HEADER CHAPERONE 21-JUN-04 1TR8 TITLE CRYSTAL STRUCTURE OF ARCHAEAL NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX TITLE 2 (AENAC) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONSERVED PROTEIN (MTH177); COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: N-TERMINAL TRUNCATED AENAC (AMINOACIDS 19-117); COMPND 5 SYNONYM: DELTA1-18 ARCHAEAL NASCENT POLYPEPTIDE ASSOCIATED COMPLEX; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOTHERMOBACTER MARBURGENSIS; SOURCE 3 ORGANISM_TAXID: 145263; SOURCE 4 GENE: MTH177 (AMONOACIDS 19-117); SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ER2566; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS CHAPERONES, NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX, RIBOSOME, UBA- KEYWDS 2 DOMAIN, UBIQUITIN, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR T.SPRETER,M.PECH,B.BEATRIX REVDAT 5 13-JUL-11 1TR8 1 VERSN REVDAT 4 24-FEB-09 1TR8 1 VERSN REVDAT 3 26-APR-05 1TR8 1 JRNL REVDAT 2 22-FEB-05 1TR8 1 COMPND SOURCE REVDAT 1 01-FEB-05 1TR8 0 JRNL AUTH T.SPRETER,M.PECH,B.BEATRIX JRNL TITL THE CRYSTAL STRUCTURE OF ARCHAEAL NASCENT JRNL TITL 2 POLYPEPTIDE-ASSOCIATED COMPLEX (NAC) REVEALS A UNIQUE FOLD JRNL TITL 3 AND THE PRESENCE OF A UBA DOMAIN JRNL REF J.BIOL.CHEM. V. 280 15849 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 15665334 JRNL DOI 10.1074/JBC.M500160200 REMARK 2 REMARK 2 RESOLUTION. 2.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.9999 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 4.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 8963 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 453 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.27 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 554 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2170 REMARK 3 BIN FREE R VALUE SET COUNT : 48 REMARK 3 BIN FREE R VALUE : 0.2650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1452 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 42 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 56.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.81000 REMARK 3 B22 (A**2) : 1.81000 REMARK 3 B33 (A**2) : -3.63000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.323 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.231 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.171 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.873 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1458 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1408 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1946 ; 1.334 ; 1.988 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3288 ; 0.676 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 182 ; 5.696 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 70 ;39.856 ;25.429 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 316 ;18.186 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;18.991 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 224 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1586 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 252 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 208 ; 0.221 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1235 ; 0.220 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 935 ; 0.089 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 47 ; 0.191 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.038 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 20 ; 0.373 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 101 ; 0.297 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.175 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1113 ; 1.489 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 380 ; 0.250 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1466 ; 1.593 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 578 ; 2.903 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 480 ; 4.461 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 27 A 70 2 REMARK 3 1 B 27 B 70 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 260 ; 0.08 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 A (A): 460 ; 0.82 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 260 ; 0.19 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 460 ; 0.71 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 79 A 115 2 REMARK 3 1 B 79 B 115 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 A (A): 218 ; 0.07 ; 0.05 REMARK 3 MEDIUM POSITIONAL 2 A (A): 317 ; 0.71 ; 0.50 REMARK 3 TIGHT THERMAL 2 A (A**2): 218 ; 0.21 ; 0.50 REMARK 3 MEDIUM THERMAL 2 A (A**2): 317 ; 0.92 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 26 A 53 REMARK 3 ORIGIN FOR THE GROUP (A): 84.1360 24.0640 60.2960 REMARK 3 T TENSOR REMARK 3 T11: -0.1399 T22: -0.0905 REMARK 3 T33: -0.1194 T12: -0.0283 REMARK 3 T13: 0.0243 T23: 0.0299 REMARK 3 L TENSOR REMARK 3 L11: 6.1835 L22: 3.1405 REMARK 3 L33: 9.3886 L12: 1.4619 REMARK 3 L13: 5.3117 L23: 2.3557 REMARK 3 S TENSOR REMARK 3 S11: -0.0735 S12: 0.3274 S13: -0.1666 REMARK 3 S21: -0.2861 S22: 0.1562 S23: -0.2094 REMARK 3 S31: 0.1103 S32: 0.2483 S33: -0.0827 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 26 B 53 REMARK 3 ORIGIN FOR THE GROUP (A): 64.3790 12.2260 61.4610 REMARK 3 T TENSOR REMARK 3 T11: -0.1233 T22: -0.1377 REMARK 3 T33: -0.0999 T12: -0.0431 REMARK 3 T13: -0.0254 T23: 0.0391 REMARK 3 L TENSOR REMARK 3 L11: 4.3505 L22: 5.3568 REMARK 3 L33: 11.5758 L12: -1.6234 REMARK 3 L13: -1.6205 L23: 1.2215 REMARK 3 S TENSOR REMARK 3 S11: 0.0616 S12: 0.0290 S13: 0.1151 REMARK 3 S21: -0.1056 S22: -0.1110 S23: 0.0642 REMARK 3 S31: -0.3904 S32: 0.0273 S33: 0.0493 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 54 A 61 REMARK 3 ORIGIN FOR THE GROUP (A): 80.4480 36.9780 71.4890 REMARK 3 T TENSOR REMARK 3 T11: 0.0949 T22: -0.0573 REMARK 3 T33: 0.0997 T12: 0.0291 REMARK 3 T13: -0.0515 T23: -0.0600 REMARK 3 L TENSOR REMARK 3 L11: 25.2038 L22: 15.1256 REMARK 3 L33: 15.5461 L12: -13.7691 REMARK 3 L13: -13.7525 L23: 8.1263 REMARK 3 S TENSOR REMARK 3 S11: 0.0373 S12: -0.6023 S13: 0.8957 REMARK 3 S21: 0.3579 S22: -0.0604 S23: 0.2711 REMARK 3 S31: -0.4014 S32: -0.1106 S33: 0.0231 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 54 B 61 REMARK 3 ORIGIN FOR THE GROUP (A): 58.1440 -0.4380 71.5990 REMARK 3 T TENSOR REMARK 3 T11: 0.7561 T22: 0.0985 REMARK 3 T33: 0.4575 T12: -0.1621 REMARK 3 T13: 0.0313 T23: 0.0565 REMARK 3 L TENSOR REMARK 3 L11: 14.8026 L22: 18.5753 REMARK 3 L33: 6.6306 L12: 16.4506 REMARK 3 L13: -9.9056 L23: -10.9845 REMARK 3 S TENSOR REMARK 3 S11: 1.3861 S12: -0.8187 S13: -1.1612 REMARK 3 S21: 4.1545 S22: -0.5869 S23: 0.9872 REMARK 3 S31: 0.1682 S32: -0.6868 S33: -0.7992 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 62 A 72 REMARK 3 ORIGIN FOR THE GROUP (A): 85.2790 24.2830 55.0930 REMARK 3 T TENSOR REMARK 3 T11: -0.1375 T22: -0.0466 REMARK 3 T33: -0.0133 T12: 0.0027 REMARK 3 T13: -0.0026 T23: 0.0334 REMARK 3 L TENSOR REMARK 3 L11: 1.0653 L22: 7.3353 REMARK 3 L33: 22.2705 L12: 1.4067 REMARK 3 L13: 4.4729 L23: 10.2787 REMARK 3 S TENSOR REMARK 3 S11: -0.2536 S12: 0.3938 S13: 0.5426 REMARK 3 S21: -0.5974 S22: 0.0682 S23: -0.0478 REMARK 3 S31: -0.3276 S32: 0.9363 S33: 0.1854 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 62 B 72 REMARK 3 ORIGIN FOR THE GROUP (A): 64.1130 13.1120 56.0380 REMARK 3 T TENSOR REMARK 3 T11: -0.0889 T22: -0.1154 REMARK 3 T33: -0.0405 T12: -0.0420 REMARK 3 T13: -0.0016 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 4.8676 L22: 2.7614 REMARK 3 L33: 10.4217 L12: 2.3252 REMARK 3 L13: 0.2972 L23: -1.3893 REMARK 3 S TENSOR REMARK 3 S11: -0.5644 S12: 0.6540 S13: -0.0975 REMARK 3 S21: -0.1221 S22: 0.1898 S23: 0.3148 REMARK 3 S31: -0.5331 S32: -0.7352 S33: 0.3746 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 80 A 115 REMARK 3 ORIGIN FOR THE GROUP (A): 59.8950 16.8270 34.8710 REMARK 3 T TENSOR REMARK 3 T11: -0.2465 T22: -0.0818 REMARK 3 T33: -0.0883 T12: -0.0561 REMARK 3 T13: -0.0317 T23: 0.0079 REMARK 3 L TENSOR REMARK 3 L11: 9.1470 L22: 11.4523 REMARK 3 L33: 7.4897 L12: -5.0491 REMARK 3 L13: -0.0223 L23: -2.5604 REMARK 3 S TENSOR REMARK 3 S11: -0.1213 S12: 0.1396 S13: 0.0668 REMARK 3 S21: 0.2363 S22: -0.2292 S23: 0.3503 REMARK 3 S31: 0.2088 S32: 0.2654 S33: 0.3505 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 80 B 115 REMARK 3 ORIGIN FOR THE GROUP (A): 90.1180 20.7530 33.4300 REMARK 3 T TENSOR REMARK 3 T11: -0.1552 T22: -0.0665 REMARK 3 T33: 0.0087 T12: -0.0303 REMARK 3 T13: 0.0524 T23: 0.0860 REMARK 3 L TENSOR REMARK 3 L11: 10.1194 L22: 2.2957 REMARK 3 L33: 21.4211 L12: -0.0738 REMARK 3 L13: 3.4305 L23: -1.1292 REMARK 3 S TENSOR REMARK 3 S11: -0.1584 S12: -0.3463 S13: 0.0801 REMARK 3 S21: 0.3138 S22: -0.4563 S23: -0.2397 REMARK 3 S31: 0.8435 S32: 0.8374 S33: 0.6147 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1TR8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-JUN-04. REMARK 100 THE RCSB ID CODE IS RCSB022864. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-OCT-03 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795, 0.9797, 0.9117, 0.99 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8963 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.270 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : 0.04500 REMARK 200 FOR THE DATA SET : 8.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.16800 REMARK 200 R SYM FOR SHELL (I) : 0.16800 REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: PHENIX (HYSS), SHARP, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM MALONATE, PH 7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 24.73800 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 45.44500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 45.44500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.10700 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 45.44500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 45.44500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 12.36900 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 45.44500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 45.44500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 37.10700 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 45.44500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 45.44500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 12.36900 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 24.73800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A HOMODIMER. THE TWO MONOMERS IN THE REMARK 300 ASYMETRIC UNIT BELONG TO TWO DIFFERENT HOMODIMERS. EACH BIOLOGICAL REMARK 300 UNIT IS ASSEMBLED BY THE CRYSTAL SYMMETRY. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 90.89000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 90.89000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 123.69000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 16 REMARK 465 SER A 17 REMARK 465 HIS A 18 REMARK 465 MSE A 19 REMARK 465 LYS A 20 REMARK 465 GLN A 21 REMARK 465 MSE A 22 REMARK 465 GLY A 23 REMARK 465 MSE A 24 REMARK 465 SER A 117 REMARK 465 GLY B 16 REMARK 465 SER B 17 REMARK 465 HIS B 18 REMARK 465 MSE B 19 REMARK 465 LYS B 20 REMARK 465 GLN B 21 REMARK 465 MSE B 22 REMARK 465 GLY B 23 REMARK 465 MSE B 24 REMARK 465 SER B 117 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 76 O HOH A 144 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 97 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU B 34 138.36 -176.12 REMARK 500 ASN B 48 56.77 37.69 REMARK 500 REMARK 500 REMARK: NULL DBREF 1TR8 A 19 117 UNP P0C0K9 NAC_METTM 19 117 DBREF 1TR8 B 19 117 UNP P0C0K9 NAC_METTM 19 117 SEQADV 1TR8 GLY A 16 UNP P0C0K9 CLONING ARTIFACT SEQADV 1TR8 SER A 17 UNP P0C0K9 CLONING ARTIFACT SEQADV 1TR8 HIS A 18 UNP P0C0K9 CLONING ARTIFACT SEQADV 1TR8 MSE A 19 UNP P0C0K9 MET 19 MODIFIED RESIDUE SEQADV 1TR8 MSE A 22 UNP P0C0K9 MET 22 MODIFIED RESIDUE SEQADV 1TR8 MSE A 24 UNP P0C0K9 MET 24 MODIFIED RESIDUE SEQADV 1TR8 MSE A 26 UNP P0C0K9 MET 26 MODIFIED RESIDUE SEQADV 1TR8 MSE A 54 UNP P0C0K9 MET 54 MODIFIED RESIDUE SEQADV 1TR8 MSE A 57 UNP P0C0K9 MET 57 MODIFIED RESIDUE SEQADV 1TR8 MSE A 77 UNP P0C0K9 MET 77 MODIFIED RESIDUE SEQADV 1TR8 MSE A 88 UNP P0C0K9 MET 88 MODIFIED RESIDUE SEQADV 1TR8 MSE A 114 UNP P0C0K9 MET 114 MODIFIED RESIDUE SEQADV 1TR8 GLY B 16 UNP P0C0K9 CLONING ARTIFACT SEQADV 1TR8 SER B 17 UNP P0C0K9 CLONING ARTIFACT SEQADV 1TR8 HIS B 18 UNP P0C0K9 CLONING ARTIFACT SEQADV 1TR8 MSE B 19 UNP P0C0K9 MET 19 MODIFIED RESIDUE SEQADV 1TR8 MSE B 22 UNP P0C0K9 MET 22 MODIFIED RESIDUE SEQADV 1TR8 MSE B 24 UNP P0C0K9 MET 24 MODIFIED RESIDUE SEQADV 1TR8 MSE B 26 UNP P0C0K9 MET 26 MODIFIED RESIDUE SEQADV 1TR8 MSE B 54 UNP P0C0K9 MET 54 MODIFIED RESIDUE SEQADV 1TR8 MSE B 57 UNP P0C0K9 MET 57 MODIFIED RESIDUE SEQADV 1TR8 MSE B 77 UNP P0C0K9 MET 77 MODIFIED RESIDUE SEQADV 1TR8 MSE B 88 UNP P0C0K9 MET 88 MODIFIED RESIDUE SEQADV 1TR8 MSE B 114 UNP P0C0K9 MET 114 MODIFIED RESIDUE SEQRES 1 A 102 GLY SER HIS MSE LYS GLN MSE GLY MSE ASP MSE LYS ASP SEQRES 2 A 102 LEU ARG GLY VAL GLU GLU VAL VAL ILE LYS LEU LYS ARG SEQRES 3 A 102 LYS GLU ILE ILE ILE LYS ASN PRO LYS VAL ASN VAL MSE SEQRES 4 A 102 GLU PHE MSE GLY GLN LYS THR TYR GLN VAL THR GLY LYS SEQRES 5 A 102 ALA ARG GLU ARG SER LEU GLU ALA GLU MSE GLU ILE PRO SEQRES 6 A 102 GLU ASP ASP ILE GLU LEU VAL MSE ASN GLN THR GLY ALA SEQRES 7 A 102 SER ARG GLU ASP ALA THR ARG ALA LEU GLN GLU THR GLY SEQRES 8 A 102 GLY ASP LEU ALA GLU ALA ILE MSE ARG LEU SER SEQRES 1 B 102 GLY SER HIS MSE LYS GLN MSE GLY MSE ASP MSE LYS ASP SEQRES 2 B 102 LEU ARG GLY VAL GLU GLU VAL VAL ILE LYS LEU LYS ARG SEQRES 3 B 102 LYS GLU ILE ILE ILE LYS ASN PRO LYS VAL ASN VAL MSE SEQRES 4 B 102 GLU PHE MSE GLY GLN LYS THR TYR GLN VAL THR GLY LYS SEQRES 5 B 102 ALA ARG GLU ARG SER LEU GLU ALA GLU MSE GLU ILE PRO SEQRES 6 B 102 GLU ASP ASP ILE GLU LEU VAL MSE ASN GLN THR GLY ALA SEQRES 7 B 102 SER ARG GLU ASP ALA THR ARG ALA LEU GLN GLU THR GLY SEQRES 8 B 102 GLY ASP LEU ALA GLU ALA ILE MSE ARG LEU SER MODRES 1TR8 MSE A 26 MET SELENOMETHIONINE MODRES 1TR8 MSE A 54 MET SELENOMETHIONINE MODRES 1TR8 MSE A 57 MET SELENOMETHIONINE MODRES 1TR8 MSE A 77 MET SELENOMETHIONINE MODRES 1TR8 MSE A 88 MET SELENOMETHIONINE MODRES 1TR8 MSE A 114 MET SELENOMETHIONINE MODRES 1TR8 MSE B 26 MET SELENOMETHIONINE MODRES 1TR8 MSE B 54 MET SELENOMETHIONINE MODRES 1TR8 MSE B 57 MET SELENOMETHIONINE MODRES 1TR8 MSE B 77 MET SELENOMETHIONINE MODRES 1TR8 MSE B 88 MET SELENOMETHIONINE MODRES 1TR8 MSE B 114 MET SELENOMETHIONINE HET MSE A 26 8 HET MSE A 54 8 HET MSE A 57 8 HET MSE A 77 8 HET MSE A 88 8 HET MSE A 114 8 HET MSE B 26 8 HET MSE B 54 8 HET MSE B 57 8 HET MSE B 77 8 HET MSE B 88 8 HET MSE B 114 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 HOH *42(H2 O) HELIX 1 1 PRO A 80 GLY A 92 1 13 HELIX 2 2 SER A 94 THR A 105 1 12 HELIX 3 3 ASP A 108 LEU A 116 1 9 HELIX 4 4 PRO B 80 GLY B 92 1 13 HELIX 5 5 SER B 94 THR B 105 1 12 HELIX 6 6 ASP B 108 LEU B 116 1 9 SHEET 1 A 3 LYS A 27 LEU A 29 0 SHEET 2 A 3 LYS A 50 PHE A 56 -1 O VAL A 53 N LYS A 27 SHEET 3 A 3 GLN A 59 THR A 65 -1 O THR A 65 N LYS A 50 SHEET 1 B 6 GLU A 34 LYS A 38 0 SHEET 2 B 6 LYS A 42 LYS A 47 -1 O ILE A 44 N ILE A 37 SHEET 3 B 6 ALA A 68 GLU A 76 -1 O ARG A 69 N ILE A 45 SHEET 4 B 6 ALA B 68 SER B 72 -1 O GLU B 70 N GLU A 74 SHEET 5 B 6 LYS B 42 LYS B 47 -1 N GLU B 43 O ARG B 71 SHEET 6 B 6 GLU B 34 LYS B 38 -1 N ILE B 37 O ILE B 44 SHEET 1 C 4 GLU A 34 LYS A 38 0 SHEET 2 C 4 LYS A 42 LYS A 47 -1 O ILE A 44 N ILE A 37 SHEET 3 C 4 ALA A 68 GLU A 76 -1 O ARG A 69 N ILE A 45 SHEET 4 C 4 GLU B 76 MSE B 77 -1 O GLU B 76 N GLU A 70 SHEET 1 D 3 LYS B 27 ASP B 28 0 SHEET 2 D 3 LYS B 50 PHE B 56 -1 O VAL B 53 N LYS B 27 SHEET 3 D 3 GLN B 59 THR B 65 -1 O THR B 65 N LYS B 50 LINK C ASP A 25 N MSE A 26 1555 1555 1.34 LINK C MSE A 26 N LYS A 27 1555 1555 1.33 LINK C VAL A 53 N MSE A 54 1555 1555 1.33 LINK C MSE A 54 N GLU A 55 1555 1555 1.33 LINK C PHE A 56 N MSE A 57 1555 1555 1.33 LINK C MSE A 57 N GLY A 58 1555 1555 1.33 LINK C GLU A 76 N MSE A 77 1555 1555 1.33 LINK C MSE A 77 N GLU A 78 1555 1555 1.33 LINK C VAL A 87 N MSE A 88 1555 1555 1.33 LINK C MSE A 88 N ASN A 89 1555 1555 1.33 LINK C ILE A 113 N MSE A 114 1555 1555 1.33 LINK C MSE A 114 N ARG A 115 1555 1555 1.33 LINK C ASP B 25 N MSE B 26 1555 1555 1.33 LINK C MSE B 26 N LYS B 27 1555 1555 1.33 LINK C VAL B 53 N MSE B 54 1555 1555 1.33 LINK C MSE B 54 N GLU B 55 1555 1555 1.33 LINK C PHE B 56 N MSE B 57 1555 1555 1.33 LINK C MSE B 57 N GLY B 58 1555 1555 1.33 LINK C GLU B 76 N MSE B 77 1555 1555 1.33 LINK C MSE B 77 N GLU B 78 1555 1555 1.33 LINK C VAL B 87 N MSE B 88 1555 1555 1.33 LINK C MSE B 88 N ASN B 89 1555 1555 1.33 LINK C ILE B 113 N MSE B 114 1555 1555 1.32 LINK C MSE B 114 N ARG B 115 1555 1555 1.33 CRYST1 90.890 90.890 49.476 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011003 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011003 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020212 0.00000