data_1TWQ # _entry.id 1TWQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1TWQ pdb_00001twq 10.2210/pdb1twq/pdb RCSB RCSB022978 ? ? WWPDB D_1000022978 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-12-14 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-11-16 5 'Structure model' 1 4 2017-10-11 6 'Structure model' 1 5 2020-07-29 7 'Structure model' 1 6 2023-08-23 8 'Structure model' 2 0 2023-11-15 9 'Structure model' 3 0 2024-02-28 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 6 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 5 'Structure model' Advisory 5 5 'Structure model' 'Refinement description' 6 6 'Structure model' Advisory 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Derived calculations' 9 6 'Structure model' 'Structure summary' 10 7 'Structure model' 'Data collection' 11 7 'Structure model' 'Database references' 12 7 'Structure model' 'Refinement description' 13 7 'Structure model' 'Structure summary' 14 8 'Structure model' 'Atomic model' 15 8 'Structure model' 'Data collection' 16 8 'Structure model' 'Derived calculations' 17 9 'Structure model' Advisory 18 9 'Structure model' 'Atomic model' 19 9 'Structure model' 'Data collection' 20 9 'Structure model' 'Database references' 21 9 'Structure model' 'Derived calculations' 22 9 'Structure model' 'Polymer sequence' 23 9 'Structure model' 'Source and taxonomy' 24 9 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' pdbx_validate_polymer_linkage 2 5 'Structure model' software 3 6 'Structure model' chem_comp 4 6 'Structure model' database_PDB_caveat 5 6 'Structure model' pdbx_chem_comp_identifier 6 6 'Structure model' pdbx_struct_conn_angle 7 6 'Structure model' struct_conn 8 6 'Structure model' struct_site 9 6 'Structure model' struct_site_gen 10 7 'Structure model' chem_comp 11 7 'Structure model' chem_comp_atom 12 7 'Structure model' chem_comp_bond 13 7 'Structure model' database_2 14 7 'Structure model' pdbx_initial_refinement_model 15 8 'Structure model' atom_site 16 8 'Structure model' chem_comp_atom 17 8 'Structure model' chem_comp_bond 18 8 'Structure model' pdbx_validate_rmsd_angle 19 8 'Structure model' struct_conn 20 9 'Structure model' atom_site 21 9 'Structure model' database_PDB_caveat 22 9 'Structure model' entity 23 9 'Structure model' entity_name_com 24 9 'Structure model' entity_poly 25 9 'Structure model' entity_poly_seq 26 9 'Structure model' entity_src_gen 27 9 'Structure model' pdbx_entity_nonpoly 28 9 'Structure model' pdbx_entity_src_syn 29 9 'Structure model' pdbx_nonpoly_scheme 30 9 'Structure model' pdbx_poly_seq_scheme 31 9 'Structure model' pdbx_struct_assembly_gen 32 9 'Structure model' pdbx_struct_conn_angle 33 9 'Structure model' pdbx_struct_mod_residue 34 9 'Structure model' pdbx_struct_special_symmetry 35 9 'Structure model' pdbx_validate_chiral 36 9 'Structure model' struct_asym 37 9 'Structure model' struct_conn 38 9 'Structure model' struct_ref 39 9 'Structure model' struct_ref_seq # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_chem_comp.name' 2 6 'Structure model' '_chem_comp.type' 3 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 6 'Structure model' '_pdbx_struct_conn_angle.value' 16 6 'Structure model' '_struct_conn.conn_type_id' 17 6 'Structure model' '_struct_conn.id' 18 6 'Structure model' '_struct_conn.pdbx_dist_value' 19 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 20 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 21 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 6 'Structure model' '_struct_conn.ptnr1_symmetry' 28 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 29 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 30 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 33 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 34 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 35 6 'Structure model' '_struct_conn.ptnr2_symmetry' 36 7 'Structure model' '_chem_comp.pdbx_synonyms' 37 7 'Structure model' '_database_2.pdbx_DOI' 38 7 'Structure model' '_database_2.pdbx_database_accession' 39 8 'Structure model' '_atom_site.auth_atom_id' 40 8 'Structure model' '_atom_site.label_atom_id' 41 8 'Structure model' '_chem_comp_atom.atom_id' 42 8 'Structure model' '_chem_comp_bond.atom_id_1' 43 8 'Structure model' '_chem_comp_bond.atom_id_2' 44 8 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 45 8 'Structure model' '_struct_conn.ptnr1_label_atom_id' 46 9 'Structure model' '_atom_site.B_iso_or_equiv' 47 9 'Structure model' '_atom_site.Cartn_x' 48 9 'Structure model' '_atom_site.Cartn_y' 49 9 'Structure model' '_atom_site.Cartn_z' 50 9 'Structure model' '_atom_site.auth_asym_id' 51 9 'Structure model' '_atom_site.auth_atom_id' 52 9 'Structure model' '_atom_site.auth_comp_id' 53 9 'Structure model' '_atom_site.auth_seq_id' 54 9 'Structure model' '_atom_site.group_PDB' 55 9 'Structure model' '_atom_site.label_asym_id' 56 9 'Structure model' '_atom_site.label_atom_id' 57 9 'Structure model' '_atom_site.label_comp_id' 58 9 'Structure model' '_atom_site.label_entity_id' 59 9 'Structure model' '_atom_site.label_seq_id' 60 9 'Structure model' '_atom_site.occupancy' 61 9 'Structure model' '_atom_site.type_symbol' 62 9 'Structure model' '_database_PDB_caveat.text' 63 9 'Structure model' '_entity_poly.pdbx_seq_one_letter_code' 64 9 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 65 9 'Structure model' '_entity_src_gen.pdbx_beg_seq_num' 66 9 'Structure model' '_entity_src_gen.pdbx_end_seq_num' 67 9 'Structure model' '_entity_src_gen.pdbx_gene_src_gene' 68 9 'Structure model' '_entity_src_gen.pdbx_seq_type' 69 9 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 70 9 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 71 9 'Structure model' '_pdbx_entity_src_syn.pdbx_beg_seq_num' 72 9 'Structure model' '_pdbx_entity_src_syn.pdbx_end_seq_num' 73 9 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 74 9 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 75 9 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 76 9 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 77 9 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 78 9 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 79 9 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 80 9 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 81 9 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 82 9 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 83 9 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 84 9 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 85 9 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 86 9 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 87 9 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 88 9 'Structure model' '_pdbx_struct_conn_angle.value' 89 9 'Structure model' '_pdbx_struct_mod_residue.label_seq_id' 90 9 'Structure model' '_pdbx_struct_special_symmetry.auth_seq_id' 91 9 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id' 92 9 'Structure model' '_pdbx_validate_chiral.auth_atom_id' 93 9 'Structure model' '_pdbx_validate_chiral.auth_comp_id' 94 9 'Structure model' '_pdbx_validate_chiral.auth_seq_id' 95 9 'Structure model' '_struct_conn.pdbx_dist_value' 96 9 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 97 9 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 98 9 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 99 9 'Structure model' '_struct_conn.ptnr1_label_asym_id' 100 9 'Structure model' '_struct_conn.ptnr1_label_atom_id' 101 9 'Structure model' '_struct_conn.ptnr1_label_comp_id' 102 9 'Structure model' '_struct_conn.ptnr1_label_seq_id' 103 9 'Structure model' '_struct_conn.ptnr1_symmetry' 104 9 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 105 9 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 106 9 'Structure model' '_struct_conn.ptnr2_label_asym_id' 107 9 'Structure model' '_struct_conn.ptnr2_label_atom_id' 108 9 'Structure model' '_struct_conn.ptnr2_label_comp_id' 109 9 'Structure model' '_struct_conn.ptnr2_label_seq_id' 110 9 'Structure model' '_struct_ref.db_code' 111 9 'Structure model' '_struct_ref.pdbx_align_begin' 112 9 'Structure model' '_struct_ref_seq.db_align_beg' 113 9 'Structure model' '_struct_ref_seq.pdbx_auth_seq_align_beg' 114 9 'Structure model' '_struct_ref_seq.seq_align_end' # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'GMA P 997 HAS WRONG CHIRALITY AT ATOM CA' 2 'AMU P 1001 HAS WRONG CHIRALITY AT ATOM C1' # _pdbx_database_status.entry_id 1TWQ _pdbx_database_status.status_code REL _pdbx_database_status.recvd_initial_deposition_date 2004-07-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1SK3 'crystal structure of the C-terminal PGN-binding domain of human PGRP-Ialpha (form I)' unspecified PDB 1SK4 'crystal structure of the C-terminal PGN-binding domain of human PGRP-Ialpha (form II)' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Guan, R.' 1 'Roychowdury, A.' 2 'Boons, G.-A.' 3 'Mariuzza, R.A.' 4 # _citation.id primary _citation.title 'Structural basis for peptidoglycan binding by peptidoglycan recognition proteins' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 101 _citation.page_first 17168 _citation.page_last 17173 _citation.year 2004 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15572450 _citation.pdbx_database_id_DOI 10.1073/pnas.0407856101 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Guan, R.' 1 ? primary 'Roychowdhury, A.' 2 ? primary 'Ember, B.' 3 ? primary 'Kumar, S.' 4 ? primary 'Boons, G.-A.' 5 ? primary 'Mariuzza, R.A.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'peptidoglycan recognition protein-I-alpha' 18271.795 1 ? ? 'C-terminal domain' 'complexed with PGN fragment (AMU)A(GMA)K(NH2)' 2 polymer syn 'muramyl tripeptide' 344.409 1 ? ? 'PGN fragment' ? 3 non-polymer syn 'NICKEL (II) ION' 58.693 1 ? ? ? ? 4 non-polymer man 'N-acetyl-beta-muramic acid' 293.270 1 ? ? ? ? 5 water nat water 18.015 48 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;VCPNIIKRSAWEARETHCPKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFCDIGYHFLVGQDGGVYEGV GWHIQGSHTYGFNDIALGIAFIGYFVEKPPNAAALEAAQDLIQCAVVEGYLTPNYLLMGHSDVVNILSPGQALYNIISTW PHFKH ; ;VCPNIIKRSAWEARETHCPKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFCDIGYHFLVGQDGGVYEGV GWHIQGSHTYGFNDIALGIAFIGYFVEKPPNAAALEAAQDLIQCAVVEGYLTPNYLLMGHSDVVNILSPGQALYNIISTW PHFKH ; A ? 2 'polypeptide(L)' no yes 'A(GMA)K(NH2)' AEKX P ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'NICKEL (II) ION' NI 4 'N-acetyl-beta-muramic acid' AMU 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 CYS n 1 3 PRO n 1 4 ASN n 1 5 ILE n 1 6 ILE n 1 7 LYS n 1 8 ARG n 1 9 SER n 1 10 ALA n 1 11 TRP n 1 12 GLU n 1 13 ALA n 1 14 ARG n 1 15 GLU n 1 16 THR n 1 17 HIS n 1 18 CYS n 1 19 PRO n 1 20 LYS n 1 21 MET n 1 22 ASN n 1 23 LEU n 1 24 PRO n 1 25 ALA n 1 26 LYS n 1 27 TYR n 1 28 VAL n 1 29 ILE n 1 30 ILE n 1 31 ILE n 1 32 HIS n 1 33 THR n 1 34 ALA n 1 35 GLY n 1 36 THR n 1 37 SER n 1 38 CYS n 1 39 THR n 1 40 VAL n 1 41 SER n 1 42 THR n 1 43 ASP n 1 44 CYS n 1 45 GLN n 1 46 THR n 1 47 VAL n 1 48 VAL n 1 49 ARG n 1 50 ASN n 1 51 ILE n 1 52 GLN n 1 53 SER n 1 54 PHE n 1 55 HIS n 1 56 MET n 1 57 ASP n 1 58 THR n 1 59 ARG n 1 60 ASN n 1 61 PHE n 1 62 CYS n 1 63 ASP n 1 64 ILE n 1 65 GLY n 1 66 TYR n 1 67 HIS n 1 68 PHE n 1 69 LEU n 1 70 VAL n 1 71 GLY n 1 72 GLN n 1 73 ASP n 1 74 GLY n 1 75 GLY n 1 76 VAL n 1 77 TYR n 1 78 GLU n 1 79 GLY n 1 80 VAL n 1 81 GLY n 1 82 TRP n 1 83 HIS n 1 84 ILE n 1 85 GLN n 1 86 GLY n 1 87 SER n 1 88 HIS n 1 89 THR n 1 90 TYR n 1 91 GLY n 1 92 PHE n 1 93 ASN n 1 94 ASP n 1 95 ILE n 1 96 ALA n 1 97 LEU n 1 98 GLY n 1 99 ILE n 1 100 ALA n 1 101 PHE n 1 102 ILE n 1 103 GLY n 1 104 TYR n 1 105 PHE n 1 106 VAL n 1 107 GLU n 1 108 LYS n 1 109 PRO n 1 110 PRO n 1 111 ASN n 1 112 ALA n 1 113 ALA n 1 114 ALA n 1 115 LEU n 1 116 GLU n 1 117 ALA n 1 118 ALA n 1 119 GLN n 1 120 ASP n 1 121 LEU n 1 122 ILE n 1 123 GLN n 1 124 CYS n 1 125 ALA n 1 126 VAL n 1 127 VAL n 1 128 GLU n 1 129 GLY n 1 130 TYR n 1 131 LEU n 1 132 THR n 1 133 PRO n 1 134 ASN n 1 135 TYR n 1 136 LEU n 1 137 LEU n 1 138 MET n 1 139 GLY n 1 140 HIS n 1 141 SER n 1 142 ASP n 1 143 VAL n 1 144 VAL n 1 145 ASN n 1 146 ILE n 1 147 LEU n 1 148 SER n 1 149 PRO n 1 150 GLY n 1 151 GLN n 1 152 ALA n 1 153 LEU n 1 154 TYR n 1 155 ASN n 1 156 ILE n 1 157 ILE n 1 158 SER n 1 159 THR n 1 160 TRP n 1 161 PRO n 1 162 HIS n 1 163 PHE n 1 164 LYS n 1 165 HIS n 2 1 ALA n 2 2 GMA n 2 3 LYS n 2 4 NH2 n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 165 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'PGLYRP3, PGRPIA' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pT7-7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 4 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details 'the muramyl tripeptide exists in all baterial peptidoglycans' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 AMU 'D-saccharide, beta linking' . 'N-acetyl-beta-muramic acid' 'N-acetyl-muramic acid; BETA-N-ACETYLMURAMIC ACID' 'C11 H19 N O8' 293.270 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GMA 'L-peptide linking' n '4-AMIDO-4-CARBAMOYL-BUTYRIC ACID' ? 'C5 H10 N2 O3' 146.144 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier AMU 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc3 AMU 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 MurNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 177 177 VAL VAL A . n A 1 2 CYS 2 178 178 CYS CYS A . n A 1 3 PRO 3 179 179 PRO PRO A . n A 1 4 ASN 4 180 180 ASN ASN A . n A 1 5 ILE 5 181 181 ILE ILE A . n A 1 6 ILE 6 182 182 ILE ILE A . n A 1 7 LYS 7 183 183 LYS LYS A . n A 1 8 ARG 8 184 184 ARG ARG A . n A 1 9 SER 9 185 185 SER SER A . n A 1 10 ALA 10 186 186 ALA ALA A . n A 1 11 TRP 11 187 187 TRP TRP A . n A 1 12 GLU 12 188 188 GLU GLU A . n A 1 13 ALA 13 189 189 ALA ALA A . n A 1 14 ARG 14 190 190 ARG ARG A . n A 1 15 GLU 15 191 191 GLU GLU A . n A 1 16 THR 16 192 192 THR THR A . n A 1 17 HIS 17 193 193 HIS HIS A . n A 1 18 CYS 18 194 194 CYS CYS A . n A 1 19 PRO 19 195 195 PRO PRO A . n A 1 20 LYS 20 196 196 LYS LYS A . n A 1 21 MET 21 197 197 MET MET A . n A 1 22 ASN 22 198 198 ASN ASN A . n A 1 23 LEU 23 199 199 LEU LEU A . n A 1 24 PRO 24 200 200 PRO PRO A . n A 1 25 ALA 25 201 201 ALA ALA A . n A 1 26 LYS 26 202 202 LYS LYS A . n A 1 27 TYR 27 203 203 TYR TYR A . n A 1 28 VAL 28 204 204 VAL VAL A . n A 1 29 ILE 29 205 205 ILE ILE A . n A 1 30 ILE 30 206 206 ILE ILE A . n A 1 31 ILE 31 207 207 ILE ILE A . n A 1 32 HIS 32 208 208 HIS HIS A . n A 1 33 THR 33 209 209 THR THR A . n A 1 34 ALA 34 210 210 ALA ALA A . n A 1 35 GLY 35 211 211 GLY GLY A . n A 1 36 THR 36 212 212 THR THR A . n A 1 37 SER 37 213 213 SER SER A . n A 1 38 CYS 38 214 214 CYS CYS A . n A 1 39 THR 39 215 215 THR THR A . n A 1 40 VAL 40 216 216 VAL VAL A . n A 1 41 SER 41 217 217 SER SER A . n A 1 42 THR 42 218 218 THR THR A . n A 1 43 ASP 43 219 219 ASP ASP A . n A 1 44 CYS 44 220 220 CYS CYS A . n A 1 45 GLN 45 221 221 GLN GLN A . n A 1 46 THR 46 222 222 THR THR A . n A 1 47 VAL 47 223 223 VAL VAL A . n A 1 48 VAL 48 224 224 VAL VAL A . n A 1 49 ARG 49 225 225 ARG ARG A . n A 1 50 ASN 50 226 226 ASN ASN A . n A 1 51 ILE 51 227 227 ILE ILE A . n A 1 52 GLN 52 228 228 GLN GLN A . n A 1 53 SER 53 229 229 SER SER A . n A 1 54 PHE 54 230 230 PHE PHE A . n A 1 55 HIS 55 231 231 HIS HIS A . n A 1 56 MET 56 232 232 MET MET A . n A 1 57 ASP 57 233 233 ASP ASP A . n A 1 58 THR 58 234 234 THR THR A . n A 1 59 ARG 59 235 235 ARG ARG A . n A 1 60 ASN 60 236 236 ASN ASN A . n A 1 61 PHE 61 237 237 PHE PHE A . n A 1 62 CYS 62 238 238 CYS CYS A . n A 1 63 ASP 63 239 239 ASP ASP A . n A 1 64 ILE 64 240 240 ILE ILE A . n A 1 65 GLY 65 241 241 GLY GLY A . n A 1 66 TYR 66 242 242 TYR TYR A . n A 1 67 HIS 67 243 243 HIS HIS A . n A 1 68 PHE 68 244 244 PHE PHE A . n A 1 69 LEU 69 245 245 LEU LEU A . n A 1 70 VAL 70 246 246 VAL VAL A . n A 1 71 GLY 71 247 247 GLY GLY A . n A 1 72 GLN 72 248 248 GLN GLN A . n A 1 73 ASP 73 249 249 ASP ASP A . n A 1 74 GLY 74 250 250 GLY GLY A . n A 1 75 GLY 75 251 251 GLY GLY A . n A 1 76 VAL 76 252 252 VAL VAL A . n A 1 77 TYR 77 253 253 TYR TYR A . n A 1 78 GLU 78 254 254 GLU GLU A . n A 1 79 GLY 79 255 255 GLY GLY A . n A 1 80 VAL 80 256 256 VAL VAL A . n A 1 81 GLY 81 257 257 GLY GLY A . n A 1 82 TRP 82 258 258 TRP TRP A . n A 1 83 HIS 83 259 259 HIS HIS A . n A 1 84 ILE 84 260 260 ILE ILE A . n A 1 85 GLN 85 261 261 GLN GLN A . n A 1 86 GLY 86 262 262 GLY GLY A . n A 1 87 SER 87 263 263 SER SER A . n A 1 88 HIS 88 264 264 HIS HIS A . n A 1 89 THR 89 265 265 THR THR A . n A 1 90 TYR 90 266 266 TYR TYR A . n A 1 91 GLY 91 267 267 GLY GLY A . n A 1 92 PHE 92 268 268 PHE PHE A . n A 1 93 ASN 93 269 269 ASN ASN A . n A 1 94 ASP 94 270 270 ASP ASP A . n A 1 95 ILE 95 271 271 ILE ILE A . n A 1 96 ALA 96 272 272 ALA ALA A . n A 1 97 LEU 97 273 273 LEU LEU A . n A 1 98 GLY 98 274 274 GLY GLY A . n A 1 99 ILE 99 275 275 ILE ILE A . n A 1 100 ALA 100 276 276 ALA ALA A . n A 1 101 PHE 101 277 277 PHE PHE A . n A 1 102 ILE 102 278 278 ILE ILE A . n A 1 103 GLY 103 279 279 GLY GLY A . n A 1 104 TYR 104 280 280 TYR TYR A . n A 1 105 PHE 105 281 281 PHE PHE A . n A 1 106 VAL 106 282 282 VAL VAL A . n A 1 107 GLU 107 283 283 GLU GLU A . n A 1 108 LYS 108 284 284 LYS LYS A . n A 1 109 PRO 109 285 285 PRO PRO A . n A 1 110 PRO 110 286 286 PRO PRO A . n A 1 111 ASN 111 287 287 ASN ASN A . n A 1 112 ALA 112 288 288 ALA ALA A . n A 1 113 ALA 113 289 289 ALA ALA A . n A 1 114 ALA 114 290 290 ALA ALA A . n A 1 115 LEU 115 291 291 LEU LEU A . n A 1 116 GLU 116 292 292 GLU GLU A . n A 1 117 ALA 117 293 293 ALA ALA A . n A 1 118 ALA 118 294 294 ALA ALA A . n A 1 119 GLN 119 295 295 GLN GLN A . n A 1 120 ASP 120 296 296 ASP ASP A . n A 1 121 LEU 121 297 297 LEU LEU A . n A 1 122 ILE 122 298 298 ILE ILE A . n A 1 123 GLN 123 299 299 GLN GLN A . n A 1 124 CYS 124 300 300 CYS CYS A . n A 1 125 ALA 125 301 301 ALA ALA A . n A 1 126 VAL 126 302 302 VAL VAL A . n A 1 127 VAL 127 303 303 VAL VAL A . n A 1 128 GLU 128 304 304 GLU GLU A . n A 1 129 GLY 129 305 305 GLY GLY A . n A 1 130 TYR 130 306 306 TYR TYR A . n A 1 131 LEU 131 307 307 LEU LEU A . n A 1 132 THR 132 308 308 THR THR A . n A 1 133 PRO 133 309 309 PRO PRO A . n A 1 134 ASN 134 310 310 ASN ASN A . n A 1 135 TYR 135 311 311 TYR TYR A . n A 1 136 LEU 136 312 312 LEU LEU A . n A 1 137 LEU 137 313 313 LEU LEU A . n A 1 138 MET 138 314 314 MET MET A . n A 1 139 GLY 139 315 315 GLY GLY A . n A 1 140 HIS 140 316 316 HIS HIS A . n A 1 141 SER 141 317 317 SER SER A . n A 1 142 ASP 142 318 318 ASP ASP A . n A 1 143 VAL 143 319 319 VAL VAL A . n A 1 144 VAL 144 320 320 VAL VAL A . n A 1 145 ASN 145 321 321 ASN ASN A . n A 1 146 ILE 146 322 322 ILE ILE A . n A 1 147 LEU 147 323 323 LEU LEU A . n A 1 148 SER 148 324 324 SER SER A . n A 1 149 PRO 149 325 325 PRO PRO A . n A 1 150 GLY 150 326 326 GLY GLY A . n A 1 151 GLN 151 327 327 GLN GLN A . n A 1 152 ALA 152 328 328 ALA ALA A . n A 1 153 LEU 153 329 329 LEU LEU A . n A 1 154 TYR 154 330 330 TYR TYR A . n A 1 155 ASN 155 331 331 ASN ASN A . n A 1 156 ILE 156 332 332 ILE ILE A . n A 1 157 ILE 157 333 333 ILE ILE A . n A 1 158 SER 158 334 334 SER SER A . n A 1 159 THR 159 335 335 THR THR A . n A 1 160 TRP 160 336 336 TRP TRP A . n A 1 161 PRO 161 337 337 PRO PRO A . n A 1 162 HIS 162 338 338 HIS HIS A . n A 1 163 PHE 163 339 339 PHE PHE A . n A 1 164 LYS 164 340 340 LYS LYS A . n A 1 165 HIS 165 341 341 HIS HIS A . n B 2 1 ALA 1 996 996 ALA ALA P . n B 2 2 GMA 2 997 997 GMA GMA P . n B 2 3 LYS 3 998 998 LYS LYS P . n B 2 4 NH2 4 999 999 NH2 NH2 P . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NI 1 900 900 NI NI A . D 4 AMU 1 1001 995 AMU AMU P . E 5 HOH 1 1001 25 HOH HOH A . E 5 HOH 2 1002 6 HOH HOH A . E 5 HOH 3 1003 1 HOH HOH A . E 5 HOH 4 1004 28 HOH HOH A . E 5 HOH 5 1005 38 HOH HOH A . E 5 HOH 6 1006 2 HOH HOH A . E 5 HOH 7 1007 7 HOH HOH A . E 5 HOH 8 1008 37 HOH HOH A . E 5 HOH 9 1009 19 HOH HOH A . E 5 HOH 10 1010 11 HOH HOH A . E 5 HOH 11 1011 22 HOH HOH A . E 5 HOH 12 1012 12 HOH HOH A . E 5 HOH 13 1013 31 HOH HOH A . E 5 HOH 14 1014 44 HOH HOH A . E 5 HOH 15 1015 48 HOH HOH A . E 5 HOH 16 1016 20 HOH HOH A . E 5 HOH 17 1017 24 HOH HOH A . E 5 HOH 18 1018 13 HOH HOH A . E 5 HOH 19 1019 36 HOH HOH A . E 5 HOH 20 1020 10 HOH HOH A . E 5 HOH 21 1021 9 HOH HOH A . E 5 HOH 22 1022 16 HOH HOH A . E 5 HOH 23 1023 8 HOH HOH A . E 5 HOH 24 1024 3 HOH HOH A . E 5 HOH 25 1025 32 HOH HOH A . E 5 HOH 26 1026 26 HOH HOH A . E 5 HOH 27 1027 14 HOH HOH A . E 5 HOH 28 1028 18 HOH HOH A . E 5 HOH 29 1029 21 HOH HOH A . E 5 HOH 30 1030 41 HOH HOH A . E 5 HOH 31 1031 35 HOH HOH A . E 5 HOH 32 1032 5 HOH HOH A . E 5 HOH 33 1033 33 HOH HOH A . E 5 HOH 34 1034 45 HOH HOH A . E 5 HOH 35 1035 30 HOH HOH A . E 5 HOH 36 1036 17 HOH HOH A . E 5 HOH 37 1037 47 HOH HOH A . E 5 HOH 38 1038 39 HOH HOH A . E 5 HOH 39 1039 29 HOH HOH A . E 5 HOH 40 1040 27 HOH HOH A . E 5 HOH 41 1041 15 HOH HOH A . E 5 HOH 42 1042 43 HOH HOH A . E 5 HOH 43 1043 42 HOH HOH A . E 5 HOH 44 1044 34 HOH HOH A . E 5 HOH 45 1045 46 HOH HOH A . E 5 HOH 46 1046 23 HOH HOH A . E 5 HOH 47 1047 4 HOH HOH A . F 5 HOH 1 1101 40 HOH HOH P . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 CrystalClear 'data reduction' . ? 2 AMoRE phasing . ? 3 CNS refinement 1.1 ? 4 CrystalClear 'data scaling' '(MSC/RIGAKU)' ? 5 # _cell.entry_id 1TWQ _cell.length_a 104.511 _cell.length_b 104.511 _cell.length_c 42.050 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TWQ _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.cell_setting trigonal _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1TWQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 64.05 _exptl_crystal.density_Matthews 3.42 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details 'PEG MME 2000, Nickel sulfate, Tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 173 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2004-05-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI 111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1TWQ _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 26.54 _reflns.d_resolution_high 2.30 _reflns.number_obs 11464 _reflns.number_all 11464 _reflns.percent_possible_obs 95.8 _reflns.pdbx_Rmerge_I_obs 0.071 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.8 _reflns.B_iso_Wilson_estimate 27.3 _reflns.pdbx_redundancy 5.43 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_all 93.5 _reflns_shell.Rmerge_I_obs 0.328 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.5 _reflns_shell.pdbx_redundancy 5.08 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1096 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1TWQ _refine.ls_number_reflns_obs 11464 _refine.ls_number_reflns_all 11464 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF 1059174.25 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 26.54 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 95.7 _refine.ls_R_factor_obs 0.2221 _refine.ls_R_factor_all 0.2221 _refine.ls_R_factor_R_work 0.222 _refine.ls_R_factor_R_free 0.252 _refine.ls_R_factor_R_free_error 0.011 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 592 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 32.8 _refine.aniso_B[1][1] 1.28 _refine.aniso_B[2][2] 1.28 _refine.aniso_B[3][3] -2.55 _refine.aniso_B[1][2] 3.78 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.3328 _refine.solvent_model_param_bsol 36.9163 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB entry 1SK3' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1TWQ _refine_analyze.Luzzati_coordinate_error_obs 0.30 _refine_analyze.Luzzati_sigma_a_obs 0.33 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.37 _refine_analyze.Luzzati_sigma_a_free 0.39 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1329 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 48 _refine_hist.number_atoms_total 1378 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 26.54 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.2 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.85 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.30 _refine_ls_shell.d_res_low 2.44 _refine_ls_shell.number_reflns_R_work 1751 _refine_ls_shell.R_factor_R_work 0.285 _refine_ls_shell.percent_reflns_obs 93.5 _refine_ls_shell.R_factor_R_free 0.309 _refine_ls_shell.R_factor_R_free_error 0.032 _refine_ls_shell.percent_reflns_R_free 5.0 _refine_ls_shell.number_reflns_R_free 93 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 MTP.PAR ? 'X-RAY DIFFRACTION' 3 WATER.PARAM ? 'X-RAY DIFFRACTION' 4 ION.PARAM ? 'X-RAY DIFFRACTION' # _struct.entry_id 1TWQ _struct.title 'Crystal structure of the C-terminal PGN-binding domain of human PGRP-Ialpha in complex with PGN analog muramyl tripeptide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1TWQ _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM, MEMBRANE PROTEIN' _struct_keywords.text 'crystal structure; complex; PGRP; PGRP-Ialpha; PGN analog, IMMUNE SYSTEM, MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP PGRP3_HUMAN Q96LB9 ? 1 ;VCPNIIKRSAWEARETHCPKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFCDIGYHFLVGQDGGVYEGV GWHIQGSHTYGFNDIALGIAFIGYFVEKPPNAAALEAAQDLIQCAVVEGYLTPNYLLMGHSDVVNILSPGQALYNIISTW PHFKH ; 177 2 PDB 1TWQ 1TWQ ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1TWQ A 1 ? 165 ? Q96LB9 177 ? 341 ? 177 341 2 2 1TWQ P 1 ? 4 ? 1TWQ 996 ? 999 ? 996 999 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'it is a monomer and there is only one molecule in the asymmetric unit' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 7 ? GLU A 12 ? LYS A 183 GLU A 188 5 ? 6 HELX_P HELX_P2 2 VAL A 40 ? THR A 58 ? VAL A 216 THR A 234 1 ? 19 HELX_P HELX_P3 3 ASN A 111 ? GLU A 128 ? ASN A 287 GLU A 304 1 ? 18 HELX_P HELX_P4 4 HIS A 140 ? VAL A 144 ? HIS A 316 VAL A 320 1 ? 5 HELX_P HELX_P5 5 GLY A 150 ? SER A 158 ? GLY A 326 SER A 334 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 A CYS 124 SG ? ? A CYS 178 A CYS 300 1_555 ? ? ? ? ? ? ? 2.022 ? ? disulf2 disulf ? ? A CYS 18 SG ? ? ? 1_555 A CYS 62 SG ? ? A CYS 194 A CYS 238 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf3 disulf ? ? A CYS 38 SG ? ? ? 1_555 A CYS 44 SG ? ? A CYS 214 A CYS 220 1_555 ? ? ? ? ? ? ? 2.033 ? ? covale1 covale both ? B ALA 1 C ? ? ? 1_555 B GMA 2 N ? ? P ALA 996 P GMA 997 1_555 ? ? ? ? ? ? ? 1.355 ? ? covale2 covale one ? B ALA 1 N ? ? ? 1_555 D AMU . C10 ? ? P ALA 996 P AMU 1001 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale3 covale both ? B GMA 2 C ? ? ? 1_555 B LYS 3 N ? ? P GMA 997 P LYS 998 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale4 covale both ? B LYS 3 C ? ? ? 1_555 B NH2 4 N ? ? P LYS 998 P NH2 999 1_555 ? ? ? ? ? ? ? 1.310 ? ? metalc1 metalc ? ? A VAL 1 N ? ? ? 1_555 C NI . NI ? ? A VAL 177 A NI 900 1_555 ? ? ? ? ? ? ? 2.082 ? ? metalc2 metalc ? ? A VAL 1 O ? ? ? 1_555 C NI . NI ? ? A VAL 177 A NI 900 1_555 ? ? ? ? ? ? ? 1.955 ? ? metalc3 metalc ? ? A ASP 120 OD2 ? ? ? 1_555 C NI . NI ? ? A ASP 296 A NI 900 1_555 ? ? ? ? ? ? ? 2.160 ? ? metalc4 metalc ? ? A HIS 162 NE2 ? ? ? 6_555 C NI . NI ? ? A HIS 338 A NI 900 1_555 ? ? ? ? ? ? ? 2.125 ? ? metalc5 metalc ? ? C NI . NI ? ? ? 1_555 E HOH . O ? ? A NI 900 A HOH 1007 1_555 ? ? ? ? ? ? ? 2.311 ? ? metalc6 metalc ? ? C NI . NI ? ? ? 1_555 E HOH . O ? ? A NI 900 A HOH 1020 1_555 ? ? ? ? ? ? ? 2.350 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N ? A VAL 1 ? A VAL 177 ? 1_555 NI ? C NI . ? A NI 900 ? 1_555 O ? A VAL 1 ? A VAL 177 ? 1_555 84.3 ? 2 N ? A VAL 1 ? A VAL 177 ? 1_555 NI ? C NI . ? A NI 900 ? 1_555 OD2 ? A ASP 120 ? A ASP 296 ? 1_555 157.1 ? 3 O ? A VAL 1 ? A VAL 177 ? 1_555 NI ? C NI . ? A NI 900 ? 1_555 OD2 ? A ASP 120 ? A ASP 296 ? 1_555 80.6 ? 4 N ? A VAL 1 ? A VAL 177 ? 1_555 NI ? C NI . ? A NI 900 ? 1_555 NE2 ? A HIS 162 ? A HIS 338 ? 6_555 93.9 ? 5 O ? A VAL 1 ? A VAL 177 ? 1_555 NI ? C NI . ? A NI 900 ? 1_555 NE2 ? A HIS 162 ? A HIS 338 ? 6_555 177.9 ? 6 OD2 ? A ASP 120 ? A ASP 296 ? 1_555 NI ? C NI . ? A NI 900 ? 1_555 NE2 ? A HIS 162 ? A HIS 338 ? 6_555 100.8 ? 7 N ? A VAL 1 ? A VAL 177 ? 1_555 NI ? C NI . ? A NI 900 ? 1_555 O ? E HOH . ? A HOH 1007 ? 1_555 105.1 ? 8 O ? A VAL 1 ? A VAL 177 ? 1_555 NI ? C NI . ? A NI 900 ? 1_555 O ? E HOH . ? A HOH 1007 ? 1_555 94.5 ? 9 OD2 ? A ASP 120 ? A ASP 296 ? 1_555 NI ? C NI . ? A NI 900 ? 1_555 O ? E HOH . ? A HOH 1007 ? 1_555 93.2 ? 10 NE2 ? A HIS 162 ? A HIS 338 ? 6_555 NI ? C NI . ? A NI 900 ? 1_555 O ? E HOH . ? A HOH 1007 ? 1_555 87.0 ? 11 N ? A VAL 1 ? A VAL 177 ? 1_555 NI ? C NI . ? A NI 900 ? 1_555 O ? E HOH . ? A HOH 1020 ? 1_555 86.3 ? 12 O ? A VAL 1 ? A VAL 177 ? 1_555 NI ? C NI . ? A NI 900 ? 1_555 O ? E HOH . ? A HOH 1020 ? 1_555 87.4 ? 13 OD2 ? A ASP 120 ? A ASP 296 ? 1_555 NI ? C NI . ? A NI 900 ? 1_555 O ? E HOH . ? A HOH 1020 ? 1_555 76.0 ? 14 NE2 ? A HIS 162 ? A HIS 338 ? 6_555 NI ? C NI . ? A NI 900 ? 1_555 O ? E HOH . ? A HOH 1020 ? 1_555 91.4 ? 15 O ? E HOH . ? A HOH 1007 ? 1_555 NI ? C NI . ? A NI 900 ? 1_555 O ? E HOH . ? A HOH 1020 ? 1_555 168.6 ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LEU 23 A . ? LEU 199 A PRO 24 A ? PRO 200 A 1 0.14 2 SER 148 A . ? SER 324 A PRO 149 A ? PRO 325 A 1 0.53 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 76 ? GLU A 78 ? VAL A 252 GLU A 254 A 2 PHE A 68 ? VAL A 70 ? PHE A 244 VAL A 246 A 3 ALA A 96 ? PHE A 101 ? ALA A 272 PHE A 277 A 4 ALA A 25 ? HIS A 32 ? ALA A 201 HIS A 208 A 5 LEU A 131 ? GLY A 139 ? LEU A 307 GLY A 315 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 77 ? O TYR A 253 N LEU A 69 ? N LEU A 245 A 2 3 N PHE A 68 ? N PHE A 244 O ALA A 100 ? O ALA A 276 A 3 4 O PHE A 101 ? O PHE A 277 N ILE A 31 ? N ILE A 207 A 4 5 N ALA A 25 ? N ALA A 201 O THR A 132 ? O THR A 308 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 P _pdbx_validate_rmsd_angle.auth_comp_id_1 GMA _pdbx_validate_rmsd_angle.auth_seq_id_1 997 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 C _pdbx_validate_rmsd_angle.auth_asym_id_2 P _pdbx_validate_rmsd_angle.auth_comp_id_2 GMA _pdbx_validate_rmsd_angle.auth_seq_id_2 997 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N _pdbx_validate_rmsd_angle.auth_asym_id_3 P _pdbx_validate_rmsd_angle.auth_comp_id_3 LYS _pdbx_validate_rmsd_angle.auth_seq_id_3 998 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 136.00 _pdbx_validate_rmsd_angle.angle_target_value 117.20 _pdbx_validate_rmsd_angle.angle_deviation 18.80 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.20 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 181 ? ? 74.27 98.26 2 1 SER A 263 ? ? -140.30 56.40 3 1 LYS A 340 ? ? -67.41 76.22 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 CA ? P GMA 997 ? 'WRONG HAND' . 2 1 C1 ? P AMU 1001 ? 'WRONG HAND' . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id GMA _pdbx_struct_mod_residue.label_seq_id 2 _pdbx_struct_mod_residue.auth_asym_id P _pdbx_struct_mod_residue.auth_comp_id GMA _pdbx_struct_mod_residue.auth_seq_id 997 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id GLU _pdbx_struct_mod_residue.details '4-AMIDO-4-CARBAMOYL-BUTYRIC ACID' # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 1016 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 AMU C1 C N R 14 AMU C2 C N R 15 AMU C3 C N R 16 AMU C4 C N S 17 AMU C5 C N R 18 AMU C6 C N N 19 AMU C7 C N N 20 AMU C8 C N N 21 AMU C9 C N R 22 AMU C10 C N N 23 AMU C11 C N N 24 AMU O1 O N N 25 AMU O3 O N N 26 AMU O4 O N N 27 AMU O5 O N N 28 AMU O6 O N N 29 AMU O7 O N N 30 AMU O10 O N N 31 AMU O11 O N N 32 AMU N2 N N N 33 AMU H1 H N N 34 AMU H2 H N N 35 AMU H3 H N N 36 AMU H4 H N N 37 AMU H5 H N N 38 AMU H61 H N N 39 AMU H62 H N N 40 AMU H81 H N N 41 AMU H82 H N N 42 AMU H83 H N N 43 AMU H9 H N N 44 AMU H111 H N N 45 AMU H112 H N N 46 AMU H113 H N N 47 AMU HO1 H N N 48 AMU HO4 H N N 49 AMU HO6 H N N 50 AMU HO11 H N N 51 AMU HN2 H N N 52 ARG N N N N 53 ARG CA C N S 54 ARG C C N N 55 ARG O O N N 56 ARG CB C N N 57 ARG CG C N N 58 ARG CD C N N 59 ARG NE N N N 60 ARG CZ C N N 61 ARG NH1 N N N 62 ARG NH2 N N N 63 ARG OXT O N N 64 ARG H H N N 65 ARG H2 H N N 66 ARG HA H N N 67 ARG HB2 H N N 68 ARG HB3 H N N 69 ARG HG2 H N N 70 ARG HG3 H N N 71 ARG HD2 H N N 72 ARG HD3 H N N 73 ARG HE H N N 74 ARG HH11 H N N 75 ARG HH12 H N N 76 ARG HH21 H N N 77 ARG HH22 H N N 78 ARG HXT H N N 79 ASN N N N N 80 ASN CA C N S 81 ASN C C N N 82 ASN O O N N 83 ASN CB C N N 84 ASN CG C N N 85 ASN OD1 O N N 86 ASN ND2 N N N 87 ASN OXT O N N 88 ASN H H N N 89 ASN H2 H N N 90 ASN HA H N N 91 ASN HB2 H N N 92 ASN HB3 H N N 93 ASN HD21 H N N 94 ASN HD22 H N N 95 ASN HXT H N N 96 ASP N N N N 97 ASP CA C N S 98 ASP C C N N 99 ASP O O N N 100 ASP CB C N N 101 ASP CG C N N 102 ASP OD1 O N N 103 ASP OD2 O N N 104 ASP OXT O N N 105 ASP H H N N 106 ASP H2 H N N 107 ASP HA H N N 108 ASP HB2 H N N 109 ASP HB3 H N N 110 ASP HD2 H N N 111 ASP HXT H N N 112 CYS N N N N 113 CYS CA C N R 114 CYS C C N N 115 CYS O O N N 116 CYS CB C N N 117 CYS SG S N N 118 CYS OXT O N N 119 CYS H H N N 120 CYS H2 H N N 121 CYS HA H N N 122 CYS HB2 H N N 123 CYS HB3 H N N 124 CYS HG H N N 125 CYS HXT H N N 126 GLN N N N N 127 GLN CA C N S 128 GLN C C N N 129 GLN O O N N 130 GLN CB C N N 131 GLN CG C N N 132 GLN CD C N N 133 GLN OE1 O N N 134 GLN NE2 N N N 135 GLN OXT O N N 136 GLN H H N N 137 GLN H2 H N N 138 GLN HA H N N 139 GLN HB2 H N N 140 GLN HB3 H N N 141 GLN HG2 H N N 142 GLN HG3 H N N 143 GLN HE21 H N N 144 GLN HE22 H N N 145 GLN HXT H N N 146 GLU N N N N 147 GLU CA C N S 148 GLU C C N N 149 GLU O O N N 150 GLU CB C N N 151 GLU CG C N N 152 GLU CD C N N 153 GLU OE1 O N N 154 GLU OE2 O N N 155 GLU OXT O N N 156 GLU H H N N 157 GLU H2 H N N 158 GLU HA H N N 159 GLU HB2 H N N 160 GLU HB3 H N N 161 GLU HG2 H N N 162 GLU HG3 H N N 163 GLU HE2 H N N 164 GLU HXT H N N 165 GLY N N N N 166 GLY CA C N N 167 GLY C C N N 168 GLY O O N N 169 GLY OXT O N N 170 GLY H H N N 171 GLY H2 H N N 172 GLY HA2 H N N 173 GLY HA3 H N N 174 GLY HXT H N N 175 GMA N N N N 176 GMA CA C N S 177 GMA CD C N N 178 GMA O1 O N N 179 GMA CB C N N 180 GMA CG C N N 181 GMA C C N N 182 GMA O O N N 183 GMA OXT O N N 184 GMA N2 N N N 185 GMA H H N N 186 GMA H2 H N N 187 GMA HA H N N 188 GMA HB2 H N N 189 GMA HB3 H N N 190 GMA HG2 H N N 191 GMA HG3 H N N 192 GMA HXT H N N 193 GMA HN2A H N N 194 GMA HN1 H N N 195 HIS N N N N 196 HIS CA C N S 197 HIS C C N N 198 HIS O O N N 199 HIS CB C N N 200 HIS CG C Y N 201 HIS ND1 N Y N 202 HIS CD2 C Y N 203 HIS CE1 C Y N 204 HIS NE2 N Y N 205 HIS OXT O N N 206 HIS H H N N 207 HIS H2 H N N 208 HIS HA H N N 209 HIS HB2 H N N 210 HIS HB3 H N N 211 HIS HD1 H N N 212 HIS HD2 H N N 213 HIS HE1 H N N 214 HIS HE2 H N N 215 HIS HXT H N N 216 HOH O O N N 217 HOH H1 H N N 218 HOH H2 H N N 219 ILE N N N N 220 ILE CA C N S 221 ILE C C N N 222 ILE O O N N 223 ILE CB C N S 224 ILE CG1 C N N 225 ILE CG2 C N N 226 ILE CD1 C N N 227 ILE OXT O N N 228 ILE H H N N 229 ILE H2 H N N 230 ILE HA H N N 231 ILE HB H N N 232 ILE HG12 H N N 233 ILE HG13 H N N 234 ILE HG21 H N N 235 ILE HG22 H N N 236 ILE HG23 H N N 237 ILE HD11 H N N 238 ILE HD12 H N N 239 ILE HD13 H N N 240 ILE HXT H N N 241 LEU N N N N 242 LEU CA C N S 243 LEU C C N N 244 LEU O O N N 245 LEU CB C N N 246 LEU CG C N N 247 LEU CD1 C N N 248 LEU CD2 C N N 249 LEU OXT O N N 250 LEU H H N N 251 LEU H2 H N N 252 LEU HA H N N 253 LEU HB2 H N N 254 LEU HB3 H N N 255 LEU HG H N N 256 LEU HD11 H N N 257 LEU HD12 H N N 258 LEU HD13 H N N 259 LEU HD21 H N N 260 LEU HD22 H N N 261 LEU HD23 H N N 262 LEU HXT H N N 263 LYS N N N N 264 LYS CA C N S 265 LYS C C N N 266 LYS O O N N 267 LYS CB C N N 268 LYS CG C N N 269 LYS CD C N N 270 LYS CE C N N 271 LYS NZ N N N 272 LYS OXT O N N 273 LYS H H N N 274 LYS H2 H N N 275 LYS HA H N N 276 LYS HB2 H N N 277 LYS HB3 H N N 278 LYS HG2 H N N 279 LYS HG3 H N N 280 LYS HD2 H N N 281 LYS HD3 H N N 282 LYS HE2 H N N 283 LYS HE3 H N N 284 LYS HZ1 H N N 285 LYS HZ2 H N N 286 LYS HZ3 H N N 287 LYS HXT H N N 288 MET N N N N 289 MET CA C N S 290 MET C C N N 291 MET O O N N 292 MET CB C N N 293 MET CG C N N 294 MET SD S N N 295 MET CE C N N 296 MET OXT O N N 297 MET H H N N 298 MET H2 H N N 299 MET HA H N N 300 MET HB2 H N N 301 MET HB3 H N N 302 MET HG2 H N N 303 MET HG3 H N N 304 MET HE1 H N N 305 MET HE2 H N N 306 MET HE3 H N N 307 MET HXT H N N 308 NH2 N N N N 309 NH2 HN1 H N N 310 NH2 HN2 H N N 311 NI NI NI N N 312 PHE N N N N 313 PHE CA C N S 314 PHE C C N N 315 PHE O O N N 316 PHE CB C N N 317 PHE CG C Y N 318 PHE CD1 C Y N 319 PHE CD2 C Y N 320 PHE CE1 C Y N 321 PHE CE2 C Y N 322 PHE CZ C Y N 323 PHE OXT O N N 324 PHE H H N N 325 PHE H2 H N N 326 PHE HA H N N 327 PHE HB2 H N N 328 PHE HB3 H N N 329 PHE HD1 H N N 330 PHE HD2 H N N 331 PHE HE1 H N N 332 PHE HE2 H N N 333 PHE HZ H N N 334 PHE HXT H N N 335 PRO N N N N 336 PRO CA C N S 337 PRO C C N N 338 PRO O O N N 339 PRO CB C N N 340 PRO CG C N N 341 PRO CD C N N 342 PRO OXT O N N 343 PRO H H N N 344 PRO HA H N N 345 PRO HB2 H N N 346 PRO HB3 H N N 347 PRO HG2 H N N 348 PRO HG3 H N N 349 PRO HD2 H N N 350 PRO HD3 H N N 351 PRO HXT H N N 352 SER N N N N 353 SER CA C N S 354 SER C C N N 355 SER O O N N 356 SER CB C N N 357 SER OG O N N 358 SER OXT O N N 359 SER H H N N 360 SER H2 H N N 361 SER HA H N N 362 SER HB2 H N N 363 SER HB3 H N N 364 SER HG H N N 365 SER HXT H N N 366 THR N N N N 367 THR CA C N S 368 THR C C N N 369 THR O O N N 370 THR CB C N R 371 THR OG1 O N N 372 THR CG2 C N N 373 THR OXT O N N 374 THR H H N N 375 THR H2 H N N 376 THR HA H N N 377 THR HB H N N 378 THR HG1 H N N 379 THR HG21 H N N 380 THR HG22 H N N 381 THR HG23 H N N 382 THR HXT H N N 383 TRP N N N N 384 TRP CA C N S 385 TRP C C N N 386 TRP O O N N 387 TRP CB C N N 388 TRP CG C Y N 389 TRP CD1 C Y N 390 TRP CD2 C Y N 391 TRP NE1 N Y N 392 TRP CE2 C Y N 393 TRP CE3 C Y N 394 TRP CZ2 C Y N 395 TRP CZ3 C Y N 396 TRP CH2 C Y N 397 TRP OXT O N N 398 TRP H H N N 399 TRP H2 H N N 400 TRP HA H N N 401 TRP HB2 H N N 402 TRP HB3 H N N 403 TRP HD1 H N N 404 TRP HE1 H N N 405 TRP HE3 H N N 406 TRP HZ2 H N N 407 TRP HZ3 H N N 408 TRP HH2 H N N 409 TRP HXT H N N 410 TYR N N N N 411 TYR CA C N S 412 TYR C C N N 413 TYR O O N N 414 TYR CB C N N 415 TYR CG C Y N 416 TYR CD1 C Y N 417 TYR CD2 C Y N 418 TYR CE1 C Y N 419 TYR CE2 C Y N 420 TYR CZ C Y N 421 TYR OH O N N 422 TYR OXT O N N 423 TYR H H N N 424 TYR H2 H N N 425 TYR HA H N N 426 TYR HB2 H N N 427 TYR HB3 H N N 428 TYR HD1 H N N 429 TYR HD2 H N N 430 TYR HE1 H N N 431 TYR HE2 H N N 432 TYR HH H N N 433 TYR HXT H N N 434 VAL N N N N 435 VAL CA C N S 436 VAL C C N N 437 VAL O O N N 438 VAL CB C N N 439 VAL CG1 C N N 440 VAL CG2 C N N 441 VAL OXT O N N 442 VAL H H N N 443 VAL H2 H N N 444 VAL HA H N N 445 VAL HB H N N 446 VAL HG11 H N N 447 VAL HG12 H N N 448 VAL HG13 H N N 449 VAL HG21 H N N 450 VAL HG22 H N N 451 VAL HG23 H N N 452 VAL HXT H N N 453 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 AMU C1 C2 sing N N 13 AMU C1 O1 sing N N 14 AMU C1 O5 sing N N 15 AMU C1 H1 sing N N 16 AMU C2 C3 sing N N 17 AMU C2 N2 sing N N 18 AMU C2 H2 sing N N 19 AMU C3 C4 sing N N 20 AMU C3 O3 sing N N 21 AMU C3 H3 sing N N 22 AMU C4 C5 sing N N 23 AMU C4 O4 sing N N 24 AMU C4 H4 sing N N 25 AMU C5 C6 sing N N 26 AMU C5 O5 sing N N 27 AMU C5 H5 sing N N 28 AMU C6 O6 sing N N 29 AMU C6 H61 sing N N 30 AMU C6 H62 sing N N 31 AMU C7 C8 sing N N 32 AMU C7 O7 doub N N 33 AMU C7 N2 sing N N 34 AMU C8 H81 sing N N 35 AMU C8 H82 sing N N 36 AMU C8 H83 sing N N 37 AMU C9 C10 sing N N 38 AMU C9 C11 sing N N 39 AMU C9 O3 sing N N 40 AMU C9 H9 sing N N 41 AMU C10 O10 doub N N 42 AMU C10 O11 sing N N 43 AMU C11 H111 sing N N 44 AMU C11 H112 sing N N 45 AMU C11 H113 sing N N 46 AMU O1 HO1 sing N N 47 AMU O4 HO4 sing N N 48 AMU O6 HO6 sing N N 49 AMU O11 HO11 sing N N 50 AMU N2 HN2 sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 CYS N CA sing N N 109 CYS N H sing N N 110 CYS N H2 sing N N 111 CYS CA C sing N N 112 CYS CA CB sing N N 113 CYS CA HA sing N N 114 CYS C O doub N N 115 CYS C OXT sing N N 116 CYS CB SG sing N N 117 CYS CB HB2 sing N N 118 CYS CB HB3 sing N N 119 CYS SG HG sing N N 120 CYS OXT HXT sing N N 121 GLN N CA sing N N 122 GLN N H sing N N 123 GLN N H2 sing N N 124 GLN CA C sing N N 125 GLN CA CB sing N N 126 GLN CA HA sing N N 127 GLN C O doub N N 128 GLN C OXT sing N N 129 GLN CB CG sing N N 130 GLN CB HB2 sing N N 131 GLN CB HB3 sing N N 132 GLN CG CD sing N N 133 GLN CG HG2 sing N N 134 GLN CG HG3 sing N N 135 GLN CD OE1 doub N N 136 GLN CD NE2 sing N N 137 GLN NE2 HE21 sing N N 138 GLN NE2 HE22 sing N N 139 GLN OXT HXT sing N N 140 GLU N CA sing N N 141 GLU N H sing N N 142 GLU N H2 sing N N 143 GLU CA C sing N N 144 GLU CA CB sing N N 145 GLU CA HA sing N N 146 GLU C O doub N N 147 GLU C OXT sing N N 148 GLU CB CG sing N N 149 GLU CB HB2 sing N N 150 GLU CB HB3 sing N N 151 GLU CG CD sing N N 152 GLU CG HG2 sing N N 153 GLU CG HG3 sing N N 154 GLU CD OE1 doub N N 155 GLU CD OE2 sing N N 156 GLU OE2 HE2 sing N N 157 GLU OXT HXT sing N N 158 GLY N CA sing N N 159 GLY N H sing N N 160 GLY N H2 sing N N 161 GLY CA C sing N N 162 GLY CA HA2 sing N N 163 GLY CA HA3 sing N N 164 GLY C O doub N N 165 GLY C OXT sing N N 166 GLY OXT HXT sing N N 167 GMA N CA sing N N 168 GMA N H sing N N 169 GMA N H2 sing N N 170 GMA CA CD sing N N 171 GMA CA CB sing N N 172 GMA CA HA sing N N 173 GMA CD O1 doub N N 174 GMA CD N2 sing N N 175 GMA CB CG sing N N 176 GMA CB HB2 sing N N 177 GMA CB HB3 sing N N 178 GMA CG C sing N N 179 GMA CG HG2 sing N N 180 GMA CG HG3 sing N N 181 GMA C O doub N N 182 GMA C OXT sing N N 183 GMA OXT HXT sing N N 184 GMA N2 HN2A sing N N 185 GMA N2 HN1 sing N N 186 HIS N CA sing N N 187 HIS N H sing N N 188 HIS N H2 sing N N 189 HIS CA C sing N N 190 HIS CA CB sing N N 191 HIS CA HA sing N N 192 HIS C O doub N N 193 HIS C OXT sing N N 194 HIS CB CG sing N N 195 HIS CB HB2 sing N N 196 HIS CB HB3 sing N N 197 HIS CG ND1 sing Y N 198 HIS CG CD2 doub Y N 199 HIS ND1 CE1 doub Y N 200 HIS ND1 HD1 sing N N 201 HIS CD2 NE2 sing Y N 202 HIS CD2 HD2 sing N N 203 HIS CE1 NE2 sing Y N 204 HIS CE1 HE1 sing N N 205 HIS NE2 HE2 sing N N 206 HIS OXT HXT sing N N 207 HOH O H1 sing N N 208 HOH O H2 sing N N 209 ILE N CA sing N N 210 ILE N H sing N N 211 ILE N H2 sing N N 212 ILE CA C sing N N 213 ILE CA CB sing N N 214 ILE CA HA sing N N 215 ILE C O doub N N 216 ILE C OXT sing N N 217 ILE CB CG1 sing N N 218 ILE CB CG2 sing N N 219 ILE CB HB sing N N 220 ILE CG1 CD1 sing N N 221 ILE CG1 HG12 sing N N 222 ILE CG1 HG13 sing N N 223 ILE CG2 HG21 sing N N 224 ILE CG2 HG22 sing N N 225 ILE CG2 HG23 sing N N 226 ILE CD1 HD11 sing N N 227 ILE CD1 HD12 sing N N 228 ILE CD1 HD13 sing N N 229 ILE OXT HXT sing N N 230 LEU N CA sing N N 231 LEU N H sing N N 232 LEU N H2 sing N N 233 LEU CA C sing N N 234 LEU CA CB sing N N 235 LEU CA HA sing N N 236 LEU C O doub N N 237 LEU C OXT sing N N 238 LEU CB CG sing N N 239 LEU CB HB2 sing N N 240 LEU CB HB3 sing N N 241 LEU CG CD1 sing N N 242 LEU CG CD2 sing N N 243 LEU CG HG sing N N 244 LEU CD1 HD11 sing N N 245 LEU CD1 HD12 sing N N 246 LEU CD1 HD13 sing N N 247 LEU CD2 HD21 sing N N 248 LEU CD2 HD22 sing N N 249 LEU CD2 HD23 sing N N 250 LEU OXT HXT sing N N 251 LYS N CA sing N N 252 LYS N H sing N N 253 LYS N H2 sing N N 254 LYS CA C sing N N 255 LYS CA CB sing N N 256 LYS CA HA sing N N 257 LYS C O doub N N 258 LYS C OXT sing N N 259 LYS CB CG sing N N 260 LYS CB HB2 sing N N 261 LYS CB HB3 sing N N 262 LYS CG CD sing N N 263 LYS CG HG2 sing N N 264 LYS CG HG3 sing N N 265 LYS CD CE sing N N 266 LYS CD HD2 sing N N 267 LYS CD HD3 sing N N 268 LYS CE NZ sing N N 269 LYS CE HE2 sing N N 270 LYS CE HE3 sing N N 271 LYS NZ HZ1 sing N N 272 LYS NZ HZ2 sing N N 273 LYS NZ HZ3 sing N N 274 LYS OXT HXT sing N N 275 MET N CA sing N N 276 MET N H sing N N 277 MET N H2 sing N N 278 MET CA C sing N N 279 MET CA CB sing N N 280 MET CA HA sing N N 281 MET C O doub N N 282 MET C OXT sing N N 283 MET CB CG sing N N 284 MET CB HB2 sing N N 285 MET CB HB3 sing N N 286 MET CG SD sing N N 287 MET CG HG2 sing N N 288 MET CG HG3 sing N N 289 MET SD CE sing N N 290 MET CE HE1 sing N N 291 MET CE HE2 sing N N 292 MET CE HE3 sing N N 293 MET OXT HXT sing N N 294 NH2 N HN1 sing N N 295 NH2 N HN2 sing N N 296 PHE N CA sing N N 297 PHE N H sing N N 298 PHE N H2 sing N N 299 PHE CA C sing N N 300 PHE CA CB sing N N 301 PHE CA HA sing N N 302 PHE C O doub N N 303 PHE C OXT sing N N 304 PHE CB CG sing N N 305 PHE CB HB2 sing N N 306 PHE CB HB3 sing N N 307 PHE CG CD1 doub Y N 308 PHE CG CD2 sing Y N 309 PHE CD1 CE1 sing Y N 310 PHE CD1 HD1 sing N N 311 PHE CD2 CE2 doub Y N 312 PHE CD2 HD2 sing N N 313 PHE CE1 CZ doub Y N 314 PHE CE1 HE1 sing N N 315 PHE CE2 CZ sing Y N 316 PHE CE2 HE2 sing N N 317 PHE CZ HZ sing N N 318 PHE OXT HXT sing N N 319 PRO N CA sing N N 320 PRO N CD sing N N 321 PRO N H sing N N 322 PRO CA C sing N N 323 PRO CA CB sing N N 324 PRO CA HA sing N N 325 PRO C O doub N N 326 PRO C OXT sing N N 327 PRO CB CG sing N N 328 PRO CB HB2 sing N N 329 PRO CB HB3 sing N N 330 PRO CG CD sing N N 331 PRO CG HG2 sing N N 332 PRO CG HG3 sing N N 333 PRO CD HD2 sing N N 334 PRO CD HD3 sing N N 335 PRO OXT HXT sing N N 336 SER N CA sing N N 337 SER N H sing N N 338 SER N H2 sing N N 339 SER CA C sing N N 340 SER CA CB sing N N 341 SER CA HA sing N N 342 SER C O doub N N 343 SER C OXT sing N N 344 SER CB OG sing N N 345 SER CB HB2 sing N N 346 SER CB HB3 sing N N 347 SER OG HG sing N N 348 SER OXT HXT sing N N 349 THR N CA sing N N 350 THR N H sing N N 351 THR N H2 sing N N 352 THR CA C sing N N 353 THR CA CB sing N N 354 THR CA HA sing N N 355 THR C O doub N N 356 THR C OXT sing N N 357 THR CB OG1 sing N N 358 THR CB CG2 sing N N 359 THR CB HB sing N N 360 THR OG1 HG1 sing N N 361 THR CG2 HG21 sing N N 362 THR CG2 HG22 sing N N 363 THR CG2 HG23 sing N N 364 THR OXT HXT sing N N 365 TRP N CA sing N N 366 TRP N H sing N N 367 TRP N H2 sing N N 368 TRP CA C sing N N 369 TRP CA CB sing N N 370 TRP CA HA sing N N 371 TRP C O doub N N 372 TRP C OXT sing N N 373 TRP CB CG sing N N 374 TRP CB HB2 sing N N 375 TRP CB HB3 sing N N 376 TRP CG CD1 doub Y N 377 TRP CG CD2 sing Y N 378 TRP CD1 NE1 sing Y N 379 TRP CD1 HD1 sing N N 380 TRP CD2 CE2 doub Y N 381 TRP CD2 CE3 sing Y N 382 TRP NE1 CE2 sing Y N 383 TRP NE1 HE1 sing N N 384 TRP CE2 CZ2 sing Y N 385 TRP CE3 CZ3 doub Y N 386 TRP CE3 HE3 sing N N 387 TRP CZ2 CH2 doub Y N 388 TRP CZ2 HZ2 sing N N 389 TRP CZ3 CH2 sing Y N 390 TRP CZ3 HZ3 sing N N 391 TRP CH2 HH2 sing N N 392 TRP OXT HXT sing N N 393 TYR N CA sing N N 394 TYR N H sing N N 395 TYR N H2 sing N N 396 TYR CA C sing N N 397 TYR CA CB sing N N 398 TYR CA HA sing N N 399 TYR C O doub N N 400 TYR C OXT sing N N 401 TYR CB CG sing N N 402 TYR CB HB2 sing N N 403 TYR CB HB3 sing N N 404 TYR CG CD1 doub Y N 405 TYR CG CD2 sing Y N 406 TYR CD1 CE1 sing Y N 407 TYR CD1 HD1 sing N N 408 TYR CD2 CE2 doub Y N 409 TYR CD2 HD2 sing N N 410 TYR CE1 CZ doub Y N 411 TYR CE1 HE1 sing N N 412 TYR CE2 CZ sing Y N 413 TYR CE2 HE2 sing N N 414 TYR CZ OH sing N N 415 TYR OH HH sing N N 416 TYR OXT HXT sing N N 417 VAL N CA sing N N 418 VAL N H sing N N 419 VAL N H2 sing N N 420 VAL CA C sing N N 421 VAL CA CB sing N N 422 VAL CA HA sing N N 423 VAL C O doub N N 424 VAL C OXT sing N N 425 VAL CB CG1 sing N N 426 VAL CB CG2 sing N N 427 VAL CB HB sing N N 428 VAL CG1 HG11 sing N N 429 VAL CG1 HG12 sing N N 430 VAL CG1 HG13 sing N N 431 VAL CG2 HG21 sing N N 432 VAL CG2 HG22 sing N N 433 VAL CG2 HG23 sing N N 434 VAL OXT HXT sing N N 435 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1SK3 _pdbx_initial_refinement_model.details 'PDB entry 1SK3' # _atom_sites.entry_id 1TWQ _atom_sites.fract_transf_matrix[1][1] 0.009568 _atom_sites.fract_transf_matrix[1][2] 0.005524 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011049 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023781 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NI O S # loop_