HEADER BIOSYNTHETIC PROTEIN 14-JUN-04 1TO9 TITLE CRYSTAL STRUCTURE OF THI-4 PROTEIN FROM BACILLUS SUBTILIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: THI-4 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: THI-4 PROTEIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: TENA, BSU11650; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG7; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 12 ORGANISM_TAXID: 1423; SOURCE 13 GENE: TENA, BSU11650; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS TENA, THIAMINE BIOSYNTHESIS, ALL-ALPHA, STRUCTURAL GENOMICS, PSI, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, MCSG, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.S.RAJAN,L.SHUVALOVA,X.YANG,W.F.ANDERSON,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 5 19-NOV-14 1TO9 1 HET HETATM HETNAM HETSYN REVDAT 4 13-JUL-11 1TO9 1 VERSN REVDAT 3 24-FEB-09 1TO9 1 VERSN REVDAT 2 18-JAN-05 1TO9 1 AUTHOR KEYWDS REMARK REVDAT 1 10-AUG-04 1TO9 0 JRNL AUTH S.S.RAJAN,L.SHUVALOVA,X.YANG,C.HUSSAR,F.COLLART,W.F.ANDERSON JRNL TITL CRYSTAL STRUCTURE OF THI-4 PROTEIN FROM BACILLUS SUBTILIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 20042 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1084 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1445 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2330 REMARK 3 BIN FREE R VALUE SET COUNT : 82 REMARK 3 BIN FREE R VALUE : 0.3060 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3701 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 29 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.10000 REMARK 3 B22 (A**2) : 2.10000 REMARK 3 B33 (A**2) : -4.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.446 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.272 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.178 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.675 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.901 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3849 ; 0.014 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 3229 ; 0.012 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5210 ; 1.199 ; 1.928 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7510 ; 0.689 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 446 ; 4.116 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 505 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4357 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 901 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1096 ; 0.251 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3918 ; 0.252 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 2048 ; 0.094 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 196 ; 0.207 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 18 ; 0.159 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 81 ; 0.212 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.107 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2226 ; 4.389 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3550 ; 6.359 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1623 ; 8.544 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1660 ;11.122 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 226 REMARK 3 RESIDUE RANGE : B 2 B 221 REMARK 3 ORIGIN FOR THE GROUP (A): -2.2590 -13.3203 16.0012 REMARK 3 T TENSOR REMARK 3 T11: 0.0346 T22: 0.1761 REMARK 3 T33: 0.0920 T12: 0.0687 REMARK 3 T13: -0.0166 T23: 0.0173 REMARK 3 L TENSOR REMARK 3 L11: 0.3307 L22: 0.0726 REMARK 3 L33: 3.3502 L12: 0.0035 REMARK 3 L13: 0.0920 L23: 0.2568 REMARK 3 S TENSOR REMARK 3 S11: -0.0086 S12: 0.0674 S13: 0.0065 REMARK 3 S21: 0.0689 S22: -0.0238 S23: 0.0391 REMARK 3 S31: 0.0220 S32: 0.5539 S33: 0.0324 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1TO9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JUN-04. REMARK 100 THE RCSB ID CODE IS RCSB022793. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-OCT-03; 05-DEC-03 REMARK 200 TEMPERATURE (KELVIN) : 77; 77 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; APS REMARK 200 BEAMLINE : 5ID-B; 5ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979; 0.979 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL; SI 111 CHANNEL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH; MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21219 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : 0.03900 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.11700 REMARK 200 R SYM FOR SHELL (I) : 0.08900 REMARK 200 FOR SHELL : 7.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SAD; SAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M HEXANEDIOL, 0.2M CACL2, 0.1M SODIUM REMARK 280 ACETATE, PH 4.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 148.12000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 29.19000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 29.19000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 74.06000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 29.19000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 29.19000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 222.18000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 29.19000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 29.19000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 74.06000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 29.19000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 29.19000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 222.18000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 148.12000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 GLY A -14 REMARK 465 VAL A -13 REMARK 465 ASP A -12 REMARK 465 LEU A -11 REMARK 465 GLY A -10 REMARK 465 THR A -9 REMARK 465 GLU A -8 REMARK 465 ASN A -7 REMARK 465 LEU A -6 REMARK 465 TYR A -5 REMARK 465 PHE A -4 REMARK 465 GLN A -3 REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 GLU A 227 REMARK 465 GLU A 228 REMARK 465 CYS A 229 REMARK 465 GLY A 230 REMARK 465 ALA A 231 REMARK 465 SER A 232 REMARK 465 ARG A 233 REMARK 465 HIS A 234 REMARK 465 ASN A 235 REMARK 465 GLY A 236 REMARK 465 MSE B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 SER B -16 REMARK 465 SER B -15 REMARK 465 GLY B -14 REMARK 465 VAL B -13 REMARK 465 ASP B -12 REMARK 465 LEU B -11 REMARK 465 GLY B -10 REMARK 465 THR B -9 REMARK 465 GLU B -8 REMARK 465 ASN B -7 REMARK 465 LEU B -6 REMARK 465 TYR B -5 REMARK 465 PHE B -4 REMARK 465 GLN B -3 REMARK 465 SER B -2 REMARK 465 ALA B 222 REMARK 465 ILE B 223 REMARK 465 LYS B 224 REMARK 465 GLU B 225 REMARK 465 VAL B 226 REMARK 465 GLU B 227 REMARK 465 GLU B 228 REMARK 465 CYS B 229 REMARK 465 GLY B 230 REMARK 465 ALA B 231 REMARK 465 SER B 232 REMARK 465 ARG B 233 REMARK 465 HIS B 234 REMARK 465 ASN B 235 REMARK 465 GLY B 236 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 310 O HOH B 321 2.15 REMARK 500 O HOH A 307 O HOH A 310 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY A 30 N GLY A 30 CA 0.141 REMARK 500 ASP A 29 C GLY A 30 N 0.139 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 118 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG A 118 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 85 42.09 -82.05 REMARK 500 HIS A 86 -47.30 -149.36 REMARK 500 GLU A 94 52.46 -100.64 REMARK 500 ALA A 102 32.05 -84.76 REMARK 500 HIS A 153 112.57 -165.55 REMARK 500 PHE A 168 -78.88 -50.29 REMARK 500 ARG A 169 -112.55 5.65 REMARK 500 GLN A 170 -51.96 -4.37 REMARK 500 GLU A 225 -60.71 -96.19 REMARK 500 ALA B 0 -7.05 -148.00 REMARK 500 MSE B 1 -65.25 79.71 REMARK 500 LEU B 85 34.22 -94.58 REMARK 500 HIS B 148 7.94 -69.51 REMARK 500 ASP B 220 -74.59 -10.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HMH A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HMH B 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC1217 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUE 149 IS OXIDIZED IN CHAIN B. DBREF 1TO9 A 1 236 UNP P25052 TENA_BACSU 1 236 DBREF 1TO9 B 1 236 UNP P25052 TENA_BACSU 1 236 SEQADV 1TO9 MSE A -23 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 HIS A -22 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 HIS A -21 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 HIS A -20 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 HIS A -19 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 HIS A -18 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 HIS A -17 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 SER A -16 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 SER A -15 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 GLY A -14 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 VAL A -13 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 ASP A -12 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 LEU A -11 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 GLY A -10 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 THR A -9 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 GLU A -8 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 ASN A -7 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 LEU A -6 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 TYR A -5 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 PHE A -4 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 GLN A -3 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 SER A -2 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 ASN A -1 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 ALA A 0 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 MSE A 1 UNP P25052 MET 1 MODIFIED RESIDUE SEQADV 1TO9 MSE A 71 UNP P25052 MET 71 MODIFIED RESIDUE SEQADV 1TO9 MSE A 83 UNP P25052 MET 83 MODIFIED RESIDUE SEQADV 1TO9 MSE A 116 UNP P25052 MET 116 MODIFIED RESIDUE SEQADV 1TO9 MSE A 194 UNP P25052 MET 194 MODIFIED RESIDUE SEQADV 1TO9 MSE A 211 UNP P25052 MET 211 MODIFIED RESIDUE SEQADV 1TO9 MSE B -23 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 HIS B -22 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 HIS B -21 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 HIS B -20 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 HIS B -19 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 HIS B -18 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 HIS B -17 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 SER B -16 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 SER B -15 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 GLY B -14 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 VAL B -13 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 ASP B -12 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 LEU B -11 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 GLY B -10 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 THR B -9 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 GLU B -8 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 ASN B -7 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 LEU B -6 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 TYR B -5 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 PHE B -4 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 GLN B -3 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 SER B -2 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 ASN B -1 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 ALA B 0 UNP P25052 CLONING ARTIFACT SEQADV 1TO9 MSE B 1 UNP P25052 MET 1 MODIFIED RESIDUE SEQADV 1TO9 MSE B 71 UNP P25052 MET 71 MODIFIED RESIDUE SEQADV 1TO9 MSE B 83 UNP P25052 MET 83 MODIFIED RESIDUE SEQADV 1TO9 MSE B 116 UNP P25052 MET 116 MODIFIED RESIDUE SEQADV 1TO9 CSD B 149 UNP P25052 CYS 149 SEE REMARK 999 SEQADV 1TO9 MSE B 194 UNP P25052 MET 194 MODIFIED RESIDUE SEQADV 1TO9 MSE B 211 UNP P25052 MET 211 MODIFIED RESIDUE SEQRES 1 A 260 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 260 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MSE LYS SEQRES 3 A 260 PHE SER GLU GLU CYS ARG SER ALA ALA ALA GLU TRP TRP SEQRES 4 A 260 GLU GLY SER PHE VAL HIS PRO PHE VAL GLN GLY ILE GLY SEQRES 5 A 260 ASP GLY THR LEU PRO ILE ASP ARG PHE LYS TYR TYR VAL SEQRES 6 A 260 LEU GLN ASP SER TYR TYR LEU THR HIS PHE ALA LYS VAL SEQRES 7 A 260 GLN SER PHE GLY ALA ALA TYR ALA LYS ASP LEU TYR THR SEQRES 8 A 260 THR GLY ARG MSE ALA SER HIS ALA GLN GLY THR TYR GLU SEQRES 9 A 260 ALA GLU MSE ALA LEU HIS ARG GLU PHE ALA GLU LEU LEU SEQRES 10 A 260 GLU ILE SER GLU GLU GLU ARG LYS ALA PHE LYS PRO SER SEQRES 11 A 260 PRO THR ALA TYR SER TYR THR SER HIS MSE TYR ARG SER SEQRES 12 A 260 VAL LEU SER GLY ASN PHE ALA GLU ILE LEU ALA ALA LEU SEQRES 13 A 260 LEU PRO CYS TYR TRP LEU TYR TYR GLU VAL GLY GLU LYS SEQRES 14 A 260 LEU LEU HIS CYS ASP PRO GLY HIS PRO ILE TYR GLN LYS SEQRES 15 A 260 TRP ILE GLY THR TYR GLY GLY ASP TRP PHE ARG GLN GLN SEQRES 16 A 260 VAL GLU GLU GLN ILE ASN ARG PHE ASP GLU LEU ALA GLU SEQRES 17 A 260 ASN SER THR GLU GLU VAL ARG ALA LYS MSE LYS GLU ASN SEQRES 18 A 260 PHE VAL ILE SER SER TYR TYR GLU TYR GLN PHE TRP GLY SEQRES 19 A 260 MSE ALA TYR ARG LYS GLU GLY TRP SER ASP SER ALA ILE SEQRES 20 A 260 LYS GLU VAL GLU GLU CYS GLY ALA SER ARG HIS ASN GLY SEQRES 1 B 260 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 260 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MSE LYS SEQRES 3 B 260 PHE SER GLU GLU CYS ARG SER ALA ALA ALA GLU TRP TRP SEQRES 4 B 260 GLU GLY SER PHE VAL HIS PRO PHE VAL GLN GLY ILE GLY SEQRES 5 B 260 ASP GLY THR LEU PRO ILE ASP ARG PHE LYS TYR TYR VAL SEQRES 6 B 260 LEU GLN ASP SER TYR TYR LEU THR HIS PHE ALA LYS VAL SEQRES 7 B 260 GLN SER PHE GLY ALA ALA TYR ALA LYS ASP LEU TYR THR SEQRES 8 B 260 THR GLY ARG MSE ALA SER HIS ALA GLN GLY THR TYR GLU SEQRES 9 B 260 ALA GLU MSE ALA LEU HIS ARG GLU PHE ALA GLU LEU LEU SEQRES 10 B 260 GLU ILE SER GLU GLU GLU ARG LYS ALA PHE LYS PRO SER SEQRES 11 B 260 PRO THR ALA TYR SER TYR THR SER HIS MSE TYR ARG SER SEQRES 12 B 260 VAL LEU SER GLY ASN PHE ALA GLU ILE LEU ALA ALA LEU SEQRES 13 B 260 LEU PRO CYS TYR TRP LEU TYR TYR GLU VAL GLY GLU LYS SEQRES 14 B 260 LEU LEU HIS CSD ASP PRO GLY HIS PRO ILE TYR GLN LYS SEQRES 15 B 260 TRP ILE GLY THR TYR GLY GLY ASP TRP PHE ARG GLN GLN SEQRES 16 B 260 VAL GLU GLU GLN ILE ASN ARG PHE ASP GLU LEU ALA GLU SEQRES 17 B 260 ASN SER THR GLU GLU VAL ARG ALA LYS MSE LYS GLU ASN SEQRES 18 B 260 PHE VAL ILE SER SER TYR TYR GLU TYR GLN PHE TRP GLY SEQRES 19 B 260 MSE ALA TYR ARG LYS GLU GLY TRP SER ASP SER ALA ILE SEQRES 20 B 260 LYS GLU VAL GLU GLU CYS GLY ALA SER ARG HIS ASN GLY MODRES 1TO9 MSE A 71 MET SELENOMETHIONINE MODRES 1TO9 MSE A 83 MET SELENOMETHIONINE MODRES 1TO9 MSE A 116 MET SELENOMETHIONINE MODRES 1TO9 MSE A 194 MET SELENOMETHIONINE MODRES 1TO9 MSE A 211 MET SELENOMETHIONINE MODRES 1TO9 MSE B 1 MET SELENOMETHIONINE MODRES 1TO9 MSE B 71 MET SELENOMETHIONINE MODRES 1TO9 MSE B 83 MET SELENOMETHIONINE MODRES 1TO9 MSE B 116 MET SELENOMETHIONINE MODRES 1TO9 CSD B 149 CYS 3-SULFINOALANINE MODRES 1TO9 MSE B 194 MET SELENOMETHIONINE MODRES 1TO9 MSE B 211 MET SELENOMETHIONINE HET MSE A 71 8 HET MSE A 83 8 HET MSE A 116 8 HET MSE A 194 8 HET MSE A 211 8 HET MSE B 1 8 HET MSE B 71 8 HET MSE B 83 8 HET MSE B 116 8 HET CSD B 149 8 HET MSE B 194 8 HET MSE B 211 8 HET HMH A 301 12 HET HMH B 302 12 HETNAM MSE SELENOMETHIONINE HETNAM CSD 3-SULFINOALANINE HETNAM HMH 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE FORMUL 1 MSE 11(C5 H11 N O2 SE) FORMUL 2 CSD C3 H7 N O4 S FORMUL 3 HMH 2(C6 H9 N3 O) FORMUL 5 HOH *29(H2 O) HELIX 1 1 LYS A 2 ALA A 11 1 10 HELIX 2 2 ALA A 11 VAL A 20 1 10 HELIX 3 3 HIS A 21 ASP A 29 1 9 HELIX 4 4 PRO A 33 ALA A 62 1 30 HELIX 5 5 ASP A 64 LEU A 93 1 30 HELIX 6 6 SER A 96 ALA A 102 1 7 HELIX 7 7 SER A 106 LEU A 121 1 16 HELIX 8 8 ASN A 124 LEU A 146 1 23 HELIX 9 9 HIS A 153 GLY A 165 1 13 HELIX 10 10 GLN A 170 ASN A 185 1 16 HELIX 11 11 THR A 187 ARG A 214 1 28 HELIX 12 12 SER A 219 VAL A 226 1 8 HELIX 13 13 LYS B 2 ALA B 11 1 10 HELIX 14 14 ALA B 11 VAL B 20 1 10 HELIX 15 15 HIS B 21 GLY B 30 1 10 HELIX 16 16 PRO B 33 ALA B 62 1 30 HELIX 17 17 ASP B 64 LEU B 85 1 22 HELIX 18 18 LEU B 85 LEU B 92 1 8 HELIX 19 19 SER B 106 LEU B 121 1 16 HELIX 20 20 ASN B 124 LEU B 146 1 23 HELIX 21 21 HIS B 153 GLY B 164 1 12 HELIX 22 22 GLY B 165 ASN B 185 1 21 HELIX 23 23 THR B 187 ARG B 214 1 28 LINK C ARG A 70 N MSE A 71 1555 1555 1.33 LINK C MSE A 71 N ALA A 72 1555 1555 1.33 LINK C GLU A 82 N MSE A 83 1555 1555 1.33 LINK C MSE A 83 N ALA A 84 1555 1555 1.34 LINK C HIS A 115 N MSE A 116 1555 1555 1.32 LINK C MSE A 116 N TYR A 117 1555 1555 1.33 LINK C LYS A 193 N MSE A 194 1555 1555 1.34 LINK C MSE A 194 N LYS A 195 1555 1555 1.33 LINK C GLY A 210 N MSE A 211 1555 1555 1.32 LINK C MSE A 211 N ALA A 212 1555 1555 1.33 LINK C ALA B 0 N MSE B 1 1555 1555 1.34 LINK C MSE B 1 N LYS B 2 1555 1555 1.33 LINK C ARG B 70 N MSE B 71 1555 1555 1.33 LINK C MSE B 71 N ALA B 72 1555 1555 1.33 LINK C GLU B 82 N MSE B 83 1555 1555 1.33 LINK C MSE B 83 N ALA B 84 1555 1555 1.33 LINK C HIS B 115 N MSE B 116 1555 1555 1.31 LINK C MSE B 116 N TYR B 117 1555 1555 1.33 LINK C HIS B 148 N CSD B 149 1555 1555 1.35 LINK C CSD B 149 N ASP B 150 1555 1555 1.34 LINK C LYS B 193 N MSE B 194 1555 1555 1.32 LINK C MSE B 194 N LYS B 195 1555 1555 1.33 LINK C GLY B 210 N MSE B 211 1555 1555 1.33 LINK C MSE B 211 N ALA B 212 1555 1555 1.33 SITE 1 AC1 8 ASP A 44 TYR A 47 ALA A 81 LEU A 85 SITE 2 AC1 8 CYS A 135 TYR A 139 TYR A 163 GLU A 205 SITE 1 AC2 6 ASP B 44 TYR B 47 CYS B 135 TYR B 139 SITE 2 AC2 6 TYR B 163 GLU B 205 CRYST1 58.380 58.380 296.240 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017129 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017129 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003376 0.00000