HEADER OXIDOREDUCTASE 12-JUN-04 1TO5 TITLE STRUCTURE OF THE CYTOSOLIC CU,ZN SOD FROM S. MANSONI COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPEROXIDE DISMUTASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 1.15.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHISTOSOMA MANSONI; SOURCE 3 ORGANISM_TAXID: 6183; SOURCE 4 GENE: SOD; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX-4T-1 KEYWDS BETA-BARREL, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR R.M.F.CARDOSO,C.H.T.P.SILVA,A.P.ULIAN DE ARAUJO,T.TANAKA, AUTHOR 2 M.TANAKA,R.C.GARRATT REVDAT 2 24-FEB-09 1TO5 1 VERSN REVDAT 1 31-AUG-04 1TO5 0 JRNL AUTH R.M.CARDOSO,C.H.SILVA,A.P.ULIAN DE ARAUJO,T.TANAKA, JRNL AUTH 2 M.TANAKA,R.C.GARRATT JRNL TITL STRUCTURE OF THE CYTOSOLIC CU,ZN SUPEROXIDE JRNL TITL 2 DISMUTASE FROM SCHISTOSOMA MANSONI. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 60 1569 2004 JRNL REFN ISSN 0907-4449 JRNL PMID 15333927 JRNL DOI 10.1107/S0907444904016798 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.M.F.CARDOSO,C.H.T.P.SILVA,A.P.U.ARAUJO,T.TANAKA, REMARK 1 AUTH 2 M.TANAKA,R.C.G.GARRATT REMARK 1 TITL EXPRESSION AND PRELIMINARY X-RAY DIFFRACTION REMARK 1 TITL 2 STUDIES OF CYTOSOLIC CU,ZN SUPEROXIDE DISMUTASE REMARK 1 TITL 3 FROM SCHISTOSOMA MANSONI REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 57 1877 2001 REMARK 1 REFN ISSN 0907-4449 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 86.8 REMARK 3 NUMBER OF REFLECTIONS : 25185 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1289 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.34 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 77.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1940 REMARK 3 BIN FREE R VALUE : 0.2930 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 195 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.021 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4478 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 609 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.52000 REMARK 3 B22 (A**2) : 0.75000 REMARK 3 B33 (A**2) : -2.28000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM SIGMAA (A) : 0.15 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.24 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.004 REMARK 3 BOND ANGLES (DEGREES) : 1.30 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.60 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.240 ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.900 ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : 1.910 ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.610 ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1TO5 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JUL-04. REMARK 100 THE RCSB ID CODE IS RCSB022789. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JAN-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5408 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS II REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25229 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 60.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.5 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08000 REMARK 200 FOR THE DATA SET : 17.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 72.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.17200 REMARK 200 FOR SHELL : 6.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 4000, 0.2 M AMMONIUM REMARK 280 ACETATE, 0.1 M SODIUM ACETATE PH 4.6, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.32000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.59000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.12000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.59000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.32000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.12000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMMETRIC UNIT CONTAINS TWO CU,ZN SOD BIOLOGICAL REMARK 300 DIMERS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -37.32000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 39.12000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 GLY A -3 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 VAL A 147 CG1 CG2 REMARK 480 GLU C 153 CB CG REMARK 480 GLY D -3 N CA REMARK 480 ASN D 54 OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP D 24 -62.21 -28.85 REMARK 500 ARG D 114 -169.30 -107.36 REMARK 500 HIS D 130 -141.59 -119.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 711 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 62 ND1 REMARK 620 2 HIS A 70 ND1 113.4 REMARK 620 3 HIS A 79 ND1 101.0 120.9 REMARK 620 4 ASP A 82 OD1 110.1 93.1 118.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 712 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 45 ND1 REMARK 620 2 HIS A 119 NE2 101.7 REMARK 620 3 HIS A 47 NE2 144.8 112.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 721 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 82 OD1 REMARK 620 2 HIS B 62 ND1 103.7 REMARK 620 3 HIS B 70 ND1 95.1 106.7 REMARK 620 4 HIS B 79 ND1 116.8 110.6 121.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 722 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 45 ND1 REMARK 620 2 HIS B 47 NE2 143.0 REMARK 620 3 HIS B 119 NE2 98.9 117.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 731 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 79 ND1 REMARK 620 2 HIS C 62 ND1 106.5 REMARK 620 3 ASP C 82 OD1 113.9 105.4 REMARK 620 4 HIS C 70 ND1 123.5 109.1 97.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU C 732 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 47 NE2 REMARK 620 2 HIS C 45 ND1 142.0 REMARK 620 3 HIS C 119 NE2 119.2 98.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 741 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 62 ND1 REMARK 620 2 ASP D 82 OD1 109.0 REMARK 620 3 HIS D 70 ND1 107.7 97.3 REMARK 620 4 HIS D 79 ND1 103.8 115.8 122.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU D 742 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 47 NE2 REMARK 620 2 HIS D 119 NE2 121.5 REMARK 620 3 HIS D 45 ND1 137.7 100.4 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 711 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 712 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 721 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 722 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 731 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU C 732 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 741 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU D 742 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 701 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1TO4 RELATED DB: PDB REMARK 900 HIGHER RESOLUTION STRUCTURE DBREF 1TO5 A 1 153 UNP Q01137 SODC_SCHMA 1 153 DBREF 1TO5 B 1 153 UNP Q01137 SODC_SCHMA 1 153 DBREF 1TO5 C 1 153 UNP Q01137 SODC_SCHMA 1 153 DBREF 1TO5 D 1 153 UNP Q01137 SODC_SCHMA 1 153 SEQADV 1TO5 GLY A -3 UNP Q01137 CLONING ARTIFACT SEQADV 1TO5 SER A -2 UNP Q01137 CLONING ARTIFACT SEQADV 1TO5 ASN A -1 UNP Q01137 CLONING ARTIFACT SEQADV 1TO5 GLY B -3 UNP Q01137 CLONING ARTIFACT SEQADV 1TO5 SER B -2 UNP Q01137 CLONING ARTIFACT SEQADV 1TO5 ASN B -1 UNP Q01137 CLONING ARTIFACT SEQADV 1TO5 GLY C -3 UNP Q01137 CLONING ARTIFACT SEQADV 1TO5 SER C -2 UNP Q01137 CLONING ARTIFACT SEQADV 1TO5 ASN C -1 UNP Q01137 CLONING ARTIFACT SEQADV 1TO5 GLY D -3 UNP Q01137 CLONING ARTIFACT SEQADV 1TO5 SER D -2 UNP Q01137 CLONING ARTIFACT SEQADV 1TO5 ASN D -1 UNP Q01137 CLONING ARTIFACT SEQRES 1 A 156 GLY SER ASN MET LYS ALA VAL CYS VAL MET THR GLY THR SEQRES 2 A 156 ALA GLY VAL LYS GLY VAL VAL LYS PHE THR GLN GLU THR SEQRES 3 A 156 ASP ASN GLY PRO VAL HIS VAL HIS ALA GLU PHE SER GLY SEQRES 4 A 156 LEU LYS ALA GLY LYS HIS GLY PHE HIS VAL HIS GLU PHE SEQRES 5 A 156 GLY ASP THR THR ASN GLY CYS THR SER ALA GLY ALA HIS SEQRES 6 A 156 PHE ASN PRO THR LYS GLN GLU HIS GLY ALA PRO GLU ASP SEQRES 7 A 156 SER ILE ARG HIS VAL GLY ASP LEU GLY ASN VAL VAL ALA SEQRES 8 A 156 GLY ALA ASP GLY ASN ALA VAL TYR ASN ALA THR ASP LYS SEQRES 9 A 156 LEU ILE SER LEU ASN GLY SER HIS SER ILE ILE GLY ARG SEQRES 10 A 156 SER MET VAL ILE HIS GLU ASN GLU ASP ASP LEU GLY ARG SEQRES 11 A 156 GLY GLY HIS GLU LEU SER LYS VAL THR GLY ASN ALA GLY SEQRES 12 A 156 GLY ARG LEU ALA CYS GLY VAL VAL GLY LEU ALA ALA GLU SEQRES 1 B 156 GLY SER ASN MET LYS ALA VAL CYS VAL MET THR GLY THR SEQRES 2 B 156 ALA GLY VAL LYS GLY VAL VAL LYS PHE THR GLN GLU THR SEQRES 3 B 156 ASP ASN GLY PRO VAL HIS VAL HIS ALA GLU PHE SER GLY SEQRES 4 B 156 LEU LYS ALA GLY LYS HIS GLY PHE HIS VAL HIS GLU PHE SEQRES 5 B 156 GLY ASP THR THR ASN GLY CYS THR SER ALA GLY ALA HIS SEQRES 6 B 156 PHE ASN PRO THR LYS GLN GLU HIS GLY ALA PRO GLU ASP SEQRES 7 B 156 SER ILE ARG HIS VAL GLY ASP LEU GLY ASN VAL VAL ALA SEQRES 8 B 156 GLY ALA ASP GLY ASN ALA VAL TYR ASN ALA THR ASP LYS SEQRES 9 B 156 LEU ILE SER LEU ASN GLY SER HIS SER ILE ILE GLY ARG SEQRES 10 B 156 SER MET VAL ILE HIS GLU ASN GLU ASP ASP LEU GLY ARG SEQRES 11 B 156 GLY GLY HIS GLU LEU SER LYS VAL THR GLY ASN ALA GLY SEQRES 12 B 156 GLY ARG LEU ALA CYS GLY VAL VAL GLY LEU ALA ALA GLU SEQRES 1 C 156 GLY SER ASN MET LYS ALA VAL CYS VAL MET THR GLY THR SEQRES 2 C 156 ALA GLY VAL LYS GLY VAL VAL LYS PHE THR GLN GLU THR SEQRES 3 C 156 ASP ASN GLY PRO VAL HIS VAL HIS ALA GLU PHE SER GLY SEQRES 4 C 156 LEU LYS ALA GLY LYS HIS GLY PHE HIS VAL HIS GLU PHE SEQRES 5 C 156 GLY ASP THR THR ASN GLY CYS THR SER ALA GLY ALA HIS SEQRES 6 C 156 PHE ASN PRO THR LYS GLN GLU HIS GLY ALA PRO GLU ASP SEQRES 7 C 156 SER ILE ARG HIS VAL GLY ASP LEU GLY ASN VAL VAL ALA SEQRES 8 C 156 GLY ALA ASP GLY ASN ALA VAL TYR ASN ALA THR ASP LYS SEQRES 9 C 156 LEU ILE SER LEU ASN GLY SER HIS SER ILE ILE GLY ARG SEQRES 10 C 156 SER MET VAL ILE HIS GLU ASN GLU ASP ASP LEU GLY ARG SEQRES 11 C 156 GLY GLY HIS GLU LEU SER LYS VAL THR GLY ASN ALA GLY SEQRES 12 C 156 GLY ARG LEU ALA CYS GLY VAL VAL GLY LEU ALA ALA GLU SEQRES 1 D 156 GLY SER ASN MET LYS ALA VAL CYS VAL MET THR GLY THR SEQRES 2 D 156 ALA GLY VAL LYS GLY VAL VAL LYS PHE THR GLN GLU THR SEQRES 3 D 156 ASP ASN GLY PRO VAL HIS VAL HIS ALA GLU PHE SER GLY SEQRES 4 D 156 LEU LYS ALA GLY LYS HIS GLY PHE HIS VAL HIS GLU PHE SEQRES 5 D 156 GLY ASP THR THR ASN GLY CYS THR SER ALA GLY ALA HIS SEQRES 6 D 156 PHE ASN PRO THR LYS GLN GLU HIS GLY ALA PRO GLU ASP SEQRES 7 D 156 SER ILE ARG HIS VAL GLY ASP LEU GLY ASN VAL VAL ALA SEQRES 8 D 156 GLY ALA ASP GLY ASN ALA VAL TYR ASN ALA THR ASP LYS SEQRES 9 D 156 LEU ILE SER LEU ASN GLY SER HIS SER ILE ILE GLY ARG SEQRES 10 D 156 SER MET VAL ILE HIS GLU ASN GLU ASP ASP LEU GLY ARG SEQRES 11 D 156 GLY GLY HIS GLU LEU SER LYS VAL THR GLY ASN ALA GLY SEQRES 12 D 156 GLY ARG LEU ALA CYS GLY VAL VAL GLY LEU ALA ALA GLU HET ZN A 711 1 HET CU A 712 1 HET ZN B 721 1 HET CU B 722 1 HET ZN C 731 1 HET CU C 732 1 HET ZN D 741 1 HET CU D 742 1 HET ACT B 701 4 HETNAM ZN ZINC ION HETNAM CU COPPER (II) ION HETNAM ACT ACETATE ION FORMUL 5 ZN 4(ZN 2+) FORMUL 6 CU 4(CU 2+) FORMUL 13 ACT C2 H3 O2 1- FORMUL 14 HOH *609(H2 O) HELIX 1 1 CYS A 56 GLY A 60 5 5 HELIX 2 2 ASN B 106 SER B 110 5 5 HELIX 3 3 HIS B 130 LYS B 134 5 5 HELIX 4 4 CYS C 56 GLY C 60 5 5 HELIX 5 5 ASN D 106 SER D 110 5 5 HELIX 6 6 HIS D 130 VAL D 135 5 6 SHEET 1 A 5 ALA A 94 ASP A 100 0 SHEET 2 A 5 VAL A 28 SER A 35 -1 N VAL A 30 O ALA A 98 SHEET 3 A 5 LYS A 14 GLN A 21 -1 N LYS A 18 O HIS A 31 SHEET 4 A 5 LYS A 2 MET A 7 -1 N MET A 7 O GLY A 15 SHEET 5 A 5 GLY A 149 LEU A 150 -1 O GLY A 149 N VAL A 4 SHEET 1 B 4 ASP A 82 ALA A 88 0 SHEET 2 B 4 GLY A 40 HIS A 47 -1 N GLY A 40 O ALA A 88 SHEET 3 B 4 SER A 115 HIS A 119 -1 O SER A 115 N HIS A 47 SHEET 4 B 4 ARG A 142 VAL A 147 -1 O GLY A 146 N MET A 116 SHEET 1 C 9 LYS B 2 MET B 7 0 SHEET 2 C 9 LYS B 14 THR B 20 -1 O PHE B 19 N ALA B 3 SHEET 3 C 9 VAL B 28 SER B 35 -1 O HIS B 29 N THR B 20 SHEET 4 C 9 ALA B 94 ASP B 100 -1 O ALA B 98 N VAL B 30 SHEET 5 C 9 ASP B 82 ALA B 88 -1 N VAL B 87 O VAL B 95 SHEET 6 C 9 GLY B 40 HIS B 47 -1 N GLY B 40 O ALA B 88 SHEET 7 C 9 SER B 115 HIS B 119 -1 O HIS B 119 N GLY B 43 SHEET 8 C 9 ARG B 142 LEU B 150 -1 O GLY B 146 N MET B 116 SHEET 9 C 9 LYS B 2 MET B 7 -1 N VAL B 4 O GLY B 149 SHEET 1 D 9 LYS C 2 GLY C 9 0 SHEET 2 D 9 LYS C 14 THR C 20 -1 O GLY C 15 N MET C 7 SHEET 3 D 9 VAL C 28 SER C 35 -1 O HIS C 29 N THR C 20 SHEET 4 D 9 ALA C 94 ASP C 100 -1 O ALA C 98 N VAL C 30 SHEET 5 D 9 ASP C 82 ALA C 88 -1 N VAL C 87 O VAL C 95 SHEET 6 D 9 GLY C 40 HIS C 47 -1 N GLY C 40 O ALA C 88 SHEET 7 D 9 SER C 115 HIS C 119 -1 O HIS C 119 N GLY C 43 SHEET 8 D 9 ARG C 142 LEU C 150 -1 O GLY C 146 N MET C 116 SHEET 9 D 9 LYS C 2 GLY C 9 -1 N VAL C 4 O GLY C 149 SHEET 1 E 5 ALA D 94 ASP D 100 0 SHEET 2 E 5 VAL D 28 SER D 35 -1 N VAL D 30 O ALA D 98 SHEET 3 E 5 LYS D 14 THR D 20 -1 N THR D 20 O HIS D 29 SHEET 4 E 5 LYS D 2 MET D 7 -1 N ALA D 3 O PHE D 19 SHEET 5 E 5 GLY D 149 LEU D 150 -1 O GLY D 149 N VAL D 4 SHEET 1 F 4 ASP D 82 ALA D 88 0 SHEET 2 F 4 GLY D 40 HIS D 47 -1 N GLY D 40 O ALA D 88 SHEET 3 F 4 SER D 115 HIS D 119 -1 O HIS D 119 N GLY D 43 SHEET 4 F 4 ARG D 142 VAL D 147 -1 O ALA D 144 N ILE D 118 SSBOND 1 CYS A 56 CYS A 145 1555 1555 2.04 SSBOND 2 CYS B 56 CYS B 145 1555 1555 2.03 SSBOND 3 CYS C 56 CYS C 145 1555 1555 2.03 SSBOND 4 CYS D 56 CYS D 145 1555 1555 2.03 LINK ZN ZN A 711 ND1 HIS A 62 1555 1555 2.03 LINK ZN ZN A 711 ND1 HIS A 70 1555 1555 2.05 LINK ZN ZN A 711 ND1 HIS A 79 1555 1555 2.14 LINK ZN ZN A 711 OD1 ASP A 82 1555 1555 1.98 LINK CU CU A 712 ND1 HIS A 45 1555 1555 2.24 LINK CU CU A 712 NE2 HIS A 119 1555 1555 2.07 LINK CU CU A 712 NE2 HIS A 47 1555 1555 2.22 LINK ZN ZN B 721 OD1 ASP B 82 1555 1555 2.01 LINK ZN ZN B 721 ND1 HIS B 62 1555 1555 2.06 LINK ZN ZN B 721 ND1 HIS B 70 1555 1555 2.00 LINK ZN ZN B 721 ND1 HIS B 79 1555 1555 2.12 LINK CU CU B 722 ND1 HIS B 45 1555 1555 2.17 LINK CU CU B 722 NE2 HIS B 47 1555 1555 2.02 LINK CU CU B 722 NE2 HIS B 119 1555 1555 2.08 LINK ZN ZN C 731 ND1 HIS C 79 1555 1555 2.09 LINK ZN ZN C 731 ND1 HIS C 62 1555 1555 2.06 LINK ZN ZN C 731 OD1 ASP C 82 1555 1555 2.03 LINK ZN ZN C 731 ND1 HIS C 70 1555 1555 2.02 LINK CU CU C 732 NE2 HIS C 47 1555 1555 2.04 LINK CU CU C 732 ND1 HIS C 45 1555 1555 2.19 LINK CU CU C 732 NE2 HIS C 119 1555 1555 2.04 LINK ZN ZN D 741 ND1 HIS D 62 1555 1555 2.10 LINK ZN ZN D 741 OD1 ASP D 82 1555 1555 1.90 LINK ZN ZN D 741 ND1 HIS D 70 1555 1555 2.00 LINK ZN ZN D 741 ND1 HIS D 79 1555 1555 2.03 LINK CU CU D 742 NE2 HIS D 47 1555 1555 2.02 LINK CU CU D 742 NE2 HIS D 119 1555 1555 2.06 LINK CU CU D 742 ND1 HIS D 45 1555 1555 2.26 SITE 1 AC1 4 HIS A 62 HIS A 70 HIS A 79 ASP A 82 SITE 1 AC2 4 HIS A 45 HIS A 47 HIS A 62 HIS A 119 SITE 1 AC3 4 HIS B 62 HIS B 70 HIS B 79 ASP B 82 SITE 1 AC4 4 HIS B 45 HIS B 47 HIS B 62 HIS B 119 SITE 1 AC5 4 HIS C 62 HIS C 70 HIS C 79 ASP C 82 SITE 1 AC6 4 HIS C 45 HIS C 47 HIS C 62 HIS C 119 SITE 1 AC7 4 HIS D 62 HIS D 70 HIS D 79 ASP D 82 SITE 1 AC8 4 HIS D 45 HIS D 47 HIS D 62 HIS D 119 SITE 1 AC9 5 GLU B 22 HIS B 29 HOH B 832 GLN C 68 SITE 2 AC9 5 HOH C 822 CRYST1 74.640 78.240 95.180 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013398 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012781 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010506 0.00000