data_1TNR # _entry.id 1TNR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.360 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1TNR pdb_00001tnr 10.2210/pdb1tnr/pdb WWPDB D_1000176760 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1TNR _pdbx_database_status.recvd_initial_deposition_date 1994-05-09 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Banner, D.W.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID ? # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal structure of the soluble human 55 kd TNF receptor-human TNF beta complex: implications for TNF receptor activation.' 'Cell(Cambridge,Mass.)' 73 431 445 1993 CELLB5 US 0092-8674 0998 ? 8387891 '10.1016/0092-8674(93)90132-a' 1 'Crystallization and preliminary crystallographic analysis of a TNF-beta-55 kDa TNF receptor complex.' J.Mol.Biol. 229 555 557 1993 JMOBAK UK 0022-2836 0070 ? 8381494 10.1006/jmbi.1993.1055 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Banner, D.W.' 1 ? primary ;D'Arcy, A. ; 2 ? primary 'Janes, W.' 3 ? primary 'Gentz, R.' 4 ? primary 'Schoenfeld, H.J.' 5 ? primary 'Broger, C.' 6 ? primary 'Loetscher, H.' 7 ? primary 'Lesslauer, W.' 8 ? 1 ;D'Arcy, A. ; 9 ? 1 'Banner, D.W.' 10 ? 1 'Janes, W.' 11 ? 1 'Winkler, F.K.' 12 ? 1 'Loetscher, H.' 13 ? 1 'Schonfeld, H.J.' 14 ? 1 'Zulauf, M.' 15 ? 1 'Gentz, R.' 16 ? 1 'Lesslauer, W.' 17 ? # _cell.entry_id 1TNR _cell.length_a 145.640 _cell.length_b 145.640 _cell.length_c 145.640 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TNR _symmetry.space_group_name_H-M 'I 2 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'TUMOR NECROSIS FACTOR BETA' 15872.904 1 ? ? ? ? 2 polymer man 'TUMOR NECROSIS FACTOR RECEPTOR P55' 15766.797 1 ? ? ? ? 3 water nat water 18.015 46 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;KPAAHLIGDPSKQNSLLWRANTDRAFLQDGFSLSNNSLLVPTSGIYFVYSQVVFSGKAYSPKATSSPLYLAHEVQLFSSQ YPFHVPLLSSQKMVYPGLQEPWLHSMYHGAAFQLTQGDQLSTHTDGIPHLVLSPSTVFFGAFAL ; ;KPAAHLIGDPSKQNSLLWRANTDRAFLQDGFSLSNNSLLVPTSGIYFVYSQVVFSGKAYSPKATSSPLYLAHEVQLFSSQ YPFHVPLLSSQKMVYPGLQEPWLHSMYHGAAFQLTQGDQLSTHTDGIPHLVLSPSTVFFGAFAL ; A ? 2 'polypeptide(L)' no no ;CPQGKYIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDT VCGCRKNQYRHYWSENLFQCFNCSLCLNGTVHLSCQEKQNTVCTCHAGFFLRENECVSC ; ;CPQGKYIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDT VCGCRKNQYRHYWSENLFQCFNCSLCLNGTVHLSCQEKQNTVCTCHAGFFLRENECVSC ; R ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 PRO n 1 3 ALA n 1 4 ALA n 1 5 HIS n 1 6 LEU n 1 7 ILE n 1 8 GLY n 1 9 ASP n 1 10 PRO n 1 11 SER n 1 12 LYS n 1 13 GLN n 1 14 ASN n 1 15 SER n 1 16 LEU n 1 17 LEU n 1 18 TRP n 1 19 ARG n 1 20 ALA n 1 21 ASN n 1 22 THR n 1 23 ASP n 1 24 ARG n 1 25 ALA n 1 26 PHE n 1 27 LEU n 1 28 GLN n 1 29 ASP n 1 30 GLY n 1 31 PHE n 1 32 SER n 1 33 LEU n 1 34 SER n 1 35 ASN n 1 36 ASN n 1 37 SER n 1 38 LEU n 1 39 LEU n 1 40 VAL n 1 41 PRO n 1 42 THR n 1 43 SER n 1 44 GLY n 1 45 ILE n 1 46 TYR n 1 47 PHE n 1 48 VAL n 1 49 TYR n 1 50 SER n 1 51 GLN n 1 52 VAL n 1 53 VAL n 1 54 PHE n 1 55 SER n 1 56 GLY n 1 57 LYS n 1 58 ALA n 1 59 TYR n 1 60 SER n 1 61 PRO n 1 62 LYS n 1 63 ALA n 1 64 THR n 1 65 SER n 1 66 SER n 1 67 PRO n 1 68 LEU n 1 69 TYR n 1 70 LEU n 1 71 ALA n 1 72 HIS n 1 73 GLU n 1 74 VAL n 1 75 GLN n 1 76 LEU n 1 77 PHE n 1 78 SER n 1 79 SER n 1 80 GLN n 1 81 TYR n 1 82 PRO n 1 83 PHE n 1 84 HIS n 1 85 VAL n 1 86 PRO n 1 87 LEU n 1 88 LEU n 1 89 SER n 1 90 SER n 1 91 GLN n 1 92 LYS n 1 93 MET n 1 94 VAL n 1 95 TYR n 1 96 PRO n 1 97 GLY n 1 98 LEU n 1 99 GLN n 1 100 GLU n 1 101 PRO n 1 102 TRP n 1 103 LEU n 1 104 HIS n 1 105 SER n 1 106 MET n 1 107 TYR n 1 108 HIS n 1 109 GLY n 1 110 ALA n 1 111 ALA n 1 112 PHE n 1 113 GLN n 1 114 LEU n 1 115 THR n 1 116 GLN n 1 117 GLY n 1 118 ASP n 1 119 GLN n 1 120 LEU n 1 121 SER n 1 122 THR n 1 123 HIS n 1 124 THR n 1 125 ASP n 1 126 GLY n 1 127 ILE n 1 128 PRO n 1 129 HIS n 1 130 LEU n 1 131 VAL n 1 132 LEU n 1 133 SER n 1 134 PRO n 1 135 SER n 1 136 THR n 1 137 VAL n 1 138 PHE n 1 139 PHE n 1 140 GLY n 1 141 ALA n 1 142 PHE n 1 143 ALA n 1 144 LEU n 2 1 CYS n 2 2 PRO n 2 3 GLN n 2 4 GLY n 2 5 LYS n 2 6 TYR n 2 7 ILE n 2 8 HIS n 2 9 PRO n 2 10 GLN n 2 11 ASN n 2 12 ASN n 2 13 SER n 2 14 ILE n 2 15 CYS n 2 16 CYS n 2 17 THR n 2 18 LYS n 2 19 CYS n 2 20 HIS n 2 21 LYS n 2 22 GLY n 2 23 THR n 2 24 TYR n 2 25 LEU n 2 26 TYR n 2 27 ASN n 2 28 ASP n 2 29 CYS n 2 30 PRO n 2 31 GLY n 2 32 PRO n 2 33 GLY n 2 34 GLN n 2 35 ASP n 2 36 THR n 2 37 ASP n 2 38 CYS n 2 39 ARG n 2 40 GLU n 2 41 CYS n 2 42 GLU n 2 43 SER n 2 44 GLY n 2 45 SER n 2 46 PHE n 2 47 THR n 2 48 ALA n 2 49 SER n 2 50 GLU n 2 51 ASN n 2 52 HIS n 2 53 LEU n 2 54 ARG n 2 55 HIS n 2 56 CYS n 2 57 LEU n 2 58 SER n 2 59 CYS n 2 60 SER n 2 61 LYS n 2 62 CYS n 2 63 ARG n 2 64 LYS n 2 65 GLU n 2 66 MET n 2 67 GLY n 2 68 GLN n 2 69 VAL n 2 70 GLU n 2 71 ILE n 2 72 SER n 2 73 SER n 2 74 CYS n 2 75 THR n 2 76 VAL n 2 77 ASP n 2 78 ARG n 2 79 ASP n 2 80 THR n 2 81 VAL n 2 82 CYS n 2 83 GLY n 2 84 CYS n 2 85 ARG n 2 86 LYS n 2 87 ASN n 2 88 GLN n 2 89 TYR n 2 90 ARG n 2 91 HIS n 2 92 TYR n 2 93 TRP n 2 94 SER n 2 95 GLU n 2 96 ASN n 2 97 LEU n 2 98 PHE n 2 99 GLN n 2 100 CYS n 2 101 PHE n 2 102 ASN n 2 103 CYS n 2 104 SER n 2 105 LEU n 2 106 CYS n 2 107 LEU n 2 108 ASN n 2 109 GLY n 2 110 THR n 2 111 VAL n 2 112 HIS n 2 113 LEU n 2 114 SER n 2 115 CYS n 2 116 GLN n 2 117 GLU n 2 118 LYS n 2 119 GLN n 2 120 ASN n 2 121 THR n 2 122 VAL n 2 123 CYS n 2 124 THR n 2 125 CYS n 2 126 HIS n 2 127 ALA n 2 128 GLY n 2 129 PHE n 2 130 PHE n 2 131 LEU n 2 132 ARG n 2 133 GLU n 2 134 ASN n 2 135 GLU n 2 136 CYS n 2 137 VAL n 2 138 SER n 2 139 CYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human Homo ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? human Homo ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'SF9 cells' ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP TNFB_HUMAN 1 P01374 1 ;MTPPERLFLPRVCGTTLHLLLLGLLLVLLPGAQGLPGVGLTPSAAQTARQHPKMHLAHSTLKPAAHLIGDPSKQNSLLWR ANTDRAFLQDGFSLSNNSLLVPTSGIYFVYSQVVFSGKAYSPKATSSPLYLAHEVQLFSSQYPFHVPLLSSQKMVYPGLQ EPWLHSMYHGAAFQLTQGDQLSTHTDGIPHLVLSPSTVFFGAFAL ; ? 2 UNP TNR1A_HUMAN 2 P19438 1 ;MGLSTVPDLLLPLVLLELLVGIYPSGVIGLVPHLGDREKRDSVCPQGKYIHPQNNSICCTKCHKGTYLYNDCPGPGQDTD CRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNGTVHLSCQE KQNTVCTCHAGFFLRENECVSCSNCKKSLECTKLCLPQIENVKGTEDSGTTVLLPLVIFFGLCLLSLLFIGLMYRYQRWK SKLYSIVCGKSTPEKEGELEGTTTKPLAPNPSFSPTPGFTPTLGFSPVPSSTFTSSSTYTPGDCPNFAAPRREVAPPYQG ADPILATALASDPIPNPLQKWEDSAHKPQSLDTDDPATLYAVVENVPPLRWKEFVRRLGLSDHEIDRLELQNGRCLREAQ YSMLATWRRRTPRREATLELLGRVLRDMDLLGCLEDIEEALCGPAALPPAPSLLR ; ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1TNR A 1 ? 144 ? P01374 62 ? 205 ? 28 171 2 2 1TNR R 1 ? 139 ? P19438 44 ? 182 ? 15 153 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1TNR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.07 _exptl_crystal.density_percent_sol 69.75 _exptl_crystal.description ? # _refine.entry_id 1TNR _refine.ls_number_reflns_obs 11513 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.0 _refine.ls_d_res_high 2.85 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.16 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.16 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;THE RECEPTOR REGIONS R 15 - R 29 AND R 144 - R 153, I.E. THE N- AND C-TERMINAL ENDS OF THE RECEPTOR, MUST BE REGARDED AS TENTATIVE. THERE IS WEAK ELECTRON DENSITY FOR THE THREE CARBOHYDRATE CHAINS ATTACHED TO ASPARAGINES R 25, R 116 AND R 122. THESE POSITIONS HAVE BEEN MARKED WITH WATER MOLECULES 45, 42 AND 43, RESPECTIVELY. ASPARTIC ACID A 50 ADOPTS THE UNUSUAL EPSILON CONFORMATION ON BINDING THE RECEPTOR. THE PEPTIDE PLANES A 40 - A 41 AND R 100 - R 101 MAY HAVE THE WRONG ORIENTATION. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2208 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 46 _refine_hist.number_atoms_total 2254 _refine_hist.d_res_high 2.85 _refine_hist.d_res_low 50.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.012 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.8 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1TNR _struct.title 'CRYSTAL STRUCTURE OF THE SOLUBLE HUMAN 55 KD TNF RECEPTOR-HUMAN TNF-BETA COMPLEX: IMPLICATIONS FOR TNF RECEPTOR ACTIVATION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1TNR _struct_keywords.pdbx_keywords 'COMPLEX(LYMPHOKINE/RECEPTOR)' _struct_keywords.text 'COMPLEX(LYMPHOKINE-RECEPTOR), COMPLEX(LYMPHOKINE-RECEPTOR) complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 60 ? SER A 65 ? SER A 87 SER A 92 5 ? 6 HELX_P HELX_P2 2 GLY A 126 ? HIS A 129 ? GLY A 153 HIS A 156 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? B CYS 1 SG ? ? ? 1_555 B CYS 15 SG ? ? R CYS 15 R CYS 29 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf2 disulf ? ? B CYS 16 SG ? ? ? 1_555 B CYS 29 SG ? ? R CYS 30 R CYS 43 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf3 disulf ? ? B CYS 19 SG ? ? ? 1_555 B CYS 38 SG ? ? R CYS 33 R CYS 52 1_555 ? ? ? ? ? ? ? 2.024 ? ? disulf4 disulf ? ? B CYS 41 SG ? ? ? 1_555 B CYS 56 SG ? ? R CYS 55 R CYS 70 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf5 disulf ? ? B CYS 59 SG ? ? ? 1_555 B CYS 74 SG ? ? R CYS 73 R CYS 88 1_555 ? ? ? ? ? ? ? 2.015 ? ? disulf6 disulf ? ? B CYS 62 SG ? ? ? 1_555 B CYS 82 SG ? ? R CYS 76 R CYS 96 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf7 disulf ? ? B CYS 84 SG ? ? ? 1_555 B CYS 100 SG ? ? R CYS 98 R CYS 114 1_555 ? ? ? ? ? ? ? 2.026 ? ? disulf8 disulf ? ? B CYS 103 SG ? ? ? 1_555 B CYS 115 SG ? ? R CYS 117 R CYS 129 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf9 disulf ? ? B CYS 106 SG ? ? ? 1_555 B CYS 123 SG ? ? R CYS 120 R CYS 137 1_555 ? ? ? ? ? ? ? 2.016 ? ? disulf10 disulf ? ? B CYS 125 SG ? ? ? 1_555 B CYS 136 SG ? ? R CYS 139 R CYS 150 1_555 ? ? ? ? ? ? ? 2.026 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TRP A 102 ? LEU A 114 ? TRP A 129 LEU A 141 A 2 GLY A 44 ? GLY A 56 ? GLY A 71 GLY A 83 A 3 PHE A 138 ? ALA A 143 ? PHE A 165 ALA A 170 A 4 ALA A 3 ? GLY A 8 ? ALA A 30 GLY A 35 A 5 TRP A 18 ? ARG A 19 ? TRP A 45 ARG A 46 B 1 TRP A 102 ? LEU A 114 ? TRP A 129 LEU A 141 B 2 GLY A 44 ? GLY A 56 ? GLY A 71 GLY A 83 B 3 PHE A 138 ? ALA A 143 ? PHE A 165 ALA A 170 B 4 ALA A 3 ? GLY A 8 ? ALA A 30 GLY A 35 B 5 PHE A 26 ? GLN A 28 ? PHE A 53 GLN A 55 C 1 SER A 32 ? SER A 34 ? SER A 59 SER A 61 C 2 SER A 37 ? LEU A 39 ? SER A 64 LEU A 66 C 3 GLN A 119 ? ASP A 125 ? GLN A 146 ASP A 152 C 4 LEU A 68 ? PHE A 77 ? LEU A 95 PHE A 104 C 5 VAL A 85 ? VAL A 94 ? VAL A 112 VAL A 121 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 114 ? N LEU A 141 O GLY A 44 ? O GLY A 71 A 2 3 N GLN A 51 ? N GLN A 78 O PHE A 138 ? O PHE A 165 A 3 4 O ALA A 141 ? O ALA A 168 N ALA A 4 ? N ALA A 31 A 4 5 O ILE A 7 ? O ILE A 34 N ARG A 19 ? N ARG A 46 B 1 2 N LEU A 114 ? N LEU A 141 O GLY A 44 ? O GLY A 71 B 2 3 N GLN A 51 ? N GLN A 78 O PHE A 138 ? O PHE A 165 B 3 4 O ALA A 141 ? O ALA A 168 N ALA A 4 ? N ALA A 31 B 4 5 O HIS A 5 ? O HIS A 32 N PHE A 26 ? N PHE A 53 C 1 2 O SER A 34 ? O SER A 61 N SER A 37 ? N SER A 64 C 2 3 O LEU A 38 ? O LEU A 65 N LEU A 120 ? N LEU A 147 C 3 4 N ASP A 125 ? N ASP A 152 O ALA A 71 ? O ALA A 98 C 4 5 N LEU A 76 ? N LEU A 103 O VAL A 85 ? O VAL A 112 # _database_PDB_matrix.entry_id 1TNR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1TNR _atom_sites.fract_transf_matrix[1][1] 0.006866 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006866 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006866 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 28 28 LYS LYS A . n A 1 2 PRO 2 29 29 PRO PRO A . n A 1 3 ALA 3 30 30 ALA ALA A . n A 1 4 ALA 4 31 31 ALA ALA A . n A 1 5 HIS 5 32 32 HIS HIS A . n A 1 6 LEU 6 33 33 LEU LEU A . n A 1 7 ILE 7 34 34 ILE ILE A . n A 1 8 GLY 8 35 35 GLY GLY A . n A 1 9 ASP 9 36 36 ASP ASP A . n A 1 10 PRO 10 37 37 PRO PRO A . n A 1 11 SER 11 38 38 SER SER A . n A 1 12 LYS 12 39 39 LYS LYS A . n A 1 13 GLN 13 40 40 GLN GLN A . n A 1 14 ASN 14 41 41 ASN ASN A . n A 1 15 SER 15 42 42 SER SER A . n A 1 16 LEU 16 43 43 LEU LEU A . n A 1 17 LEU 17 44 44 LEU LEU A . n A 1 18 TRP 18 45 45 TRP TRP A . n A 1 19 ARG 19 46 46 ARG ARG A . n A 1 20 ALA 20 47 47 ALA ALA A . n A 1 21 ASN 21 48 48 ASN ASN A . n A 1 22 THR 22 49 49 THR THR A . n A 1 23 ASP 23 50 50 ASP ASP A . n A 1 24 ARG 24 51 51 ARG ARG A . n A 1 25 ALA 25 52 52 ALA ALA A . n A 1 26 PHE 26 53 53 PHE PHE A . n A 1 27 LEU 27 54 54 LEU LEU A . n A 1 28 GLN 28 55 55 GLN GLN A . n A 1 29 ASP 29 56 56 ASP ASP A . n A 1 30 GLY 30 57 57 GLY GLY A . n A 1 31 PHE 31 58 58 PHE PHE A . n A 1 32 SER 32 59 59 SER SER A . n A 1 33 LEU 33 60 60 LEU LEU A . n A 1 34 SER 34 61 61 SER SER A . n A 1 35 ASN 35 62 62 ASN ASN A . n A 1 36 ASN 36 63 63 ASN ASN A . n A 1 37 SER 37 64 64 SER SER A . n A 1 38 LEU 38 65 65 LEU LEU A . n A 1 39 LEU 39 66 66 LEU LEU A . n A 1 40 VAL 40 67 67 VAL VAL A . n A 1 41 PRO 41 68 68 PRO PRO A . n A 1 42 THR 42 69 69 THR THR A . n A 1 43 SER 43 70 70 SER SER A . n A 1 44 GLY 44 71 71 GLY GLY A . n A 1 45 ILE 45 72 72 ILE ILE A . n A 1 46 TYR 46 73 73 TYR TYR A . n A 1 47 PHE 47 74 74 PHE PHE A . n A 1 48 VAL 48 75 75 VAL VAL A . n A 1 49 TYR 49 76 76 TYR TYR A . n A 1 50 SER 50 77 77 SER SER A . n A 1 51 GLN 51 78 78 GLN GLN A . n A 1 52 VAL 52 79 79 VAL VAL A . n A 1 53 VAL 53 80 80 VAL VAL A . n A 1 54 PHE 54 81 81 PHE PHE A . n A 1 55 SER 55 82 82 SER SER A . n A 1 56 GLY 56 83 83 GLY GLY A . n A 1 57 LYS 57 84 84 LYS LYS A . n A 1 58 ALA 58 85 85 ALA ALA A . n A 1 59 TYR 59 86 86 TYR TYR A . n A 1 60 SER 60 87 87 SER SER A . n A 1 61 PRO 61 88 88 PRO PRO A . n A 1 62 LYS 62 89 89 LYS LYS A . n A 1 63 ALA 63 90 90 ALA ALA A . n A 1 64 THR 64 91 91 THR THR A . n A 1 65 SER 65 92 92 SER SER A . n A 1 66 SER 66 93 93 SER SER A . n A 1 67 PRO 67 94 94 PRO PRO A . n A 1 68 LEU 68 95 95 LEU LEU A . n A 1 69 TYR 69 96 96 TYR TYR A . n A 1 70 LEU 70 97 97 LEU LEU A . n A 1 71 ALA 71 98 98 ALA ALA A . n A 1 72 HIS 72 99 99 HIS HIS A . n A 1 73 GLU 73 100 100 GLU GLU A . n A 1 74 VAL 74 101 101 VAL VAL A . n A 1 75 GLN 75 102 102 GLN GLN A . n A 1 76 LEU 76 103 103 LEU LEU A . n A 1 77 PHE 77 104 104 PHE PHE A . n A 1 78 SER 78 105 105 SER SER A . n A 1 79 SER 79 106 106 SER SER A . n A 1 80 GLN 80 107 107 GLN GLN A . n A 1 81 TYR 81 108 108 TYR TYR A . n A 1 82 PRO 82 109 109 PRO PRO A . n A 1 83 PHE 83 110 110 PHE PHE A . n A 1 84 HIS 84 111 111 HIS HIS A . n A 1 85 VAL 85 112 112 VAL VAL A . n A 1 86 PRO 86 113 113 PRO PRO A . n A 1 87 LEU 87 114 114 LEU LEU A . n A 1 88 LEU 88 115 115 LEU LEU A . n A 1 89 SER 89 116 116 SER SER A . n A 1 90 SER 90 117 117 SER SER A . n A 1 91 GLN 91 118 118 GLN GLN A . n A 1 92 LYS 92 119 119 LYS LYS A . n A 1 93 MET 93 120 120 MET MET A . n A 1 94 VAL 94 121 121 VAL VAL A . n A 1 95 TYR 95 122 122 TYR TYR A . n A 1 96 PRO 96 123 123 PRO PRO A . n A 1 97 GLY 97 124 124 GLY GLY A . n A 1 98 LEU 98 125 125 LEU LEU A . n A 1 99 GLN 99 126 126 GLN GLN A . n A 1 100 GLU 100 127 127 GLU GLU A . n A 1 101 PRO 101 128 128 PRO PRO A . n A 1 102 TRP 102 129 129 TRP TRP A . n A 1 103 LEU 103 130 130 LEU LEU A . n A 1 104 HIS 104 131 131 HIS HIS A . n A 1 105 SER 105 132 132 SER SER A . n A 1 106 MET 106 133 133 MET MET A . n A 1 107 TYR 107 134 134 TYR TYR A . n A 1 108 HIS 108 135 135 HIS HIS A . n A 1 109 GLY 109 136 136 GLY GLY A . n A 1 110 ALA 110 137 137 ALA ALA A . n A 1 111 ALA 111 138 138 ALA ALA A . n A 1 112 PHE 112 139 139 PHE PHE A . n A 1 113 GLN 113 140 140 GLN GLN A . n A 1 114 LEU 114 141 141 LEU LEU A . n A 1 115 THR 115 142 142 THR THR A . n A 1 116 GLN 116 143 143 GLN GLN A . n A 1 117 GLY 117 144 144 GLY GLY A . n A 1 118 ASP 118 145 145 ASP ASP A . n A 1 119 GLN 119 146 146 GLN GLN A . n A 1 120 LEU 120 147 147 LEU LEU A . n A 1 121 SER 121 148 148 SER SER A . n A 1 122 THR 122 149 149 THR THR A . n A 1 123 HIS 123 150 150 HIS HIS A . n A 1 124 THR 124 151 151 THR THR A . n A 1 125 ASP 125 152 152 ASP ASP A . n A 1 126 GLY 126 153 153 GLY GLY A . n A 1 127 ILE 127 154 154 ILE ILE A . n A 1 128 PRO 128 155 155 PRO PRO A . n A 1 129 HIS 129 156 156 HIS HIS A . n A 1 130 LEU 130 157 157 LEU LEU A . n A 1 131 VAL 131 158 158 VAL VAL A . n A 1 132 LEU 132 159 159 LEU LEU A . n A 1 133 SER 133 160 160 SER SER A . n A 1 134 PRO 134 161 161 PRO PRO A . n A 1 135 SER 135 162 162 SER SER A . n A 1 136 THR 136 163 163 THR THR A . n A 1 137 VAL 137 164 164 VAL VAL A . n A 1 138 PHE 138 165 165 PHE PHE A . n A 1 139 PHE 139 166 166 PHE PHE A . n A 1 140 GLY 140 167 167 GLY GLY A . n A 1 141 ALA 141 168 168 ALA ALA A . n A 1 142 PHE 142 169 169 PHE PHE A . n A 1 143 ALA 143 170 170 ALA ALA A . n A 1 144 LEU 144 171 171 LEU LEU A . n B 2 1 CYS 1 15 15 CYS CYS R . n B 2 2 PRO 2 16 16 PRO PRO R . n B 2 3 GLN 3 17 17 GLN GLN R . n B 2 4 GLY 4 18 18 GLY GLY R . n B 2 5 LYS 5 19 19 LYS LYS R . n B 2 6 TYR 6 20 20 TYR TYR R . n B 2 7 ILE 7 21 21 ILE ILE R . n B 2 8 HIS 8 22 22 HIS HIS R . n B 2 9 PRO 9 23 23 PRO PRO R . n B 2 10 GLN 10 24 24 GLN GLN R . n B 2 11 ASN 11 25 25 ASN ASN R . n B 2 12 ASN 12 26 26 ASN ASN R . n B 2 13 SER 13 27 27 SER SER R . n B 2 14 ILE 14 28 28 ILE ILE R . n B 2 15 CYS 15 29 29 CYS CYS R . n B 2 16 CYS 16 30 30 CYS CYS R . n B 2 17 THR 17 31 31 THR THR R . n B 2 18 LYS 18 32 32 LYS LYS R . n B 2 19 CYS 19 33 33 CYS CYS R . n B 2 20 HIS 20 34 34 HIS HIS R . n B 2 21 LYS 21 35 35 LYS LYS R . n B 2 22 GLY 22 36 36 GLY GLY R . n B 2 23 THR 23 37 37 THR THR R . n B 2 24 TYR 24 38 38 TYR TYR R . n B 2 25 LEU 25 39 39 LEU LEU R . n B 2 26 TYR 26 40 40 TYR TYR R . n B 2 27 ASN 27 41 41 ASN ASN R . n B 2 28 ASP 28 42 42 ASP ASP R . n B 2 29 CYS 29 43 43 CYS CYS R . n B 2 30 PRO 30 44 44 PRO PRO R . n B 2 31 GLY 31 45 45 GLY GLY R . n B 2 32 PRO 32 46 46 PRO PRO R . n B 2 33 GLY 33 47 47 GLY GLY R . n B 2 34 GLN 34 48 48 GLN GLN R . n B 2 35 ASP 35 49 49 ASP ASP R . n B 2 36 THR 36 50 50 THR THR R . n B 2 37 ASP 37 51 51 ASP ASP R . n B 2 38 CYS 38 52 52 CYS CYS R . n B 2 39 ARG 39 53 53 ARG ARG R . n B 2 40 GLU 40 54 54 GLU GLU R . n B 2 41 CYS 41 55 55 CYS CYS R . n B 2 42 GLU 42 56 56 GLU GLU R . n B 2 43 SER 43 57 57 SER SER R . n B 2 44 GLY 44 58 58 GLY GLY R . n B 2 45 SER 45 59 59 SER SER R . n B 2 46 PHE 46 60 60 PHE PHE R . n B 2 47 THR 47 61 61 THR THR R . n B 2 48 ALA 48 62 62 ALA ALA R . n B 2 49 SER 49 63 63 SER SER R . n B 2 50 GLU 50 64 64 GLU GLU R . n B 2 51 ASN 51 65 65 ASN ASN R . n B 2 52 HIS 52 66 66 HIS HIS R . n B 2 53 LEU 53 67 67 LEU LEU R . n B 2 54 ARG 54 68 68 ARG ARG R . n B 2 55 HIS 55 69 69 HIS HIS R . n B 2 56 CYS 56 70 70 CYS CYS R . n B 2 57 LEU 57 71 71 LEU LEU R . n B 2 58 SER 58 72 72 SER SER R . n B 2 59 CYS 59 73 73 CYS CYS R . n B 2 60 SER 60 74 74 SER SER R . n B 2 61 LYS 61 75 75 LYS LYS R . n B 2 62 CYS 62 76 76 CYS CYS R . n B 2 63 ARG 63 77 77 ARG ARG R . n B 2 64 LYS 64 78 78 LYS LYS R . n B 2 65 GLU 65 79 79 GLU GLU R . n B 2 66 MET 66 80 80 MET MET R . n B 2 67 GLY 67 81 81 GLY GLY R . n B 2 68 GLN 68 82 82 GLN GLN R . n B 2 69 VAL 69 83 83 VAL VAL R . n B 2 70 GLU 70 84 84 GLU GLU R . n B 2 71 ILE 71 85 85 ILE ILE R . n B 2 72 SER 72 86 86 SER SER R . n B 2 73 SER 73 87 87 SER SER R . n B 2 74 CYS 74 88 88 CYS CYS R . n B 2 75 THR 75 89 89 THR THR R . n B 2 76 VAL 76 90 90 VAL VAL R . n B 2 77 ASP 77 91 91 ASP ASP R . n B 2 78 ARG 78 92 92 ARG ARG R . n B 2 79 ASP 79 93 93 ASP ASP R . n B 2 80 THR 80 94 94 THR THR R . n B 2 81 VAL 81 95 95 VAL VAL R . n B 2 82 CYS 82 96 96 CYS CYS R . n B 2 83 GLY 83 97 97 GLY GLY R . n B 2 84 CYS 84 98 98 CYS CYS R . n B 2 85 ARG 85 99 99 ARG ARG R . n B 2 86 LYS 86 100 100 LYS LYS R . n B 2 87 ASN 87 101 101 ASN ASN R . n B 2 88 GLN 88 102 102 GLN GLN R . n B 2 89 TYR 89 103 103 TYR TYR R . n B 2 90 ARG 90 104 104 ARG ARG R . n B 2 91 HIS 91 105 105 HIS HIS R . n B 2 92 TYR 92 106 106 TYR TYR R . n B 2 93 TRP 93 107 107 TRP TRP R . n B 2 94 SER 94 108 108 SER SER R . n B 2 95 GLU 95 109 109 GLU GLU R . n B 2 96 ASN 96 110 110 ASN ASN R . n B 2 97 LEU 97 111 111 LEU LEU R . n B 2 98 PHE 98 112 112 PHE PHE R . n B 2 99 GLN 99 113 113 GLN GLN R . n B 2 100 CYS 100 114 114 CYS CYS R . n B 2 101 PHE 101 115 115 PHE PHE R . n B 2 102 ASN 102 116 116 ASN ASN R . n B 2 103 CYS 103 117 117 CYS CYS R . n B 2 104 SER 104 118 118 SER SER R . n B 2 105 LEU 105 119 119 LEU LEU R . n B 2 106 CYS 106 120 120 CYS CYS R . n B 2 107 LEU 107 121 121 LEU LEU R . n B 2 108 ASN 108 122 122 ASN ASN R . n B 2 109 GLY 109 123 123 GLY GLY R . n B 2 110 THR 110 124 124 THR THR R . n B 2 111 VAL 111 125 125 VAL VAL R . n B 2 112 HIS 112 126 126 HIS HIS R . n B 2 113 LEU 113 127 127 LEU LEU R . n B 2 114 SER 114 128 128 SER SER R . n B 2 115 CYS 115 129 129 CYS CYS R . n B 2 116 GLN 116 130 130 GLN GLN R . n B 2 117 GLU 117 131 131 GLU GLU R . n B 2 118 LYS 118 132 132 LYS LYS R . n B 2 119 GLN 119 133 133 GLN GLN R . n B 2 120 ASN 120 134 134 ASN ASN R . n B 2 121 THR 121 135 135 THR THR R . n B 2 122 VAL 122 136 136 VAL VAL R . n B 2 123 CYS 123 137 137 CYS CYS R . n B 2 124 THR 124 138 138 THR THR R . n B 2 125 CYS 125 139 139 CYS CYS R . n B 2 126 HIS 126 140 140 HIS HIS R . n B 2 127 ALA 127 141 141 ALA ALA R . n B 2 128 GLY 128 142 142 GLY GLY R . n B 2 129 PHE 129 143 143 PHE PHE R . n B 2 130 PHE 130 144 144 PHE PHE R . n B 2 131 LEU 131 145 145 LEU LEU R . n B 2 132 ARG 132 146 146 ARG ARG R . n B 2 133 GLU 133 147 147 GLU GLU R . n B 2 134 ASN 134 148 148 ASN ASN R . n B 2 135 GLU 135 149 149 GLU GLU R . n B 2 136 CYS 136 150 150 CYS CYS R . n B 2 137 VAL 137 151 151 VAL VAL R . n B 2 138 SER 138 152 152 SER SER R . n B 2 139 CYS 139 153 153 CYS CYS R . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 172 1 HOH HOH A . C 3 HOH 2 173 3 HOH HOH A . C 3 HOH 3 174 4 HOH HOH A . C 3 HOH 4 175 5 HOH HOH A . C 3 HOH 5 176 6 HOH HOH A . C 3 HOH 6 177 7 HOH HOH A . C 3 HOH 7 178 8 HOH HOH A . C 3 HOH 8 179 10 HOH HOH A . C 3 HOH 9 180 12 HOH HOH A . C 3 HOH 10 181 13 HOH HOH A . C 3 HOH 11 182 16 HOH HOH A . C 3 HOH 12 183 17 HOH HOH A . C 3 HOH 13 184 18 HOH HOH A . C 3 HOH 14 185 19 HOH HOH A . C 3 HOH 15 186 22 HOH HOH A . C 3 HOH 16 187 25 HOH HOH A . C 3 HOH 17 188 26 HOH HOH A . C 3 HOH 18 189 27 HOH HOH A . C 3 HOH 19 190 28 HOH HOH A . C 3 HOH 20 191 29 HOH HOH A . C 3 HOH 21 192 30 HOH HOH A . C 3 HOH 22 193 31 HOH HOH A . C 3 HOH 23 194 33 HOH HOH A . C 3 HOH 24 195 34 HOH HOH A . C 3 HOH 25 196 35 HOH HOH A . C 3 HOH 26 197 36 HOH HOH A . C 3 HOH 27 198 37 HOH HOH A . C 3 HOH 28 199 38 HOH HOH A . C 3 HOH 29 200 44 HOH HOH A . D 3 HOH 1 154 2 HOH HOH R . D 3 HOH 2 155 9 HOH HOH R . D 3 HOH 3 156 11 HOH HOH R . D 3 HOH 4 157 14 HOH HOH R . D 3 HOH 5 158 15 HOH HOH R . D 3 HOH 6 159 20 HOH HOH R . D 3 HOH 7 160 21 HOH HOH R . D 3 HOH 8 161 23 HOH HOH R . D 3 HOH 9 162 24 HOH HOH R . D 3 HOH 10 163 32 HOH HOH R . D 3 HOH 11 164 39 HOH HOH R . D 3 HOH 12 165 40 HOH HOH R . D 3 HOH 13 166 41 HOH HOH R . D 3 HOH 14 167 42 HOH HOH R . D 3 HOH 15 168 43 HOH HOH R . D 3 HOH 16 169 45 HOH HOH R . D 3 HOH 17 170 46 HOH HOH R . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 12540 ? 1 MORE -52 ? 1 'SSA (A^2)' 40120 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 z,x,y 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 3 'crystal symmetry operation' 9_555 y,z,x 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1994-07-31 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-08-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' citation_author 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_struct_assembly 6 4 'Structure model' pdbx_struct_assembly_gen 7 4 'Structure model' pdbx_struct_assembly_prop 8 4 'Structure model' pdbx_struct_oper_list 9 4 'Structure model' struct_biol # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.page_last' 2 4 'Structure model' '_citation.pdbx_database_id_DOI' 3 4 'Structure model' '_citation.pdbx_database_id_PubMed' 4 4 'Structure model' '_citation.title' 5 4 'Structure model' '_citation_author.name' 6 4 'Structure model' '_database_2.pdbx_DOI' 7 4 'Structure model' '_database_2.pdbx_database_accession' 8 4 'Structure model' '_pdbx_database_status.process_site' 9 4 'Structure model' '_pdbx_struct_assembly.details' 10 4 'Structure model' '_pdbx_struct_assembly.method_details' 11 4 'Structure model' '_pdbx_struct_assembly.oligomeric_count' 12 4 'Structure model' '_pdbx_struct_assembly.oligomeric_details' 13 4 'Structure model' '_pdbx_struct_assembly_gen.oper_expression' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 X-PLOR phasing . ? 3 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 50 ? ? 53.79 -138.81 2 1 ASN A 62 ? ? 17.36 60.87 3 1 ASN A 63 ? ? 49.19 27.68 4 1 LYS A 84 ? ? -162.30 103.10 5 1 GLN A 126 ? ? 79.36 -11.24 6 1 ASN R 25 ? ? -175.01 92.75 7 1 SER R 27 ? ? 80.80 1.16 8 1 ILE R 28 ? ? -112.46 70.00 9 1 CYS R 29 ? ? -67.53 89.95 10 1 LYS R 35 ? ? -38.27 144.09 11 1 ALA R 62 ? ? -106.97 42.64 12 1 SER R 63 ? ? -179.74 -179.97 13 1 VAL R 90 ? ? -58.38 -4.47 14 1 ASP R 91 ? ? -140.54 -2.76 15 1 ASN R 101 ? ? 112.85 -4.00 16 1 GLU R 109 ? ? -53.28 -9.48 17 1 CYS R 120 ? ? 71.47 43.30 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A TYR 86 ? CE1 ? A TYR 59 CE1 2 1 Y 0 A TYR 86 ? CE2 ? A TYR 59 CE2 3 1 Y 0 A TYR 86 ? CZ ? A TYR 59 CZ 4 1 Y 0 A TYR 86 ? OH ? A TYR 59 OH 5 1 Y 0 A LYS 89 ? CG ? A LYS 62 CG 6 1 Y 0 A LYS 89 ? CD ? A LYS 62 CD 7 1 Y 0 A LYS 89 ? CE ? A LYS 62 CE 8 1 Y 0 A LYS 89 ? NZ ? A LYS 62 NZ 9 1 Y 1 R GLU 109 ? CG ? B GLU 95 CG 10 1 Y 1 R GLU 109 ? CD ? B GLU 95 CD 11 1 Y 1 R GLU 109 ? OE1 ? B GLU 95 OE1 12 1 Y 1 R GLU 109 ? OE2 ? B GLU 95 OE2 13 1 Y 0 R PHE 144 ? CB ? B PHE 130 CB 14 1 Y 0 R PHE 144 ? CG ? B PHE 130 CG 15 1 Y 0 R PHE 144 ? CD1 ? B PHE 130 CD1 16 1 Y 0 R PHE 144 ? CD2 ? B PHE 130 CD2 17 1 Y 0 R PHE 144 ? CE1 ? B PHE 130 CE1 18 1 Y 0 R PHE 144 ? CE2 ? B PHE 130 CE2 19 1 Y 0 R PHE 144 ? CZ ? B PHE 130 CZ 20 1 Y 0 R LEU 145 ? CB ? B LEU 131 CB 21 1 Y 0 R LEU 145 ? CG ? B LEU 131 CG 22 1 Y 0 R LEU 145 ? CD1 ? B LEU 131 CD1 23 1 Y 0 R LEU 145 ? CD2 ? B LEU 131 CD2 24 1 Y 0 R ARG 146 ? CB ? B ARG 132 CB 25 1 Y 0 R ARG 146 ? CG ? B ARG 132 CG 26 1 Y 0 R ARG 146 ? CD ? B ARG 132 CD 27 1 Y 0 R ARG 146 ? NE ? B ARG 132 NE 28 1 Y 0 R ARG 146 ? CZ ? B ARG 132 CZ 29 1 Y 0 R ARG 146 ? NH1 ? B ARG 132 NH1 30 1 Y 0 R ARG 146 ? NH2 ? B ARG 132 NH2 31 1 Y 0 R GLU 147 ? CB ? B GLU 133 CB 32 1 Y 0 R GLU 147 ? CG ? B GLU 133 CG 33 1 Y 0 R GLU 147 ? CD ? B GLU 133 CD 34 1 Y 0 R GLU 147 ? OE1 ? B GLU 133 OE1 35 1 Y 0 R GLU 147 ? OE2 ? B GLU 133 OE2 36 1 Y 0 R ASN 148 ? CB ? B ASN 134 CB 37 1 Y 0 R ASN 148 ? CG ? B ASN 134 CG 38 1 Y 0 R ASN 148 ? OD1 ? B ASN 134 OD1 39 1 Y 0 R ASN 148 ? ND2 ? B ASN 134 ND2 40 1 Y 0 R VAL 151 ? CB ? B VAL 137 CB 41 1 Y 0 R VAL 151 ? CG1 ? B VAL 137 CG1 42 1 Y 0 R VAL 151 ? CG2 ? B VAL 137 CG2 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #