HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 21-JUN-04 1TSJ TITLE CRYSTAL STRUCTURE OF PROTEIN FROM STAPHYLOCOCCUS AUREUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONSERVED HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS; SOURCE 3 ORGANISM_TAXID: 46170; SOURCE 4 STRAIN: SUBSP. AUREUS; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET26B KEYWDS CONSERVED HYPOTHETICAL PROTEIN, STRUCTURAL GENOMICS, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, PSI, NYSGXRC, NEW YORK SGX RESEARCH CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR T.MIN,J.GORMAN,L.SHAPIRO,S.K.BURLEY,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (NYSGXRC) REVDAT 5 03-FEB-21 1TSJ 1 AUTHOR REMARK SEQADV LINK REVDAT 4 13-JUL-11 1TSJ 1 VERSN REVDAT 3 24-FEB-09 1TSJ 1 VERSN REVDAT 2 25-JAN-05 1TSJ 1 KEYWDS REVDAT 1 14-DEC-04 1TSJ 0 JRNL AUTH T.MIN,J.GORMAN,L.SHAPIRO JRNL TITL THE CRYSTAL STRUCTURE OF CONSERVED HYPOTHETICAL PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.9999 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 4422 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 213 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 REFLECTION IN BIN (WORKING SET) : 317 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 902 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 22 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.64000 REMARK 3 B22 (A**2) : -0.64000 REMARK 3 B33 (A**2) : 0.96000 REMARK 3 B12 (A**2) : -0.32000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.319 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.207 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.019 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.888 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 922 ; 0.050 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 838 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1246 ; 2.899 ; 1.946 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1947 ; 1.252 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 113 ; 8.787 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 38 ;45.967 ;25.526 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 151 ;19.195 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 1 ;17.741 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 142 ; 0.157 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1003 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 181 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 215 ; 0.257 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 896 ; 0.235 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 641 ; 0.118 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 31 ; 0.179 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 2 ; 0.054 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 8 ; 0.147 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 29 ; 0.173 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.193 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 603 ; 2.942 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 235 ; 0.657 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 932 ; 3.760 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 375 ; 5.123 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 314 ; 7.289 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 1951 ; 3.416 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 22 ;15.790 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 1740 ; 3.207 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1TSJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JUL-04. REMARK 100 THE DEPOSITION ID IS D_1000022873. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-FEB-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : VERTICAL AND HORIZONTAL FOCUSING REMARK 200 MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5836 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 70.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.00 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 20.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 32% PEG4K, 0.1M NA ACETATE PH 4.6, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 12.17333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 24.34667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 12.17333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 24.34667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 2510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 83.84700 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 40 REMARK 465 ASN A 41 REMARK 465 GLY A 42 REMARK 465 PRO A 43 REMARK 465 GLY A 44 REMARK 465 ALA A 70 REMARK 465 ASN A 71 REMARK 465 SER A 72 REMARK 465 GLY A 73 REMARK 465 THR A 74 REMARK 465 GLU A 75 REMARK 465 LEU A 76 REMARK 465 GLU A 134 REMARK 465 GLY A 135 REMARK 465 GLY A 136 REMARK 465 SER A 137 REMARK 465 HIS A 138 REMARK 465 HIS A 139 REMARK 465 HIS A 140 REMARK 465 HIS A 141 REMARK 465 HIS A 142 REMARK 465 HIS A 143 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 5 CG CD CE NZ REMARK 470 ASP A 65 CG OD1 OD2 REMARK 470 LYS A 85 CG CD CE NZ REMARK 470 THR A 87 CB OG1 CG2 REMARK 470 GLU A 89 CB CG CD OE1 OE2 REMARK 470 GLU A 100 CG CD OE1 OE2 REMARK 470 ARG A 114 CD NE CZ NH1 NH2 REMARK 470 GLU A 133 CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 18 CD GLU A 18 OE1 0.119 REMARK 500 GLU A 18 CD GLU A 18 OE2 0.094 REMARK 500 GLU A 28 CD GLU A 28 OE2 0.080 REMARK 500 TYR A 38 CG TYR A 38 CD2 0.079 REMARK 500 TYR A 38 CD1 TYR A 38 CE1 -0.111 REMARK 500 GLU A 91 CD GLU A 91 OE1 0.099 REMARK 500 MSE A 110 SE MSE A 110 CE 0.502 REMARK 500 GLU A 115 CD GLU A 115 OE1 0.075 REMARK 500 TRP A 118 CE3 TRP A 118 CZ3 0.118 REMARK 500 PHE A 123 CB PHE A 123 CG -0.114 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 121 CB - CG - OD2 ANGL. DEV. = 7.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 13 -75.84 -71.32 REMARK 500 GLU A 28 -86.44 -74.97 REMARK 500 GLU A 31 139.64 -170.25 REMARK 500 ILE A 78 42.52 -145.04 REMARK 500 SER A 79 -179.87 -46.85 REMARK 500 GLU A 100 25.17 45.61 REMARK 500 PRO A 112 22.39 -71.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-T1626 RELATED DB: TARGETDB DBREF 1TSJ A 1 129 UNP Q8NX24 Q8NX24_STAAW 1 133 SEQADV 1TSJ MSE A 11 UNP Q8NX24 MET 11 MODIFIED RESIDUE SEQADV 1TSJ MSE A 35 UNP Q8NX24 MET 35 MODIFIED RESIDUE SEQADV 1TSJ MSE A 62 UNP Q8NX24 MET 62 MODIFIED RESIDUE SEQADV 1TSJ A UNP Q8NX24 MET 74 DELETION SEQADV 1TSJ A UNP Q8NX24 ASN 75 DELETION SEQADV 1TSJ A UNP Q8NX24 PRO 76 DELETION SEQADV 1TSJ A UNP Q8NX24 ALA 77 DELETION SEQADV 1TSJ MSE A 90 UNP Q8NX24 MET 90 MODIFIED RESIDUE SEQADV 1TSJ MSE A 105 UNP Q8NX24 MET 105 MODIFIED RESIDUE SEQADV 1TSJ MSE A 110 UNP Q8NX24 MET 110 MODIFIED RESIDUE SEQADV 1TSJ GLU A 134 UNP Q8NX24 CLONING ARTIFACT SEQADV 1TSJ GLY A 135 UNP Q8NX24 CLONING ARTIFACT SEQADV 1TSJ GLY A 136 UNP Q8NX24 CLONING ARTIFACT SEQADV 1TSJ SER A 137 UNP Q8NX24 CLONING ARTIFACT SEQADV 1TSJ HIS A 138 UNP Q8NX24 EXPRESSION TAG SEQADV 1TSJ HIS A 139 UNP Q8NX24 EXPRESSION TAG SEQADV 1TSJ HIS A 140 UNP Q8NX24 EXPRESSION TAG SEQADV 1TSJ HIS A 141 UNP Q8NX24 EXPRESSION TAG SEQADV 1TSJ HIS A 138 UNP Q8NX24 EXPRESSION TAG SEQADV 1TSJ HIS A 139 UNP Q8NX24 EXPRESSION TAG SEQRES 1 A 139 MET ASP ILE PRO LYS ILE THR THR PHE LEU MSE PHE ASN SEQRES 2 A 139 ASN GLN ALA GLU GLU ALA VAL LYS LEU TYR THR SER LEU SEQRES 3 A 139 PHE GLU ASP SER GLU ILE ILE THR MSE ALA LYS TYR GLY SEQRES 4 A 139 GLU ASN GLY PRO GLY ASP PRO GLY THR VAL GLN HIS SER SEQRES 5 A 139 ILE PHE THR LEU ASN GLY GLN VAL PHE MSE ALA ILE ASP SEQRES 6 A 139 ALA ASN SER GLY THR GLU LEU PRO ILE SER LEU PHE VAL SEQRES 7 A 139 THR VAL LYS ASP THR ILE GLU MSE GLU ARG LEU PHE ASN SEQRES 8 A 139 GLY LEU LYS ASP GLU GLY ALA ILE LEU MSE PRO LYS THR SEQRES 9 A 139 ASN MSE PRO PRO TYR ARG GLU PHE ALA TRP VAL GLN ASP SEQRES 10 A 139 LYS PHE GLY VAL SER PHE GLN LEU ALA LEU PRO GLU GLU SEQRES 11 A 139 GLY GLY SER HIS HIS HIS HIS HIS HIS MODRES 1TSJ MSE A 11 MET SELENOMETHIONINE MODRES 1TSJ MSE A 35 MET SELENOMETHIONINE MODRES 1TSJ MSE A 62 MET SELENOMETHIONINE MODRES 1TSJ MSE A 90 MET SELENOMETHIONINE MODRES 1TSJ MSE A 105 MET SELENOMETHIONINE MODRES 1TSJ MSE A 110 MET SELENOMETHIONINE HET MSE A 11 8 HET MSE A 35 8 HET MSE A 62 8 HET MSE A 90 8 HET MSE A 105 8 HET MSE A 110 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 2 HOH *22(H2 O) HELIX 1 1 GLN A 15 PHE A 27 1 13 HELIX 2 2 ASP A 86 ASP A 99 1 14 SHEET 1 A 8 GLU A 31 LYS A 37 0 SHEET 2 A 8 VAL A 49 LEU A 56 -1 O GLN A 50 N ALA A 36 SHEET 3 A 8 GLN A 59 ILE A 64 -1 O PHE A 61 N PHE A 54 SHEET 4 A 8 ILE A 6 MSE A 11 1 N LEU A 10 O MSE A 62 SHEET 5 A 8 LEU A 80 THR A 83 -1 O PHE A 81 N THR A 7 SHEET 6 A 8 SER A 126 LEU A 131 1 O GLN A 128 N VAL A 82 SHEET 7 A 8 TYR A 113 GLN A 120 -1 N GLU A 115 O LEU A 131 SHEET 8 A 8 ALA A 102 MSE A 110 -1 N MSE A 105 O TRP A 118 LINK C LEU A 10 N MSE A 11 1555 1555 1.31 LINK C MSE A 11 N PHE A 12 1555 1555 1.33 LINK C THR A 34 N MSE A 35 1555 1555 1.33 LINK C MSE A 35 N ALA A 36 1555 1555 1.33 LINK C PHE A 61 N MSE A 62 1555 1555 1.29 LINK C MSE A 62 N ALA A 63 1555 1555 1.33 LINK C GLU A 89 N MSE A 90 1555 1555 1.31 LINK C MSE A 90 N GLU A 91 1555 1555 1.32 LINK C LEU A 104 N MSE A 105 1555 1555 1.31 LINK C MSE A 105 N PRO A 106 1555 1555 1.33 LINK C ASN A 109 N MSE A 110 1555 1555 1.29 LINK C MSE A 110 N PRO A 111 1555 1555 1.34 CISPEP 1 PRO A 111 PRO A 112 0 -13.07 CRYST1 83.847 83.847 36.520 90.00 90.00 120.00 P 64 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011926 0.006886 0.000000 0.00000 SCALE2 0.000000 0.013772 0.000000 0.00000 SCALE3 0.000000 0.000000 0.027382 0.00000