HEADER TRANSCRIPTION 09-AUG-04 1U9G TITLE HETEROCYCLIC PEPTIDE BACKBONE MODIFICATION IN GCN4-PLI BASED COILED TITLE 2 COILS: REPLACEMENT OF K(8)L(9) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GENERAL CONTROL PROTEIN GCN4; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: AMINO ACID BIOSYNTHESIS REGULATORY PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: PREPARED BY FMOC SOLID PHASE PEPTIDE SYNTHESIS.THE SOURCE 4 SEQUENCE OF THIS PROTEIN CAN BE FOUND NATURALLY IN SACCHAROMYCES SOURCE 5 CEREVISIAE (BAKER'S YEAST). KEYWDS TETRAMERIC ALPHA-HELICAL COILED COIL WITH HETEEROCYCIC BACKBONE KEYWDS 2 MODIFICATION, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR W.S.HORNE,M.K.YADAV,C.D.STOUT,M.R.GHADIRI REVDAT 3 13-JUL-11 1U9G 1 VERSN REVDAT 2 24-FEB-09 1U9G 1 VERSN REVDAT 1 30-NOV-04 1U9G 0 JRNL AUTH W.S.HORNE,M.K.YADAV,C.D.STOUT,M.R.GHADIRI JRNL TITL HETEROCYCLIC PEPTIDE BACKBONE MODIFICATIONS IN AN JRNL TITL 2 ALPHA-HELICAL COILED COIL. JRNL REF J.AM.CHEM.SOC. V. 126 15366 2004 JRNL REFN ISSN 0002-7863 JRNL PMID 15563148 JRNL DOI 10.1021/JA0450408 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0003 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.17 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 4295 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.249 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.326 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 208 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 313 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.39 REMARK 3 BIN R VALUE (WORKING SET) : 0.2920 REMARK 3 BIN FREE R VALUE SET COUNT : 15 REMARK 3 BIN FREE R VALUE : 0.3200 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 363 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 19 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.206 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.219 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.162 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.689 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.882 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 371 ; 0.021 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 360 ; 0.030 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 501 ; 2.664 ; 2.083 REMARK 3 BOND ANGLES OTHERS (DEGREES): 829 ; 1.979 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 42 ; 7.456 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 15 ;40.236 ;26.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 67 ;17.793 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 1 ;13.195 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 61 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 381 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 60 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 86 ; 0.323 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 320 ; 0.189 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 159 ; 0.211 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 215 ; 0.103 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 9 ; 0.305 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.014 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 4 ; 0.234 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 32 ; 0.274 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.407 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 231 ; 1.783 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 98 ;10.153 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 350 ; 2.147 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 158 ; 3.229 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 151 ; 4.429 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1U9G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-AUG-04. REMARK 100 THE RCSB ID CODE IS RCSB023410. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-APR-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : OSMIC CONFOCAL MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR (MSC/RIGAKU) REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR (MSC/RIGAKU) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4526 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 45.170 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.03100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.32600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4 M LITHIUM SULFATE MONOHYDRATE, 12% REMARK 280 W/V PEG 8000, 20% V/V ANHYDROUS GLYCEROL, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.11400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.11400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.11400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 39.11400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.11400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.11400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 39.11400 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 39.11400 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 39.11400 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 39.11400 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 39.11400 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 39.11400 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 39.11400 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 39.11400 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 39.11400 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 39.11400 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 39.11400 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 39.11400 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 58.67100 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 19.55700 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 19.55700 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 58.67100 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 58.67100 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 58.67100 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 19.55700 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 19.55700 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 58.67100 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 19.55700 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 58.67100 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 19.55700 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 58.67100 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 19.55700 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 19.55700 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 19.55700 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 58.67100 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 19.55700 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 58.67100 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 58.67100 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 58.67100 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 19.55700 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 19.55700 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 58.67100 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 58.67100 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 19.55700 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 19.55700 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 19.55700 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 19.55700 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 58.67100 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 19.55700 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 58.67100 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 19.55700 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 58.67100 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 58.67100 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 58.67100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE TETRAMER FORMED BY CHAINS A AND B IS GENERATED BY THE REMARK 300 TWO FOLD AXIS: 3/4+Z,1/4+Y,1/4-X REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 4560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 19.55700 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 19.55700 REMARK 350 BIOMT3 2 1.000000 0.000000 0.000000 -19.55700 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -103.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 39.11400 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 39.11400 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 39.11400 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 -39.11400 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 19.55700 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 19.55700 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 -19.55700 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 19.55700 REMARK 350 BIOMT2 5 0.000000 0.000000 -1.000000 19.55700 REMARK 350 BIOMT3 5 0.000000 1.000000 0.000000 -19.55700 REMARK 350 BIOMT1 6 0.000000 0.000000 1.000000 19.55700 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 19.55700 REMARK 350 BIOMT3 6 1.000000 0.000000 0.000000 -19.55700 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -89.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -88.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 39.11400 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 39.11400 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 39.11400 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 -39.11400 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 38 LIES ON A SPECIAL POSITION. REMARK 375 O2 SO4 B 1 LIES ON A SPECIAL POSITION. REMARK 375 S SO4 B 1 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 2 REMARK 465 MET A 3 REMARK 465 LYS A 4 REMARK 465 GLN A 5 REMARK 465 ILE A 6 REMARK 465 GLU A 7 REMARK 465 ASP A 8 REMARK 465 GLY A 31 REMARK 465 GLU A 32 REMARK 465 ARG A 33 REMARK 465 ARG B 2 REMARK 465 MET B 3 REMARK 465 LYS B 4 REMARK 465 GLN B 5 REMARK 465 ILE B 6 REMARK 465 GLU B 7 REMARK 465 ASP B 8 REMARK 465 GLY B 31 REMARK 465 GLU B 32 REMARK 465 ARG B 33 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 25 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 27 CD CE NZ REMARK 470 LYS A 28 CG CD CE NZ REMARK 470 LEU A 29 CG CD1 CD2 REMARK 470 LYS B 27 CD CE NZ REMARK 470 LYS B 28 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 39 O HOH A 41 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 42 O HOH B 43 22554 1.99 REMARK 500 O HOH A 35 O HOH B 37 16545 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 27 -126.25 -57.19 REMARK 500 LYS A 28 -71.47 16.02 REMARK 500 LEU A 29 40.23 -61.55 REMARK 500 LEU B 29 -72.24 -49.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 TA4 A 9 89.2 L L OUTSIDE RANGE REMARK 500 TA4 B 9 50.5 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 43 DISTANCE = 6.07 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1U9F RELATED DB: PDB REMARK 900 RELATED ID: 1U9H RELATED DB: PDB DBREF 1U9G A 2 33 PDB 1U9G 1U9G 2 33 DBREF 1U9G B 2 33 PDB 1U9G 1U9G 2 33 SEQRES 1 A 32 ARG MET LYS GLN ILE GLU ASP TA4 GLU GLU ILE LEU SER SEQRES 2 A 32 LYS LEU TYR HIS ILE GLU ASN GLU LEU ALA ARG ILE LYS SEQRES 3 A 32 LYS LEU LEU GLY GLU ARG SEQRES 1 B 32 ARG MET LYS GLN ILE GLU ASP TA4 GLU GLU ILE LEU SER SEQRES 2 B 32 LYS LEU TYR HIS ILE GLU ASN GLU LEU ALA ARG ILE LYS SEQRES 3 B 32 LYS LEU LEU GLY GLU ARG HET TA4 A 9 14 HET TA4 B 9 14 HET SO4 B 1 5 HETNAM TA4 (S)-2-[4-(AMINOMETHYL)-1H-1,2,3-TRIAZOL-1-YL]-4- HETNAM 2 TA4 METHYLPENTANOIC ACID HETNAM SO4 SULFATE ION FORMUL 1 TA4 2(C9 H16 N4 O2) FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *19(H2 O) HELIX 1 1 TA4 A 9 LYS A 27 1 19 HELIX 2 2 TA4 B 9 LEU B 30 1 22 LINK C TA4 A 9 N GLU A 10 1555 1555 1.31 LINK C TA4 B 9 N GLU B 10 1555 1555 1.33 SITE 1 AC1 5 GLU A 11 LYS A 15 HOH A 36 HOH A 38 SITE 2 AC1 5 TYR B 17 CRYST1 78.228 78.228 78.228 90.00 90.00 90.00 P 41 3 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012783 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012783 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012783 0.00000 HETATM 1 O TA4 A 9 20.215 5.186 6.297 1.00 48.29 O HETATM 2 C TA4 A 9 20.625 5.198 7.461 1.00 49.62 C HETATM 3 CA TA4 A 9 21.967 5.807 7.899 1.00 53.34 C HETATM 4 CB TA4 A 9 22.451 6.855 6.933 1.00 53.80 C HETATM 5 CG TA4 A 9 23.819 7.437 7.298 1.00 55.98 C HETATM 6 CD2 TA4 A 9 24.421 7.981 6.025 1.00 56.70 C HETATM 7 CD1 TA4 A 9 23.793 8.576 8.320 1.00 58.98 C HETATM 8 NT1 TA4 A 9 22.905 4.680 7.851 1.00 54.53 N HETATM 9 CT5 TA4 A 9 23.048 3.887 6.754 1.00 58.09 C HETATM 10 CT4 TA4 A 9 23.942 2.897 7.006 1.00 58.19 C HETATM 11 NT3 TA4 A 9 24.361 3.092 8.307 1.00 60.07 N HETATM 12 NT2 TA4 A 9 23.724 4.175 8.830 1.00 56.92 N HETATM 13 CT6 TA4 A 9 24.379 1.811 6.005 1.00 58.48 C HETATM 14 N TA4 A 9 23.713 1.986 4.675 1.00 56.23 N