data_1TM8 # _entry.id 1TM8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1TM8 RCSB RCSB022766 WWPDB D_1000022766 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2005-02-08 _pdbx_database_PDB_obs_spr.pdb_id 1YMG _pdbx_database_PDB_obs_spr.replace_pdb_id 1TM8 _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1SOR _pdbx_database_related.details 'AQP0 Sheep, electron diffraction' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 1TM8 _pdbx_database_status.recvd_initial_deposition_date 2004-06-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Harries, W.E.C.' 1 'Akhavan, D.' 2 'Miercke, L.J.W.' 3 'Khademi, S.' 4 'Stroud, R.M.' 5 # _citation.id primary _citation.title 'The channel architecture of aquaporin 0 at a 2.2-A resolution' _citation.journal_abbrev Proc.Natl.Acad.Sci.Usa _citation.journal_volume 101 _citation.page_first 14045 _citation.page_last 14050 _citation.year 2004 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 1091-6490 _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15377788 _citation.pdbx_database_id_DOI 10.1073/pnas.0405274101 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Harries, W.E.C.' 1 primary 'Akhavan, D.' 2 primary 'Miercke, L.J.W.' 3 primary 'Khademi, S.' 4 primary 'Stroud, R.M.' 5 # _cell.entry_id 1TM8 _cell.length_a 110.531 _cell.length_b 110.531 _cell.length_c 53.390 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1TM8 _symmetry.space_group_name_H-M 'P 4 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Lens fiber major intrinsic protein' 24990.252 1 ? ? ? ? 2 non-polymer man B-NONYLGLUCOSIDE 306.395 2 ? ? ? ? 3 water nat water 18.015 182 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'MIP26, MP26' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLR AICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVG FSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKG ; _entity_poly.pdbx_seq_one_letter_code_can ;SASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLR AICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVG FSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ALA n 1 3 SER n 1 4 PHE n 1 5 TRP n 1 6 ARG n 1 7 ALA n 1 8 ILE n 1 9 CYS n 1 10 ALA n 1 11 GLU n 1 12 PHE n 1 13 PHE n 1 14 ALA n 1 15 SER n 1 16 LEU n 1 17 PHE n 1 18 TYR n 1 19 VAL n 1 20 PHE n 1 21 PHE n 1 22 GLY n 1 23 LEU n 1 24 GLY n 1 25 ALA n 1 26 SER n 1 27 LEU n 1 28 ARG n 1 29 TRP n 1 30 ALA n 1 31 PRO n 1 32 GLY n 1 33 PRO n 1 34 LEU n 1 35 HIS n 1 36 VAL n 1 37 LEU n 1 38 GLN n 1 39 VAL n 1 40 ALA n 1 41 LEU n 1 42 ALA n 1 43 PHE n 1 44 GLY n 1 45 LEU n 1 46 ALA n 1 47 LEU n 1 48 ALA n 1 49 THR n 1 50 LEU n 1 51 VAL n 1 52 GLN n 1 53 ALA n 1 54 VAL n 1 55 GLY n 1 56 HIS n 1 57 ILE n 1 58 SER n 1 59 GLY n 1 60 ALA n 1 61 HIS n 1 62 VAL n 1 63 ASN n 1 64 PRO n 1 65 ALA n 1 66 VAL n 1 67 THR n 1 68 PHE n 1 69 ALA n 1 70 PHE n 1 71 LEU n 1 72 VAL n 1 73 GLY n 1 74 SER n 1 75 GLN n 1 76 MET n 1 77 SER n 1 78 LEU n 1 79 LEU n 1 80 ARG n 1 81 ALA n 1 82 ILE n 1 83 CYS n 1 84 TYR n 1 85 MET n 1 86 VAL n 1 87 ALA n 1 88 GLN n 1 89 LEU n 1 90 LEU n 1 91 GLY n 1 92 ALA n 1 93 VAL n 1 94 ALA n 1 95 GLY n 1 96 ALA n 1 97 ALA n 1 98 VAL n 1 99 LEU n 1 100 TYR n 1 101 SER n 1 102 VAL n 1 103 THR n 1 104 PRO n 1 105 PRO n 1 106 ALA n 1 107 VAL n 1 108 ARG n 1 109 GLY n 1 110 ASN n 1 111 LEU n 1 112 ALA n 1 113 LEU n 1 114 ASN n 1 115 THR n 1 116 LEU n 1 117 HIS n 1 118 PRO n 1 119 GLY n 1 120 VAL n 1 121 SER n 1 122 VAL n 1 123 GLY n 1 124 GLN n 1 125 ALA n 1 126 THR n 1 127 ILE n 1 128 VAL n 1 129 GLU n 1 130 ILE n 1 131 PHE n 1 132 LEU n 1 133 THR n 1 134 LEU n 1 135 GLN n 1 136 PHE n 1 137 VAL n 1 138 LEU n 1 139 CYS n 1 140 ILE n 1 141 PHE n 1 142 ALA n 1 143 THR n 1 144 TYR n 1 145 ASP n 1 146 GLU n 1 147 ARG n 1 148 ARG n 1 149 ASN n 1 150 GLY n 1 151 ARG n 1 152 LEU n 1 153 GLY n 1 154 SER n 1 155 VAL n 1 156 ALA n 1 157 LEU n 1 158 ALA n 1 159 VAL n 1 160 GLY n 1 161 PHE n 1 162 SER n 1 163 LEU n 1 164 THR n 1 165 LEU n 1 166 GLY n 1 167 HIS n 1 168 LEU n 1 169 PHE n 1 170 GLY n 1 171 MET n 1 172 TYR n 1 173 TYR n 1 174 THR n 1 175 GLY n 1 176 ALA n 1 177 GLY n 1 178 MET n 1 179 ASN n 1 180 PRO n 1 181 ALA n 1 182 ARG n 1 183 SER n 1 184 PHE n 1 185 ALA n 1 186 PRO n 1 187 ALA n 1 188 ILE n 1 189 LEU n 1 190 THR n 1 191 ARG n 1 192 ASN n 1 193 PHE n 1 194 THR n 1 195 ASN n 1 196 HIS n 1 197 TRP n 1 198 VAL n 1 199 TYR n 1 200 TRP n 1 201 VAL n 1 202 GLY n 1 203 PRO n 1 204 VAL n 1 205 ILE n 1 206 GLY n 1 207 ALA n 1 208 GLY n 1 209 LEU n 1 210 GLY n 1 211 SER n 1 212 LEU n 1 213 LEU n 1 214 TYR n 1 215 ASP n 1 216 PHE n 1 217 LEU n 1 218 LEU n 1 219 PHE n 1 220 PRO n 1 221 ARG n 1 222 LEU n 1 223 LYS n 1 224 SER n 1 225 VAL n 1 226 SER n 1 227 GLU n 1 228 ARG n 1 229 LEU n 1 230 SER n 1 231 ILE n 1 232 LEU n 1 233 LYS n 1 234 GLY n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name bovine _entity_src_nat.pdbx_organism_scientific 'Bos taurus' _entity_src_nat.pdbx_ncbi_taxonomy_id ? _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue lens _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location 'plasma membrane' _entity_src_nat.pdbx_organ eye _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell fiber _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name SWS _struct_ref.db_code MIP_BOVIN _struct_ref.pdbx_db_accession P06624 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLR AICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVG FSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKG ; _struct_ref.pdbx_align_begin 6 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1TM8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 234 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P06624 _struct_ref_seq.db_align_beg 6 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 239 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 6 _struct_ref_seq.pdbx_auth_seq_align_end 239 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BNG saccharide . B-NONYLGLUCOSIDE ? 'C15 H30 O6' 306.395 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1TM8 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.889 _exptl_crystal.density_percent_sol 55.78 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 10.0 _exptl_crystal_grow.pdbx_details '30% PEG 1K, 20 mM Glycine, 50 mM NaCl, pH 10.0, VAPOR DIFFUSION, SITTING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2003-10-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.11587 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.11587 # _reflns.entry_id 1TM8 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 2.2 _reflns.number_obs 16284 _reflns.number_all 17379 _reflns.percent_possible_obs 93.7 _reflns.pdbx_Rmerge_I_obs 0.041 _reflns.pdbx_Rsym_value 0.041 _reflns.pdbx_netI_over_av_sigmaI 27.96 _reflns.B_iso_Wilson_estimate 25.7 _reflns.pdbx_redundancy 20.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_netI_over_sigmaI ? # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 80 _reflns_shell.Rmerge_I_obs 0.5 _reflns_shell.pdbx_Rsym_value 0.5 _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.pdbx_redundancy 5.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 660 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1TM8 _refine.ls_number_reflns_obs 17344 _refine.ls_number_reflns_all 17344 _refine.pdbx_ls_sigma_I 2.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 328368.91 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.26 _refine.ls_d_res_high 2.24 _refine.ls_percent_reflns_obs 84.7 _refine.ls_R_factor_obs 0.2467 _refine.ls_R_factor_all 0.2467 _refine.ls_R_factor_R_work 0.2467 _refine.ls_R_factor_R_free 0.2749 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 13214 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 54.7 _refine.aniso_B[1][1] -11.68 _refine.aniso_B[2][2] -11.68 _refine.aniso_B[3][3] 23.35 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.310058 _refine.solvent_model_param_bsol 122.554 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1TM8 _refine_analyze.Luzzati_coordinate_error_obs 0.30 _refine_analyze.Luzzati_sigma_a_obs 0.37 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.33 _refine_analyze.Luzzati_sigma_a_free 0.36 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1761 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 42 _refine_hist.number_atoms_solvent 182 _refine_hist.number_atoms_total 1985 _refine_hist.d_res_high 2.24 _refine_hist.d_res_low 25.26 _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 19.1 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.74 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.37 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.22 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.93 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.66 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.34 _refine_ls_shell.number_reflns_R_work 1272 _refine_ls_shell.R_factor_R_work 0.365 _refine_ls_shell.percent_reflns_obs 49.2 _refine_ls_shell.R_factor_R_free 0.415 _refine_ls_shell.R_factor_R_free_error 0.038 _refine_ls_shell.percent_reflns_R_free 8.4 _refine_ls_shell.number_reflns_R_free 117 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 BNG.PARAM BNG.TOP 'X-RAY DIFFRACTION' 3 WATER.PARAM WATER.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1TM8 _struct.title 'The Channel Architecture of Aquaporin O at 2.2 Angstrom Resolution' _struct.pdbx_descriptor 'Lens fiber major intrinsic protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1TM8 _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text 'integral membrane protein, MIP26, lens, cataract, water channel, MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ;THIS ENTRY CONTAINS A PORTION OF THE BIOLOGICALLY SIGNIFICANT TETRAMER. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 1 ? LEU A 27 ? SER A 6 LEU A 32 1 ? 27 HELX_P HELX_P2 2 GLY A 32 ? GLY A 59 ? GLY A 37 GLY A 64 1 ? 28 HELX_P HELX_P3 3 ASN A 63 ? VAL A 72 ? ASN A 68 VAL A 77 1 ? 10 HELX_P HELX_P4 4 SER A 77 ? THR A 103 ? SER A 82 THR A 108 1 ? 27 HELX_P HELX_P5 5 SER A 121 ? ASP A 145 ? SER A 126 ASP A 150 1 ? 25 HELX_P HELX_P6 6 SER A 154 ? MET A 171 ? SER A 159 MET A 176 1 ? 18 HELX_P HELX_P7 7 ASN A 179 ? ARG A 191 ? ASN A 184 ARG A 196 1 ? 13 HELX_P HELX_P8 8 TRP A 197 ? GLY A 202 ? TRP A 202 GLY A 207 1 ? 6 HELX_P HELX_P9 9 ILE A 205 ? PHE A 216 ? ILE A 210 PHE A 221 1 ? 12 HELX_P HELX_P10 10 SER A 224 ? SER A 224 ? SER A 229 SER A 229 5 ? 1 HELX_P HELX_P11 11 SER A 226 ? SER A 230 ? SER A 231 SER A 235 5 ? 5 HELX_P HELX_P12 12 LEU A 232 ? GLY A 234 ? LEU A 237 GLY A 239 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 1TM8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1TM8 _atom_sites.fract_transf_matrix[1][1] 0.009047 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009047 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018730 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 6 6 SER SER A . n A 1 2 ALA 2 7 7 ALA ALA A . n A 1 3 SER 3 8 8 SER SER A . n A 1 4 PHE 4 9 9 PHE PHE A . n A 1 5 TRP 5 10 10 TRP TRP A . n A 1 6 ARG 6 11 11 ARG ARG A . n A 1 7 ALA 7 12 12 ALA ALA A . n A 1 8 ILE 8 13 13 ILE ILE A . n A 1 9 CYS 9 14 14 CYS CYS A . n A 1 10 ALA 10 15 15 ALA ALA A . n A 1 11 GLU 11 16 16 GLU GLU A . n A 1 12 PHE 12 17 17 PHE PHE A . n A 1 13 PHE 13 18 18 PHE PHE A . n A 1 14 ALA 14 19 19 ALA ALA A . n A 1 15 SER 15 20 20 SER SER A . n A 1 16 LEU 16 21 21 LEU LEU A . n A 1 17 PHE 17 22 22 PHE PHE A . n A 1 18 TYR 18 23 23 TYR TYR A . n A 1 19 VAL 19 24 24 VAL VAL A . n A 1 20 PHE 20 25 25 PHE PHE A . n A 1 21 PHE 21 26 26 PHE PHE A . n A 1 22 GLY 22 27 27 GLY GLY A . n A 1 23 LEU 23 28 28 LEU LEU A . n A 1 24 GLY 24 29 29 GLY GLY A . n A 1 25 ALA 25 30 30 ALA ALA A . n A 1 26 SER 26 31 31 SER SER A . n A 1 27 LEU 27 32 32 LEU LEU A . n A 1 28 ARG 28 33 33 ARG ARG A . n A 1 29 TRP 29 34 34 TRP TRP A . n A 1 30 ALA 30 35 35 ALA ALA A . n A 1 31 PRO 31 36 ? ? ? A . n A 1 32 GLY 32 37 37 GLY GLY A . n A 1 33 PRO 33 38 38 PRO PRO A . n A 1 34 LEU 34 39 39 LEU LEU A . n A 1 35 HIS 35 40 40 HIS HIS A . n A 1 36 VAL 36 41 41 VAL VAL A . n A 1 37 LEU 37 42 42 LEU LEU A . n A 1 38 GLN 38 43 43 GLN GLN A . n A 1 39 VAL 39 44 44 VAL VAL A . n A 1 40 ALA 40 45 45 ALA ALA A . n A 1 41 LEU 41 46 46 LEU LEU A . n A 1 42 ALA 42 47 47 ALA ALA A . n A 1 43 PHE 43 48 48 PHE PHE A . n A 1 44 GLY 44 49 49 GLY GLY A . n A 1 45 LEU 45 50 50 LEU LEU A . n A 1 46 ALA 46 51 51 ALA ALA A . n A 1 47 LEU 47 52 52 LEU LEU A . n A 1 48 ALA 48 53 53 ALA ALA A . n A 1 49 THR 49 54 54 THR THR A . n A 1 50 LEU 50 55 55 LEU LEU A . n A 1 51 VAL 51 56 56 VAL VAL A . n A 1 52 GLN 52 57 57 GLN GLN A . n A 1 53 ALA 53 58 58 ALA ALA A . n A 1 54 VAL 54 59 59 VAL VAL A . n A 1 55 GLY 55 60 60 GLY GLY A . n A 1 56 HIS 56 61 61 HIS HIS A . n A 1 57 ILE 57 62 62 ILE ILE A . n A 1 58 SER 58 63 63 SER SER A . n A 1 59 GLY 59 64 64 GLY GLY A . n A 1 60 ALA 60 65 65 ALA ALA A . n A 1 61 HIS 61 66 66 HIS HIS A . n A 1 62 VAL 62 67 67 VAL VAL A . n A 1 63 ASN 63 68 68 ASN ASN A . n A 1 64 PRO 64 69 69 PRO PRO A . n A 1 65 ALA 65 70 70 ALA ALA A . n A 1 66 VAL 66 71 71 VAL VAL A . n A 1 67 THR 67 72 72 THR THR A . n A 1 68 PHE 68 73 73 PHE PHE A . n A 1 69 ALA 69 74 74 ALA ALA A . n A 1 70 PHE 70 75 75 PHE PHE A . n A 1 71 LEU 71 76 76 LEU LEU A . n A 1 72 VAL 72 77 77 VAL VAL A . n A 1 73 GLY 73 78 78 GLY GLY A . n A 1 74 SER 74 79 79 SER SER A . n A 1 75 GLN 75 80 80 GLN GLN A . n A 1 76 MET 76 81 81 MET MET A . n A 1 77 SER 77 82 82 SER SER A . n A 1 78 LEU 78 83 83 LEU LEU A . n A 1 79 LEU 79 84 84 LEU LEU A . n A 1 80 ARG 80 85 85 ARG ARG A . n A 1 81 ALA 81 86 86 ALA ALA A . n A 1 82 ILE 82 87 87 ILE ILE A . n A 1 83 CYS 83 88 88 CYS CYS A . n A 1 84 TYR 84 89 89 TYR TYR A . n A 1 85 MET 85 90 90 MET MET A . n A 1 86 VAL 86 91 91 VAL VAL A . n A 1 87 ALA 87 92 92 ALA ALA A . n A 1 88 GLN 88 93 93 GLN GLN A . n A 1 89 LEU 89 94 94 LEU LEU A . n A 1 90 LEU 90 95 95 LEU LEU A . n A 1 91 GLY 91 96 96 GLY GLY A . n A 1 92 ALA 92 97 97 ALA ALA A . n A 1 93 VAL 93 98 98 VAL VAL A . n A 1 94 ALA 94 99 99 ALA ALA A . n A 1 95 GLY 95 100 100 GLY GLY A . n A 1 96 ALA 96 101 101 ALA ALA A . n A 1 97 ALA 97 102 102 ALA ALA A . n A 1 98 VAL 98 103 103 VAL VAL A . n A 1 99 LEU 99 104 104 LEU LEU A . n A 1 100 TYR 100 105 105 TYR TYR A . n A 1 101 SER 101 106 106 SER SER A . n A 1 102 VAL 102 107 107 VAL VAL A . n A 1 103 THR 103 108 108 THR THR A . n A 1 104 PRO 104 109 109 PRO PRO A . n A 1 105 PRO 105 110 110 PRO PRO A . n A 1 106 ALA 106 111 111 ALA ALA A . n A 1 107 VAL 107 112 112 VAL VAL A . n A 1 108 ARG 108 113 113 ARG ARG A . n A 1 109 GLY 109 114 114 GLY GLY A . n A 1 110 ASN 110 115 115 ASN ASN A . n A 1 111 LEU 111 116 116 LEU LEU A . n A 1 112 ALA 112 117 117 ALA ALA A . n A 1 113 LEU 113 118 118 LEU LEU A . n A 1 114 ASN 114 119 119 ASN ASN A . n A 1 115 THR 115 120 120 THR THR A . n A 1 116 LEU 116 121 121 LEU LEU A . n A 1 117 HIS 117 122 122 HIS HIS A . n A 1 118 PRO 118 123 123 PRO PRO A . n A 1 119 GLY 119 124 124 GLY GLY A . n A 1 120 VAL 120 125 125 VAL VAL A . n A 1 121 SER 121 126 126 SER SER A . n A 1 122 VAL 122 127 127 VAL VAL A . n A 1 123 GLY 123 128 128 GLY GLY A . n A 1 124 GLN 124 129 129 GLN GLN A . n A 1 125 ALA 125 130 130 ALA ALA A . n A 1 126 THR 126 131 131 THR THR A . n A 1 127 ILE 127 132 132 ILE ILE A . n A 1 128 VAL 128 133 133 VAL VAL A . n A 1 129 GLU 129 134 134 GLU GLU A . n A 1 130 ILE 130 135 135 ILE ILE A . n A 1 131 PHE 131 136 136 PHE PHE A . n A 1 132 LEU 132 137 137 LEU LEU A . n A 1 133 THR 133 138 138 THR THR A . n A 1 134 LEU 134 139 139 LEU LEU A . n A 1 135 GLN 135 140 140 GLN GLN A . n A 1 136 PHE 136 141 141 PHE PHE A . n A 1 137 VAL 137 142 142 VAL VAL A . n A 1 138 LEU 138 143 143 LEU LEU A . n A 1 139 CYS 139 144 144 CYS CYS A . n A 1 140 ILE 140 145 145 ILE ILE A . n A 1 141 PHE 141 146 146 PHE PHE A . n A 1 142 ALA 142 147 147 ALA ALA A . n A 1 143 THR 143 148 148 THR THR A . n A 1 144 TYR 144 149 149 TYR TYR A . n A 1 145 ASP 145 150 150 ASP ASP A . n A 1 146 GLU 146 151 151 GLU GLU A . n A 1 147 ARG 147 152 152 ARG ARG A . n A 1 148 ARG 148 153 153 ARG ARG A . n A 1 149 ASN 149 154 154 ASN ASN A . n A 1 150 GLY 150 155 155 GLY GLY A . n A 1 151 ARG 151 156 156 ARG ARG A . n A 1 152 LEU 152 157 157 LEU LEU A . n A 1 153 GLY 153 158 158 GLY GLY A . n A 1 154 SER 154 159 159 SER SER A . n A 1 155 VAL 155 160 160 VAL VAL A . n A 1 156 ALA 156 161 161 ALA ALA A . n A 1 157 LEU 157 162 162 LEU LEU A . n A 1 158 ALA 158 163 163 ALA ALA A . n A 1 159 VAL 159 164 164 VAL VAL A . n A 1 160 GLY 160 165 165 GLY GLY A . n A 1 161 PHE 161 166 166 PHE PHE A . n A 1 162 SER 162 167 167 SER SER A . n A 1 163 LEU 163 168 168 LEU LEU A . n A 1 164 THR 164 169 169 THR THR A . n A 1 165 LEU 165 170 170 LEU LEU A . n A 1 166 GLY 166 171 171 GLY GLY A . n A 1 167 HIS 167 172 172 HIS HIS A . n A 1 168 LEU 168 173 173 LEU LEU A . n A 1 169 PHE 169 174 174 PHE PHE A . n A 1 170 GLY 170 175 175 GLY GLY A . n A 1 171 MET 171 176 176 MET MET A . n A 1 172 TYR 172 177 177 TYR TYR A . n A 1 173 TYR 173 178 178 TYR TYR A . n A 1 174 THR 174 179 179 THR THR A . n A 1 175 GLY 175 180 180 GLY GLY A . n A 1 176 ALA 176 181 181 ALA ALA A . n A 1 177 GLY 177 182 182 GLY GLY A . n A 1 178 MET 178 183 183 MET MET A . n A 1 179 ASN 179 184 184 ASN ASN A . n A 1 180 PRO 180 185 185 PRO PRO A . n A 1 181 ALA 181 186 186 ALA ALA A . n A 1 182 ARG 182 187 187 ARG ARG A . n A 1 183 SER 183 188 188 SER SER A . n A 1 184 PHE 184 189 189 PHE PHE A . n A 1 185 ALA 185 190 190 ALA ALA A . n A 1 186 PRO 186 191 191 PRO PRO A . n A 1 187 ALA 187 192 192 ALA ALA A . n A 1 188 ILE 188 193 193 ILE ILE A . n A 1 189 LEU 189 194 194 LEU LEU A . n A 1 190 THR 190 195 195 THR THR A . n A 1 191 ARG 191 196 196 ARG ARG A . n A 1 192 ASN 192 197 197 ASN ASN A . n A 1 193 PHE 193 198 198 PHE PHE A . n A 1 194 THR 194 199 199 THR THR A . n A 1 195 ASN 195 200 200 ASN ASN A . n A 1 196 HIS 196 201 201 HIS HIS A . n A 1 197 TRP 197 202 202 TRP TRP A . n A 1 198 VAL 198 203 203 VAL VAL A . n A 1 199 TYR 199 204 204 TYR TYR A . n A 1 200 TRP 200 205 205 TRP TRP A . n A 1 201 VAL 201 206 206 VAL VAL A . n A 1 202 GLY 202 207 207 GLY GLY A . n A 1 203 PRO 203 208 208 PRO PRO A . n A 1 204 VAL 204 209 209 VAL VAL A . n A 1 205 ILE 205 210 210 ILE ILE A . n A 1 206 GLY 206 211 211 GLY GLY A . n A 1 207 ALA 207 212 212 ALA ALA A . n A 1 208 GLY 208 213 213 GLY GLY A . n A 1 209 LEU 209 214 214 LEU LEU A . n A 1 210 GLY 210 215 215 GLY GLY A . n A 1 211 SER 211 216 216 SER SER A . n A 1 212 LEU 212 217 217 LEU LEU A . n A 1 213 LEU 213 218 218 LEU LEU A . n A 1 214 TYR 214 219 219 TYR TYR A . n A 1 215 ASP 215 220 220 ASP ASP A . n A 1 216 PHE 216 221 221 PHE PHE A . n A 1 217 LEU 217 222 222 LEU LEU A . n A 1 218 LEU 218 223 223 LEU LEU A . n A 1 219 PHE 219 224 224 PHE PHE A . n A 1 220 PRO 220 225 225 PRO PRO A . n A 1 221 ARG 221 226 226 ARG ARG A . n A 1 222 LEU 222 227 227 LEU LEU A . n A 1 223 LYS 223 228 228 LYS LYS A . n A 1 224 SER 224 229 229 SER SER A . n A 1 225 VAL 225 230 230 VAL VAL A . n A 1 226 SER 226 231 231 SER SER A . n A 1 227 GLU 227 232 232 GLU GLU A . n A 1 228 ARG 228 233 233 ARG ARG A . n A 1 229 LEU 229 234 234 LEU LEU A . n A 1 230 SER 230 235 235 SER SER A . n A 1 231 ILE 231 236 236 ILE ILE A . n A 1 232 LEU 232 237 237 LEU LEU A . n A 1 233 LYS 233 238 238 LYS LYS A . n A 1 234 GLY 234 239 239 GLY GLY A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BNG 1 300 300 BNG BNG ? . C 2 BNG 1 301 301 BNG BNG ? . D 3 HOH 1 400 400 HOH HOH ? . D 3 HOH 2 401 401 HOH HOH ? . D 3 HOH 3 402 402 HOH HOH ? . D 3 HOH 4 403 403 HOH HOH ? . D 3 HOH 5 404 404 HOH HOH ? . D 3 HOH 6 405 405 HOH HOH ? . D 3 HOH 7 406 406 HOH HOH ? . D 3 HOH 8 407 407 HOH HOH ? . D 3 HOH 9 408 408 HOH HOH ? . D 3 HOH 10 409 409 HOH HOH ? . D 3 HOH 11 410 410 HOH HOH ? . D 3 HOH 12 411 411 HOH HOH ? . D 3 HOH 13 412 412 HOH HOH ? . D 3 HOH 14 413 413 HOH HOH ? . D 3 HOH 15 414 414 HOH HOH ? . D 3 HOH 16 415 415 HOH HOH ? . D 3 HOH 17 416 416 HOH HOH ? . D 3 HOH 18 417 417 HOH HOH ? . D 3 HOH 19 418 418 HOH HOH ? . D 3 HOH 20 419 419 HOH HOH ? . D 3 HOH 21 420 420 HOH HOH ? . D 3 HOH 22 421 421 HOH HOH ? . D 3 HOH 23 422 422 HOH HOH ? . D 3 HOH 24 423 423 HOH HOH ? . D 3 HOH 25 424 424 HOH HOH ? . D 3 HOH 26 425 425 HOH HOH ? . D 3 HOH 27 426 426 HOH HOH ? . D 3 HOH 28 427 427 HOH HOH ? . D 3 HOH 29 428 428 HOH HOH ? . D 3 HOH 30 429 429 HOH HOH ? . D 3 HOH 31 430 430 HOH HOH ? . D 3 HOH 32 431 431 HOH HOH ? . D 3 HOH 33 432 432 HOH HOH ? . D 3 HOH 34 433 433 HOH HOH ? . D 3 HOH 35 434 434 HOH HOH ? . D 3 HOH 36 435 435 HOH HOH ? . D 3 HOH 37 436 436 HOH HOH ? . D 3 HOH 38 437 437 HOH HOH ? . D 3 HOH 39 438 438 HOH HOH ? . D 3 HOH 40 439 439 HOH HOH ? . D 3 HOH 41 440 440 HOH HOH ? . D 3 HOH 42 441 441 HOH HOH ? . D 3 HOH 43 442 442 HOH HOH ? . D 3 HOH 44 443 443 HOH HOH ? . D 3 HOH 45 444 444 HOH HOH ? . D 3 HOH 46 445 445 HOH HOH ? . D 3 HOH 47 446 446 HOH HOH ? . D 3 HOH 48 447 447 HOH HOH ? . D 3 HOH 49 448 448 HOH HOH ? . D 3 HOH 50 449 449 HOH HOH ? . D 3 HOH 51 450 450 HOH HOH ? . D 3 HOH 52 451 451 HOH HOH ? . D 3 HOH 53 452 452 HOH HOH ? . D 3 HOH 54 453 453 HOH HOH ? . D 3 HOH 55 454 454 HOH HOH ? . D 3 HOH 56 455 455 HOH HOH ? . D 3 HOH 57 456 456 HOH HOH ? . D 3 HOH 58 457 457 HOH HOH ? . D 3 HOH 59 458 458 HOH HOH ? . D 3 HOH 60 459 459 HOH HOH ? . D 3 HOH 61 460 460 HOH HOH ? . D 3 HOH 62 461 461 HOH HOH ? . D 3 HOH 63 462 462 HOH HOH ? . D 3 HOH 64 463 463 HOH HOH ? . D 3 HOH 65 464 464 HOH HOH ? . D 3 HOH 66 465 465 HOH HOH ? . D 3 HOH 67 466 466 HOH HOH ? . D 3 HOH 68 467 467 HOH HOH ? . D 3 HOH 69 468 468 HOH HOH ? . D 3 HOH 70 469 469 HOH HOH ? . D 3 HOH 71 470 470 HOH HOH ? . D 3 HOH 72 471 471 HOH HOH ? . D 3 HOH 73 472 472 HOH HOH ? . D 3 HOH 74 473 473 HOH HOH ? . D 3 HOH 75 474 474 HOH HOH ? . D 3 HOH 76 475 475 HOH HOH ? . D 3 HOH 77 476 476 HOH HOH ? . D 3 HOH 78 477 477 HOH HOH ? . D 3 HOH 79 478 478 HOH HOH ? . D 3 HOH 80 479 479 HOH HOH ? . D 3 HOH 81 480 480 HOH HOH ? . D 3 HOH 82 481 481 HOH HOH ? . D 3 HOH 83 482 482 HOH HOH ? . D 3 HOH 84 483 483 HOH HOH ? . D 3 HOH 85 484 484 HOH HOH ? . D 3 HOH 86 485 485 HOH HOH ? . D 3 HOH 87 486 486 HOH HOH ? . D 3 HOH 88 487 487 HOH HOH ? . D 3 HOH 89 488 488 HOH HOH ? . D 3 HOH 90 489 489 HOH HOH ? . D 3 HOH 91 490 490 HOH HOH ? . D 3 HOH 92 491 491 HOH HOH ? . D 3 HOH 93 492 492 HOH HOH ? . D 3 HOH 94 493 493 HOH HOH ? . D 3 HOH 95 494 494 HOH HOH ? . D 3 HOH 96 495 495 HOH HOH ? . D 3 HOH 97 496 496 HOH HOH ? . D 3 HOH 98 497 497 HOH HOH ? . D 3 HOH 99 498 498 HOH HOH ? . D 3 HOH 100 499 499 HOH HOH ? . D 3 HOH 101 500 500 HOH HOH ? . D 3 HOH 102 501 501 HOH HOH ? . D 3 HOH 103 502 502 HOH HOH ? . D 3 HOH 104 503 503 HOH HOH ? . D 3 HOH 105 504 504 HOH HOH ? . D 3 HOH 106 505 505 HOH HOH ? . D 3 HOH 107 506 506 HOH HOH ? . D 3 HOH 108 507 507 HOH HOH ? . D 3 HOH 109 508 508 HOH HOH ? . D 3 HOH 110 509 509 HOH HOH ? . D 3 HOH 111 510 510 HOH HOH ? . D 3 HOH 112 511 511 HOH HOH ? . D 3 HOH 113 512 512 HOH HOH ? . D 3 HOH 114 513 513 HOH HOH ? . D 3 HOH 115 514 514 HOH HOH ? . D 3 HOH 116 515 515 HOH HOH ? . D 3 HOH 117 516 516 HOH HOH ? . D 3 HOH 118 517 517 HOH HOH ? . D 3 HOH 119 518 518 HOH HOH ? . D 3 HOH 120 519 519 HOH HOH ? . D 3 HOH 121 520 520 HOH HOH ? . D 3 HOH 122 521 521 HOH HOH ? . D 3 HOH 123 522 522 HOH HOH ? . D 3 HOH 124 523 523 HOH HOH ? . D 3 HOH 125 524 524 HOH HOH ? . D 3 HOH 126 525 525 HOH HOH ? . D 3 HOH 127 526 526 HOH HOH ? . D 3 HOH 128 527 527 HOH HOH ? . D 3 HOH 129 528 528 HOH HOH ? . D 3 HOH 130 529 529 HOH HOH ? . D 3 HOH 131 530 530 HOH HOH ? . D 3 HOH 132 531 531 HOH HOH ? . D 3 HOH 133 532 532 HOH HOH ? . D 3 HOH 134 533 533 HOH HOH ? . D 3 HOH 135 534 534 HOH HOH ? . D 3 HOH 136 535 535 HOH HOH ? . D 3 HOH 137 536 536 HOH HOH ? . D 3 HOH 138 537 537 HOH HOH ? . D 3 HOH 139 538 538 HOH HOH ? . D 3 HOH 140 539 539 HOH HOH ? . D 3 HOH 141 540 540 HOH HOH ? . D 3 HOH 142 541 541 HOH HOH ? . D 3 HOH 143 542 542 HOH HOH ? . D 3 HOH 144 543 543 HOH HOH ? . D 3 HOH 145 544 544 HOH HOH ? . D 3 HOH 146 545 545 HOH HOH ? . D 3 HOH 147 546 546 HOH HOH ? . D 3 HOH 148 547 547 HOH HOH ? . D 3 HOH 149 548 548 HOH HOH ? . D 3 HOH 150 549 549 HOH HOH ? . D 3 HOH 151 550 550 HOH HOH ? . D 3 HOH 152 551 551 HOH HOH ? . D 3 HOH 153 552 552 HOH HOH ? . D 3 HOH 154 553 553 HOH HOH ? . D 3 HOH 155 554 554 HOH HOH ? . D 3 HOH 156 555 555 HOH HOH ? . D 3 HOH 157 556 556 HOH HOH ? . D 3 HOH 158 557 557 HOH HOH ? . D 3 HOH 159 558 558 HOH HOH ? . D 3 HOH 160 559 559 HOH HOH ? . D 3 HOH 161 560 560 HOH HOH ? . D 3 HOH 162 561 561 HOH HOH ? . D 3 HOH 163 562 562 HOH HOH ? . D 3 HOH 164 563 563 HOH HOH ? . D 3 HOH 165 564 564 HOH HOH ? . D 3 HOH 166 565 565 HOH HOH ? . D 3 HOH 167 566 566 HOH HOH ? . D 3 HOH 168 567 567 HOH HOH ? . D 3 HOH 169 568 568 HOH HOH ? . D 3 HOH 170 569 569 HOH HOH ? . D 3 HOH 171 570 570 HOH HOH ? . D 3 HOH 172 571 571 HOH HOH ? . D 3 HOH 173 572 572 HOH HOH ? . D 3 HOH 174 573 573 HOH HOH ? . D 3 HOH 175 574 574 HOH HOH ? . D 3 HOH 176 575 575 HOH HOH ? . D 3 HOH 177 576 576 HOH HOH ? . D 3 HOH 178 577 577 HOH HOH ? . D 3 HOH 179 578 578 HOH HOH ? . D 3 HOH 180 579 579 HOH HOH ? . D 3 HOH 181 580 580 HOH HOH ? . D 3 HOH 182 581 581 HOH HOH ? . # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 . HOH 524 ? D HOH . 2 1 . HOH 579 ? D HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-10-05 2 'Structure model' 1 1 2005-02-08 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # _software.name CNS _software.classification refinement _software.version 1.1 _software.citation_id ? _software.pdbx_ordinal 1 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NH2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 33 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 ND1 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HIS _pdbx_validate_close_contact.auth_seq_id_2 40 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 SER _pdbx_validate_symm_contact.auth_seq_id_1 106 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 NE2 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 GLN _pdbx_validate_symm_contact.auth_seq_id_2 129 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_555 _pdbx_validate_symm_contact.dist 2.04 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N A GLY 27 ? ? CA A GLY 27 ? ? 1.352 1.456 -0.104 0.015 N 2 1 N A GLY 29 ? ? CA A GLY 29 ? ? 1.349 1.456 -0.107 0.015 N 3 1 N A PRO 38 ? ? CA A PRO 38 ? ? 1.361 1.468 -0.107 0.017 N 4 1 CD A PRO 38 ? ? N A PRO 38 ? ? 1.616 1.474 0.142 0.014 N 5 1 N A GLY 49 ? ? CA A GLY 49 ? ? 1.350 1.456 -0.106 0.015 N 6 1 N A GLY 60 ? ? CA A GLY 60 ? ? 1.353 1.456 -0.103 0.015 N 7 1 N A GLY 64 ? ? CA A GLY 64 ? ? 1.346 1.456 -0.110 0.015 N 8 1 CD A PRO 69 ? ? N A PRO 69 ? ? 1.614 1.474 0.140 0.014 N 9 1 N A GLY 78 ? ? CA A GLY 78 ? ? 1.348 1.456 -0.108 0.015 N 10 1 N A GLY 96 ? ? CA A GLY 96 ? ? 1.351 1.456 -0.105 0.015 N 11 1 N A GLY 100 ? ? CA A GLY 100 ? ? 1.356 1.456 -0.100 0.015 N 12 1 N A PRO 109 ? ? CA A PRO 109 ? ? 1.362 1.468 -0.106 0.017 N 13 1 CD A PRO 109 ? ? N A PRO 109 ? ? 1.616 1.474 0.142 0.014 N 14 1 N A PRO 110 ? ? CA A PRO 110 ? ? 1.359 1.468 -0.109 0.017 N 15 1 CD A PRO 110 ? ? N A PRO 110 ? ? 1.617 1.474 0.143 0.014 N 16 1 N A GLY 114 ? ? CA A GLY 114 ? ? 1.350 1.456 -0.106 0.015 N 17 1 CD A PRO 123 ? ? N A PRO 123 ? ? 1.612 1.474 0.138 0.014 N 18 1 N A GLY 124 ? ? CA A GLY 124 ? ? 1.351 1.456 -0.105 0.015 N 19 1 N A GLY 128 ? ? CA A GLY 128 ? ? 1.348 1.456 -0.108 0.015 N 20 1 N A GLY 155 ? ? CA A GLY 155 ? ? 1.344 1.456 -0.112 0.015 N 21 1 N A GLY 158 ? ? CA A GLY 158 ? ? 1.347 1.456 -0.109 0.015 N 22 1 N A GLY 165 ? ? CA A GLY 165 ? ? 1.353 1.456 -0.103 0.015 N 23 1 N A GLY 171 ? ? CA A GLY 171 ? ? 1.353 1.456 -0.103 0.015 N 24 1 N A GLY 175 ? ? CA A GLY 175 ? ? 1.356 1.456 -0.100 0.015 N 25 1 N A GLY 180 ? ? CA A GLY 180 ? ? 1.344 1.456 -0.112 0.015 N 26 1 N A GLY 182 ? ? CA A GLY 182 ? ? 1.349 1.456 -0.107 0.015 N 27 1 CD A PRO 185 ? ? N A PRO 185 ? ? 1.611 1.474 0.137 0.014 N 28 1 CD A PRO 191 ? ? N A PRO 191 ? ? 1.615 1.474 0.141 0.014 N 29 1 N A GLY 207 ? ? CA A GLY 207 ? ? 1.351 1.456 -0.105 0.015 N 30 1 N A PRO 208 ? ? CA A PRO 208 ? ? 1.366 1.468 -0.102 0.017 N 31 1 CD A PRO 208 ? ? N A PRO 208 ? ? 1.615 1.474 0.141 0.014 N 32 1 N A GLY 211 ? ? CA A GLY 211 ? ? 1.358 1.456 -0.098 0.015 N 33 1 N A GLY 213 ? ? CA A GLY 213 ? ? 1.352 1.456 -0.104 0.015 N 34 1 N A GLY 215 ? ? CA A GLY 215 ? ? 1.352 1.456 -0.104 0.015 N 35 1 CD A PRO 225 ? ? N A PRO 225 ? ? 1.615 1.474 0.141 0.014 N 36 1 N A GLY 239 ? ? CA A GLY 239 ? ? 1.350 1.456 -0.106 0.015 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A PRO 38 ? ? CA A PRO 38 ? ? CB A PRO 38 ? ? 110.53 103.30 7.23 1.20 N 2 1 N A PRO 109 ? ? CA A PRO 109 ? ? CB A PRO 109 ? ? 110.52 103.30 7.22 1.20 N 3 1 N A PRO 123 ? ? CA A PRO 123 ? ? CB A PRO 123 ? ? 110.50 103.30 7.20 1.20 N 4 1 CB A ASN 154 ? ? CA A ASN 154 ? ? C A ASN 154 ? ? 97.24 110.40 -13.16 2.00 N 5 1 N A ASN 154 ? ? CA A ASN 154 ? ? C A ASN 154 ? ? 134.24 111.00 23.24 2.70 N 6 1 N A GLY 155 ? ? CA A GLY 155 ? ? C A GLY 155 ? ? 96.80 113.10 -16.30 2.50 N 7 1 N A PRO 191 ? ? CA A PRO 191 ? ? CB A PRO 191 ? ? 110.53 103.30 7.23 1.20 N 8 1 N A PRO 208 ? ? CA A PRO 208 ? ? CB A PRO 208 ? ? 110.52 103.30 7.22 1.20 N 9 1 N A PRO 225 ? ? CA A PRO 225 ? ? CB A PRO 225 ? ? 110.51 103.30 7.21 1.20 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 8 ? ? -81.82 32.38 2 1 PHE A 9 ? ? -134.67 -36.63 3 1 ARG A 33 ? ? 119.58 -138.99 4 1 TRP A 34 ? ? -147.28 -146.54 5 1 ALA A 65 ? ? 45.47 73.62 6 1 VAL A 67 ? ? 42.22 24.74 7 1 PRO A 110 ? ? -54.01 172.03 8 1 ALA A 111 ? ? 78.89 -37.75 9 1 ASN A 154 ? ? 29.23 142.47 10 1 ALA A 181 ? ? 66.56 94.00 11 1 MET A 183 ? ? 52.29 4.44 12 1 ASN A 184 ? ? -161.06 110.14 13 1 ASN A 200 ? ? 47.16 13.06 14 1 LEU A 222 ? ? -177.03 -68.41 15 1 VAL A 230 ? ? -38.65 -33.39 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id PRO _pdbx_unobs_or_zero_occ_residues.auth_seq_id 36 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id PRO _pdbx_unobs_or_zero_occ_residues.label_seq_id 31 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 B-NONYLGLUCOSIDE BNG 3 water HOH #