data_1U9Q # _entry.id 1U9Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1U9Q pdb_00001u9q 10.2210/pdb1u9q/pdb RCSB RCSB023420 ? ? WWPDB D_1000023420 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-03-29 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 1 4 2023-08-23 6 'Structure model' 1 5 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' 8 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_site 7 6 'Structure model' pdbx_entry_details 8 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 1U9Q _pdbx_database_status.status_code REL _pdbx_database_status.recvd_initial_deposition_date 2004-08-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry N _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1F2A . unspecified PDB 1F29 . unspecified PDB 1F2B . unspecified PDB 1F2C . unspecified PDB 1ME3 . unspecified PDB 1ME4 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lange, M.' 1 'Weston, S.G.' 2 'Cheng, H.' 3 'Culliane, M.' 4 'Fiorey, M.M.' 5 'Grisostomi, C.' 6 'Hardy, L.W.' 7 'Hartstough, D.S.' 8 'Pallai, P.V.' 9 'Tilton, R.F.' 10 'Baldino, C.M.' 11 'Brinen, L.S.' 12 'Engel, J.C.' 13 'Choe, Y.' 14 'Price, M.S.' 15 'Craik, C.S.' 16 # _citation.id primary _citation.title 'Development of alpha-keto-based inhibitors of cruzain, a cysteine protease implicated in Chagas disease' _citation.journal_abbrev Bioorg.Med.Chem. _citation.journal_volume 13 _citation.page_first 2141 _citation.page_last 2156 _citation.year 2005 _citation.journal_id_ASTM BMECEP _citation.country UK _citation.journal_id_ISSN 0968-0896 _citation.journal_id_CSD 1200 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15727867 _citation.pdbx_database_id_DOI 10.1016/j.bmc.2004.12.053 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Choe, Y.' 1 ? primary 'Brinen, L.S.' 2 ? primary 'Price, M.S.' 3 ? primary 'Engel, J.C.' 4 ? primary 'Lange, M.' 5 ? primary 'Grisostomi, C.' 6 ? primary 'Weston, S.G.' 7 ? primary 'Pallai, P.V.' 8 ? primary 'Cheng, H.' 9 ? primary 'Hardy, L.W.' 10 ? primary 'Hartsough, D.S.' 11 ? primary 'McMakin, M.' 12 ? primary 'Tilton, R.F.' 13 ? primary 'Baldino, C.M.' 14 ? primary 'Craik, C.S.' 15 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man cruzipain 22715.133 1 3.4.22.51 ? 'catalytic domain' ? 2 non-polymer syn '[1-(1-METHYL-4,5-DIOXO-PENT-2-ENYLCARBAMOYL)-2-PHENYL-ETHYL]-CARBAMIC ACID BENZYL ESTER' 408.447 1 ? ? ? ? 3 water nat water 18.015 104 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Major cysteine proteinase; Cruzaine' # _entity_name_sys.entity_id 1 _entity_name_sys.name E.C.3.4.22.51 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENN GAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCVSEQL DHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVVG ; _entity_poly.pdbx_seq_one_letter_code_can ;APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENN GAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCVSEQL DHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVVG ; _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '[1-(1-METHYL-4,5-DIOXO-PENT-2-ENYLCARBAMOYL)-2-PHENYL-ETHYL]-CARBAMIC ACID BENZYL ESTER' 186 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 PRO n 1 3 ALA n 1 4 ALA n 1 5 VAL n 1 6 ASP n 1 7 TRP n 1 8 ARG n 1 9 ALA n 1 10 ARG n 1 11 GLY n 1 12 ALA n 1 13 VAL n 1 14 THR n 1 15 ALA n 1 16 VAL n 1 17 LYS n 1 18 ASP n 1 19 GLN n 1 20 GLY n 1 21 GLN n 1 22 CYS n 1 23 GLY n 1 24 SER n 1 25 CYS n 1 26 TRP n 1 27 ALA n 1 28 PHE n 1 29 SER n 1 30 ALA n 1 31 ILE n 1 32 GLY n 1 33 ASN n 1 34 VAL n 1 35 GLU n 1 36 CYS n 1 37 GLN n 1 38 TRP n 1 39 PHE n 1 40 LEU n 1 41 ALA n 1 42 GLY n 1 43 HIS n 1 44 PRO n 1 45 LEU n 1 46 THR n 1 47 ASN n 1 48 LEU n 1 49 SER n 1 50 GLU n 1 51 GLN n 1 52 MET n 1 53 LEU n 1 54 VAL n 1 55 SER n 1 56 CYS n 1 57 ASP n 1 58 LYS n 1 59 THR n 1 60 ASP n 1 61 SER n 1 62 GLY n 1 63 CYS n 1 64 SER n 1 65 GLY n 1 66 GLY n 1 67 LEU n 1 68 MET n 1 69 ASN n 1 70 ASN n 1 71 ALA n 1 72 PHE n 1 73 GLU n 1 74 TRP n 1 75 ILE n 1 76 VAL n 1 77 GLN n 1 78 GLU n 1 79 ASN n 1 80 ASN n 1 81 GLY n 1 82 ALA n 1 83 VAL n 1 84 TYR n 1 85 THR n 1 86 GLU n 1 87 ASP n 1 88 SER n 1 89 TYR n 1 90 PRO n 1 91 TYR n 1 92 ALA n 1 93 SER n 1 94 GLY n 1 95 GLU n 1 96 GLY n 1 97 ILE n 1 98 SER n 1 99 PRO n 1 100 PRO n 1 101 CYS n 1 102 THR n 1 103 THR n 1 104 SER n 1 105 GLY n 1 106 HIS n 1 107 THR n 1 108 VAL n 1 109 GLY n 1 110 ALA n 1 111 THR n 1 112 ILE n 1 113 THR n 1 114 GLY n 1 115 HIS n 1 116 VAL n 1 117 GLU n 1 118 LEU n 1 119 PRO n 1 120 GLN n 1 121 ASP n 1 122 GLU n 1 123 ALA n 1 124 GLN n 1 125 ILE n 1 126 ALA n 1 127 ALA n 1 128 TRP n 1 129 LEU n 1 130 ALA n 1 131 VAL n 1 132 ASN n 1 133 GLY n 1 134 PRO n 1 135 VAL n 1 136 ALA n 1 137 VAL n 1 138 ALA n 1 139 VAL n 1 140 ASP n 1 141 ALA n 1 142 SER n 1 143 SER n 1 144 TRP n 1 145 MET n 1 146 THR n 1 147 TYR n 1 148 THR n 1 149 GLY n 1 150 GLY n 1 151 VAL n 1 152 MET n 1 153 THR n 1 154 SER n 1 155 CYS n 1 156 VAL n 1 157 SER n 1 158 GLU n 1 159 GLN n 1 160 LEU n 1 161 ASP n 1 162 HIS n 1 163 GLY n 1 164 VAL n 1 165 LEU n 1 166 LEU n 1 167 VAL n 1 168 GLY n 1 169 TYR n 1 170 ASN n 1 171 ASP n 1 172 SER n 1 173 ALA n 1 174 ALA n 1 175 VAL n 1 176 PRO n 1 177 TYR n 1 178 TRP n 1 179 ILE n 1 180 ILE n 1 181 LYS n 1 182 ASN n 1 183 SER n 1 184 TRP n 1 185 THR n 1 186 THR n 1 187 GLN n 1 188 TRP n 1 189 GLY n 1 190 GLU n 1 191 GLU n 1 192 GLY n 1 193 TYR n 1 194 ILE n 1 195 ARG n 1 196 ILE n 1 197 ALA n 1 198 LYS n 1 199 GLY n 1 200 SER n 1 201 ASN n 1 202 GLN n 1 203 CYS n 1 204 LEU n 1 205 VAL n 1 206 LYS n 1 207 GLU n 1 208 GLU n 1 209 ALA n 1 210 SER n 1 211 SER n 1 212 ALA n 1 213 VAL n 1 214 VAL n 1 215 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Trypanosoma _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Trypanosoma cruzi' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5693 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name DH5ALPHA _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 186 non-polymer . '[1-(1-METHYL-4,5-DIOXO-PENT-2-ENYLCARBAMOYL)-2-PHENYL-ETHYL]-CARBAMIC ACID BENZYL ESTER' ? 'C23 H24 N2 O5' 408.447 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA X . n A 1 2 PRO 2 2 2 PRO PRO X . n A 1 3 ALA 3 3 3 ALA ALA X . n A 1 4 ALA 4 4 4 ALA ALA X . n A 1 5 VAL 5 5 5 VAL VAL X . n A 1 6 ASP 6 6 6 ASP ASP X . n A 1 7 TRP 7 7 7 TRP TRP X . n A 1 8 ARG 8 8 8 ARG ARG X . n A 1 9 ALA 9 9 9 ALA ALA X . n A 1 10 ARG 10 10 10 ARG ARG X . n A 1 11 GLY 11 11 11 GLY GLY X . n A 1 12 ALA 12 12 12 ALA ALA X . n A 1 13 VAL 13 13 13 VAL VAL X . n A 1 14 THR 14 14 14 THR THR X . n A 1 15 ALA 15 15 15 ALA ALA X . n A 1 16 VAL 16 16 16 VAL VAL X . n A 1 17 LYS 17 17 17 LYS LYS X . n A 1 18 ASP 18 18 18 ASP ASP X . n A 1 19 GLN 19 19 19 GLN GLN X . n A 1 20 GLY 20 20 20 GLY GLY X . n A 1 21 GLN 21 21 21 GLN GLN X . n A 1 22 CYS 22 22 22 CYS CYS X . n A 1 23 GLY 23 23 23 GLY GLY X . n A 1 24 SER 24 24 24 SER SER X . n A 1 25 CYS 25 25 25 CYS CYS X . n A 1 26 TRP 26 26 26 TRP TRP X . n A 1 27 ALA 27 27 27 ALA ALA X . n A 1 28 PHE 28 28 28 PHE PHE X . n A 1 29 SER 29 29 29 SER SER X . n A 1 30 ALA 30 30 30 ALA ALA X . n A 1 31 ILE 31 31 31 ILE ILE X . n A 1 32 GLY 32 32 32 GLY GLY X . n A 1 33 ASN 33 33 33 ASN ASN X . n A 1 34 VAL 34 34 34 VAL VAL X . n A 1 35 GLU 35 35 35 GLU GLU X . n A 1 36 CYS 36 36 36 CYS CYS X . n A 1 37 GLN 37 37 37 GLN GLN X . n A 1 38 TRP 38 38 38 TRP TRP X . n A 1 39 PHE 39 39 39 PHE PHE X . n A 1 40 LEU 40 40 40 LEU LEU X . n A 1 41 ALA 41 41 41 ALA ALA X . n A 1 42 GLY 42 42 42 GLY GLY X . n A 1 43 HIS 43 43 43 HIS HIS X . n A 1 44 PRO 44 44 44 PRO PRO X . n A 1 45 LEU 45 45 45 LEU LEU X . n A 1 46 THR 46 46 46 THR THR X . n A 1 47 ASN 47 47 47 ASN ASN X . n A 1 48 LEU 48 48 48 LEU LEU X . n A 1 49 SER 49 49 49 SER SER X . n A 1 50 GLU 50 50 50 GLU GLU X . n A 1 51 GLN 51 51 51 GLN GLN X . n A 1 52 MET 52 52 52 MET MET X . n A 1 53 LEU 53 53 53 LEU LEU X . n A 1 54 VAL 54 54 54 VAL VAL X . n A 1 55 SER 55 55 55 SER SER X . n A 1 56 CYS 56 56 56 CYS CYS X . n A 1 57 ASP 57 57 57 ASP ASP X . n A 1 58 LYS 58 58 58 LYS LYS X . n A 1 59 THR 59 59 59 THR THR X . n A 1 60 ASP 60 60 60 ASP ASP X . n A 1 61 SER 61 61 61 SER SER X . n A 1 62 GLY 62 62 62 GLY GLY X . n A 1 63 CYS 63 63 63 CYS CYS X . n A 1 64 SER 64 64 64 SER SER X . n A 1 65 GLY 65 65 65 GLY GLY X . n A 1 66 GLY 66 66 66 GLY GLY X . n A 1 67 LEU 67 67 67 LEU LEU X . n A 1 68 MET 68 68 68 MET MET X . n A 1 69 ASN 69 69 69 ASN ASN X . n A 1 70 ASN 70 70 70 ASN ASN X . n A 1 71 ALA 71 71 71 ALA ALA X . n A 1 72 PHE 72 72 72 PHE PHE X . n A 1 73 GLU 73 73 73 GLU GLU X . n A 1 74 TRP 74 74 74 TRP TRP X . n A 1 75 ILE 75 75 75 ILE ILE X . n A 1 76 VAL 76 76 76 VAL VAL X . n A 1 77 GLN 77 77 77 GLN GLN X . n A 1 78 GLU 78 78 78 GLU GLU X . n A 1 79 ASN 79 78 78 ASN ASN X A n A 1 80 ASN 80 78 78 ASN ASN X B n A 1 81 GLY 81 78 78 GLY GLY X C n A 1 82 ALA 82 79 79 ALA ALA X . n A 1 83 VAL 83 80 80 VAL VAL X . n A 1 84 TYR 84 81 81 TYR TYR X . n A 1 85 THR 85 82 82 THR THR X . n A 1 86 GLU 86 83 83 GLU GLU X . n A 1 87 ASP 87 84 84 ASP ASP X . n A 1 88 SER 88 85 85 SER SER X . n A 1 89 TYR 89 86 86 TYR TYR X . n A 1 90 PRO 90 87 87 PRO PRO X . n A 1 91 TYR 91 88 88 TYR TYR X . n A 1 92 ALA 92 89 89 ALA ALA X . n A 1 93 SER 93 89 89 SER SER X A n A 1 94 GLY 94 89 89 GLY GLY X B n A 1 95 GLU 95 89 89 GLU GLU X C n A 1 96 GLY 96 90 90 GLY GLY X . n A 1 97 ILE 97 91 91 ILE ILE X . n A 1 98 SER 98 92 92 SER SER X . n A 1 99 PRO 99 93 93 PRO PRO X . n A 1 100 PRO 100 94 94 PRO PRO X . n A 1 101 CYS 101 95 95 CYS CYS X . n A 1 102 THR 102 96 96 THR THR X . n A 1 103 THR 103 97 97 THR THR X . n A 1 104 SER 104 98 98 SER SER X . n A 1 105 GLY 105 99 99 GLY GLY X . n A 1 106 HIS 106 100 100 HIS HIS X . n A 1 107 THR 107 101 101 THR THR X . n A 1 108 VAL 108 102 102 VAL VAL X . n A 1 109 GLY 109 103 103 GLY GLY X . n A 1 110 ALA 110 105 105 ALA ALA X . n A 1 111 THR 111 106 106 THR THR X . n A 1 112 ILE 112 107 107 ILE ILE X . n A 1 113 THR 113 108 108 THR THR X . n A 1 114 GLY 114 109 109 GLY GLY X . n A 1 115 HIS 115 110 110 HIS HIS X . n A 1 116 VAL 116 111 111 VAL VAL X . n A 1 117 GLU 117 112 112 GLU GLU X . n A 1 118 LEU 118 113 113 LEU LEU X . n A 1 119 PRO 119 114 114 PRO PRO X . n A 1 120 GLN 120 115 115 GLN GLN X . n A 1 121 ASP 121 116 116 ASP ASP X . n A 1 122 GLU 122 117 117 GLU GLU X . n A 1 123 ALA 123 118 118 ALA ALA X . n A 1 124 GLN 124 119 119 GLN GLN X . n A 1 125 ILE 125 120 120 ILE ILE X . n A 1 126 ALA 126 121 121 ALA ALA X . n A 1 127 ALA 127 122 122 ALA ALA X . n A 1 128 TRP 128 123 123 TRP TRP X . n A 1 129 LEU 129 124 124 LEU LEU X . n A 1 130 ALA 130 125 125 ALA ALA X . n A 1 131 VAL 131 126 126 VAL VAL X . n A 1 132 ASN 132 127 127 ASN ASN X . n A 1 133 GLY 133 128 128 GLY GLY X . n A 1 134 PRO 134 129 129 PRO PRO X . n A 1 135 VAL 135 130 130 VAL VAL X . n A 1 136 ALA 136 131 131 ALA ALA X . n A 1 137 VAL 137 132 132 VAL VAL X . n A 1 138 ALA 138 133 133 ALA ALA X . n A 1 139 VAL 139 134 134 VAL VAL X . n A 1 140 ASP 140 135 135 ASP ASP X . n A 1 141 ALA 141 136 136 ALA ALA X . n A 1 142 SER 142 139 139 SER SER X . n A 1 143 SER 143 140 140 SER SER X . n A 1 144 TRP 144 141 141 TRP TRP X . n A 1 145 MET 145 142 142 MET MET X . n A 1 146 THR 146 143 143 THR THR X . n A 1 147 TYR 147 144 144 TYR TYR X . n A 1 148 THR 148 145 145 THR THR X . n A 1 149 GLY 149 146 146 GLY GLY X . n A 1 150 GLY 150 147 147 GLY GLY X . n A 1 151 VAL 151 148 148 VAL VAL X . n A 1 152 MET 152 149 149 MET MET X . n A 1 153 THR 153 151 151 THR THR X . n A 1 154 SER 154 152 152 SER SER X . n A 1 155 CYS 155 153 153 CYS CYS X . n A 1 156 VAL 156 154 154 VAL VAL X . n A 1 157 SER 157 155 155 SER SER X . n A 1 158 GLU 158 156 156 GLU GLU X . n A 1 159 GLN 159 156 156 GLN GLN X A n A 1 160 LEU 160 157 157 LEU LEU X . n A 1 161 ASP 161 158 158 ASP ASP X . n A 1 162 HIS 162 159 159 HIS HIS X . n A 1 163 GLY 163 160 160 GLY GLY X . n A 1 164 VAL 164 161 161 VAL VAL X . n A 1 165 LEU 165 162 162 LEU LEU X . n A 1 166 LEU 166 163 163 LEU LEU X . n A 1 167 VAL 167 164 164 VAL VAL X . n A 1 168 GLY 168 165 165 GLY GLY X . n A 1 169 TYR 169 166 166 TYR TYR X . n A 1 170 ASN 170 167 167 ASN ASN X . n A 1 171 ASP 171 167 167 ASP ASP X A n A 1 172 SER 172 167 167 SER SER X B n A 1 173 ALA 173 167 167 ALA ALA X C n A 1 174 ALA 174 167 167 ALA ALA X D n A 1 175 VAL 175 168 168 VAL VAL X . n A 1 176 PRO 176 169 169 PRO PRO X . n A 1 177 TYR 177 170 170 TYR TYR X . n A 1 178 TRP 178 171 171 TRP TRP X . n A 1 179 ILE 179 172 172 ILE ILE X . n A 1 180 ILE 180 173 173 ILE ILE X . n A 1 181 LYS 181 174 174 LYS LYS X . n A 1 182 ASN 182 175 175 ASN ASN X . n A 1 183 SER 183 176 176 SER SER X . n A 1 184 TRP 184 177 177 TRP TRP X . n A 1 185 THR 185 178 178 THR THR X . n A 1 186 THR 186 179 179 THR THR X . n A 1 187 GLN 187 180 180 GLN GLN X . n A 1 188 TRP 188 181 181 TRP TRP X . n A 1 189 GLY 189 182 182 GLY GLY X . n A 1 190 GLU 190 183 183 GLU GLU X . n A 1 191 GLU 191 184 184 GLU GLU X . n A 1 192 GLY 192 185 185 GLY GLY X . n A 1 193 TYR 193 186 186 TYR TYR X . n A 1 194 ILE 194 187 187 ILE ILE X . n A 1 195 ARG 195 188 188 ARG ARG X . n A 1 196 ILE 196 189 189 ILE ILE X . n A 1 197 ALA 197 190 190 ALA ALA X . n A 1 198 LYS 198 191 191 LYS LYS X . n A 1 199 GLY 199 192 192 GLY GLY X . n A 1 200 SER 200 193 193 SER SER X . n A 1 201 ASN 201 198 198 ASN ASN X . n A 1 202 GLN 202 199 199 GLN GLN X . n A 1 203 CYS 203 200 200 CYS CYS X . n A 1 204 LEU 204 201 201 LEU LEU X . n A 1 205 VAL 205 202 202 VAL VAL X . n A 1 206 LYS 206 203 203 LYS LYS X . n A 1 207 GLU 207 204 204 GLU GLU X . n A 1 208 GLU 208 205 205 GLU GLU X . n A 1 209 ALA 209 206 206 ALA ALA X . n A 1 210 SER 210 207 207 SER SER X . n A 1 211 SER 211 208 208 SER SER X . n A 1 212 ALA 212 209 209 ALA ALA X . n A 1 213 VAL 213 210 210 VAL VAL X . n A 1 214 VAL 214 211 211 VAL VAL X . n A 1 215 GLY 215 212 212 GLY GLY X . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 186 1 300 300 186 186 X . C 3 HOH 1 301 1 HOH HOH X . C 3 HOH 2 302 2 HOH HOH X . C 3 HOH 3 303 3 HOH HOH X . C 3 HOH 4 304 4 HOH HOH X . C 3 HOH 5 305 5 HOH HOH X . C 3 HOH 6 306 6 HOH HOH X . C 3 HOH 7 307 7 HOH HOH X . C 3 HOH 8 308 8 HOH HOH X . C 3 HOH 9 309 9 HOH HOH X . C 3 HOH 10 310 10 HOH HOH X . C 3 HOH 11 311 11 HOH HOH X . C 3 HOH 12 312 12 HOH HOH X . C 3 HOH 13 313 13 HOH HOH X . C 3 HOH 14 314 14 HOH HOH X . C 3 HOH 15 315 15 HOH HOH X . C 3 HOH 16 316 16 HOH HOH X . C 3 HOH 17 317 17 HOH HOH X . C 3 HOH 18 318 18 HOH HOH X . C 3 HOH 19 319 19 HOH HOH X . C 3 HOH 20 320 20 HOH HOH X . C 3 HOH 21 321 21 HOH HOH X . C 3 HOH 22 322 22 HOH HOH X . C 3 HOH 23 323 23 HOH HOH X . C 3 HOH 24 324 24 HOH HOH X . C 3 HOH 25 325 25 HOH HOH X . C 3 HOH 26 326 26 HOH HOH X . C 3 HOH 27 327 27 HOH HOH X . C 3 HOH 28 328 28 HOH HOH X . C 3 HOH 29 329 29 HOH HOH X . C 3 HOH 30 330 30 HOH HOH X . C 3 HOH 31 331 31 HOH HOH X . C 3 HOH 32 332 32 HOH HOH X . C 3 HOH 33 333 33 HOH HOH X . C 3 HOH 34 334 34 HOH HOH X . C 3 HOH 35 335 35 HOH HOH X . C 3 HOH 36 336 36 HOH HOH X . C 3 HOH 37 337 37 HOH HOH X . C 3 HOH 38 338 38 HOH HOH X . C 3 HOH 39 339 39 HOH HOH X . C 3 HOH 40 340 40 HOH HOH X . C 3 HOH 41 341 41 HOH HOH X . C 3 HOH 42 342 42 HOH HOH X . C 3 HOH 43 343 43 HOH HOH X . C 3 HOH 44 344 44 HOH HOH X . C 3 HOH 45 345 45 HOH HOH X . C 3 HOH 46 346 46 HOH HOH X . C 3 HOH 47 347 47 HOH HOH X . C 3 HOH 48 348 48 HOH HOH X . C 3 HOH 49 349 49 HOH HOH X . C 3 HOH 50 350 50 HOH HOH X . C 3 HOH 51 351 51 HOH HOH X . C 3 HOH 52 352 52 HOH HOH X . C 3 HOH 53 353 53 HOH HOH X . C 3 HOH 54 354 54 HOH HOH X . C 3 HOH 55 355 55 HOH HOH X . C 3 HOH 56 356 56 HOH HOH X . C 3 HOH 57 357 57 HOH HOH X . C 3 HOH 58 358 58 HOH HOH X . C 3 HOH 59 359 59 HOH HOH X . C 3 HOH 60 360 60 HOH HOH X . C 3 HOH 61 361 61 HOH HOH X . C 3 HOH 62 362 62 HOH HOH X . C 3 HOH 63 363 63 HOH HOH X . C 3 HOH 64 364 64 HOH HOH X . C 3 HOH 65 365 65 HOH HOH X . C 3 HOH 66 366 66 HOH HOH X . C 3 HOH 67 367 67 HOH HOH X . C 3 HOH 68 368 69 HOH HOH X . C 3 HOH 69 369 70 HOH HOH X . C 3 HOH 70 370 71 HOH HOH X . C 3 HOH 71 371 72 HOH HOH X . C 3 HOH 72 372 73 HOH HOH X . C 3 HOH 73 373 74 HOH HOH X . C 3 HOH 74 374 75 HOH HOH X . C 3 HOH 75 375 76 HOH HOH X . C 3 HOH 76 376 77 HOH HOH X . C 3 HOH 77 377 78 HOH HOH X . C 3 HOH 78 378 79 HOH HOH X . C 3 HOH 79 379 80 HOH HOH X . C 3 HOH 80 380 81 HOH HOH X . C 3 HOH 81 381 82 HOH HOH X . C 3 HOH 82 382 83 HOH HOH X . C 3 HOH 83 383 84 HOH HOH X . C 3 HOH 84 384 85 HOH HOH X . C 3 HOH 85 385 86 HOH HOH X . C 3 HOH 86 386 87 HOH HOH X . C 3 HOH 87 387 88 HOH HOH X . C 3 HOH 88 388 89 HOH HOH X . C 3 HOH 89 389 90 HOH HOH X . C 3 HOH 90 390 91 HOH HOH X . C 3 HOH 91 391 92 HOH HOH X . C 3 HOH 92 392 93 HOH HOH X . C 3 HOH 93 393 94 HOH HOH X . C 3 HOH 94 394 95 HOH HOH X . C 3 HOH 95 395 96 HOH HOH X . C 3 HOH 96 396 97 HOH HOH X . C 3 HOH 97 397 98 HOH HOH X . C 3 HOH 98 398 99 HOH HOH X . C 3 HOH 99 399 100 HOH HOH X . C 3 HOH 100 400 101 HOH HOH X . C 3 HOH 101 401 103 HOH HOH X . C 3 HOH 102 402 104 HOH HOH X . C 3 HOH 103 403 105 HOH HOH X . C 3 HOH 104 404 106 HOH HOH X . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SCALEPACK 'data scaling' . ? 1 X-PLOR 'model building' . ? 2 REFMAC refinement 5.2 ? 3 X-PLOR phasing . ? 4 # _cell.entry_id 1U9Q _cell.length_a 45.720 _cell.length_b 50.675 _cell.length_c 45.576 _cell.angle_alpha 90.00 _cell.angle_beta 116.74 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1U9Q _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.cell_setting monoclinic _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1U9Q _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.96 _exptl_crystal.density_percent_sol 36.7 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details '0.6-1M NaCitrate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS II' _diffrn_detector.pdbx_collection_date 2000-03-15 _diffrn_detector.details 'Yale MSC mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Yale MSC Mirrors' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU300' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1U9Q _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 40.82 _reflns.d_resolution_high 2.30 _reflns.number_obs 7826 _reflns.number_all 7826 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs 0.092 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.37 _reflns_shell.percent_possible_all 88.2 _reflns_shell.Rmerge_I_obs 0.207 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 2.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1U9Q _refine.ls_number_reflns_obs 7457 _refine.ls_number_reflns_all 7826 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.82 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 93.32 _refine.ls_R_factor_obs 0.13627 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.13224 _refine.ls_R_factor_R_free 0.21773 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.6 _refine.ls_number_reflns_R_free 363 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.911 _refine.B_iso_mean 14.744 _refine.aniso_B[1][1] 0.05 _refine.aniso_B[2][2] 0.09 _refine.aniso_B[3][3] -0.78 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.73 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'cruzipain coordinate set 1AIM, without inhibitor or water molecules' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.559 _refine.pdbx_overall_ESU_R_Free 0.250 _refine.overall_SU_ML 0.165 _refine.overall_SU_B 6.854 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1592 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 104 _refine_hist.number_atoms_total 1726 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 40.82 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.020 0.021 ? 1661 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.876 1.931 ? 2265 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.616 5.000 ? 210 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 43.413 25.735 ? 68 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.443 15.000 ? 231 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.529 15.000 ? 3 'X-RAY DIFFRACTION' ? r_chiral_restr 0.109 0.200 ? 249 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.020 ? 1278 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.276 0.200 ? 732 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.314 0.200 ? 1125 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.186 0.200 ? 94 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.273 0.200 ? 27 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.177 0.200 ? 9 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.988 1.500 ? 1071 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.599 2.000 ? 1679 'X-RAY DIFFRACTION' ? r_scbond_it 2.669 3.000 ? 697 'X-RAY DIFFRACTION' ? r_scangle_it 4.223 4.500 ? 586 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.360 _refine_ls_shell.number_reflns_R_work 508 _refine_ls_shell.R_factor_R_work 0.168 _refine_ls_shell.percent_reflns_obs 87.75 _refine_ls_shell.R_factor_R_free 0.296 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 15 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1U9Q _struct.title 'Crystal structure of cruzain bound to an alpha-ketoester' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1U9Q _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'Clan-CA cysteine protease; covalent inhibitor, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name UNP _struct_ref.db_code CYSP_TRYCR _struct_ref.pdbx_db_accession P25779 _struct_ref.pdbx_align_begin 123 _struct_ref.pdbx_seq_one_letter_code ;APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENN GAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCVSEQL DHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVVG ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1U9Q _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 215 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P25779 _struct_ref_seq.db_align_beg 123 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 337 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 212 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 8 ? GLY A 11 ? ARG X 8 GLY X 11 5 ? 4 HELX_P HELX_P2 2 SER A 24 ? ALA A 41 ? SER X 24 ALA X 41 1 ? 18 HELX_P HELX_P3 3 SER A 49 ? ASP A 57 ? SER X 49 ASP X 57 1 ? 9 HELX_P HELX_P4 4 SER A 61 ? GLY A 65 ? SER X 61 GLY X 65 5 ? 5 HELX_P HELX_P5 5 LEU A 67 ? ASN A 79 A LEU X 67 ASN X 78 1 ? 13 HELX_P HELX_P6 6 ASP A 121 ? GLY A 133 ? ASP X 116 GLY X 128 1 ? 13 HELX_P HELX_P7 7 SER A 143 ? TYR A 147 ? SER X 140 TYR X 144 5 ? 5 HELX_P HELX_P8 8 ASN A 201 ? VAL A 205 ? ASN X 198 VAL X 202 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 63 SG ? ? X CYS 22 X CYS 63 1_555 ? ? ? ? ? ? ? 2.001 ? ? disulf2 disulf ? ? A CYS 56 SG ? ? ? 1_555 A CYS 101 SG ? ? X CYS 56 X CYS 95 1_555 ? ? ? ? ? ? ? 2.016 ? ? disulf3 disulf ? ? A CYS 155 SG ? ? ? 1_555 A CYS 203 SG ? ? X CYS 153 X CYS 200 1_555 ? ? ? ? ? ? ? 2.063 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 22 ? CYS A 63 ? CYS X 22 ? 1_555 CYS X 63 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 56 ? CYS A 101 ? CYS X 56 ? 1_555 CYS X 95 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 155 ? CYS A 203 ? CYS X 153 ? 1_555 CYS X 200 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? C ? 2 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 4 ? ASP A 6 ? ALA X 4 ASP X 6 A 2 HIS A 162 ? ASN A 170 ? HIS X 159 ASN X 167 A 3 VAL A 135 ? VAL A 139 ? VAL X 130 VAL X 134 B 1 ALA A 4 ? ASP A 6 ? ALA X 4 ASP X 6 B 2 HIS A 162 ? ASN A 170 ? HIS X 159 ASN X 167 B 3 TYR A 177 ? LYS A 181 ? TYR X 170 LYS X 174 B 4 TYR A 193 ? ALA A 197 ? TYR X 186 ALA X 190 B 5 VAL A 151 ? MET A 152 ? VAL X 148 MET X 149 C 1 ALA A 82 ? TYR A 84 ? ALA X 79 TYR X 81 C 2 VAL A 108 ? THR A 111 ? VAL X 102 THR X 106 D 1 GLY A 114 ? GLU A 117 ? GLY X 109 GLU X 112 D 2 SER A 210 ? VAL A 213 ? SER X 207 VAL X 210 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 5 ? N VAL X 5 O TYR A 169 ? O TYR X 166 A 2 3 O LEU A 166 ? O LEU X 163 N VAL A 135 ? N VAL X 130 B 1 2 N VAL A 5 ? N VAL X 5 O TYR A 169 ? O TYR X 166 B 2 3 N LEU A 165 ? N LEU X 162 O LYS A 181 ? O LYS X 174 B 3 4 N TRP A 178 ? N TRP X 171 O ILE A 196 ? O ILE X 189 B 4 5 O ARG A 195 ? O ARG X 188 N MET A 152 ? N MET X 149 C 1 2 N VAL A 83 ? N VAL X 80 O GLY A 109 ? O GLY X 103 D 1 2 N VAL A 116 ? N VAL X 111 O SER A 211 ? O SER X 208 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id X _struct_site.pdbx_auth_comp_id 186 _struct_site.pdbx_auth_seq_id 300 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 14 _struct_site.details 'BINDING SITE FOR RESIDUE 186 X 300' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 GLN A 19 ? GLN X 19 . ? 1_555 ? 2 AC1 14 GLY A 23 ? GLY X 23 . ? 1_555 ? 3 AC1 14 CYS A 25 ? CYS X 25 . ? 1_555 ? 4 AC1 14 TRP A 26 ? TRP X 26 . ? 1_555 ? 5 AC1 14 SER A 61 ? SER X 61 . ? 1_555 ? 6 AC1 14 GLY A 65 ? GLY X 65 . ? 1_555 ? 7 AC1 14 GLY A 66 ? GLY X 66 . ? 1_555 ? 8 AC1 14 LEU A 67 ? LEU X 67 . ? 1_555 ? 9 AC1 14 MET A 68 ? MET X 68 . ? 1_555 ? 10 AC1 14 ALA A 138 ? ALA X 133 . ? 1_555 ? 11 AC1 14 ASP A 161 ? ASP X 158 . ? 1_555 ? 12 AC1 14 HIS A 162 ? HIS X 159 . ? 1_555 ? 13 AC1 14 TRP A 184 ? TRP X 177 . ? 1_555 ? 14 AC1 14 HOH C . ? HOH X 353 . ? 1_555 ? # _pdbx_entry_details.entry_id 1U9Q _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O X VAL 148 ? ? N X MET 149 ? ? 1.79 2 1 SG X CYS 25 ? ? C7 X 186 300 ? ? 2.11 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C X GLY 103 ? ? N X ALA 105 ? ? 1.610 1.336 0.274 0.023 Y 2 1 C X VAL 148 ? ? N X MET 149 ? ? 1.089 1.336 -0.247 0.023 Y 3 1 C X GLY 192 ? ? N X SER 193 ? ? 1.585 1.336 0.249 0.023 Y 4 1 C X SER 193 ? ? N X ASN 198 ? ? 1.548 1.336 0.212 0.023 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 O X GLY 103 ? ? C X GLY 103 ? ? N X ALA 105 ? ? 101.86 122.70 -20.84 1.60 Y 2 1 CA X VAL 148 ? ? C X VAL 148 ? ? N X MET 149 ? ? 137.43 117.20 20.23 2.20 Y 3 1 O X VAL 148 ? ? C X VAL 148 ? ? N X MET 149 ? ? 101.42 122.70 -21.28 1.60 Y 4 1 C X VAL 148 ? ? N X MET 149 ? ? CA X MET 149 ? ? 141.83 121.70 20.13 2.50 Y 5 1 CA X MET 149 ? ? C X MET 149 ? ? N X THR 151 ? ? 142.89 117.20 25.69 2.20 Y 6 1 O X MET 149 ? ? C X MET 149 ? ? N X THR 151 ? ? 93.67 122.70 -29.03 1.60 Y 7 1 NE X ARG 188 ? ? CZ X ARG 188 ? ? NH1 X ARG 188 ? ? 124.12 120.30 3.82 0.50 N 8 1 NE X ARG 188 ? ? CZ X ARG 188 ? ? NH2 X ARG 188 ? ? 117.18 120.30 -3.12 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR X 86 ? ? -150.26 65.14 2 1 ASP X 116 ? ? -163.82 115.85 3 1 ASP X 158 ? ? -153.31 7.78 4 1 THR X 178 ? ? 70.67 172.07 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 GLY X 103 ? ? -26.01 2 1 MET X 149 ? ? -10.21 # loop_ _pdbx_validate_polymer_linkage.id _pdbx_validate_polymer_linkage.PDB_model_num _pdbx_validate_polymer_linkage.auth_atom_id_1 _pdbx_validate_polymer_linkage.auth_asym_id_1 _pdbx_validate_polymer_linkage.auth_comp_id_1 _pdbx_validate_polymer_linkage.auth_seq_id_1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 _pdbx_validate_polymer_linkage.label_alt_id_1 _pdbx_validate_polymer_linkage.auth_atom_id_2 _pdbx_validate_polymer_linkage.auth_asym_id_2 _pdbx_validate_polymer_linkage.auth_comp_id_2 _pdbx_validate_polymer_linkage.auth_seq_id_2 _pdbx_validate_polymer_linkage.PDB_ins_code_2 _pdbx_validate_polymer_linkage.label_alt_id_2 _pdbx_validate_polymer_linkage.dist 1 1 C X GLY 103 ? ? N X ALA 105 ? ? 1.61 2 1 C X ALA 136 ? ? N X SER 139 ? ? 1.67 3 1 C X VAL 148 ? ? N X MET 149 ? ? 1.09 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 186 O34 O N N 1 186 C18 C N N 2 186 O26 O N N 3 186 C27 C N N 4 186 C28 C Y N 5 186 C33 C Y N 6 186 C32 C Y N 7 186 C31 C Y N 8 186 C30 C Y N 9 186 C29 C Y N 10 186 N17 N N N 11 186 C13 C N R 12 186 C16 C N N 13 186 C20 C Y N 14 186 C25 C Y N 15 186 C24 C Y N 16 186 C23 C Y N 17 186 C22 C Y N 18 186 C21 C Y N 19 186 C12 C N N 20 186 O19 O N N 21 186 N11 N N N 22 186 C8 C N S 23 186 C14 C N N 24 186 C7 C N N 25 186 C6 C N N 26 186 C5 C N N 27 186 O10 O N N 28 186 C4 C N N 29 186 O9 O N N 30 186 H271 H N N 31 186 H272 H N N 32 186 H33 H N N 33 186 H32 H N N 34 186 H31 H N N 35 186 H30 H N N 36 186 H29 H N N 37 186 H17 H N N 38 186 H13 H N N 39 186 H161 H N N 40 186 H162 H N N 41 186 H25 H N N 42 186 H24 H N N 43 186 H23 H N N 44 186 H22 H N N 45 186 H21 H N N 46 186 H11 H N N 47 186 H8 H N N 48 186 H141 H N N 49 186 H142 H N N 50 186 H143 H N N 51 186 H7 H N N 52 186 H6 H N N 53 186 H4 H N N 54 ALA N N N N 55 ALA CA C N S 56 ALA C C N N 57 ALA O O N N 58 ALA CB C N N 59 ALA OXT O N N 60 ALA H H N N 61 ALA H2 H N N 62 ALA HA H N N 63 ALA HB1 H N N 64 ALA HB2 H N N 65 ALA HB3 H N N 66 ALA HXT H N N 67 ARG N N N N 68 ARG CA C N S 69 ARG C C N N 70 ARG O O N N 71 ARG CB C N N 72 ARG CG C N N 73 ARG CD C N N 74 ARG NE N N N 75 ARG CZ C N N 76 ARG NH1 N N N 77 ARG NH2 N N N 78 ARG OXT O N N 79 ARG H H N N 80 ARG H2 H N N 81 ARG HA H N N 82 ARG HB2 H N N 83 ARG HB3 H N N 84 ARG HG2 H N N 85 ARG HG3 H N N 86 ARG HD2 H N N 87 ARG HD3 H N N 88 ARG HE H N N 89 ARG HH11 H N N 90 ARG HH12 H N N 91 ARG HH21 H N N 92 ARG HH22 H N N 93 ARG HXT H N N 94 ASN N N N N 95 ASN CA C N S 96 ASN C C N N 97 ASN O O N N 98 ASN CB C N N 99 ASN CG C N N 100 ASN OD1 O N N 101 ASN ND2 N N N 102 ASN OXT O N N 103 ASN H H N N 104 ASN H2 H N N 105 ASN HA H N N 106 ASN HB2 H N N 107 ASN HB3 H N N 108 ASN HD21 H N N 109 ASN HD22 H N N 110 ASN HXT H N N 111 ASP N N N N 112 ASP CA C N S 113 ASP C C N N 114 ASP O O N N 115 ASP CB C N N 116 ASP CG C N N 117 ASP OD1 O N N 118 ASP OD2 O N N 119 ASP OXT O N N 120 ASP H H N N 121 ASP H2 H N N 122 ASP HA H N N 123 ASP HB2 H N N 124 ASP HB3 H N N 125 ASP HD2 H N N 126 ASP HXT H N N 127 CYS N N N N 128 CYS CA C N R 129 CYS C C N N 130 CYS O O N N 131 CYS CB C N N 132 CYS SG S N N 133 CYS OXT O N N 134 CYS H H N N 135 CYS H2 H N N 136 CYS HA H N N 137 CYS HB2 H N N 138 CYS HB3 H N N 139 CYS HG H N N 140 CYS HXT H N N 141 GLN N N N N 142 GLN CA C N S 143 GLN C C N N 144 GLN O O N N 145 GLN CB C N N 146 GLN CG C N N 147 GLN CD C N N 148 GLN OE1 O N N 149 GLN NE2 N N N 150 GLN OXT O N N 151 GLN H H N N 152 GLN H2 H N N 153 GLN HA H N N 154 GLN HB2 H N N 155 GLN HB3 H N N 156 GLN HG2 H N N 157 GLN HG3 H N N 158 GLN HE21 H N N 159 GLN HE22 H N N 160 GLN HXT H N N 161 GLU N N N N 162 GLU CA C N S 163 GLU C C N N 164 GLU O O N N 165 GLU CB C N N 166 GLU CG C N N 167 GLU CD C N N 168 GLU OE1 O N N 169 GLU OE2 O N N 170 GLU OXT O N N 171 GLU H H N N 172 GLU H2 H N N 173 GLU HA H N N 174 GLU HB2 H N N 175 GLU HB3 H N N 176 GLU HG2 H N N 177 GLU HG3 H N N 178 GLU HE2 H N N 179 GLU HXT H N N 180 GLY N N N N 181 GLY CA C N N 182 GLY C C N N 183 GLY O O N N 184 GLY OXT O N N 185 GLY H H N N 186 GLY H2 H N N 187 GLY HA2 H N N 188 GLY HA3 H N N 189 GLY HXT H N N 190 HIS N N N N 191 HIS CA C N S 192 HIS C C N N 193 HIS O O N N 194 HIS CB C N N 195 HIS CG C Y N 196 HIS ND1 N Y N 197 HIS CD2 C Y N 198 HIS CE1 C Y N 199 HIS NE2 N Y N 200 HIS OXT O N N 201 HIS H H N N 202 HIS H2 H N N 203 HIS HA H N N 204 HIS HB2 H N N 205 HIS HB3 H N N 206 HIS HD1 H N N 207 HIS HD2 H N N 208 HIS HE1 H N N 209 HIS HE2 H N N 210 HIS HXT H N N 211 HOH O O N N 212 HOH H1 H N N 213 HOH H2 H N N 214 ILE N N N N 215 ILE CA C N S 216 ILE C C N N 217 ILE O O N N 218 ILE CB C N S 219 ILE CG1 C N N 220 ILE CG2 C N N 221 ILE CD1 C N N 222 ILE OXT O N N 223 ILE H H N N 224 ILE H2 H N N 225 ILE HA H N N 226 ILE HB H N N 227 ILE HG12 H N N 228 ILE HG13 H N N 229 ILE HG21 H N N 230 ILE HG22 H N N 231 ILE HG23 H N N 232 ILE HD11 H N N 233 ILE HD12 H N N 234 ILE HD13 H N N 235 ILE HXT H N N 236 LEU N N N N 237 LEU CA C N S 238 LEU C C N N 239 LEU O O N N 240 LEU CB C N N 241 LEU CG C N N 242 LEU CD1 C N N 243 LEU CD2 C N N 244 LEU OXT O N N 245 LEU H H N N 246 LEU H2 H N N 247 LEU HA H N N 248 LEU HB2 H N N 249 LEU HB3 H N N 250 LEU HG H N N 251 LEU HD11 H N N 252 LEU HD12 H N N 253 LEU HD13 H N N 254 LEU HD21 H N N 255 LEU HD22 H N N 256 LEU HD23 H N N 257 LEU HXT H N N 258 LYS N N N N 259 LYS CA C N S 260 LYS C C N N 261 LYS O O N N 262 LYS CB C N N 263 LYS CG C N N 264 LYS CD C N N 265 LYS CE C N N 266 LYS NZ N N N 267 LYS OXT O N N 268 LYS H H N N 269 LYS H2 H N N 270 LYS HA H N N 271 LYS HB2 H N N 272 LYS HB3 H N N 273 LYS HG2 H N N 274 LYS HG3 H N N 275 LYS HD2 H N N 276 LYS HD3 H N N 277 LYS HE2 H N N 278 LYS HE3 H N N 279 LYS HZ1 H N N 280 LYS HZ2 H N N 281 LYS HZ3 H N N 282 LYS HXT H N N 283 MET N N N N 284 MET CA C N S 285 MET C C N N 286 MET O O N N 287 MET CB C N N 288 MET CG C N N 289 MET SD S N N 290 MET CE C N N 291 MET OXT O N N 292 MET H H N N 293 MET H2 H N N 294 MET HA H N N 295 MET HB2 H N N 296 MET HB3 H N N 297 MET HG2 H N N 298 MET HG3 H N N 299 MET HE1 H N N 300 MET HE2 H N N 301 MET HE3 H N N 302 MET HXT H N N 303 PHE N N N N 304 PHE CA C N S 305 PHE C C N N 306 PHE O O N N 307 PHE CB C N N 308 PHE CG C Y N 309 PHE CD1 C Y N 310 PHE CD2 C Y N 311 PHE CE1 C Y N 312 PHE CE2 C Y N 313 PHE CZ C Y N 314 PHE OXT O N N 315 PHE H H N N 316 PHE H2 H N N 317 PHE HA H N N 318 PHE HB2 H N N 319 PHE HB3 H N N 320 PHE HD1 H N N 321 PHE HD2 H N N 322 PHE HE1 H N N 323 PHE HE2 H N N 324 PHE HZ H N N 325 PHE HXT H N N 326 PRO N N N N 327 PRO CA C N S 328 PRO C C N N 329 PRO O O N N 330 PRO CB C N N 331 PRO CG C N N 332 PRO CD C N N 333 PRO OXT O N N 334 PRO H H N N 335 PRO HA H N N 336 PRO HB2 H N N 337 PRO HB3 H N N 338 PRO HG2 H N N 339 PRO HG3 H N N 340 PRO HD2 H N N 341 PRO HD3 H N N 342 PRO HXT H N N 343 SER N N N N 344 SER CA C N S 345 SER C C N N 346 SER O O N N 347 SER CB C N N 348 SER OG O N N 349 SER OXT O N N 350 SER H H N N 351 SER H2 H N N 352 SER HA H N N 353 SER HB2 H N N 354 SER HB3 H N N 355 SER HG H N N 356 SER HXT H N N 357 THR N N N N 358 THR CA C N S 359 THR C C N N 360 THR O O N N 361 THR CB C N R 362 THR OG1 O N N 363 THR CG2 C N N 364 THR OXT O N N 365 THR H H N N 366 THR H2 H N N 367 THR HA H N N 368 THR HB H N N 369 THR HG1 H N N 370 THR HG21 H N N 371 THR HG22 H N N 372 THR HG23 H N N 373 THR HXT H N N 374 TRP N N N N 375 TRP CA C N S 376 TRP C C N N 377 TRP O O N N 378 TRP CB C N N 379 TRP CG C Y N 380 TRP CD1 C Y N 381 TRP CD2 C Y N 382 TRP NE1 N Y N 383 TRP CE2 C Y N 384 TRP CE3 C Y N 385 TRP CZ2 C Y N 386 TRP CZ3 C Y N 387 TRP CH2 C Y N 388 TRP OXT O N N 389 TRP H H N N 390 TRP H2 H N N 391 TRP HA H N N 392 TRP HB2 H N N 393 TRP HB3 H N N 394 TRP HD1 H N N 395 TRP HE1 H N N 396 TRP HE3 H N N 397 TRP HZ2 H N N 398 TRP HZ3 H N N 399 TRP HH2 H N N 400 TRP HXT H N N 401 TYR N N N N 402 TYR CA C N S 403 TYR C C N N 404 TYR O O N N 405 TYR CB C N N 406 TYR CG C Y N 407 TYR CD1 C Y N 408 TYR CD2 C Y N 409 TYR CE1 C Y N 410 TYR CE2 C Y N 411 TYR CZ C Y N 412 TYR OH O N N 413 TYR OXT O N N 414 TYR H H N N 415 TYR H2 H N N 416 TYR HA H N N 417 TYR HB2 H N N 418 TYR HB3 H N N 419 TYR HD1 H N N 420 TYR HD2 H N N 421 TYR HE1 H N N 422 TYR HE2 H N N 423 TYR HH H N N 424 TYR HXT H N N 425 VAL N N N N 426 VAL CA C N S 427 VAL C C N N 428 VAL O O N N 429 VAL CB C N N 430 VAL CG1 C N N 431 VAL CG2 C N N 432 VAL OXT O N N 433 VAL H H N N 434 VAL H2 H N N 435 VAL HA H N N 436 VAL HB H N N 437 VAL HG11 H N N 438 VAL HG12 H N N 439 VAL HG13 H N N 440 VAL HG21 H N N 441 VAL HG22 H N N 442 VAL HG23 H N N 443 VAL HXT H N N 444 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 186 O34 C18 doub N N 1 186 C18 O26 sing N N 2 186 C18 N17 sing N N 3 186 O26 C27 sing N N 4 186 C27 C28 sing N N 5 186 C27 H271 sing N N 6 186 C27 H272 sing N N 7 186 C28 C33 doub Y N 8 186 C28 C29 sing Y N 9 186 C33 C32 sing Y N 10 186 C33 H33 sing N N 11 186 C32 C31 doub Y N 12 186 C32 H32 sing N N 13 186 C31 C30 sing Y N 14 186 C31 H31 sing N N 15 186 C30 C29 doub Y N 16 186 C30 H30 sing N N 17 186 C29 H29 sing N N 18 186 N17 C13 sing N N 19 186 N17 H17 sing N N 20 186 C13 C16 sing N N 21 186 C13 C12 sing N N 22 186 C13 H13 sing N N 23 186 C16 C20 sing N N 24 186 C16 H161 sing N N 25 186 C16 H162 sing N N 26 186 C20 C25 doub Y N 27 186 C20 C21 sing Y N 28 186 C25 C24 sing Y N 29 186 C25 H25 sing N N 30 186 C24 C23 doub Y N 31 186 C24 H24 sing N N 32 186 C23 C22 sing Y N 33 186 C23 H23 sing N N 34 186 C22 C21 doub Y N 35 186 C22 H22 sing N N 36 186 C21 H21 sing N N 37 186 C12 O19 doub N N 38 186 C12 N11 sing N N 39 186 N11 C8 sing N N 40 186 N11 H11 sing N N 41 186 C8 C14 sing N N 42 186 C8 C7 sing N N 43 186 C8 H8 sing N N 44 186 C14 H141 sing N N 45 186 C14 H142 sing N N 46 186 C14 H143 sing N N 47 186 C7 C6 doub N E 48 186 C7 H7 sing N N 49 186 C6 C5 sing N N 50 186 C6 H6 sing N N 51 186 C5 O10 doub N N 52 186 C5 C4 sing N N 53 186 C4 O9 doub N N 54 186 C4 H4 sing N N 55 ALA N CA sing N N 56 ALA N H sing N N 57 ALA N H2 sing N N 58 ALA CA C sing N N 59 ALA CA CB sing N N 60 ALA CA HA sing N N 61 ALA C O doub N N 62 ALA C OXT sing N N 63 ALA CB HB1 sing N N 64 ALA CB HB2 sing N N 65 ALA CB HB3 sing N N 66 ALA OXT HXT sing N N 67 ARG N CA sing N N 68 ARG N H sing N N 69 ARG N H2 sing N N 70 ARG CA C sing N N 71 ARG CA CB sing N N 72 ARG CA HA sing N N 73 ARG C O doub N N 74 ARG C OXT sing N N 75 ARG CB CG sing N N 76 ARG CB HB2 sing N N 77 ARG CB HB3 sing N N 78 ARG CG CD sing N N 79 ARG CG HG2 sing N N 80 ARG CG HG3 sing N N 81 ARG CD NE sing N N 82 ARG CD HD2 sing N N 83 ARG CD HD3 sing N N 84 ARG NE CZ sing N N 85 ARG NE HE sing N N 86 ARG CZ NH1 sing N N 87 ARG CZ NH2 doub N N 88 ARG NH1 HH11 sing N N 89 ARG NH1 HH12 sing N N 90 ARG NH2 HH21 sing N N 91 ARG NH2 HH22 sing N N 92 ARG OXT HXT sing N N 93 ASN N CA sing N N 94 ASN N H sing N N 95 ASN N H2 sing N N 96 ASN CA C sing N N 97 ASN CA CB sing N N 98 ASN CA HA sing N N 99 ASN C O doub N N 100 ASN C OXT sing N N 101 ASN CB CG sing N N 102 ASN CB HB2 sing N N 103 ASN CB HB3 sing N N 104 ASN CG OD1 doub N N 105 ASN CG ND2 sing N N 106 ASN ND2 HD21 sing N N 107 ASN ND2 HD22 sing N N 108 ASN OXT HXT sing N N 109 ASP N CA sing N N 110 ASP N H sing N N 111 ASP N H2 sing N N 112 ASP CA C sing N N 113 ASP CA CB sing N N 114 ASP CA HA sing N N 115 ASP C O doub N N 116 ASP C OXT sing N N 117 ASP CB CG sing N N 118 ASP CB HB2 sing N N 119 ASP CB HB3 sing N N 120 ASP CG OD1 doub N N 121 ASP CG OD2 sing N N 122 ASP OD2 HD2 sing N N 123 ASP OXT HXT sing N N 124 CYS N CA sing N N 125 CYS N H sing N N 126 CYS N H2 sing N N 127 CYS CA C sing N N 128 CYS CA CB sing N N 129 CYS CA HA sing N N 130 CYS C O doub N N 131 CYS C OXT sing N N 132 CYS CB SG sing N N 133 CYS CB HB2 sing N N 134 CYS CB HB3 sing N N 135 CYS SG HG sing N N 136 CYS OXT HXT sing N N 137 GLN N CA sing N N 138 GLN N H sing N N 139 GLN N H2 sing N N 140 GLN CA C sing N N 141 GLN CA CB sing N N 142 GLN CA HA sing N N 143 GLN C O doub N N 144 GLN C OXT sing N N 145 GLN CB CG sing N N 146 GLN CB HB2 sing N N 147 GLN CB HB3 sing N N 148 GLN CG CD sing N N 149 GLN CG HG2 sing N N 150 GLN CG HG3 sing N N 151 GLN CD OE1 doub N N 152 GLN CD NE2 sing N N 153 GLN NE2 HE21 sing N N 154 GLN NE2 HE22 sing N N 155 GLN OXT HXT sing N N 156 GLU N CA sing N N 157 GLU N H sing N N 158 GLU N H2 sing N N 159 GLU CA C sing N N 160 GLU CA CB sing N N 161 GLU CA HA sing N N 162 GLU C O doub N N 163 GLU C OXT sing N N 164 GLU CB CG sing N N 165 GLU CB HB2 sing N N 166 GLU CB HB3 sing N N 167 GLU CG CD sing N N 168 GLU CG HG2 sing N N 169 GLU CG HG3 sing N N 170 GLU CD OE1 doub N N 171 GLU CD OE2 sing N N 172 GLU OE2 HE2 sing N N 173 GLU OXT HXT sing N N 174 GLY N CA sing N N 175 GLY N H sing N N 176 GLY N H2 sing N N 177 GLY CA C sing N N 178 GLY CA HA2 sing N N 179 GLY CA HA3 sing N N 180 GLY C O doub N N 181 GLY C OXT sing N N 182 GLY OXT HXT sing N N 183 HIS N CA sing N N 184 HIS N H sing N N 185 HIS N H2 sing N N 186 HIS CA C sing N N 187 HIS CA CB sing N N 188 HIS CA HA sing N N 189 HIS C O doub N N 190 HIS C OXT sing N N 191 HIS CB CG sing N N 192 HIS CB HB2 sing N N 193 HIS CB HB3 sing N N 194 HIS CG ND1 sing Y N 195 HIS CG CD2 doub Y N 196 HIS ND1 CE1 doub Y N 197 HIS ND1 HD1 sing N N 198 HIS CD2 NE2 sing Y N 199 HIS CD2 HD2 sing N N 200 HIS CE1 NE2 sing Y N 201 HIS CE1 HE1 sing N N 202 HIS NE2 HE2 sing N N 203 HIS OXT HXT sing N N 204 HOH O H1 sing N N 205 HOH O H2 sing N N 206 ILE N CA sing N N 207 ILE N H sing N N 208 ILE N H2 sing N N 209 ILE CA C sing N N 210 ILE CA CB sing N N 211 ILE CA HA sing N N 212 ILE C O doub N N 213 ILE C OXT sing N N 214 ILE CB CG1 sing N N 215 ILE CB CG2 sing N N 216 ILE CB HB sing N N 217 ILE CG1 CD1 sing N N 218 ILE CG1 HG12 sing N N 219 ILE CG1 HG13 sing N N 220 ILE CG2 HG21 sing N N 221 ILE CG2 HG22 sing N N 222 ILE CG2 HG23 sing N N 223 ILE CD1 HD11 sing N N 224 ILE CD1 HD12 sing N N 225 ILE CD1 HD13 sing N N 226 ILE OXT HXT sing N N 227 LEU N CA sing N N 228 LEU N H sing N N 229 LEU N H2 sing N N 230 LEU CA C sing N N 231 LEU CA CB sing N N 232 LEU CA HA sing N N 233 LEU C O doub N N 234 LEU C OXT sing N N 235 LEU CB CG sing N N 236 LEU CB HB2 sing N N 237 LEU CB HB3 sing N N 238 LEU CG CD1 sing N N 239 LEU CG CD2 sing N N 240 LEU CG HG sing N N 241 LEU CD1 HD11 sing N N 242 LEU CD1 HD12 sing N N 243 LEU CD1 HD13 sing N N 244 LEU CD2 HD21 sing N N 245 LEU CD2 HD22 sing N N 246 LEU CD2 HD23 sing N N 247 LEU OXT HXT sing N N 248 LYS N CA sing N N 249 LYS N H sing N N 250 LYS N H2 sing N N 251 LYS CA C sing N N 252 LYS CA CB sing N N 253 LYS CA HA sing N N 254 LYS C O doub N N 255 LYS C OXT sing N N 256 LYS CB CG sing N N 257 LYS CB HB2 sing N N 258 LYS CB HB3 sing N N 259 LYS CG CD sing N N 260 LYS CG HG2 sing N N 261 LYS CG HG3 sing N N 262 LYS CD CE sing N N 263 LYS CD HD2 sing N N 264 LYS CD HD3 sing N N 265 LYS CE NZ sing N N 266 LYS CE HE2 sing N N 267 LYS CE HE3 sing N N 268 LYS NZ HZ1 sing N N 269 LYS NZ HZ2 sing N N 270 LYS NZ HZ3 sing N N 271 LYS OXT HXT sing N N 272 MET N CA sing N N 273 MET N H sing N N 274 MET N H2 sing N N 275 MET CA C sing N N 276 MET CA CB sing N N 277 MET CA HA sing N N 278 MET C O doub N N 279 MET C OXT sing N N 280 MET CB CG sing N N 281 MET CB HB2 sing N N 282 MET CB HB3 sing N N 283 MET CG SD sing N N 284 MET CG HG2 sing N N 285 MET CG HG3 sing N N 286 MET SD CE sing N N 287 MET CE HE1 sing N N 288 MET CE HE2 sing N N 289 MET CE HE3 sing N N 290 MET OXT HXT sing N N 291 PHE N CA sing N N 292 PHE N H sing N N 293 PHE N H2 sing N N 294 PHE CA C sing N N 295 PHE CA CB sing N N 296 PHE CA HA sing N N 297 PHE C O doub N N 298 PHE C OXT sing N N 299 PHE CB CG sing N N 300 PHE CB HB2 sing N N 301 PHE CB HB3 sing N N 302 PHE CG CD1 doub Y N 303 PHE CG CD2 sing Y N 304 PHE CD1 CE1 sing Y N 305 PHE CD1 HD1 sing N N 306 PHE CD2 CE2 doub Y N 307 PHE CD2 HD2 sing N N 308 PHE CE1 CZ doub Y N 309 PHE CE1 HE1 sing N N 310 PHE CE2 CZ sing Y N 311 PHE CE2 HE2 sing N N 312 PHE CZ HZ sing N N 313 PHE OXT HXT sing N N 314 PRO N CA sing N N 315 PRO N CD sing N N 316 PRO N H sing N N 317 PRO CA C sing N N 318 PRO CA CB sing N N 319 PRO CA HA sing N N 320 PRO C O doub N N 321 PRO C OXT sing N N 322 PRO CB CG sing N N 323 PRO CB HB2 sing N N 324 PRO CB HB3 sing N N 325 PRO CG CD sing N N 326 PRO CG HG2 sing N N 327 PRO CG HG3 sing N N 328 PRO CD HD2 sing N N 329 PRO CD HD3 sing N N 330 PRO OXT HXT sing N N 331 SER N CA sing N N 332 SER N H sing N N 333 SER N H2 sing N N 334 SER CA C sing N N 335 SER CA CB sing N N 336 SER CA HA sing N N 337 SER C O doub N N 338 SER C OXT sing N N 339 SER CB OG sing N N 340 SER CB HB2 sing N N 341 SER CB HB3 sing N N 342 SER OG HG sing N N 343 SER OXT HXT sing N N 344 THR N CA sing N N 345 THR N H sing N N 346 THR N H2 sing N N 347 THR CA C sing N N 348 THR CA CB sing N N 349 THR CA HA sing N N 350 THR C O doub N N 351 THR C OXT sing N N 352 THR CB OG1 sing N N 353 THR CB CG2 sing N N 354 THR CB HB sing N N 355 THR OG1 HG1 sing N N 356 THR CG2 HG21 sing N N 357 THR CG2 HG22 sing N N 358 THR CG2 HG23 sing N N 359 THR OXT HXT sing N N 360 TRP N CA sing N N 361 TRP N H sing N N 362 TRP N H2 sing N N 363 TRP CA C sing N N 364 TRP CA CB sing N N 365 TRP CA HA sing N N 366 TRP C O doub N N 367 TRP C OXT sing N N 368 TRP CB CG sing N N 369 TRP CB HB2 sing N N 370 TRP CB HB3 sing N N 371 TRP CG CD1 doub Y N 372 TRP CG CD2 sing Y N 373 TRP CD1 NE1 sing Y N 374 TRP CD1 HD1 sing N N 375 TRP CD2 CE2 doub Y N 376 TRP CD2 CE3 sing Y N 377 TRP NE1 CE2 sing Y N 378 TRP NE1 HE1 sing N N 379 TRP CE2 CZ2 sing Y N 380 TRP CE3 CZ3 doub Y N 381 TRP CE3 HE3 sing N N 382 TRP CZ2 CH2 doub Y N 383 TRP CZ2 HZ2 sing N N 384 TRP CZ3 CH2 sing Y N 385 TRP CZ3 HZ3 sing N N 386 TRP CH2 HH2 sing N N 387 TRP OXT HXT sing N N 388 TYR N CA sing N N 389 TYR N H sing N N 390 TYR N H2 sing N N 391 TYR CA C sing N N 392 TYR CA CB sing N N 393 TYR CA HA sing N N 394 TYR C O doub N N 395 TYR C OXT sing N N 396 TYR CB CG sing N N 397 TYR CB HB2 sing N N 398 TYR CB HB3 sing N N 399 TYR CG CD1 doub Y N 400 TYR CG CD2 sing Y N 401 TYR CD1 CE1 sing Y N 402 TYR CD1 HD1 sing N N 403 TYR CD2 CE2 doub Y N 404 TYR CD2 HD2 sing N N 405 TYR CE1 CZ doub Y N 406 TYR CE1 HE1 sing N N 407 TYR CE2 CZ sing Y N 408 TYR CE2 HE2 sing N N 409 TYR CZ OH sing N N 410 TYR OH HH sing N N 411 TYR OXT HXT sing N N 412 VAL N CA sing N N 413 VAL N H sing N N 414 VAL N H2 sing N N 415 VAL CA C sing N N 416 VAL CA CB sing N N 417 VAL CA HA sing N N 418 VAL C O doub N N 419 VAL C OXT sing N N 420 VAL CB CG1 sing N N 421 VAL CB CG2 sing N N 422 VAL CB HB sing N N 423 VAL CG1 HG11 sing N N 424 VAL CG1 HG12 sing N N 425 VAL CG1 HG13 sing N N 426 VAL CG2 HG21 sing N N 427 VAL CG2 HG22 sing N N 428 VAL CG2 HG23 sing N N 429 VAL OXT HXT sing N N 430 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1AIM _pdbx_initial_refinement_model.details 'cruzipain coordinate set 1AIM, without inhibitor or water molecules' # _atom_sites.entry_id 1U9Q _atom_sites.fract_transf_matrix[1][1] 0.021872 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.011020 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019734 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024569 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_