data_1U4L # _entry.id 1U4L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1U4L pdb_00001u4l 10.2210/pdb1u4l/pdb RCSB RCSB023237 ? ? WWPDB D_1000023237 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-11-09 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 2 0 2020-07-29 6 'Structure model' 2 1 2023-08-23 7 'Structure model' 2 2 2024-10-30 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Atomic model' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Non-polymer description' 8 5 'Structure model' 'Structure summary' 9 6 'Structure model' 'Data collection' 10 6 'Structure model' 'Database references' 11 6 'Structure model' 'Refinement description' 12 6 'Structure model' 'Structure summary' 13 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' atom_site 3 5 'Structure model' chem_comp 4 5 'Structure model' entity 5 5 'Structure model' entity_name_com 6 5 'Structure model' pdbx_branch_scheme 7 5 'Structure model' pdbx_chem_comp_identifier 8 5 'Structure model' pdbx_entity_branch 9 5 'Structure model' pdbx_entity_branch_descriptor 10 5 'Structure model' pdbx_entity_branch_link 11 5 'Structure model' pdbx_entity_branch_list 12 5 'Structure model' pdbx_entity_nonpoly 13 5 'Structure model' pdbx_molecule_features 14 5 'Structure model' pdbx_nonpoly_scheme 15 5 'Structure model' struct_conn 16 5 'Structure model' struct_conn_type 17 5 'Structure model' struct_site 18 5 'Structure model' struct_site_gen 19 6 'Structure model' chem_comp 20 6 'Structure model' chem_comp_atom 21 6 'Structure model' chem_comp_bond 22 6 'Structure model' database_2 23 6 'Structure model' pdbx_initial_refinement_model 24 7 'Structure model' pdbx_entry_details 25 7 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 5 'Structure model' '_atom_site.B_iso_or_equiv' 4 5 'Structure model' '_atom_site.Cartn_x' 5 5 'Structure model' '_atom_site.Cartn_y' 6 5 'Structure model' '_atom_site.Cartn_z' 7 5 'Structure model' '_atom_site.auth_asym_id' 8 5 'Structure model' '_atom_site.auth_atom_id' 9 5 'Structure model' '_atom_site.auth_comp_id' 10 5 'Structure model' '_atom_site.auth_seq_id' 11 5 'Structure model' '_atom_site.label_atom_id' 12 5 'Structure model' '_atom_site.label_comp_id' 13 5 'Structure model' '_atom_site.type_symbol' 14 5 'Structure model' '_chem_comp.formula' 15 5 'Structure model' '_chem_comp.formula_weight' 16 5 'Structure model' '_chem_comp.id' 17 5 'Structure model' '_chem_comp.mon_nstd_flag' 18 5 'Structure model' '_chem_comp.name' 19 5 'Structure model' '_chem_comp.type' 20 5 'Structure model' '_entity.formula_weight' 21 5 'Structure model' '_entity.pdbx_description' 22 5 'Structure model' '_entity.src_method' 23 5 'Structure model' '_entity.type' 24 6 'Structure model' '_chem_comp.pdbx_synonyms' 25 6 'Structure model' '_database_2.pdbx_DOI' 26 6 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1U4L _pdbx_database_status.recvd_initial_deposition_date 2004-07-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1hrj . unspecified PDB 1rtn . unspecified PDB 1rto . unspecified PDB 1b3a . unspecified PDB 1eqt . unspecified PDB 1u4r . unspecified PDB 1u4m . unspecified PDB 1u4p . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shaw, J.P.' 1 'Johnson, Z.' 2 'Borlat, F.' 3 'Zwahlen, C.' 4 'Kungl, A.' 5 'Roulin, K.' 6 'Harrenga, A.' 7 'Wells, T.N.C.' 8 'Proudfoot, A.E.I.' 9 # _citation.id primary _citation.title 'The X-ray structure of RANTES: heparin-derived disaccharides allows the rational design of chemokine inhibitors.' _citation.journal_abbrev Structure _citation.journal_volume 12 _citation.page_first 2081 _citation.page_last 2093 _citation.year 2004 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15530372 _citation.pdbx_database_id_DOI 10.1016/j.str.2004.08.014 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shaw, J.P.' 1 ? primary 'Johnson, Z.' 2 ? primary 'Borlat, F.' 3 ? primary 'Zwahlen, C.' 4 ? primary 'Kungl, A.' 5 ? primary 'Roulin, K.' 6 ? primary 'Harrenga, A.' 7 ? primary 'Wells, T.N.' 8 ? primary 'Proudfoot, A.E.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Small inducible cytokine A5' 7862.011 2 ? ? ? ? 2 branched man '4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose' 577.470 1 ? ? ? ? 3 non-polymer syn 'ACETIC ACID' 60.052 1 ? ? ? ? 4 water nat water 18.015 159 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'CCL5, T-cell specific RANTES protein, SIS-delta, T cell-specific protein P228, TCP228' 2 'HEPARIN DISACCHARIDE I-S,' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code SPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLEMS _entity_poly.pdbx_seq_one_letter_code_can SPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLEMS _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ACETIC ACID' ACY 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 PRO n 1 3 TYR n 1 4 SER n 1 5 SER n 1 6 ASP n 1 7 THR n 1 8 THR n 1 9 PRO n 1 10 CYS n 1 11 CYS n 1 12 PHE n 1 13 ALA n 1 14 TYR n 1 15 ILE n 1 16 ALA n 1 17 ARG n 1 18 PRO n 1 19 LEU n 1 20 PRO n 1 21 ARG n 1 22 ALA n 1 23 HIS n 1 24 ILE n 1 25 LYS n 1 26 GLU n 1 27 TYR n 1 28 PHE n 1 29 TYR n 1 30 THR n 1 31 SER n 1 32 GLY n 1 33 LYS n 1 34 CYS n 1 35 SER n 1 36 ASN n 1 37 PRO n 1 38 ALA n 1 39 VAL n 1 40 VAL n 1 41 PHE n 1 42 VAL n 1 43 THR n 1 44 ARG n 1 45 LYS n 1 46 ASN n 1 47 ARG n 1 48 GLN n 1 49 VAL n 1 50 CYS n 1 51 ALA n 1 52 ASN n 1 53 PRO n 1 54 GLU n 1 55 LYS n 1 56 LYS n 1 57 TRP n 1 58 VAL n 1 59 ARG n 1 60 GLU n 1 61 TYR n 1 62 ILE n 1 63 ASN n 1 64 SER n 1 65 LEU n 1 66 GLU n 1 67 MET n 1 68 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'CCL5, SCYA5' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET32a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'WURCS=2.0/2,2,1/[a2122h-1a_1-5_2*NSO/3=O/3=O_6*OSO/3=O/3=O][a21eEA-1a_1-5_2*OSO/3=O/3=O]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0 2 2 '[][a-D-GlcpNSO36SO3]{[(4+1)][a-L-4-deoxy-IdopA2SO3]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 UAP _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 SGN _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACY non-polymer . 'ACETIC ACID' ? 'C2 H4 O2' 60.052 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SGN 'D-saccharide, alpha linking' n '2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose' ;N,O6-DISULFO-GLUCOSAMINE; 6-O-sulfo-N-sulfo-alpha-D-glucosamine; 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucose; 2-deoxy-6-O-sulfo-2-(sulfoamino)-D-glucose; 2-deoxy-6-O-sulfo-2-(sulfoamino)-glucose ; 'C6 H13 N O11 S2' 339.298 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UAP 'L-saccharide, alpha linking' . '4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enopyranuronic acid' ;4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enuronic acid; 4-deoxy-2-O-sulfo-L-threo-hex-4-enuronic acid; 4-deoxy-2-O-sulfo-threo-hex-4-enuronic acid ; 'C6 H8 O9 S' 256.187 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SGN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 'DGlcpNS[6S]a' SGN 'COMMON NAME' GMML 1.0 N-sulfo-6-sulfo-a-D-glucopyranose SGN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GlcpNSO36SO3 UAP 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-4-deoxy-GlcpA2SO3 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 ? ? ? A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 TYR 3 3 3 TYR TYR A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 CYS 10 10 10 CYS CYS A . n A 1 11 CYS 11 11 11 CYS CYS A . n A 1 12 PHE 12 12 12 PHE PHE A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 TYR 14 14 14 TYR TYR A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 ARG 17 17 17 ARG ALA A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 HIS 23 23 23 HIS HIS A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 TYR 27 27 27 TYR TYR A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 TYR 29 29 29 TYR TYR A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 CYS 34 34 34 CYS CYS A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 PHE 41 41 41 PHE PHE A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 ARG 44 44 44 ARG ARG A . n A 1 45 LYS 45 45 45 LYS ALA A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 ARG 47 47 47 ARG ARG A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 CYS 50 50 50 CYS CYS A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 GLU 54 54 54 GLU ALA A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 TRP 57 57 57 TRP TRP A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 ARG 59 59 59 ARG ALA A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 MET 67 67 67 MET MET A . n A 1 68 SER 68 68 68 SER SER A . n B 1 1 SER 1 1 ? ? ? B . n B 1 2 PRO 2 2 ? ? ? B . n B 1 3 TYR 3 3 ? ? ? B . n B 1 4 SER 4 4 4 SER SER B . n B 1 5 SER 5 5 5 SER SER B . n B 1 6 ASP 6 6 6 ASP ALA B . n B 1 7 THR 7 7 7 THR THR B . n B 1 8 THR 8 8 8 THR THR B . n B 1 9 PRO 9 9 9 PRO PRO B . n B 1 10 CYS 10 10 10 CYS CYS B . n B 1 11 CYS 11 11 11 CYS CYS B . n B 1 12 PHE 12 12 12 PHE PHE B . n B 1 13 ALA 13 13 13 ALA ALA B . n B 1 14 TYR 14 14 14 TYR TYR B . n B 1 15 ILE 15 15 15 ILE ILE B . n B 1 16 ALA 16 16 16 ALA ALA B . n B 1 17 ARG 17 17 17 ARG ALA B . n B 1 18 PRO 18 18 18 PRO PRO B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 PRO 20 20 20 PRO PRO B . n B 1 21 ARG 21 21 21 ARG ARG B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 HIS 23 23 23 HIS HIS B . n B 1 24 ILE 24 24 24 ILE ILE B . n B 1 25 LYS 25 25 25 LYS LYS B . n B 1 26 GLU 26 26 26 GLU GLU B . n B 1 27 TYR 27 27 27 TYR TYR B . n B 1 28 PHE 28 28 28 PHE PHE B . n B 1 29 TYR 29 29 29 TYR TYR B . n B 1 30 THR 30 30 30 THR THR B . n B 1 31 SER 31 31 31 SER SER B . n B 1 32 GLY 32 32 32 GLY GLY B . n B 1 33 LYS 33 33 33 LYS LYS B . n B 1 34 CYS 34 34 34 CYS CYS B . n B 1 35 SER 35 35 35 SER SER B . n B 1 36 ASN 36 36 36 ASN ASN B . n B 1 37 PRO 37 37 37 PRO PRO B . n B 1 38 ALA 38 38 38 ALA ALA B . n B 1 39 VAL 39 39 39 VAL VAL B . n B 1 40 VAL 40 40 40 VAL VAL B . n B 1 41 PHE 41 41 41 PHE PHE B . n B 1 42 VAL 42 42 42 VAL VAL B . n B 1 43 THR 43 43 43 THR THR B . n B 1 44 ARG 44 44 44 ARG ARG B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 ASN 46 46 46 ASN ASN B . n B 1 47 ARG 47 47 47 ARG ARG B . n B 1 48 GLN 48 48 48 GLN GLN B . n B 1 49 VAL 49 49 49 VAL VAL B . n B 1 50 CYS 50 50 50 CYS CYS B . n B 1 51 ALA 51 51 51 ALA ALA B . n B 1 52 ASN 52 52 52 ASN ASN B . n B 1 53 PRO 53 53 53 PRO PRO B . n B 1 54 GLU 54 54 54 GLU ALA B . n B 1 55 LYS 55 55 55 LYS ALA B . n B 1 56 LYS 56 56 56 LYS ALA B . n B 1 57 TRP 57 57 57 TRP TRP B . n B 1 58 VAL 58 58 58 VAL VAL B . n B 1 59 ARG 59 59 59 ARG ARG B . n B 1 60 GLU 60 60 60 GLU GLU B . n B 1 61 TYR 61 61 61 TYR TYR B . n B 1 62 ILE 62 62 62 ILE ILE B . n B 1 63 ASN 63 63 63 ASN ASN B . n B 1 64 SER 64 64 64 SER SER B . n B 1 65 LEU 65 65 65 LEU LEU B . n B 1 66 GLU 66 66 66 GLU GLU B . n B 1 67 MET 67 67 67 MET MET B . n B 1 68 SER 68 68 68 SER SER B . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 2 SGN 1 C SGN 1 H H1S 1 n C 2 UAP 2 C UAP 2 H H1S 1 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 ACY 1 201 1 ACY ACY B . E 4 HOH 1 302 1 HOH WAT A . E 4 HOH 2 303 2 HOH WAT A . E 4 HOH 3 304 3 HOH WAT A . E 4 HOH 4 305 5 HOH WAT A . E 4 HOH 5 306 8 HOH WAT A . E 4 HOH 6 307 9 HOH WAT A . E 4 HOH 7 308 10 HOH WAT A . E 4 HOH 8 309 13 HOH WAT A . E 4 HOH 9 310 14 HOH WAT A . E 4 HOH 10 311 17 HOH WAT A . E 4 HOH 11 312 18 HOH WAT A . E 4 HOH 12 313 21 HOH WAT A . E 4 HOH 13 314 28 HOH WAT A . E 4 HOH 14 315 29 HOH WAT A . E 4 HOH 15 316 30 HOH WAT A . E 4 HOH 16 317 34 HOH WAT A . E 4 HOH 17 318 37 HOH WAT A . E 4 HOH 18 319 41 HOH WAT A . E 4 HOH 19 320 42 HOH WAT A . E 4 HOH 20 321 43 HOH WAT A . E 4 HOH 21 322 44 HOH WAT A . E 4 HOH 22 323 45 HOH WAT A . E 4 HOH 23 324 49 HOH WAT A . E 4 HOH 24 325 50 HOH WAT A . E 4 HOH 25 326 51 HOH WAT A . E 4 HOH 26 327 52 HOH WAT A . E 4 HOH 27 328 53 HOH WAT A . E 4 HOH 28 329 54 HOH WAT A . E 4 HOH 29 330 55 HOH WAT A . E 4 HOH 30 331 60 HOH WAT A . E 4 HOH 31 332 62 HOH WAT A . E 4 HOH 32 333 63 HOH WAT A . E 4 HOH 33 334 64 HOH WAT A . E 4 HOH 34 335 66 HOH WAT A . E 4 HOH 35 336 67 HOH WAT A . E 4 HOH 36 337 72 HOH WAT A . E 4 HOH 37 338 73 HOH WAT A . E 4 HOH 38 339 75 HOH WAT A . E 4 HOH 39 340 76 HOH WAT A . E 4 HOH 40 341 79 HOH WAT A . E 4 HOH 41 342 80 HOH WAT A . E 4 HOH 42 343 82 HOH WAT A . E 4 HOH 43 344 84 HOH WAT A . E 4 HOH 44 345 86 HOH WAT A . E 4 HOH 45 346 87 HOH WAT A . E 4 HOH 46 347 89 HOH WAT A . E 4 HOH 47 348 91 HOH WAT A . E 4 HOH 48 349 93 HOH WAT A . E 4 HOH 49 350 95 HOH WAT A . E 4 HOH 50 351 96 HOH WAT A . E 4 HOH 51 352 99 HOH WAT A . E 4 HOH 52 353 103 HOH WAT A . E 4 HOH 53 354 104 HOH WAT A . E 4 HOH 54 355 105 HOH WAT A . E 4 HOH 55 356 110 HOH WAT A . E 4 HOH 56 357 111 HOH WAT A . E 4 HOH 57 358 112 HOH WAT A . E 4 HOH 58 359 113 HOH WAT A . E 4 HOH 59 360 114 HOH WAT A . E 4 HOH 60 361 115 HOH WAT A . E 4 HOH 61 362 120 HOH WAT A . E 4 HOH 62 363 123 HOH WAT A . E 4 HOH 63 364 124 HOH WAT A . E 4 HOH 64 365 126 HOH WAT A . E 4 HOH 65 366 128 HOH WAT A . E 4 HOH 66 367 129 HOH WAT A . E 4 HOH 67 368 131 HOH WAT A . E 4 HOH 68 369 132 HOH WAT A . E 4 HOH 69 370 133 HOH WAT A . E 4 HOH 70 371 135 HOH WAT A . E 4 HOH 71 372 136 HOH WAT A . E 4 HOH 72 373 137 HOH WAT A . E 4 HOH 73 374 140 HOH WAT A . E 4 HOH 74 375 143 HOH WAT A . E 4 HOH 75 376 144 HOH WAT A . E 4 HOH 76 377 145 HOH WAT A . E 4 HOH 77 378 146 HOH WAT A . E 4 HOH 78 379 147 HOH WAT A . E 4 HOH 79 380 148 HOH WAT A . E 4 HOH 80 381 149 HOH WAT A . E 4 HOH 81 382 150 HOH WAT A . E 4 HOH 82 383 151 HOH WAT A . E 4 HOH 83 384 153 HOH WAT A . E 4 HOH 84 385 156 HOH WAT A . E 4 HOH 85 386 157 HOH WAT A . E 4 HOH 86 387 158 HOH WAT A . E 4 HOH 87 388 159 HOH WAT A . E 4 HOH 88 389 160 HOH WAT A . E 4 HOH 89 390 161 HOH WAT A . F 4 HOH 1 202 4 HOH WAT B . F 4 HOH 2 203 6 HOH WAT B . F 4 HOH 3 204 7 HOH WAT B . F 4 HOH 4 205 11 HOH WAT B . F 4 HOH 5 206 12 HOH WAT B . F 4 HOH 6 207 15 HOH WAT B . F 4 HOH 7 208 16 HOH WAT B . F 4 HOH 8 209 19 HOH WAT B . F 4 HOH 9 210 20 HOH WAT B . F 4 HOH 10 211 22 HOH WAT B . F 4 HOH 11 212 23 HOH WAT B . F 4 HOH 12 213 24 HOH WAT B . F 4 HOH 13 214 25 HOH WAT B . F 4 HOH 14 215 26 HOH WAT B . F 4 HOH 15 216 27 HOH WAT B . F 4 HOH 16 217 31 HOH WAT B . F 4 HOH 17 218 32 HOH WAT B . F 4 HOH 18 219 33 HOH WAT B . F 4 HOH 19 220 35 HOH WAT B . F 4 HOH 20 221 36 HOH WAT B . F 4 HOH 21 222 38 HOH WAT B . F 4 HOH 22 223 39 HOH WAT B . F 4 HOH 23 224 40 HOH WAT B . F 4 HOH 24 225 46 HOH WAT B . F 4 HOH 25 226 47 HOH WAT B . F 4 HOH 26 227 48 HOH WAT B . F 4 HOH 27 228 56 HOH WAT B . F 4 HOH 28 229 57 HOH WAT B . F 4 HOH 29 230 58 HOH WAT B . F 4 HOH 30 231 59 HOH WAT B . F 4 HOH 31 232 61 HOH WAT B . F 4 HOH 32 233 65 HOH WAT B . F 4 HOH 33 234 68 HOH WAT B . F 4 HOH 34 235 69 HOH WAT B . F 4 HOH 35 236 70 HOH WAT B . F 4 HOH 36 237 71 HOH WAT B . F 4 HOH 37 238 74 HOH WAT B . F 4 HOH 38 239 77 HOH WAT B . F 4 HOH 39 240 78 HOH WAT B . F 4 HOH 40 241 81 HOH WAT B . F 4 HOH 41 242 83 HOH WAT B . F 4 HOH 42 243 85 HOH WAT B . F 4 HOH 43 244 88 HOH WAT B . F 4 HOH 44 245 90 HOH WAT B . F 4 HOH 45 246 94 HOH WAT B . F 4 HOH 46 247 97 HOH WAT B . F 4 HOH 47 248 98 HOH WAT B . F 4 HOH 48 249 100 HOH WAT B . F 4 HOH 49 250 101 HOH WAT B . F 4 HOH 50 251 102 HOH WAT B . F 4 HOH 51 252 106 HOH WAT B . F 4 HOH 52 253 107 HOH WAT B . F 4 HOH 53 254 108 HOH WAT B . F 4 HOH 54 255 109 HOH WAT B . F 4 HOH 55 256 116 HOH WAT B . F 4 HOH 56 257 117 HOH WAT B . F 4 HOH 57 258 118 HOH WAT B . F 4 HOH 58 259 119 HOH WAT B . F 4 HOH 59 260 121 HOH WAT B . F 4 HOH 60 261 122 HOH WAT B . F 4 HOH 61 262 125 HOH WAT B . F 4 HOH 62 263 130 HOH WAT B . F 4 HOH 63 264 134 HOH WAT B . F 4 HOH 64 265 138 HOH WAT B . F 4 HOH 65 266 139 HOH WAT B . F 4 HOH 66 267 141 HOH WAT B . F 4 HOH 67 268 142 HOH WAT B . F 4 HOH 68 269 152 HOH WAT B . F 4 HOH 69 270 154 HOH WAT B . F 4 HOH 70 271 155 HOH WAT B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 17 ? CG ? A ARG 17 CG 2 1 Y 1 A ARG 17 ? CD ? A ARG 17 CD 3 1 Y 1 A ARG 17 ? NE ? A ARG 17 NE 4 1 Y 1 A ARG 17 ? CZ ? A ARG 17 CZ 5 1 Y 1 A ARG 17 ? NH1 ? A ARG 17 NH1 6 1 Y 1 A ARG 17 ? NH2 ? A ARG 17 NH2 7 1 Y 1 A LYS 45 ? CG ? A LYS 45 CG 8 1 Y 1 A LYS 45 ? CD ? A LYS 45 CD 9 1 Y 1 A LYS 45 ? CE ? A LYS 45 CE 10 1 Y 1 A LYS 45 ? NZ ? A LYS 45 NZ 11 1 Y 1 A GLU 54 ? CG ? A GLU 54 CG 12 1 Y 1 A GLU 54 ? CD ? A GLU 54 CD 13 1 Y 1 A GLU 54 ? OE1 ? A GLU 54 OE1 14 1 Y 1 A GLU 54 ? OE2 ? A GLU 54 OE2 15 1 Y 1 A ARG 59 ? CG ? A ARG 59 CG 16 1 Y 1 A ARG 59 ? CD ? A ARG 59 CD 17 1 Y 1 A ARG 59 ? NE ? A ARG 59 NE 18 1 Y 1 A ARG 59 ? CZ ? A ARG 59 CZ 19 1 Y 1 A ARG 59 ? NH1 ? A ARG 59 NH1 20 1 Y 1 A ARG 59 ? NH2 ? A ARG 59 NH2 21 1 Y 1 B ASP 6 ? CG ? B ASP 6 CG 22 1 Y 1 B ASP 6 ? OD1 ? B ASP 6 OD1 23 1 Y 1 B ASP 6 ? OD2 ? B ASP 6 OD2 24 1 Y 1 B ARG 17 ? CG ? B ARG 17 CG 25 1 Y 1 B ARG 17 ? CD ? B ARG 17 CD 26 1 Y 1 B ARG 17 ? NE ? B ARG 17 NE 27 1 Y 1 B ARG 17 ? CZ ? B ARG 17 CZ 28 1 Y 1 B ARG 17 ? NH1 ? B ARG 17 NH1 29 1 Y 1 B ARG 17 ? NH2 ? B ARG 17 NH2 30 1 Y 1 B GLU 54 ? CG ? B GLU 54 CG 31 1 Y 1 B GLU 54 ? CD ? B GLU 54 CD 32 1 Y 1 B GLU 54 ? OE1 ? B GLU 54 OE1 33 1 Y 1 B GLU 54 ? OE2 ? B GLU 54 OE2 34 1 Y 1 B LYS 55 ? CG ? B LYS 55 CG 35 1 Y 1 B LYS 55 ? CD ? B LYS 55 CD 36 1 Y 1 B LYS 55 ? CE ? B LYS 55 CE 37 1 Y 1 B LYS 55 ? NZ ? B LYS 55 NZ 38 1 Y 1 B LYS 56 ? CG ? B LYS 56 CG 39 1 Y 1 B LYS 56 ? CD ? B LYS 56 CD 40 1 Y 1 B LYS 56 ? CE ? B LYS 56 CE 41 1 Y 1 B LYS 56 ? NZ ? B LYS 56 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNX refinement 2002 ? 1 MAR345 'data collection' . ? 2 SCALEPACK 'data scaling' . ? 3 AMoRE phasing . ? 4 # _cell.entry_id 1U4L _cell.length_a 24.017 _cell.length_b 56.350 _cell.length_c 94.412 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1U4L _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1U4L _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.0 _exptl_crystal.density_percent_sol 37.9 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_details ;15% (w/v) PEG 400, 100mM acetate buffer, 1mM Heparin Disaccharide I-S, 10% (w/v) glycerol, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2000-07-19 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Osmic MaxFlux Confocal Mirrors' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'ENRAF-NONIUS FR571' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1U4L _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 2.0 _reflns.number_obs 9099 _reflns.number_all ? _reflns.percent_possible_obs 98.8 _reflns.pdbx_Rmerge_I_obs 0.065 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20.3 _reflns.B_iso_Wilson_estimate 12.8 _reflns.pdbx_redundancy 4.25 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 98.7 _reflns_shell.Rmerge_I_obs 0.216 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 6.75 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 860 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1U4L _refine.ls_number_reflns_obs 9067 _refine.ls_number_reflns_all 9067 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1059581.91 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 15.16 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 98.8 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.198 _refine.ls_R_factor_R_free 0.255 _refine.ls_R_factor_R_free_error 0.011 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.5 _refine.ls_number_reflns_R_free 497 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 24.0 _refine.aniso_B[1][1] 8.50 _refine.aniso_B[2][2] -7.21 _refine.aniso_B[3][3] -1.29 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details BABINET _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol 280.0 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model 'PDB ENTRY 1EQT' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1U4L _refine_analyze.Luzzati_coordinate_error_obs 0.20 _refine_analyze.Luzzati_sigma_a_obs 0.08 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.26 _refine_analyze.Luzzati_sigma_a_free 0.13 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1030 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 35 _refine_hist.number_atoms_solvent 163 _refine_hist.number_atoms_total 1228 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 15.16 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.0 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.81 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.34 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.13 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.97 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.83 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.00 _refine_ls_shell.d_res_low 2.13 _refine_ls_shell.number_reflns_R_work 1378 _refine_ls_shell.R_factor_R_work 0.191 _refine_ls_shell.percent_reflns_obs 97.9 _refine_ls_shell.R_factor_R_free 0.255 _refine_ls_shell.R_factor_R_free_error 0.031 _refine_ls_shell.percent_reflns_R_free 4.6 _refine_ls_shell.number_reflns_R_free 66 _refine_ls_shell.number_reflns_obs 1444 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1U4L _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1U4L _struct.title 'human RANTES complexed to heparin-derived disaccharide I-S' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1U4L _struct_keywords.pdbx_keywords ATTRACTANT _struct_keywords.text 'CHEMOATTRACTANT, CYTOKINE, CHEMOKINE, RANTES, GLYCOSAMINOGLYCAN, PROTEIN-HEPARIN DISACCHARIDE COMPLEX, attractant' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CCL5_HUMAN _struct_ref.pdbx_db_accession P13501 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code SPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLEMS _struct_ref.pdbx_align_begin 24 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1U4L A 1 ? 68 ? P13501 24 ? 91 ? 1 68 2 1 1U4L B 1 ? 68 ? P13501 24 ? 91 ? 1 68 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1790 ? 1 MORE -19 ? 1 'SSA (A^2)' 8140 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 21 ? HIS A 23 ? ARG A 21 HIS A 23 1 ? 3 HELX_P HELX_P2 2 LYS A 56 ? LEU A 65 ? LYS A 56 LEU A 65 1 ? 10 HELX_P HELX_P3 3 ARG B 21 ? HIS B 23 ? ARG B 21 HIS B 23 1 ? 3 HELX_P HELX_P4 4 LYS B 56 ? MET B 67 ? LYS B 56 MET B 67 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 10 SG ? ? ? 1_555 A CYS 34 SG ? ? A CYS 10 A CYS 34 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf2 disulf ? ? A CYS 11 SG ? ? ? 1_555 A CYS 50 SG ? ? A CYS 11 A CYS 50 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf3 disulf ? ? B CYS 10 SG ? ? ? 1_555 B CYS 34 SG ? ? B CYS 10 B CYS 34 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf4 disulf ? ? B CYS 11 SG ? ? ? 1_555 B CYS 50 SG ? ? B CYS 11 B CYS 50 1_555 ? ? ? ? ? ? ? 2.027 ? ? covale1 covale both ? C SGN . O4 ? ? ? 1_555 C UAP . C1 ? ? C SGN 1 C UAP 2 1_555 ? ? ? ? ? ? ? 1.467 sing ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 10 ? CYS A 34 ? CYS A 10 ? 1_555 CYS A 34 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 11 ? CYS A 50 ? CYS A 11 ? 1_555 CYS A 50 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS B 10 ? CYS B 34 ? CYS B 10 ? 1_555 CYS B 34 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 11 ? CYS B 50 ? CYS B 11 ? 1_555 CYS B 50 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details 1 ? 1 ? 2 ? 1 ? 3 ? 1 ? 4 ? 1 ? 5 ? 1 ? 6 ? 1 ? 7 ? 1 ? 8 ? 1 ? # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id 1 1 THR A 8 ? CYS A 10 ? THR A 8 CYS A 10 2 1 ILE A 24 ? TYR A 29 ? ILE A 24 TYR A 29 3 1 VAL A 39 ? THR A 43 ? VAL A 39 THR A 43 4 1 GLN A 48 ? ALA A 51 ? GLN A 48 ALA A 51 5 1 THR B 8 ? CYS B 10 ? THR B 8 CYS B 10 6 1 ILE B 24 ? TYR B 29 ? ILE B 24 TYR B 29 7 1 VAL B 39 ? THR B 43 ? VAL B 39 THR B 43 8 1 GLN B 48 ? ALA B 51 ? GLN B 48 ALA B 51 # _pdbx_entry_details.entry_id 1U4L _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_molecule_features.prd_id PRD_900026 _pdbx_molecule_features.name 'HEPARIN DISACCHARIDE I-S,' _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class 'Substrate analog' _pdbx_molecule_features.details 'oligosaccharide with ring modification on monosaccharide components' # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900026 _pdbx_molecule.asym_id C # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 1 ? A SER 1 2 1 Y 1 B SER 1 ? B SER 1 3 1 Y 1 B PRO 2 ? B PRO 2 4 1 Y 1 B TYR 3 ? B TYR 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACY C C N N 1 ACY O O N N 2 ACY OXT O N N 3 ACY CH3 C N N 4 ACY HXT H N N 5 ACY H1 H N N 6 ACY H2 H N N 7 ACY H3 H N N 8 ALA N N N N 9 ALA CA C N S 10 ALA C C N N 11 ALA O O N N 12 ALA CB C N N 13 ALA OXT O N N 14 ALA H H N N 15 ALA H2 H N N 16 ALA HA H N N 17 ALA HB1 H N N 18 ALA HB2 H N N 19 ALA HB3 H N N 20 ALA HXT H N N 21 ARG N N N N 22 ARG CA C N S 23 ARG C C N N 24 ARG O O N N 25 ARG CB C N N 26 ARG CG C N N 27 ARG CD C N N 28 ARG NE N N N 29 ARG CZ C N N 30 ARG NH1 N N N 31 ARG NH2 N N N 32 ARG OXT O N N 33 ARG H H N N 34 ARG H2 H N N 35 ARG HA H N N 36 ARG HB2 H N N 37 ARG HB3 H N N 38 ARG HG2 H N N 39 ARG HG3 H N N 40 ARG HD2 H N N 41 ARG HD3 H N N 42 ARG HE H N N 43 ARG HH11 H N N 44 ARG HH12 H N N 45 ARG HH21 H N N 46 ARG HH22 H N N 47 ARG HXT H N N 48 ASN N N N N 49 ASN CA C N S 50 ASN C C N N 51 ASN O O N N 52 ASN CB C N N 53 ASN CG C N N 54 ASN OD1 O N N 55 ASN ND2 N N N 56 ASN OXT O N N 57 ASN H H N N 58 ASN H2 H N N 59 ASN HA H N N 60 ASN HB2 H N N 61 ASN HB3 H N N 62 ASN HD21 H N N 63 ASN HD22 H N N 64 ASN HXT H N N 65 ASP N N N N 66 ASP CA C N S 67 ASP C C N N 68 ASP O O N N 69 ASP CB C N N 70 ASP CG C N N 71 ASP OD1 O N N 72 ASP OD2 O N N 73 ASP OXT O N N 74 ASP H H N N 75 ASP H2 H N N 76 ASP HA H N N 77 ASP HB2 H N N 78 ASP HB3 H N N 79 ASP HD2 H N N 80 ASP HXT H N N 81 CYS N N N N 82 CYS CA C N R 83 CYS C C N N 84 CYS O O N N 85 CYS CB C N N 86 CYS SG S N N 87 CYS OXT O N N 88 CYS H H N N 89 CYS H2 H N N 90 CYS HA H N N 91 CYS HB2 H N N 92 CYS HB3 H N N 93 CYS HG H N N 94 CYS HXT H N N 95 GLN N N N N 96 GLN CA C N S 97 GLN C C N N 98 GLN O O N N 99 GLN CB C N N 100 GLN CG C N N 101 GLN CD C N N 102 GLN OE1 O N N 103 GLN NE2 N N N 104 GLN OXT O N N 105 GLN H H N N 106 GLN H2 H N N 107 GLN HA H N N 108 GLN HB2 H N N 109 GLN HB3 H N N 110 GLN HG2 H N N 111 GLN HG3 H N N 112 GLN HE21 H N N 113 GLN HE22 H N N 114 GLN HXT H N N 115 GLU N N N N 116 GLU CA C N S 117 GLU C C N N 118 GLU O O N N 119 GLU CB C N N 120 GLU CG C N N 121 GLU CD C N N 122 GLU OE1 O N N 123 GLU OE2 O N N 124 GLU OXT O N N 125 GLU H H N N 126 GLU H2 H N N 127 GLU HA H N N 128 GLU HB2 H N N 129 GLU HB3 H N N 130 GLU HG2 H N N 131 GLU HG3 H N N 132 GLU HE2 H N N 133 GLU HXT H N N 134 GLY N N N N 135 GLY CA C N N 136 GLY C C N N 137 GLY O O N N 138 GLY OXT O N N 139 GLY H H N N 140 GLY H2 H N N 141 GLY HA2 H N N 142 GLY HA3 H N N 143 GLY HXT H N N 144 HIS N N N N 145 HIS CA C N S 146 HIS C C N N 147 HIS O O N N 148 HIS CB C N N 149 HIS CG C Y N 150 HIS ND1 N Y N 151 HIS CD2 C Y N 152 HIS CE1 C Y N 153 HIS NE2 N Y N 154 HIS OXT O N N 155 HIS H H N N 156 HIS H2 H N N 157 HIS HA H N N 158 HIS HB2 H N N 159 HIS HB3 H N N 160 HIS HD1 H N N 161 HIS HD2 H N N 162 HIS HE1 H N N 163 HIS HE2 H N N 164 HIS HXT H N N 165 HOH O O N N 166 HOH H1 H N N 167 HOH H2 H N N 168 ILE N N N N 169 ILE CA C N S 170 ILE C C N N 171 ILE O O N N 172 ILE CB C N S 173 ILE CG1 C N N 174 ILE CG2 C N N 175 ILE CD1 C N N 176 ILE OXT O N N 177 ILE H H N N 178 ILE H2 H N N 179 ILE HA H N N 180 ILE HB H N N 181 ILE HG12 H N N 182 ILE HG13 H N N 183 ILE HG21 H N N 184 ILE HG22 H N N 185 ILE HG23 H N N 186 ILE HD11 H N N 187 ILE HD12 H N N 188 ILE HD13 H N N 189 ILE HXT H N N 190 LEU N N N N 191 LEU CA C N S 192 LEU C C N N 193 LEU O O N N 194 LEU CB C N N 195 LEU CG C N N 196 LEU CD1 C N N 197 LEU CD2 C N N 198 LEU OXT O N N 199 LEU H H N N 200 LEU H2 H N N 201 LEU HA H N N 202 LEU HB2 H N N 203 LEU HB3 H N N 204 LEU HG H N N 205 LEU HD11 H N N 206 LEU HD12 H N N 207 LEU HD13 H N N 208 LEU HD21 H N N 209 LEU HD22 H N N 210 LEU HD23 H N N 211 LEU HXT H N N 212 LYS N N N N 213 LYS CA C N S 214 LYS C C N N 215 LYS O O N N 216 LYS CB C N N 217 LYS CG C N N 218 LYS CD C N N 219 LYS CE C N N 220 LYS NZ N N N 221 LYS OXT O N N 222 LYS H H N N 223 LYS H2 H N N 224 LYS HA H N N 225 LYS HB2 H N N 226 LYS HB3 H N N 227 LYS HG2 H N N 228 LYS HG3 H N N 229 LYS HD2 H N N 230 LYS HD3 H N N 231 LYS HE2 H N N 232 LYS HE3 H N N 233 LYS HZ1 H N N 234 LYS HZ2 H N N 235 LYS HZ3 H N N 236 LYS HXT H N N 237 MET N N N N 238 MET CA C N S 239 MET C C N N 240 MET O O N N 241 MET CB C N N 242 MET CG C N N 243 MET SD S N N 244 MET CE C N N 245 MET OXT O N N 246 MET H H N N 247 MET H2 H N N 248 MET HA H N N 249 MET HB2 H N N 250 MET HB3 H N N 251 MET HG2 H N N 252 MET HG3 H N N 253 MET HE1 H N N 254 MET HE2 H N N 255 MET HE3 H N N 256 MET HXT H N N 257 PHE N N N N 258 PHE CA C N S 259 PHE C C N N 260 PHE O O N N 261 PHE CB C N N 262 PHE CG C Y N 263 PHE CD1 C Y N 264 PHE CD2 C Y N 265 PHE CE1 C Y N 266 PHE CE2 C Y N 267 PHE CZ C Y N 268 PHE OXT O N N 269 PHE H H N N 270 PHE H2 H N N 271 PHE HA H N N 272 PHE HB2 H N N 273 PHE HB3 H N N 274 PHE HD1 H N N 275 PHE HD2 H N N 276 PHE HE1 H N N 277 PHE HE2 H N N 278 PHE HZ H N N 279 PHE HXT H N N 280 PRO N N N N 281 PRO CA C N S 282 PRO C C N N 283 PRO O O N N 284 PRO CB C N N 285 PRO CG C N N 286 PRO CD C N N 287 PRO OXT O N N 288 PRO H H N N 289 PRO HA H N N 290 PRO HB2 H N N 291 PRO HB3 H N N 292 PRO HG2 H N N 293 PRO HG3 H N N 294 PRO HD2 H N N 295 PRO HD3 H N N 296 PRO HXT H N N 297 SER N N N N 298 SER CA C N S 299 SER C C N N 300 SER O O N N 301 SER CB C N N 302 SER OG O N N 303 SER OXT O N N 304 SER H H N N 305 SER H2 H N N 306 SER HA H N N 307 SER HB2 H N N 308 SER HB3 H N N 309 SER HG H N N 310 SER HXT H N N 311 SGN C1 C N S 312 SGN C2 C N R 313 SGN C3 C N R 314 SGN C4 C N S 315 SGN C5 C N R 316 SGN C6 C N N 317 SGN N2 N N N 318 SGN O1 O N N 319 SGN O3 O N N 320 SGN O4 O N N 321 SGN O5 O N N 322 SGN O6 O N N 323 SGN S1 S N N 324 SGN O1S O N N 325 SGN O2S O N N 326 SGN O3S O N N 327 SGN S2 S N N 328 SGN O4S O N N 329 SGN O5S O N N 330 SGN O6S O N N 331 SGN H1 H N N 332 SGN H2 H N N 333 SGN H3 H N N 334 SGN H4 H N N 335 SGN H5 H N N 336 SGN H61 H N N 337 SGN H62 H N N 338 SGN HN21 H N N 339 SGN HO1 H N N 340 SGN HO3 H N N 341 SGN HO4 H N N 342 SGN HOS3 H N N 343 SGN HOS6 H N N 344 THR N N N N 345 THR CA C N S 346 THR C C N N 347 THR O O N N 348 THR CB C N R 349 THR OG1 O N N 350 THR CG2 C N N 351 THR OXT O N N 352 THR H H N N 353 THR H2 H N N 354 THR HA H N N 355 THR HB H N N 356 THR HG1 H N N 357 THR HG21 H N N 358 THR HG22 H N N 359 THR HG23 H N N 360 THR HXT H N N 361 TRP N N N N 362 TRP CA C N S 363 TRP C C N N 364 TRP O O N N 365 TRP CB C N N 366 TRP CG C Y N 367 TRP CD1 C Y N 368 TRP CD2 C Y N 369 TRP NE1 N Y N 370 TRP CE2 C Y N 371 TRP CE3 C Y N 372 TRP CZ2 C Y N 373 TRP CZ3 C Y N 374 TRP CH2 C Y N 375 TRP OXT O N N 376 TRP H H N N 377 TRP H2 H N N 378 TRP HA H N N 379 TRP HB2 H N N 380 TRP HB3 H N N 381 TRP HD1 H N N 382 TRP HE1 H N N 383 TRP HE3 H N N 384 TRP HZ2 H N N 385 TRP HZ3 H N N 386 TRP HH2 H N N 387 TRP HXT H N N 388 TYR N N N N 389 TYR CA C N S 390 TYR C C N N 391 TYR O O N N 392 TYR CB C N N 393 TYR CG C Y N 394 TYR CD1 C Y N 395 TYR CD2 C Y N 396 TYR CE1 C Y N 397 TYR CE2 C Y N 398 TYR CZ C Y N 399 TYR OH O N N 400 TYR OXT O N N 401 TYR H H N N 402 TYR H2 H N N 403 TYR HA H N N 404 TYR HB2 H N N 405 TYR HB3 H N N 406 TYR HD1 H N N 407 TYR HD2 H N N 408 TYR HE1 H N N 409 TYR HE2 H N N 410 TYR HH H N N 411 TYR HXT H N N 412 UAP S S N N 413 UAP C1 C N R 414 UAP O1 O N N 415 UAP C2 C N R 416 UAP O2 O N N 417 UAP C3 C N S 418 UAP O3 O N N 419 UAP C4 C N N 420 UAP C5 C N N 421 UAP O5 O N N 422 UAP C6 C N N 423 UAP O1S O N N 424 UAP O2S O N N 425 UAP O3S O N N 426 UAP O6B O N N 427 UAP O6A O N N 428 UAP H1 H N N 429 UAP HO1 H N N 430 UAP H2 H N N 431 UAP H3 H N N 432 UAP HO3 H N N 433 UAP H4 H N N 434 UAP HO1S H N N 435 UAP HO6B H N N 436 VAL N N N N 437 VAL CA C N S 438 VAL C C N N 439 VAL O O N N 440 VAL CB C N N 441 VAL CG1 C N N 442 VAL CG2 C N N 443 VAL OXT O N N 444 VAL H H N N 445 VAL H2 H N N 446 VAL HA H N N 447 VAL HB H N N 448 VAL HG11 H N N 449 VAL HG12 H N N 450 VAL HG13 H N N 451 VAL HG21 H N N 452 VAL HG22 H N N 453 VAL HG23 H N N 454 VAL HXT H N N 455 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACY C O doub N N 1 ACY C OXT sing N N 2 ACY C CH3 sing N N 3 ACY OXT HXT sing N N 4 ACY CH3 H1 sing N N 5 ACY CH3 H2 sing N N 6 ACY CH3 H3 sing N N 7 ALA N CA sing N N 8 ALA N H sing N N 9 ALA N H2 sing N N 10 ALA CA C sing N N 11 ALA CA CB sing N N 12 ALA CA HA sing N N 13 ALA C O doub N N 14 ALA C OXT sing N N 15 ALA CB HB1 sing N N 16 ALA CB HB2 sing N N 17 ALA CB HB3 sing N N 18 ALA OXT HXT sing N N 19 ARG N CA sing N N 20 ARG N H sing N N 21 ARG N H2 sing N N 22 ARG CA C sing N N 23 ARG CA CB sing N N 24 ARG CA HA sing N N 25 ARG C O doub N N 26 ARG C OXT sing N N 27 ARG CB CG sing N N 28 ARG CB HB2 sing N N 29 ARG CB HB3 sing N N 30 ARG CG CD sing N N 31 ARG CG HG2 sing N N 32 ARG CG HG3 sing N N 33 ARG CD NE sing N N 34 ARG CD HD2 sing N N 35 ARG CD HD3 sing N N 36 ARG NE CZ sing N N 37 ARG NE HE sing N N 38 ARG CZ NH1 sing N N 39 ARG CZ NH2 doub N N 40 ARG NH1 HH11 sing N N 41 ARG NH1 HH12 sing N N 42 ARG NH2 HH21 sing N N 43 ARG NH2 HH22 sing N N 44 ARG OXT HXT sing N N 45 ASN N CA sing N N 46 ASN N H sing N N 47 ASN N H2 sing N N 48 ASN CA C sing N N 49 ASN CA CB sing N N 50 ASN CA HA sing N N 51 ASN C O doub N N 52 ASN C OXT sing N N 53 ASN CB CG sing N N 54 ASN CB HB2 sing N N 55 ASN CB HB3 sing N N 56 ASN CG OD1 doub N N 57 ASN CG ND2 sing N N 58 ASN ND2 HD21 sing N N 59 ASN ND2 HD22 sing N N 60 ASN OXT HXT sing N N 61 ASP N CA sing N N 62 ASP N H sing N N 63 ASP N H2 sing N N 64 ASP CA C sing N N 65 ASP CA CB sing N N 66 ASP CA HA sing N N 67 ASP C O doub N N 68 ASP C OXT sing N N 69 ASP CB CG sing N N 70 ASP CB HB2 sing N N 71 ASP CB HB3 sing N N 72 ASP CG OD1 doub N N 73 ASP CG OD2 sing N N 74 ASP OD2 HD2 sing N N 75 ASP OXT HXT sing N N 76 CYS N CA sing N N 77 CYS N H sing N N 78 CYS N H2 sing N N 79 CYS CA C sing N N 80 CYS CA CB sing N N 81 CYS CA HA sing N N 82 CYS C O doub N N 83 CYS C OXT sing N N 84 CYS CB SG sing N N 85 CYS CB HB2 sing N N 86 CYS CB HB3 sing N N 87 CYS SG HG sing N N 88 CYS OXT HXT sing N N 89 GLN N CA sing N N 90 GLN N H sing N N 91 GLN N H2 sing N N 92 GLN CA C sing N N 93 GLN CA CB sing N N 94 GLN CA HA sing N N 95 GLN C O doub N N 96 GLN C OXT sing N N 97 GLN CB CG sing N N 98 GLN CB HB2 sing N N 99 GLN CB HB3 sing N N 100 GLN CG CD sing N N 101 GLN CG HG2 sing N N 102 GLN CG HG3 sing N N 103 GLN CD OE1 doub N N 104 GLN CD NE2 sing N N 105 GLN NE2 HE21 sing N N 106 GLN NE2 HE22 sing N N 107 GLN OXT HXT sing N N 108 GLU N CA sing N N 109 GLU N H sing N N 110 GLU N H2 sing N N 111 GLU CA C sing N N 112 GLU CA CB sing N N 113 GLU CA HA sing N N 114 GLU C O doub N N 115 GLU C OXT sing N N 116 GLU CB CG sing N N 117 GLU CB HB2 sing N N 118 GLU CB HB3 sing N N 119 GLU CG CD sing N N 120 GLU CG HG2 sing N N 121 GLU CG HG3 sing N N 122 GLU CD OE1 doub N N 123 GLU CD OE2 sing N N 124 GLU OE2 HE2 sing N N 125 GLU OXT HXT sing N N 126 GLY N CA sing N N 127 GLY N H sing N N 128 GLY N H2 sing N N 129 GLY CA C sing N N 130 GLY CA HA2 sing N N 131 GLY CA HA3 sing N N 132 GLY C O doub N N 133 GLY C OXT sing N N 134 GLY OXT HXT sing N N 135 HIS N CA sing N N 136 HIS N H sing N N 137 HIS N H2 sing N N 138 HIS CA C sing N N 139 HIS CA CB sing N N 140 HIS CA HA sing N N 141 HIS C O doub N N 142 HIS C OXT sing N N 143 HIS CB CG sing N N 144 HIS CB HB2 sing N N 145 HIS CB HB3 sing N N 146 HIS CG ND1 sing Y N 147 HIS CG CD2 doub Y N 148 HIS ND1 CE1 doub Y N 149 HIS ND1 HD1 sing N N 150 HIS CD2 NE2 sing Y N 151 HIS CD2 HD2 sing N N 152 HIS CE1 NE2 sing Y N 153 HIS CE1 HE1 sing N N 154 HIS NE2 HE2 sing N N 155 HIS OXT HXT sing N N 156 HOH O H1 sing N N 157 HOH O H2 sing N N 158 ILE N CA sing N N 159 ILE N H sing N N 160 ILE N H2 sing N N 161 ILE CA C sing N N 162 ILE CA CB sing N N 163 ILE CA HA sing N N 164 ILE C O doub N N 165 ILE C OXT sing N N 166 ILE CB CG1 sing N N 167 ILE CB CG2 sing N N 168 ILE CB HB sing N N 169 ILE CG1 CD1 sing N N 170 ILE CG1 HG12 sing N N 171 ILE CG1 HG13 sing N N 172 ILE CG2 HG21 sing N N 173 ILE CG2 HG22 sing N N 174 ILE CG2 HG23 sing N N 175 ILE CD1 HD11 sing N N 176 ILE CD1 HD12 sing N N 177 ILE CD1 HD13 sing N N 178 ILE OXT HXT sing N N 179 LEU N CA sing N N 180 LEU N H sing N N 181 LEU N H2 sing N N 182 LEU CA C sing N N 183 LEU CA CB sing N N 184 LEU CA HA sing N N 185 LEU C O doub N N 186 LEU C OXT sing N N 187 LEU CB CG sing N N 188 LEU CB HB2 sing N N 189 LEU CB HB3 sing N N 190 LEU CG CD1 sing N N 191 LEU CG CD2 sing N N 192 LEU CG HG sing N N 193 LEU CD1 HD11 sing N N 194 LEU CD1 HD12 sing N N 195 LEU CD1 HD13 sing N N 196 LEU CD2 HD21 sing N N 197 LEU CD2 HD22 sing N N 198 LEU CD2 HD23 sing N N 199 LEU OXT HXT sing N N 200 LYS N CA sing N N 201 LYS N H sing N N 202 LYS N H2 sing N N 203 LYS CA C sing N N 204 LYS CA CB sing N N 205 LYS CA HA sing N N 206 LYS C O doub N N 207 LYS C OXT sing N N 208 LYS CB CG sing N N 209 LYS CB HB2 sing N N 210 LYS CB HB3 sing N N 211 LYS CG CD sing N N 212 LYS CG HG2 sing N N 213 LYS CG HG3 sing N N 214 LYS CD CE sing N N 215 LYS CD HD2 sing N N 216 LYS CD HD3 sing N N 217 LYS CE NZ sing N N 218 LYS CE HE2 sing N N 219 LYS CE HE3 sing N N 220 LYS NZ HZ1 sing N N 221 LYS NZ HZ2 sing N N 222 LYS NZ HZ3 sing N N 223 LYS OXT HXT sing N N 224 MET N CA sing N N 225 MET N H sing N N 226 MET N H2 sing N N 227 MET CA C sing N N 228 MET CA CB sing N N 229 MET CA HA sing N N 230 MET C O doub N N 231 MET C OXT sing N N 232 MET CB CG sing N N 233 MET CB HB2 sing N N 234 MET CB HB3 sing N N 235 MET CG SD sing N N 236 MET CG HG2 sing N N 237 MET CG HG3 sing N N 238 MET SD CE sing N N 239 MET CE HE1 sing N N 240 MET CE HE2 sing N N 241 MET CE HE3 sing N N 242 MET OXT HXT sing N N 243 PHE N CA sing N N 244 PHE N H sing N N 245 PHE N H2 sing N N 246 PHE CA C sing N N 247 PHE CA CB sing N N 248 PHE CA HA sing N N 249 PHE C O doub N N 250 PHE C OXT sing N N 251 PHE CB CG sing N N 252 PHE CB HB2 sing N N 253 PHE CB HB3 sing N N 254 PHE CG CD1 doub Y N 255 PHE CG CD2 sing Y N 256 PHE CD1 CE1 sing Y N 257 PHE CD1 HD1 sing N N 258 PHE CD2 CE2 doub Y N 259 PHE CD2 HD2 sing N N 260 PHE CE1 CZ doub Y N 261 PHE CE1 HE1 sing N N 262 PHE CE2 CZ sing Y N 263 PHE CE2 HE2 sing N N 264 PHE CZ HZ sing N N 265 PHE OXT HXT sing N N 266 PRO N CA sing N N 267 PRO N CD sing N N 268 PRO N H sing N N 269 PRO CA C sing N N 270 PRO CA CB sing N N 271 PRO CA HA sing N N 272 PRO C O doub N N 273 PRO C OXT sing N N 274 PRO CB CG sing N N 275 PRO CB HB2 sing N N 276 PRO CB HB3 sing N N 277 PRO CG CD sing N N 278 PRO CG HG2 sing N N 279 PRO CG HG3 sing N N 280 PRO CD HD2 sing N N 281 PRO CD HD3 sing N N 282 PRO OXT HXT sing N N 283 SER N CA sing N N 284 SER N H sing N N 285 SER N H2 sing N N 286 SER CA C sing N N 287 SER CA CB sing N N 288 SER CA HA sing N N 289 SER C O doub N N 290 SER C OXT sing N N 291 SER CB OG sing N N 292 SER CB HB2 sing N N 293 SER CB HB3 sing N N 294 SER OG HG sing N N 295 SER OXT HXT sing N N 296 SGN C1 C2 sing N N 297 SGN C1 O1 sing N N 298 SGN C1 O5 sing N N 299 SGN C1 H1 sing N N 300 SGN C2 C3 sing N N 301 SGN C2 N2 sing N N 302 SGN C2 H2 sing N N 303 SGN C3 C4 sing N N 304 SGN C3 O3 sing N N 305 SGN C3 H3 sing N N 306 SGN C4 C5 sing N N 307 SGN C4 O4 sing N N 308 SGN C4 H4 sing N N 309 SGN C5 C6 sing N N 310 SGN C5 O5 sing N N 311 SGN C5 H5 sing N N 312 SGN C6 O6 sing N N 313 SGN C6 H61 sing N N 314 SGN C6 H62 sing N N 315 SGN N2 S1 sing N N 316 SGN N2 HN21 sing N N 317 SGN O1 HO1 sing N N 318 SGN O3 HO3 sing N N 319 SGN O4 HO4 sing N N 320 SGN O6 S2 sing N N 321 SGN S1 O1S doub N N 322 SGN S1 O2S doub N N 323 SGN S1 O3S sing N N 324 SGN O3S HOS3 sing N N 325 SGN S2 O4S doub N N 326 SGN S2 O5S doub N N 327 SGN S2 O6S sing N N 328 SGN O6S HOS6 sing N N 329 THR N CA sing N N 330 THR N H sing N N 331 THR N H2 sing N N 332 THR CA C sing N N 333 THR CA CB sing N N 334 THR CA HA sing N N 335 THR C O doub N N 336 THR C OXT sing N N 337 THR CB OG1 sing N N 338 THR CB CG2 sing N N 339 THR CB HB sing N N 340 THR OG1 HG1 sing N N 341 THR CG2 HG21 sing N N 342 THR CG2 HG22 sing N N 343 THR CG2 HG23 sing N N 344 THR OXT HXT sing N N 345 TRP N CA sing N N 346 TRP N H sing N N 347 TRP N H2 sing N N 348 TRP CA C sing N N 349 TRP CA CB sing N N 350 TRP CA HA sing N N 351 TRP C O doub N N 352 TRP C OXT sing N N 353 TRP CB CG sing N N 354 TRP CB HB2 sing N N 355 TRP CB HB3 sing N N 356 TRP CG CD1 doub Y N 357 TRP CG CD2 sing Y N 358 TRP CD1 NE1 sing Y N 359 TRP CD1 HD1 sing N N 360 TRP CD2 CE2 doub Y N 361 TRP CD2 CE3 sing Y N 362 TRP NE1 CE2 sing Y N 363 TRP NE1 HE1 sing N N 364 TRP CE2 CZ2 sing Y N 365 TRP CE3 CZ3 doub Y N 366 TRP CE3 HE3 sing N N 367 TRP CZ2 CH2 doub Y N 368 TRP CZ2 HZ2 sing N N 369 TRP CZ3 CH2 sing Y N 370 TRP CZ3 HZ3 sing N N 371 TRP CH2 HH2 sing N N 372 TRP OXT HXT sing N N 373 TYR N CA sing N N 374 TYR N H sing N N 375 TYR N H2 sing N N 376 TYR CA C sing N N 377 TYR CA CB sing N N 378 TYR CA HA sing N N 379 TYR C O doub N N 380 TYR C OXT sing N N 381 TYR CB CG sing N N 382 TYR CB HB2 sing N N 383 TYR CB HB3 sing N N 384 TYR CG CD1 doub Y N 385 TYR CG CD2 sing Y N 386 TYR CD1 CE1 sing Y N 387 TYR CD1 HD1 sing N N 388 TYR CD2 CE2 doub Y N 389 TYR CD2 HD2 sing N N 390 TYR CE1 CZ doub Y N 391 TYR CE1 HE1 sing N N 392 TYR CE2 CZ sing Y N 393 TYR CE2 HE2 sing N N 394 TYR CZ OH sing N N 395 TYR OH HH sing N N 396 TYR OXT HXT sing N N 397 UAP O2 S sing N N 398 UAP S O2S doub N N 399 UAP S O3S doub N N 400 UAP S O1S sing N N 401 UAP O5 C1 sing N N 402 UAP O1 C1 sing N N 403 UAP C1 C2 sing N N 404 UAP C1 H1 sing N N 405 UAP O1 HO1 sing N N 406 UAP C3 C2 sing N N 407 UAP C2 O2 sing N N 408 UAP C2 H2 sing N N 409 UAP C4 C3 sing N N 410 UAP O3 C3 sing N N 411 UAP C3 H3 sing N N 412 UAP O3 HO3 sing N N 413 UAP C5 C4 doub N N 414 UAP C4 H4 sing N N 415 UAP C6 C5 sing N N 416 UAP C5 O5 sing N N 417 UAP O6A C6 doub N N 418 UAP O6B C6 sing N N 419 UAP O1S HO1S sing N N 420 UAP O6B HO6B sing N N 421 VAL N CA sing N N 422 VAL N H sing N N 423 VAL N H2 sing N N 424 VAL CA C sing N N 425 VAL CA CB sing N N 426 VAL CA HA sing N N 427 VAL C O doub N N 428 VAL C OXT sing N N 429 VAL CB CG1 sing N N 430 VAL CB CG2 sing N N 431 VAL CB HB sing N N 432 VAL CG1 HG11 sing N N 433 VAL CG1 HG12 sing N N 434 VAL CG1 HG13 sing N N 435 VAL CG2 HG21 sing N N 436 VAL CG2 HG22 sing N N 437 VAL CG2 HG23 sing N N 438 VAL OXT HXT sing N N 439 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 SGN 1 n 2 UAP 2 n # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1EQT _pdbx_initial_refinement_model.details 'PDB ENTRY 1EQT' # _atom_sites.entry_id 1U4L _atom_sites.fract_transf_matrix[1][1] 0.041637 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017746 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010592 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_