HEADER UNKNOWN FUNCTION 30-JUL-04 1U6L TITLE CRYSTAL STRUCTURE OF PROTEIN PA1353 FROM PSEUDOMONAS AERUGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS HYPOTHETICAL PROTEIN, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 NYSGXRC, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR T.MIN,H.MU,L.SHAPIRO,S.K.BURLEY,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (NYSGXRC) REVDAT 7 03-FEB-21 1U6L 1 AUTHOR SEQADV LINK REVDAT 6 11-OCT-17 1U6L 1 REMARK REVDAT 5 13-JUL-11 1U6L 1 VERSN REVDAT 4 24-FEB-09 1U6L 1 VERSN REVDAT 3 22-MAR-05 1U6L 1 REMARK REVDAT 2 25-JAN-05 1U6L 1 AUTHOR KEYWDS REMARK REVDAT 1 14-DEC-04 1U6L 0 JRNL AUTH T.MIN,H.MU,L.SHAPIRO JRNL TITL THE CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN FROM JRNL TITL 2 PSEUDOMONAS AERUGINOSA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 9085 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 434 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.81 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.88 REMARK 3 REFLECTION IN BIN (WORKING SET) : 601 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.29 REMARK 3 BIN R VALUE (WORKING SET) : 0.3640 REMARK 3 BIN FREE R VALUE SET COUNT : 32 REMARK 3 BIN FREE R VALUE : 0.6720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1985 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 243 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.80000 REMARK 3 B22 (A**2) : -0.98000 REMARK 3 B33 (A**2) : -0.82000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.599 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.373 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.151 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.668 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.927 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.885 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2039 ; 0.031 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2763 ; 2.533 ; 1.940 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 262 ; 7.868 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 84 ;35.171 ;23.571 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 293 ;20.733 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;22.335 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 294 ; 0.155 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1574 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1106 ; 0.289 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1396 ; 0.350 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 157 ; 0.269 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 30 ; 0.411 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.374 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1360 ; 5.043 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2087 ; 7.178 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 816 ; 5.923 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 696 ; 8.599 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2176 ; 4.789 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 279 ; 8.692 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 1996 ; 5.148 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1U6L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-04. REMARK 100 THE DEPOSITION ID IS D_1000023309. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUN-04 REMARK 200 TEMPERATURE (KELVIN) : 70 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97900 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9121 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 6000, 1M LITHIUM CHLORIDE, REMARK 280 0.1M SODIUM ACETATE, PH 5.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.28950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.09650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.14700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 41.09650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.28950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.14700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAIN(S). THE BIOLOGICAL UNIT IS REMARK 300 UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 CYS A 42 REMARK 465 GLY A 43 REMARK 465 ASP A 44 REMARK 465 ILE A 45 REMARK 465 ARG A 139 REMARK 465 GLU A 140 REMARK 465 GLY A 141 REMARK 465 GLY A 142 REMARK 465 SER A 143 REMARK 465 HIS A 144 REMARK 465 HIS A 145 REMARK 465 HIS A 146 REMARK 465 HIS A 147 REMARK 465 HIS A 148 REMARK 465 HIS A 149 REMARK 465 MSE B 1 REMARK 465 CYS B 42 REMARK 465 GLY B 43 REMARK 465 ASP B 44 REMARK 465 ILE B 45 REMARK 465 ARG B 139 REMARK 465 GLU B 140 REMARK 465 GLY B 141 REMARK 465 GLY B 142 REMARK 465 SER B 143 REMARK 465 HIS B 144 REMARK 465 HIS B 145 REMARK 465 HIS B 146 REMARK 465 HIS B 147 REMARK 465 HIS B 148 REMARK 465 HIS B 149 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 48 CG OD1 OD2 REMARK 470 TRP A 49 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 49 CZ3 CH2 REMARK 470 ASP A 89 CG OD1 OD2 REMARK 470 GLU A 93 CD OE1 OE2 REMARK 470 GLN A 137 CG CD OE1 NE2 REMARK 470 ASP B 48 CG OD1 OD2 REMARK 470 TRP B 49 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 49 CZ3 CH2 REMARK 470 GLU B 77 CG CD OE1 OE2 REMARK 470 LYS B 91 CD CE NZ REMARK 470 GLU B 93 CG CD OE1 OE2 REMARK 470 GLU B 95 CG CD OE1 OE2 REMARK 470 GLU B 103 CG CD OE1 OE2 REMARK 470 SER B 119 OG REMARK 470 GLU B 136 CG CD OE1 OE2 REMARK 470 GLN B 137 CG CD OE1 NE2 REMARK 470 ASP B 138 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 199 O HOH B 204 1.87 REMARK 500 O HOH B 171 O HOH B 231 1.89 REMARK 500 NH1 ARG A 126 O HOH A 202 1.91 REMARK 500 O HOH A 212 O HOH A 217 2.06 REMARK 500 CB GLU A 103 O HOH A 201 2.12 REMARK 500 O ASP B 51 O HOH B 226 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 168 O HOH A 225 4455 1.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ALA A 130 CA ALA A 130 CB -0.130 REMARK 500 PHE B 19 CZ PHE B 19 CE2 0.128 REMARK 500 CYS B 21 CB CYS B 21 SG -0.104 REMARK 500 VAL B 59 CB VAL B 59 CG2 0.144 REMARK 500 VAL B 107 CB VAL B 107 CG1 0.129 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 125 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG B 16 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 THR B 114 N - CA - C ANGL. DEV. = -16.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 3 93.61 41.78 REMARK 500 ASN A 12 54.63 -99.16 REMARK 500 ASP A 38 32.71 -88.86 REMARK 500 PRO A 40 44.62 -85.37 REMARK 500 ALA A 47 165.23 53.85 REMARK 500 ASP A 48 -162.60 -101.19 REMARK 500 TRP A 49 81.10 -7.10 REMARK 500 LYS A 50 59.29 -162.17 REMARK 500 ASP A 51 48.87 -100.65 REMARK 500 LYS A 52 -171.53 -52.40 REMARK 500 PRO A 72 5.88 -63.25 REMARK 500 LYS A 80 -57.95 -130.44 REMARK 500 GLN A 137 -108.46 -65.24 REMARK 500 LEU B 3 110.67 41.21 REMARK 500 ASN B 12 65.86 -109.90 REMARK 500 ALA B 32 117.28 56.53 REMARK 500 MSE B 33 65.82 -150.88 REMARK 500 PRO B 40 36.80 -87.45 REMARK 500 ASP B 48 179.14 -56.21 REMARK 500 ASP B 51 70.30 -100.72 REMARK 500 LYS B 52 -164.04 -102.20 REMARK 500 LYS B 80 -71.13 -121.89 REMARK 500 CYS B 82 144.21 -171.39 REMARK 500 SER B 106 123.35 -173.68 REMARK 500 ARG B 126 -31.15 -31.10 REMARK 500 GLU B 136 29.24 -151.88 REMARK 500 GLN B 137 -93.03 -144.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 51 LYS A 52 149.74 REMARK 500 GLY B 81 CYS B 82 -148.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-T1794 RELATED DB: TARGETDB DBREF 1U6L A 4 139 UNP Q9I3Z1 Q9I3Z1_PSEAE 2 137 DBREF 1U6L B 4 139 UNP Q9I3Z1 Q9I3Z1_PSEAE 2 137 SEQADV 1U6L MSE A 1 UNP Q9I3Z1 CLONING ARTIFACT SEQADV 1U6L SER A 2 UNP Q9I3Z1 CLONING ARTIFACT SEQADV 1U6L LEU A 3 UNP Q9I3Z1 CLONING ARTIFACT SEQADV 1U6L MSE A 33 UNP Q9I3Z1 MET 31 MODIFIED RESIDUE SEQADV 1U6L MSE A 54 UNP Q9I3Z1 MET 52 MODIFIED RESIDUE SEQADV 1U6L MSE A 66 UNP Q9I3Z1 MET 64 MODIFIED RESIDUE SEQADV 1U6L MSE A 109 UNP Q9I3Z1 MET 107 MODIFIED RESIDUE SEQADV 1U6L MSE A 122 UNP Q9I3Z1 MET 120 MODIFIED RESIDUE SEQADV 1U6L MSE A 132 UNP Q9I3Z1 MET 130 MODIFIED RESIDUE SEQADV 1U6L GLU A 140 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L GLY A 141 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L GLY A 142 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L SER A 143 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L HIS A 144 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L HIS A 145 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L HIS A 146 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L HIS A 147 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L HIS A 148 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L HIS A 149 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L MSE B 1 UNP Q9I3Z1 CLONING ARTIFACT SEQADV 1U6L SER B 2 UNP Q9I3Z1 CLONING ARTIFACT SEQADV 1U6L LEU B 3 UNP Q9I3Z1 CLONING ARTIFACT SEQADV 1U6L MSE B 33 UNP Q9I3Z1 MET 31 MODIFIED RESIDUE SEQADV 1U6L MSE B 54 UNP Q9I3Z1 MET 52 MODIFIED RESIDUE SEQADV 1U6L MSE B 66 UNP Q9I3Z1 MET 64 MODIFIED RESIDUE SEQADV 1U6L MSE B 109 UNP Q9I3Z1 MET 107 MODIFIED RESIDUE SEQADV 1U6L MSE B 122 UNP Q9I3Z1 MET 120 MODIFIED RESIDUE SEQADV 1U6L MSE B 132 UNP Q9I3Z1 MET 130 MODIFIED RESIDUE SEQADV 1U6L GLU B 140 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L GLY B 141 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L GLY B 142 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L SER B 143 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L HIS B 144 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L HIS B 145 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L HIS B 146 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L HIS B 147 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L HIS B 148 UNP Q9I3Z1 EXPRESSION TAG SEQADV 1U6L HIS B 149 UNP Q9I3Z1 EXPRESSION TAG SEQRES 1 A 149 MSE SER LEU GLN ILE VAL PRO TYR LEU ILE PHE ASN GLY SEQRES 2 A 149 ASN CYS ARG GLU ALA PHE SER CYS TYR HIS GLN HIS LEU SEQRES 3 A 149 GLY GLY THR LEU GLU ALA MSE LEU PRO PHE GLY ASP SER SEQRES 4 A 149 PRO GLU CYS GLY ASP ILE PRO ALA ASP TRP LYS ASP LYS SEQRES 5 A 149 ILE MSE HIS ALA ARG LEU VAL VAL GLY SER PHE ALA LEU SEQRES 6 A 149 MSE ALA SER ASP ASN HIS PRO ALA TYR PRO TYR GLU GLY SEQRES 7 A 149 ILE LYS GLY CYS SER ILE SER LEU ASN VAL ASP SER LYS SEQRES 8 A 149 ALA GLU ALA GLU ARG LEU PHE ASN ALA LEU ALA GLU GLY SEQRES 9 A 149 GLY SER VAL GLN MSE PRO LEU GLY PRO THR PHE TRP ALA SEQRES 10 A 149 ALA SER PHE GLY MSE PHE THR ASP ARG PHE GLY VAL ALA SEQRES 11 A 149 TRP MSE VAL ASN CYS GLU GLN ASP ARG GLU GLY GLY SER SEQRES 12 A 149 HIS HIS HIS HIS HIS HIS SEQRES 1 B 149 MSE SER LEU GLN ILE VAL PRO TYR LEU ILE PHE ASN GLY SEQRES 2 B 149 ASN CYS ARG GLU ALA PHE SER CYS TYR HIS GLN HIS LEU SEQRES 3 B 149 GLY GLY THR LEU GLU ALA MSE LEU PRO PHE GLY ASP SER SEQRES 4 B 149 PRO GLU CYS GLY ASP ILE PRO ALA ASP TRP LYS ASP LYS SEQRES 5 B 149 ILE MSE HIS ALA ARG LEU VAL VAL GLY SER PHE ALA LEU SEQRES 6 B 149 MSE ALA SER ASP ASN HIS PRO ALA TYR PRO TYR GLU GLY SEQRES 7 B 149 ILE LYS GLY CYS SER ILE SER LEU ASN VAL ASP SER LYS SEQRES 8 B 149 ALA GLU ALA GLU ARG LEU PHE ASN ALA LEU ALA GLU GLY SEQRES 9 B 149 GLY SER VAL GLN MSE PRO LEU GLY PRO THR PHE TRP ALA SEQRES 10 B 149 ALA SER PHE GLY MSE PHE THR ASP ARG PHE GLY VAL ALA SEQRES 11 B 149 TRP MSE VAL ASN CYS GLU GLN ASP ARG GLU GLY GLY SER SEQRES 12 B 149 HIS HIS HIS HIS HIS HIS MODRES 1U6L MSE A 33 MET SELENOMETHIONINE MODRES 1U6L MSE A 54 MET SELENOMETHIONINE MODRES 1U6L MSE A 66 MET SELENOMETHIONINE MODRES 1U6L MSE A 109 MET SELENOMETHIONINE MODRES 1U6L MSE A 122 MET SELENOMETHIONINE MODRES 1U6L MSE A 132 MET SELENOMETHIONINE MODRES 1U6L MSE B 33 MET SELENOMETHIONINE MODRES 1U6L MSE B 54 MET SELENOMETHIONINE MODRES 1U6L MSE B 66 MET SELENOMETHIONINE MODRES 1U6L MSE B 109 MET SELENOMETHIONINE MODRES 1U6L MSE B 122 MET SELENOMETHIONINE MODRES 1U6L MSE B 132 MET SELENOMETHIONINE HET MSE A 33 8 HET MSE A 54 8 HET MSE A 66 8 HET MSE A 109 8 HET MSE A 122 8 HET MSE A 132 8 HET MSE B 33 8 HET MSE B 54 8 HET MSE B 66 8 HET MSE B 109 8 HET MSE B 122 8 HET MSE B 132 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 HOH *243(H2 O) HELIX 1 1 ASN A 14 GLY A 27 1 14 HELIX 2 2 SER A 90 GLU A 103 1 14 HELIX 3 3 ASN B 14 GLY B 27 1 14 HELIX 4 4 LYS B 91 GLU B 103 1 13 SHEET 1 A 8 THR A 29 PRO A 35 0 SHEET 2 A 8 ILE A 53 VAL A 60 -1 O VAL A 59 N THR A 29 SHEET 3 A 8 PHE A 63 ASP A 69 -1 O ASP A 69 N ILE A 53 SHEET 4 A 8 GLN A 4 PHE A 11 1 N LEU A 9 O MSE A 66 SHEET 5 A 8 CYS B 82 SER B 90 -1 O SER B 83 N TYR A 8 SHEET 6 A 8 ALA B 130 ASP B 138 1 O MSE B 132 N LEU B 86 SHEET 7 A 8 PHE B 120 THR B 124 -1 N GLY B 121 O VAL B 133 SHEET 8 A 8 SER B 106 MSE B 109 -1 N GLN B 108 O MSE B 122 SHEET 1 B 8 SER A 106 THR A 114 0 SHEET 2 B 8 ALA A 117 THR A 124 -1 O THR A 124 N SER A 106 SHEET 3 B 8 ALA A 130 CYS A 135 -1 O TRP A 131 N PHE A 123 SHEET 4 B 8 CYS A 82 ASN A 87 1 N LEU A 86 O MSE A 132 SHEET 5 B 8 GLN B 4 PHE B 11 -1 O TYR B 8 N SER A 83 SHEET 6 B 8 PHE B 63 ASP B 69 1 O MSE B 66 N LEU B 9 SHEET 7 B 8 ILE B 53 VAL B 60 -1 N LEU B 58 O LEU B 65 SHEET 8 B 8 THR B 29 PRO B 35 -1 N THR B 29 O VAL B 59 LINK C ALA A 32 N MSE A 33 1555 1555 1.30 LINK C MSE A 33 N LEU A 34 1555 1555 1.31 LINK C ILE A 53 N MSE A 54 1555 1555 1.33 LINK C MSE A 54 N HIS A 55 1555 1555 1.34 LINK C LEU A 65 N MSE A 66 1555 1555 1.33 LINK C MSE A 66 N ALA A 67 1555 1555 1.34 LINK C GLN A 108 N MSE A 109 1555 1555 1.34 LINK C MSE A 109 N PRO A 110 1555 1555 1.34 LINK C GLY A 121 N MSE A 122 1555 1555 1.35 LINK C MSE A 122 N PHE A 123 1555 1555 1.36 LINK C TRP A 131 N MSE A 132 1555 1555 1.34 LINK C MSE A 132 N VAL A 133 1555 1555 1.30 LINK C ALA B 32 N MSE B 33 1555 1555 1.35 LINK C MSE B 33 N LEU B 34 1555 1555 1.32 LINK C ILE B 53 N MSE B 54 1555 1555 1.34 LINK C MSE B 54 N HIS B 55 1555 1555 1.34 LINK C LEU B 65 N MSE B 66 1555 1555 1.32 LINK C MSE B 66 N ALA B 67 1555 1555 1.34 LINK C GLN B 108 N MSE B 109 1555 1555 1.32 LINK C MSE B 109 N PRO B 110 1555 1555 1.34 LINK C GLY B 121 N MSE B 122 1555 1555 1.33 LINK C MSE B 122 N PHE B 123 1555 1555 1.35 LINK C TRP B 131 N MSE B 132 1555 1555 1.33 LINK C MSE B 132 N VAL B 133 1555 1555 1.32 CRYST1 56.579 76.294 82.193 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017674 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013107 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012166 0.00000