HEADER TRANSLATION 20-JUL-04 1U2R TITLE CRYSTAL STRUCTURE OF ADP-RIBOSYLATED RIBOSOMAL TRANSLOCASE FROM TITLE 2 SACCHAROMYCES CEREVISIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ELONGATION FACTOR 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EF-2, ADPR-EF2 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932 KEYWDS ADP-RIBOSYLATION, EUKARYOTIC ELONGATION FACTOR 2, DIPHTHAMIDE, GDP, KEYWDS 2 SORDARIN, TRANSLATION EXPDTA X-RAY DIFFRACTION AUTHOR R.JORGENSEN,S.P.YATES,J.NILSSON,G.A.PRENTICE,D.J.TEAL,A.R.MERRILL, AUTHOR 2 G.R.ANDERSEN REVDAT 4 25-OCT-23 1U2R 1 REMARK SEQADV LINK REVDAT 3 24-FEB-09 1U2R 1 VERSN REVDAT 2 02-NOV-04 1U2R 1 JRNL REVDAT 1 14-SEP-04 1U2R 0 JRNL AUTH R.JORGENSEN,S.P.YATES,D.J.TEAL,J.NILSSON,G.A.PRENTICE, JRNL AUTH 2 A.R.MERRILL,G.R.ANDERSEN JRNL TITL CRYSTAL STRUCTURE OF ADP-RIBOSYLATED RIBOSOMAL TRANSLOCASE JRNL TITL 2 FROM SACCHAROMYCES CEREVISIAE JRNL REF J.BIOL.CHEM. V. 279 45919 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 15316019 JRNL DOI 10.1074/JBC.M406218200 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 36965 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1126 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 2 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.64 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3270 REMARK 3 BIN FREE R VALUE : 0.3770 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 58 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6386 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 99 REMARK 3 SOLVENT ATOMS : 185 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 62.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.334 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1U2R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-JUL-04. REMARK 100 THE DEPOSITION ID IS D_1000023171. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAY-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I711 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.089 REMARK 200 MONOCHROMATOR : SINGLE SI(111) CRYSTAL REMARK 200 OPTICS : MIRROR, MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36997 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : 0.05600 REMARK 200 FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.25700 REMARK 200 R SYM FOR SHELL (I) : 0.25700 REMARK 200 FOR SHELL : 4.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1N0U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG-8000, ETHYLENE GLYCOL, HEPES-NAOH, REMARK 280 MAGNESIUM CHLORIDE, DTT, PH 7.2, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 59.86250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 75.50100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 59.86250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 75.50100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 ALA A 49 REMARK 465 LYS A 50 REMARK 465 ALA A 51 REMARK 465 GLY A 52 REMARK 465 GLU A 53 REMARK 465 ALA A 54 REMARK 465 ARG A 55 REMARK 465 PHE A 56 REMARK 465 THR A 57 REMARK 465 ASP A 58 REMARK 465 THR A 59 REMARK 465 ARG A 60 REMARK 465 LYS A 61 REMARK 465 ASP A 62 REMARK 465 GLU A 63 REMARK 465 GLN A 64 REMARK 465 GLU A 65 REMARK 465 ARG A 66 REMARK 465 ARG A 760 REMARK 465 PRO A 761 REMARK 465 GLY A 762 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 29 -1.29 72.75 REMARK 500 LYS A 90 41.97 -77.14 REMARK 500 GLN A 168 18.26 53.74 REMARK 500 VAL A 169 153.05 -45.84 REMARK 500 LYS A 231 4.69 -64.02 REMARK 500 LYS A 293 -8.95 -54.87 REMARK 500 LYS A 391 80.07 20.93 REMARK 500 ASP A 425 -5.23 54.99 REMARK 500 LYS A 465 -142.31 87.81 REMARK 500 LYS A 479 109.11 -21.38 REMARK 500 ALA A 498 -45.67 -26.93 REMARK 500 ASP A 548 -79.16 -101.91 REMARK 500 LYS A 582 5.00 80.33 REMARK 500 TYR A 655 42.59 -101.71 REMARK 500 PHE A 677 24.47 -161.06 REMARK 500 ASP A 721 71.61 53.23 REMARK 500 GLN A 738 -16.48 -48.03 REMARK 500 GLU A 758 -165.45 -107.42 REMARK 500 PRO A 764 -139.57 -55.48 REMARK 500 LEU A 765 -159.98 -90.52 REMARK 500 PRO A 811 -16.62 -46.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 843 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 33 OG REMARK 620 2 GDP A1920 O2B 146.3 REMARK 620 3 GDP A1920 O3B 88.1 69.5 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 843 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE APR A 1699 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO1 A 1700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 1920 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1N0V RELATED DB: PDB REMARK 900 ELONGATION FACTOR 2 FROM YEAST REMARK 900 RELATED ID: 1N0U RELATED DB: PDB REMARK 900 ELONGATION FACTOR 2 FROM YEAST IN COMPLEX WITH SORDARIN DBREF 1U2R A 1 842 UNP P32324 EF2_YEAST 1 842 SEQADV 1U2R DDE A 699 UNP P32324 HIS 699 MODIFIED RESIDUE SEQRES 1 A 842 MET VAL ALA PHE THR VAL ASP GLN MET ARG SER LEU MET SEQRES 2 A 842 ASP LYS VAL THR ASN VAL ARG ASN MET SER VAL ILE ALA SEQRES 3 A 842 HIS VAL ASP HIS GLY LYS SER THR LEU THR ASP SER LEU SEQRES 4 A 842 VAL GLN ARG ALA GLY ILE ILE SER ALA ALA LYS ALA GLY SEQRES 5 A 842 GLU ALA ARG PHE THR ASP THR ARG LYS ASP GLU GLN GLU SEQRES 6 A 842 ARG GLY ILE THR ILE LYS SER THR ALA ILE SER LEU TYR SEQRES 7 A 842 SER GLU MET SER ASP GLU ASP VAL LYS GLU ILE LYS GLN SEQRES 8 A 842 LYS THR ASP GLY ASN SER PHE LEU ILE ASN LEU ILE ASP SEQRES 9 A 842 SER PRO GLY HIS VAL ASP PHE SER SER GLU VAL THR ALA SEQRES 10 A 842 ALA LEU ARG VAL THR ASP GLY ALA LEU VAL VAL VAL ASP SEQRES 11 A 842 THR ILE GLU GLY VAL CYS VAL GLN THR GLU THR VAL LEU SEQRES 12 A 842 ARG GLN ALA LEU GLY GLU ARG ILE LYS PRO VAL VAL VAL SEQRES 13 A 842 ILE ASN LYS VAL ASP ARG ALA LEU LEU GLU LEU GLN VAL SEQRES 14 A 842 SER LYS GLU ASP LEU TYR GLN THR PHE ALA ARG THR VAL SEQRES 15 A 842 GLU SER VAL ASN VAL ILE VAL SER THR TYR ALA ASP GLU SEQRES 16 A 842 VAL LEU GLY ASP VAL GLN VAL TYR PRO ALA ARG GLY THR SEQRES 17 A 842 VAL ALA PHE GLY SER GLY LEU HIS GLY TRP ALA PHE THR SEQRES 18 A 842 ILE ARG GLN PHE ALA THR ARG TYR ALA LYS LYS PHE GLY SEQRES 19 A 842 VAL ASP LYS ALA LYS MET MET ASP ARG LEU TRP GLY ASP SEQRES 20 A 842 SER PHE PHE ASN PRO LYS THR LYS LYS TRP THR ASN LYS SEQRES 21 A 842 ASP THR ASP ALA GLU GLY LYS PRO LEU GLU ARG ALA PHE SEQRES 22 A 842 ASN MET PHE ILE LEU ASP PRO ILE PHE ARG LEU PHE THR SEQRES 23 A 842 ALA ILE MET ASN PHE LYS LYS ASP GLU ILE PRO VAL LEU SEQRES 24 A 842 LEU GLU LYS LEU GLU ILE VAL LEU LYS GLY ASP GLU LYS SEQRES 25 A 842 ASP LEU GLU GLY LYS ALA LEU LEU LYS VAL VAL MET ARG SEQRES 26 A 842 LYS PHE LEU PRO ALA ALA ASP ALA LEU LEU GLU MET ILE SEQRES 27 A 842 VAL LEU HIS LEU PRO SER PRO VAL THR ALA GLN ALA TYR SEQRES 28 A 842 ARG ALA GLU GLN LEU TYR GLU GLY PRO ALA ASP ASP ALA SEQRES 29 A 842 ASN CYS ILE ALA ILE LYS ASN CYS ASP PRO LYS ALA ASP SEQRES 30 A 842 LEU MET LEU TYR VAL SER LYS MET VAL PRO THR SER ASP SEQRES 31 A 842 LYS GLY ARG PHE TYR ALA PHE GLY ARG VAL PHE ALA GLY SEQRES 32 A 842 THR VAL LYS SER GLY GLN LYS VAL ARG ILE GLN GLY PRO SEQRES 33 A 842 ASN TYR VAL PRO GLY LYS LYS ASP ASP LEU PHE ILE LYS SEQRES 34 A 842 ALA ILE GLN ARG VAL VAL LEU MET MET GLY ARG PHE VAL SEQRES 35 A 842 GLU PRO ILE ASP ASP CYS PRO ALA GLY ASN ILE ILE GLY SEQRES 36 A 842 LEU VAL GLY ILE ASP GLN PHE LEU LEU LYS THR GLY THR SEQRES 37 A 842 LEU THR THR SER GLU THR ALA HIS ASN MET LYS VAL MET SEQRES 38 A 842 LYS PHE SER VAL SER PRO VAL VAL GLN VAL ALA VAL GLU SEQRES 39 A 842 VAL LYS ASN ALA ASN ASP LEU PRO LYS LEU VAL GLU GLY SEQRES 40 A 842 LEU LYS ARG LEU SER LYS SER ASP PRO CYS VAL LEU THR SEQRES 41 A 842 TYR MET SER GLU SER GLY GLU HIS ILE VAL ALA GLY THR SEQRES 42 A 842 GLY GLU LEU HIS LEU GLU ILE CYS LEU GLN ASP LEU GLU SEQRES 43 A 842 HIS ASP HIS ALA GLY VAL PRO LEU LYS ILE SER PRO PRO SEQRES 44 A 842 VAL VAL ALA TYR ARG GLU THR VAL GLU SER GLU SER SER SEQRES 45 A 842 GLN THR ALA LEU SER LYS SER PRO ASN LYS HIS ASN ARG SEQRES 46 A 842 ILE TYR LEU LYS ALA GLU PRO ILE ASP GLU GLU VAL SER SEQRES 47 A 842 LEU ALA ILE GLU ASN GLY ILE ILE ASN PRO ARG ASP ASP SEQRES 48 A 842 PHE LYS ALA ARG ALA ARG ILE MET ALA ASP ASP TYR GLY SEQRES 49 A 842 TRP ASP VAL THR ASP ALA ARG LYS ILE TRP CYS PHE GLY SEQRES 50 A 842 PRO ASP GLY ASN GLY PRO ASN LEU VAL ILE ASP GLN THR SEQRES 51 A 842 LYS ALA VAL GLN TYR LEU HIS GLU ILE LYS ASP SER VAL SEQRES 52 A 842 VAL ALA ALA PHE GLN TRP ALA THR LYS GLU GLY PRO ILE SEQRES 53 A 842 PHE GLY GLU GLU MET ARG SER VAL ARG VAL ASN ILE LEU SEQRES 54 A 842 ASP VAL THR LEU HIS ALA ASP ALA ILE DDE ARG GLY GLY SEQRES 55 A 842 GLY GLN ILE ILE PRO THR MET ARG ARG ALA THR TYR ALA SEQRES 56 A 842 GLY PHE LEU LEU ALA ASP PRO LYS ILE GLN GLU PRO VAL SEQRES 57 A 842 PHE LEU VAL GLU ILE GLN CYS PRO GLU GLN ALA VAL GLY SEQRES 58 A 842 GLY ILE TYR SER VAL LEU ASN LYS LYS ARG GLY GLN VAL SEQRES 59 A 842 VAL SER GLU GLU GLN ARG PRO GLY THR PRO LEU PHE THR SEQRES 60 A 842 VAL LYS ALA TYR LEU PRO VAL ASN GLU SER PHE GLY PHE SEQRES 61 A 842 THR GLY GLU LEU ARG GLN ALA THR GLY GLY GLN ALA PHE SEQRES 62 A 842 PRO GLN MET VAL PHE ASP HIS TRP SER THR LEU GLY SER SEQRES 63 A 842 ASP PRO LEU ASP PRO THR SER LYS ALA GLY GLU ILE VAL SEQRES 64 A 842 LEU ALA ALA ARG LYS ARG HIS GLY MET LYS GLU GLU VAL SEQRES 65 A 842 PRO GLY TRP GLN GLU TYR TYR ASP LYS LEU MODRES 1U2R DDE A 699 HIS HET DDE A 699 20 HET MG A 843 1 HET APR A1699 35 HET SO1 A1700 35 HET GDP A1920 28 HETNAM DDE {3-[4-(2-AMINO-2-CARBOXY-ETHYL)-1H-IMIDAZOL-2-YL]-1- HETNAM 2 DDE CARBAMOYL-PROPYL}-TRIMETHYL-AMMONIUM HETNAM MG MAGNESIUM ION HETNAM APR ADENOSINE-5-DIPHOSPHORIBOSE HETNAM SO1 [1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA., HETNAM 2 SO1 7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D- HETNAM 3 SO1 ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A- HETNAM 4 SO1 OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S- HETNAM 5 SO1 INDACENE-3A(1H)-CARBOXYLIC ACID HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETSYN DDE DIPHTHAMIDE; 2-(3-CARBOXYAMIDO-3-(TRIMETHYLAMMONIO) HETSYN 2 DDE PROPYL)HISTIDINE HETSYN SO1 SORDARIN FORMUL 1 DDE C13 H24 N5 O3 1+ FORMUL 2 MG MG 2+ FORMUL 3 APR C15 H23 N5 O14 P2 FORMUL 4 SO1 C27 H42 O8 FORMUL 5 GDP C10 H15 N5 O11 P2 FORMUL 6 HOH *185(H2 O) HELIX 1 1 THR A 5 MET A 13 1 9 HELIX 2 2 ASP A 14 THR A 17 5 4 HELIX 3 3 GLY A 31 GLY A 44 1 14 HELIX 4 4 SER A 82 ILE A 89 1 8 HELIX 5 5 SER A 112 VAL A 121 1 10 HELIX 6 6 CYS A 136 GLY A 148 1 13 HELIX 7 7 LYS A 159 GLU A 166 1 8 HELIX 8 8 SER A 170 ALA A 193 1 24 HELIX 9 9 ASP A 194 GLY A 198 5 5 HELIX 10 10 TYR A 203 GLY A 207 5 5 HELIX 11 11 ILE A 222 GLY A 234 1 13 HELIX 12 12 ASP A 236 LEU A 244 1 9 HELIX 13 13 ARG A 271 ILE A 277 1 7 HELIX 14 14 ILE A 277 ASN A 290 1 14 HELIX 15 15 GLU A 295 LEU A 303 1 9 HELIX 16 16 LYS A 308 LEU A 314 5 7 HELIX 17 17 GLU A 315 LEU A 328 1 14 HELIX 18 18 PRO A 329 LEU A 342 1 14 HELIX 19 19 SER A 344 TYR A 357 1 14 HELIX 20 20 ASP A 363 ASN A 371 1 9 HELIX 21 21 ASN A 497 ASN A 499 5 3 HELIX 22 22 ASP A 500 ASP A 515 1 16 HELIX 23 23 GLY A 534 ASP A 548 1 15 HELIX 24 24 ASP A 594 ASN A 603 1 10 HELIX 25 25 ASP A 611 ASP A 622 1 12 HELIX 26 26 ASP A 626 LYS A 632 1 7 HELIX 27 27 TYR A 655 GLU A 673 1 19 HELIX 28 28 ASP A 696 ARG A 700 5 5 HELIX 29 29 GLY A 701 LEU A 719 1 19 HELIX 30 30 PRO A 736 LYS A 750 1 15 HELIX 31 31 ASN A 775 SER A 777 5 3 HELIX 32 32 GLY A 779 THR A 788 1 10 HELIX 33 33 SER A 813 HIS A 826 1 14 HELIX 34 34 GLY A 834 TYR A 839 5 6 SHEET 1 A 7 ALA A 74 GLU A 80 0 SHEET 2 A 7 SER A 97 ILE A 103 -1 O LEU A 102 N ILE A 75 SHEET 3 A 7 VAL A 19 ALA A 26 1 N MET A 22 O ILE A 103 SHEET 4 A 7 GLY A 124 ASP A 130 1 O VAL A 128 N ILE A 25 SHEET 5 A 7 LYS A 152 ASN A 158 1 O VAL A 154 N VAL A 127 SHEET 6 A 7 VAL A 209 SER A 213 1 O ALA A 210 N ILE A 157 SHEET 7 A 7 TRP A 218 THR A 221 -1 O TRP A 218 N SER A 213 SHEET 1 B 2 PHE A 249 ASN A 251 0 SHEET 2 B 2 LYS A 256 THR A 258 -1 O THR A 258 N PHE A 249 SHEET 1 C 8 LEU A 426 ALA A 430 0 SHEET 2 C 8 LYS A 410 GLN A 414 -1 N ILE A 413 O PHE A 427 SHEET 3 C 8 GLY A 467 THR A 470 -1 O THR A 470 N ARG A 412 SHEET 4 C 8 MET A 379 PRO A 387 -1 N LEU A 380 O LEU A 469 SHEET 5 C 8 PHE A 394 ALA A 402 -1 O TYR A 395 N VAL A 386 SHEET 6 C 8 ILE A 453 VAL A 457 -1 O LEU A 456 N ALA A 396 SHEET 7 C 8 ARG A 433 MET A 438 -1 N VAL A 435 O GLY A 455 SHEET 8 C 8 PHE A 441 ILE A 445 -1 O ILE A 445 N VAL A 434 SHEET 1 D 2 THR A 404 LYS A 406 0 SHEET 2 D 2 ASP A 447 PRO A 449 -1 O CYS A 448 N VAL A 405 SHEET 1 E 4 LEU A 519 MET A 522 0 SHEET 2 E 4 HIS A 528 GLY A 532 -1 O ALA A 531 N LEU A 519 SHEET 3 E 4 VAL A 489 VAL A 495 -1 N VAL A 489 O GLY A 532 SHEET 4 E 4 LEU A 554 SER A 557 -1 O LYS A 555 N GLU A 494 SHEET 1 F 5 GLU A 680 MET A 681 0 SHEET 2 F 5 ARG A 564 VAL A 567 1 N GLU A 565 O GLU A 680 SHEET 3 F 5 PRO A 722 CYS A 735 -1 O LYS A 723 N THR A 566 SHEET 4 F 5 PHE A 766 PRO A 773 -1 O ALA A 770 N VAL A 731 SHEET 5 F 5 GLN A 753 GLU A 758 -1 N VAL A 755 O LYS A 769 SHEET 1 G 4 GLU A 680 MET A 681 0 SHEET 2 G 4 ARG A 564 VAL A 567 1 N GLU A 565 O GLU A 680 SHEET 3 G 4 PRO A 722 CYS A 735 -1 O LYS A 723 N THR A 566 SHEET 4 G 4 MET A 796 THR A 803 -1 O VAL A 797 N LEU A 730 SHEET 1 H 5 ALA A 575 LYS A 578 0 SHEET 2 H 5 ARG A 585 PRO A 592 -1 O LEU A 588 N ALA A 575 SHEET 3 H 5 VAL A 684 THR A 692 -1 O ASN A 687 N LYS A 589 SHEET 4 H 5 ASN A 644 ASP A 648 1 N ILE A 647 O VAL A 686 SHEET 5 H 5 ILE A 633 PHE A 636 -1 N TRP A 634 O VAL A 646 LINK C ILE A 698 N DDE A 699 1555 1555 1.32 LINK C DDE A 699 N ARG A 700 1555 1555 1.34 LINK NE2 DDE A 699 C1D APR A1699 1555 1555 1.36 LINK OG SER A 33 MG MG A 843 1555 1555 2.11 LINK MG MG A 843 O2B GDP A1920 1555 1555 2.30 LINK MG MG A 843 O3B GDP A1920 1555 1555 2.11 CISPEP 1 GLY A 637 PRO A 638 0 -0.28 SITE 1 AC1 2 SER A 33 GDP A1920 SITE 1 AC2 5 VAL A 306 HIS A 694 ASP A 696 ILE A 698 SITE 2 AC2 5 DDE A 699 SITE 1 AC3 16 GLN A 490 LEU A 519 TYR A 521 SER A 523 SITE 2 AC3 16 GLU A 524 VAL A 561 ALA A 562 PRO A 727 SITE 3 AC3 16 PHE A 729 MET A 796 VAL A 797 PHE A 798 SITE 4 AC3 16 TRP A 801 HOH A1921 HOH A1940 HOH A1951 SITE 1 AC4 19 HIS A 27 ASP A 29 HIS A 30 GLY A 31 SITE 2 AC4 19 LYS A 32 SER A 33 THR A 34 ASN A 158 SITE 3 AC4 19 LYS A 159 ASP A 161 ARG A 162 SER A 213 SITE 4 AC4 19 GLY A 214 LEU A 215 MG A 843 HOH A1939 SITE 5 AC4 19 HOH A1988 HOH A2031 HOH A2035 CRYST1 119.725 151.002 65.172 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008352 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006622 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015344 0.00000