2 ? ? 0.273 'SIDE CHAIN' 7 4 ARG A 20 ? ? 0.237 'SIDE CHAIN' 8 5 ARG A 2 ? ? 0.296 'SIDE CHAIN' 9 5 ARG A 20 ? ? 0.222 'SIDE CHAIN' 10 6 ARG A 20 ? ? 0.318 'SIDE CHAIN' 11 7 ARG A 2 ? ? 0.217 'SIDE CHAIN' 12 7 ARG A 20 ? ? 0.310 'SIDE CHAIN' 13 8 ARG A 2 ? ? 0.271 'SIDE CHAIN' 14 8 ARG A 20 ? ? 0.205 'SIDE CHAIN' 15 9 ARG A 2 ? ? 0.183 'SIDE CHAIN' 16 9 ARG A 20 ? ? 0.301 'SIDE CHAIN' 17 10 ARG A 2 ? ? 0.295 'SIDE CHAIN' 18 10 ARG A 20 ? ? 0.317 'SIDE CHAIN' 19 11 ARG A 2 ? ? 0.310 'SIDE CHAIN' 20 11 ARG A 20 ? ? 0.316 'SIDE CHAIN' 21 12 ARG A 2 ? ? 0.203 'SIDE CHAIN' 22 12 ARG A 20 ? ? 0.282 'SIDE CHAIN' 23 13 ARG A 2 ? ? 0.295 'SIDE CHAIN' 24 13 ARG A 20 ? ? 0.262 'SIDE CHAIN' 25 14 ARG A 2 ? ? 0.245 'SIDE CHAIN' 26 14 ARG A 20 ? ? 0.200 'SIDE CHAIN' 27 15 ARG A 2 ? ? 0.245 'SIDE CHAIN' 28 15 ARG A 20 ? ? 0.270 'SIDE CHAIN' 29 16 ARG A 2 ? ? 0.258 'SIDE CHAIN' 30 16 ARG A 20 ? ? 0.156 'SIDE CHAIN' 31 17 ARG A 2 ? ? 0.303 'SIDE CHAIN' 32 17 ARG A 20 ? ? 0.313 'SIDE CHAIN' 33 18 ARG A 2 ? ? 0.213 'SIDE CHAIN' 34 18 ARG A 20 ? ? 0.189 'SIDE CHAIN' 35 19 ARG A 20 ? ? 0.310 'SIDE CHAIN' 36 20 ARG A 2 ? ? 0.251 'SIDE CHAIN' 37 20 ARG A 20 ? ? 0.309 'SIDE CHAIN' # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN #