HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 29-JUL-04 1U69 TITLE CRYSTAL STRUCTURE OF PA2721 PROTEIN OF UNKNOWN FUNCTION FROM TITLE 2 PSEUDOMONAS AERUGINOSA PAO1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 GENE: PA2721; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET15B KEYWDS STRUCTURAL GENOMICS, MSCG, PSEUDOMONAS AERUGINOSA PAO1, HYPOTHETICAL KEYWDS 2 PROTEIN, PROTEIN STRUCTURE INITIATIVE (PSI), MIDWEST CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, MCSG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR B.NOCEK,M.CUFF,E.EVDOKIMOVA,A.SAVCHENKO,A.EDWARDS,A.JOACHIMIAK, AUTHOR 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 6 26-NOV-14 1U69 1 REMARK REVDAT 5 13-JUL-11 1U69 1 VERSN REVDAT 4 24-FEB-09 1U69 1 VERSN REVDAT 3 04-JUL-06 1U69 1 JRNL REVDAT 2 18-JAN-05 1U69 1 AUTHOR KEYWDS REMARK REVDAT 1 21-SEP-04 1U69 0 JRNL AUTH B.NOCEK,M.CUFF,E.EVDOKIMOVA,A.EDWARDS,A.JOACHIMIAK, JRNL AUTH 2 A.SAVCHENKO JRNL TITL 1.6 A CRYSTAL STRUCTURE OF A PA2721 PROTEIN FROM PSEUDOMONAS JRNL TITL 2 AERUGINOSA--A POTENTIAL DRUG-RESISTANCE PROTEIN. JRNL REF PROTEINS V. 63 1102 2006 JRNL REFN ISSN 0887-3585 JRNL PMID 16493657 JRNL DOI 10.1002/PROT.20659 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 63.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.8 REMARK 3 NUMBER OF REFLECTIONS : 65177 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3560 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2328 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 41.74 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE SET COUNT : 122 REMARK 3 BIN FREE R VALUE : 0.2810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4670 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 544 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.21000 REMARK 3 B22 (A**2) : -0.24000 REMARK 3 B33 (A**2) : -0.10000 REMARK 3 B12 (A**2) : -0.10000 REMARK 3 B13 (A**2) : -0.11000 REMARK 3 B23 (A**2) : 0.22000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.097 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.090 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.052 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.466 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4784 ; 0.009 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 4249 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6493 ; 1.168 ; 1.922 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9821 ; 0.742 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 601 ; 5.835 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 700 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5449 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1051 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 886 ; 0.205 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4899 ; 0.246 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 2715 ; 0.080 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 333 ; 0.139 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 30 ; 0.258 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 93 ; 0.267 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 31 ; 0.167 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3016 ; 0.620 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4803 ; 1.178 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1768 ; 2.042 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1690 ; 3.295 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1U69 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-AUG-04. REMARK 100 THE RCSB ID CODE IS RCSB023297. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAY-04 REMARK 200 TEMPERATURE (KELVIN) : 150.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-2 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 79080 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 33.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 46.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CACODYLATE, 0.2M AMMONIUM REMARK 280 SULFATE, 30% PEG 8000, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K, PH 6.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 4 CHAIN(S). THE BIOLOGICAL UNIT IS REMARK 300 UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 3650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 3700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 ASN A 2 REMARK 465 GLY A 159 REMARK 465 GLY A 160 REMARK 465 SER A 161 REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 MSE B 1 REMARK 465 ASN B 2 REMARK 465 GLY B 159 REMARK 465 GLY B 160 REMARK 465 SER B 161 REMARK 465 GLY C -1 REMARK 465 HIS C 0 REMARK 465 MSE C 1 REMARK 465 ASN C 2 REMARK 465 ASP C 40 REMARK 465 TYR C 41 REMARK 465 PRO C 42 REMARK 465 SER C 43 REMARK 465 GLY C 44 REMARK 465 LYS C 45 REMARK 465 GLU C 46 REMARK 465 GLY C 47 REMARK 465 GLY C 159 REMARK 465 GLY C 160 REMARK 465 SER C 161 REMARK 465 GLY D -1 REMARK 465 HIS D 0 REMARK 465 MSE D 1 REMARK 465 ASN D 2 REMARK 465 GLY D 39 REMARK 465 ASP D 40 REMARK 465 TYR D 41 REMARK 465 PRO D 42 REMARK 465 SER D 43 REMARK 465 GLY D 44 REMARK 465 LYS D 45 REMARK 465 GLU D 46 REMARK 465 GLY D 47 REMARK 465 GLY D 159 REMARK 465 GLY D 160 REMARK 465 SER D 161 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU B 140 O HOH A 192 1545 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 28 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP B 83 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP B 131 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 103 -157.60 -138.61 REMARK 500 ASP A 131 86.44 -68.26 REMARK 500 SER B 103 -157.64 -138.48 REMARK 500 ALA C 14 17.28 -146.67 REMARK 500 ALA D 14 15.90 -151.59 REMARK 500 ASN D 98 59.83 -91.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ARG A 132 2.0 L L EXPECTING SP3 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 284 DISTANCE = 5.22 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC5038 RELATED DB: TARGETDB DBREF 1U69 A 1 159 UNP Q9I0C1 Q9I0C1_PSEAE 1 159 DBREF 1U69 B 1 159 UNP Q9I0C1 Q9I0C1_PSEAE 1 159 DBREF 1U69 C 1 159 UNP Q9I0C1 Q9I0C1_PSEAE 1 159 DBREF 1U69 D 1 159 UNP Q9I0C1 Q9I0C1_PSEAE 1 159 SEQADV 1U69 GLY A -1 UNP Q9I0C1 CLONING ARTIFACT SEQADV 1U69 HIS A 0 UNP Q9I0C1 CLONING ARTIFACT SEQADV 1U69 MSE A 1 UNP Q9I0C1 MET 1 MODIFIED RESIDUE SEQADV 1U69 MSE A 57 UNP Q9I0C1 MET 57 MODIFIED RESIDUE SEQADV 1U69 MSE A 142 UNP Q9I0C1 MET 142 MODIFIED RESIDUE SEQADV 1U69 MSE A 143 UNP Q9I0C1 MET 143 MODIFIED RESIDUE SEQADV 1U69 MSE A 145 UNP Q9I0C1 MET 145 MODIFIED RESIDUE SEQADV 1U69 GLY A 160 UNP Q9I0C1 CLONING ARTIFACT SEQADV 1U69 SER A 161 UNP Q9I0C1 CLONING ARTIFACT SEQADV 1U69 GLY B -1 UNP Q9I0C1 CLONING ARTIFACT SEQADV 1U69 HIS B 0 UNP Q9I0C1 CLONING ARTIFACT SEQADV 1U69 MSE B 1 UNP Q9I0C1 MET 1 MODIFIED RESIDUE SEQADV 1U69 MSE B 57 UNP Q9I0C1 MET 57 MODIFIED RESIDUE SEQADV 1U69 MSE B 142 UNP Q9I0C1 MET 142 MODIFIED RESIDUE SEQADV 1U69 MSE B 143 UNP Q9I0C1 MET 143 MODIFIED RESIDUE SEQADV 1U69 MSE B 145 UNP Q9I0C1 MET 145 MODIFIED RESIDUE SEQADV 1U69 GLY B 160 UNP Q9I0C1 CLONING ARTIFACT SEQADV 1U69 SER B 161 UNP Q9I0C1 CLONING ARTIFACT SEQADV 1U69 GLY C -1 UNP Q9I0C1 CLONING ARTIFACT SEQADV 1U69 HIS C 0 UNP Q9I0C1 CLONING ARTIFACT SEQADV 1U69 MSE C 1 UNP Q9I0C1 MET 1 MODIFIED RESIDUE SEQADV 1U69 MSE C 57 UNP Q9I0C1 MET 57 MODIFIED RESIDUE SEQADV 1U69 MSE C 142 UNP Q9I0C1 MET 142 MODIFIED RESIDUE SEQADV 1U69 MSE C 143 UNP Q9I0C1 MET 143 MODIFIED RESIDUE SEQADV 1U69 MSE C 145 UNP Q9I0C1 MET 145 MODIFIED RESIDUE SEQADV 1U69 GLY C 160 UNP Q9I0C1 CLONING ARTIFACT SEQADV 1U69 SER C 161 UNP Q9I0C1 CLONING ARTIFACT SEQADV 1U69 GLY D -1 UNP Q9I0C1 CLONING ARTIFACT SEQADV 1U69 HIS D 0 UNP Q9I0C1 CLONING ARTIFACT SEQADV 1U69 MSE D 1 UNP Q9I0C1 MET 1 MODIFIED RESIDUE SEQADV 1U69 MSE D 57 UNP Q9I0C1 MET 57 MODIFIED RESIDUE SEQADV 1U69 MSE D 142 UNP Q9I0C1 MET 142 MODIFIED RESIDUE SEQADV 1U69 MSE D 143 UNP Q9I0C1 MET 143 MODIFIED RESIDUE SEQADV 1U69 MSE D 145 UNP Q9I0C1 MET 145 MODIFIED RESIDUE SEQADV 1U69 GLY D 160 UNP Q9I0C1 CLONING ARTIFACT SEQADV 1U69 SER D 161 UNP Q9I0C1 CLONING ARTIFACT SEQRES 1 A 163 GLY HIS MSE ASN SER LYS ASN THR ILE CYS LEU TRP TYR SEQRES 2 A 163 ASP SER ALA ALA LEU GLU ALA ALA THR PHE TYR ALA GLU SEQRES 3 A 163 THR PHE PRO ASP SER ALA VAL LEU ALA VAL HIS ARG ALA SEQRES 4 A 163 PRO GLY ASP TYR PRO SER GLY LYS GLU GLY ASP VAL LEU SEQRES 5 A 163 THR VAL GLU PHE ARG VAL MSE GLY ILE PRO CYS LEU GLY SEQRES 6 A 163 LEU ASN GLY GLY PRO ALA PHE ARG HIS SER GLU ALA PHE SEQRES 7 A 163 SER PHE GLN VAL ALA THR ASP ASP GLN ALA GLU THR ASP SEQRES 8 A 163 ARG LEU TRP ASN ALA ILE VAL ASP ASN GLY GLY GLU GLU SEQRES 9 A 163 SER ALA CYS GLY TRP CYS ARG ASP LYS TRP GLY ILE SER SEQRES 10 A 163 TRP GLN ILE THR PRO ARG VAL LEU SER GLU ALA ILE ALA SEQRES 11 A 163 SER PRO ASP ARG ALA ALA ALA ARG ARG ALA PHE GLU ALA SEQRES 12 A 163 MSE MSE THR MSE GLY ARG ILE ASP ILE ALA THR ILE GLU SEQRES 13 A 163 LYS ALA PHE LYS GLY GLY SER SEQRES 1 B 163 GLY HIS MSE ASN SER LYS ASN THR ILE CYS LEU TRP TYR SEQRES 2 B 163 ASP SER ALA ALA LEU GLU ALA ALA THR PHE TYR ALA GLU SEQRES 3 B 163 THR PHE PRO ASP SER ALA VAL LEU ALA VAL HIS ARG ALA SEQRES 4 B 163 PRO GLY ASP TYR PRO SER GLY LYS GLU GLY ASP VAL LEU SEQRES 5 B 163 THR VAL GLU PHE ARG VAL MSE GLY ILE PRO CYS LEU GLY SEQRES 6 B 163 LEU ASN GLY GLY PRO ALA PHE ARG HIS SER GLU ALA PHE SEQRES 7 B 163 SER PHE GLN VAL ALA THR ASP ASP GLN ALA GLU THR ASP SEQRES 8 B 163 ARG LEU TRP ASN ALA ILE VAL ASP ASN GLY GLY GLU GLU SEQRES 9 B 163 SER ALA CYS GLY TRP CYS ARG ASP LYS TRP GLY ILE SER SEQRES 10 B 163 TRP GLN ILE THR PRO ARG VAL LEU SER GLU ALA ILE ALA SEQRES 11 B 163 SER PRO ASP ARG ALA ALA ALA ARG ARG ALA PHE GLU ALA SEQRES 12 B 163 MSE MSE THR MSE GLY ARG ILE ASP ILE ALA THR ILE GLU SEQRES 13 B 163 LYS ALA PHE LYS GLY GLY SER SEQRES 1 C 163 GLY HIS MSE ASN SER LYS ASN THR ILE CYS LEU TRP TYR SEQRES 2 C 163 ASP SER ALA ALA LEU GLU ALA ALA THR PHE TYR ALA GLU SEQRES 3 C 163 THR PHE PRO ASP SER ALA VAL LEU ALA VAL HIS ARG ALA SEQRES 4 C 163 PRO GLY ASP TYR PRO SER GLY LYS GLU GLY ASP VAL LEU SEQRES 5 C 163 THR VAL GLU PHE ARG VAL MSE GLY ILE PRO CYS LEU GLY SEQRES 6 C 163 LEU ASN GLY GLY PRO ALA PHE ARG HIS SER GLU ALA PHE SEQRES 7 C 163 SER PHE GLN VAL ALA THR ASP ASP GLN ALA GLU THR ASP SEQRES 8 C 163 ARG LEU TRP ASN ALA ILE VAL ASP ASN GLY GLY GLU GLU SEQRES 9 C 163 SER ALA CYS GLY TRP CYS ARG ASP LYS TRP GLY ILE SER SEQRES 10 C 163 TRP GLN ILE THR PRO ARG VAL LEU SER GLU ALA ILE ALA SEQRES 11 C 163 SER PRO ASP ARG ALA ALA ALA ARG ARG ALA PHE GLU ALA SEQRES 12 C 163 MSE MSE THR MSE GLY ARG ILE ASP ILE ALA THR ILE GLU SEQRES 13 C 163 LYS ALA PHE LYS GLY GLY SER SEQRES 1 D 163 GLY HIS MSE ASN SER LYS ASN THR ILE CYS LEU TRP TYR SEQRES 2 D 163 ASP SER ALA ALA LEU GLU ALA ALA THR PHE TYR ALA GLU SEQRES 3 D 163 THR PHE PRO ASP SER ALA VAL LEU ALA VAL HIS ARG ALA SEQRES 4 D 163 PRO GLY ASP TYR PRO SER GLY LYS GLU GLY ASP VAL LEU SEQRES 5 D 163 THR VAL GLU PHE ARG VAL MSE GLY ILE PRO CYS LEU GLY SEQRES 6 D 163 LEU ASN GLY GLY PRO ALA PHE ARG HIS SER GLU ALA PHE SEQRES 7 D 163 SER PHE GLN VAL ALA THR ASP ASP GLN ALA GLU THR ASP SEQRES 8 D 163 ARG LEU TRP ASN ALA ILE VAL ASP ASN GLY GLY GLU GLU SEQRES 9 D 163 SER ALA CYS GLY TRP CYS ARG ASP LYS TRP GLY ILE SER SEQRES 10 D 163 TRP GLN ILE THR PRO ARG VAL LEU SER GLU ALA ILE ALA SEQRES 11 D 163 SER PRO ASP ARG ALA ALA ALA ARG ARG ALA PHE GLU ALA SEQRES 12 D 163 MSE MSE THR MSE GLY ARG ILE ASP ILE ALA THR ILE GLU SEQRES 13 D 163 LYS ALA PHE LYS GLY GLY SER MODRES 1U69 MSE A 57 MET SELENOMETHIONINE MODRES 1U69 MSE A 142 MET SELENOMETHIONINE MODRES 1U69 MSE A 143 MET SELENOMETHIONINE MODRES 1U69 MSE A 145 MET SELENOMETHIONINE MODRES 1U69 MSE B 57 MET SELENOMETHIONINE MODRES 1U69 MSE B 142 MET SELENOMETHIONINE MODRES 1U69 MSE B 143 MET SELENOMETHIONINE MODRES 1U69 MSE B 145 MET SELENOMETHIONINE MODRES 1U69 MSE C 57 MET SELENOMETHIONINE MODRES 1U69 MSE C 142 MET SELENOMETHIONINE MODRES 1U69 MSE C 143 MET SELENOMETHIONINE MODRES 1U69 MSE C 145 MET SELENOMETHIONINE MODRES 1U69 MSE D 57 MET SELENOMETHIONINE MODRES 1U69 MSE D 142 MET SELENOMETHIONINE MODRES 1U69 MSE D 143 MET SELENOMETHIONINE MODRES 1U69 MSE D 145 MET SELENOMETHIONINE HET MSE A 57 8 HET MSE A 142 8 HET MSE A 143 8 HET MSE A 145 8 HET MSE B 57 8 HET MSE B 142 8 HET MSE B 143 8 HET MSE B 145 8 HET MSE C 57 8 HET MSE C 142 8 HET MSE C 143 8 HET MSE C 145 8 HET MSE D 57 8 HET MSE D 142 8 HET MSE D 143 8 HET MSE D 145 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 5 HOH *544(H2 O) HELIX 1 1 ALA A 14 PHE A 26 1 13 HELIX 2 2 ASP A 84 ASN A 98 1 15 HELIX 3 3 ARG A 121 ALA A 128 1 8 HELIX 4 4 ASP A 131 MSE A 143 1 13 HELIX 5 5 ASP A 149 LYS A 158 1 10 HELIX 6 6 ALA B 14 PHE B 26 1 13 HELIX 7 7 ASP B 84 ASN B 98 1 15 HELIX 8 8 ARG B 121 ALA B 128 1 8 HELIX 9 9 ASP B 131 MSE B 143 1 13 HELIX 10 10 ASP B 149 LYS B 158 1 10 HELIX 11 11 ALA C 14 PHE C 26 1 13 HELIX 12 12 GLY C 67 PHE C 70 5 4 HELIX 13 13 ASP C 84 ASN C 98 1 15 HELIX 14 14 ARG C 121 ALA C 128 1 8 HELIX 15 15 ASP C 131 THR C 144 1 14 HELIX 16 16 ASP C 149 LYS C 158 1 10 HELIX 17 17 ALA D 14 PHE D 26 1 13 HELIX 18 18 ASP D 84 ASN D 98 1 15 HELIX 19 19 ARG D 121 ALA D 128 1 8 HELIX 20 20 ASP D 131 MSE D 143 1 13 HELIX 21 21 ASP D 149 LYS D 158 1 10 SHEET 1 A 8 SER A 29 ARG A 36 0 SHEET 2 A 8 VAL A 49 VAL A 56 -1 O THR A 51 N HIS A 35 SHEET 3 A 8 ILE A 59 ASN A 65 -1 O CYS A 61 N PHE A 54 SHEET 4 A 8 ASN A 5 TYR A 11 1 N TYR A 11 O LEU A 64 SHEET 5 A 8 PHE C 76 THR C 82 -1 O SER C 77 N CYS A 8 SHEET 6 A 8 SER C 115 PRO C 120 1 O GLN C 117 N VAL C 80 SHEET 7 A 8 TRP C 107 ARG C 109 -1 N CYS C 108 O TRP C 116 SHEET 8 A 8 GLU C 101 GLU C 102 -1 N GLU C 101 O ARG C 109 SHEET 1 B 8 GLU A 101 GLU A 102 0 SHEET 2 B 8 TRP A 107 ARG A 109 -1 O ARG A 109 N GLU A 101 SHEET 3 B 8 SER A 115 PRO A 120 -1 O TRP A 116 N CYS A 108 SHEET 4 B 8 PHE A 76 THR A 82 1 N VAL A 80 O GLN A 117 SHEET 5 B 8 ASN C 5 TYR C 11 -1 O CYS C 8 N SER A 77 SHEET 6 B 8 ILE C 59 ASN C 65 1 O LEU C 64 N TYR C 11 SHEET 7 B 8 VAL C 49 VAL C 56 -1 N PHE C 54 O CYS C 61 SHEET 8 B 8 ALA C 30 ARG C 36 -1 N HIS C 35 O THR C 51 SHEET 1 C 8 SER B 29 ARG B 36 0 SHEET 2 C 8 VAL B 49 VAL B 56 -1 O THR B 51 N HIS B 35 SHEET 3 C 8 ILE B 59 ASN B 65 -1 O CYS B 61 N PHE B 54 SHEET 4 C 8 ASN B 5 TYR B 11 1 N TYR B 11 O LEU B 64 SHEET 5 C 8 PHE D 76 THR D 82 -1 O SER D 77 N CYS B 8 SHEET 6 C 8 SER D 115 PRO D 120 1 O GLN D 117 N VAL D 80 SHEET 7 C 8 TRP D 107 ARG D 109 -1 N CYS D 108 O TRP D 116 SHEET 8 C 8 GLU D 101 GLU D 102 -1 N GLU D 101 O ARG D 109 SHEET 1 D 8 GLU B 101 GLU B 102 0 SHEET 2 D 8 TRP B 107 ARG B 109 -1 O ARG B 109 N GLU B 101 SHEET 3 D 8 SER B 115 PRO B 120 -1 O TRP B 116 N CYS B 108 SHEET 4 D 8 PHE B 76 THR B 82 1 N PHE B 78 O GLN B 117 SHEET 5 D 8 ASN D 5 TYR D 11 -1 O CYS D 8 N SER B 77 SHEET 6 D 8 ILE D 59 ASN D 65 1 O LEU D 64 N TYR D 11 SHEET 7 D 8 VAL D 49 VAL D 56 -1 N PHE D 54 O CYS D 61 SHEET 8 D 8 ALA D 30 ARG D 36 -1 N HIS D 35 O THR D 51 LINK C VAL A 56 N MSE A 57 1555 1555 1.33 LINK C MSE A 57 N GLY A 58 1555 1555 1.33 LINK C ALA A 141 N MSE A 142 1555 1555 1.33 LINK C MSE A 142 N MSE A 143 1555 1555 1.33 LINK C MSE A 143 N THR A 144 1555 1555 1.33 LINK C THR A 144 N MSE A 145 1555 1555 1.34 LINK C MSE A 145 N GLY A 146 1555 1555 1.33 LINK C VAL B 56 N MSE B 57 1555 1555 1.33 LINK C MSE B 57 N GLY B 58 1555 1555 1.32 LINK C ALA B 141 N MSE B 142 1555 1555 1.32 LINK C MSE B 142 N MSE B 143 1555 1555 1.33 LINK C MSE B 143 N THR B 144 1555 1555 1.33 LINK C THR B 144 N MSE B 145 1555 1555 1.34 LINK C MSE B 145 N GLY B 146 1555 1555 1.33 LINK C VAL C 56 N MSE C 57 1555 1555 1.33 LINK C MSE C 57 N GLY C 58 1555 1555 1.33 LINK C ALA C 141 N MSE C 142 1555 1555 1.33 LINK C MSE C 142 N MSE C 143 1555 1555 1.33 LINK C MSE C 143 N THR C 144 1555 1555 1.34 LINK C THR C 144 N MSE C 145 1555 1555 1.33 LINK C MSE C 145 N GLY C 146 1555 1555 1.33 LINK C VAL D 56 N MSE D 57 1555 1555 1.32 LINK C MSE D 57 N GLY D 58 1555 1555 1.33 LINK C ALA D 141 N MSE D 142 1555 1555 1.33 LINK C MSE D 142 N MSE D 143 1555 1555 1.33 LINK C MSE D 143 N THR D 144 1555 1555 1.33 LINK C THR D 144 N MSE D 145 1555 1555 1.33 LINK C MSE D 145 N GLY D 146 1555 1555 1.33 CRYST1 44.546 55.017 67.069 70.71 89.88 85.61 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022449 -0.001725 0.000557 0.00000 SCALE2 0.000000 0.018230 -0.006399 0.00000 SCALE3 0.000000 0.000000 0.015802 0.00000