data_1UD8 # _entry.id 1UD8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1UD8 pdb_00001ud8 10.2210/pdb1ud8/pdb RCSB RCSB005696 ? ? WWPDB D_1000005696 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-07-22 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-12-27 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site 7 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.value' 18 4 'Structure model' '_struct_conn.pdbx_dist_value' 19 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 31 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1UD8 _pdbx_database_status.recvd_initial_deposition_date 2003-04-28 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1UD2 'the structure which sodium ions, instead of calcium ions, are used to retain the structure and function of AmyK38.' unspecified PDB 1UD3 'The structure of the N289H mutant of AmyK38.' unspecified PDB 1UD4 'The structure of the calcium-free alpha-amylase, AmyK38, from the crystal grown in the CaCl2 containing solution.' unspecified PDB 1UD5 'This structure was determined from the dataset of the crystal soaked into Rb+ ion containing solution.' unspecified PDB 1UD6 'This structure was determined from the dataset of the crystal soaked into K+ ion containing solution.' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nonaka, T.' 1 'Fujihashi, M.' 2 'Kita, A.' 3 'Hagihara, H.' 4 'Ozaki, K.' 5 'Ito, S.' 6 'Miki, K.' 7 # _citation.id primary _citation.title 'Crystal structure of calcium-free alpha-amylase from Bacillus sp. strain KSM-K38 (AmyK38) and its sodium ion binding sites' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 278 _citation.page_first 24818 _citation.page_last 24824 _citation.year 2003 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12719434 _citation.pdbx_database_id_DOI 10.1074/jbc.M212763200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nonaka, T.' 1 ? primary 'Fujihashi, M.' 2 ? primary 'Kita, A.' 3 ? primary 'Hagihara, H.' 4 ? primary 'Ozaki, K.' 5 ? primary 'Ito, S.' 6 ? primary 'Miki, K.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man amylase 55145.668 1 3.2.1.1 ? 'residues 1-480' ? 2 non-polymer syn 'SODIUM ION' 22.990 3 ? ? ? ? 3 water nat water 18.015 87 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name alpha-amylase # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DGLNGTMMQYYEWHLENDGQHWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTK AQLERAIGSLKSNDINVYGDVVMNHKMGADFTEAVQAVQVNPTNRWQDISGAYTIDAWTGFDFSGRNNAYSDFKWRWFHF NGVDWDQRYQENHIFRFANTNWNWRVDEENGNYDYLLGSNIDFSHPEVQDELKDWGSWFTDELDLDGYRLDAIKHIPFWY TSDWVRHQRNEADQDLFVVGEYWKDDVGALEFYLDEMNWEMSLFDVPLNYNFYRASQQGGSYDMRNILRGSLVEAHPMHA VTFVDNHDTQPGESLESWVADWFKPLAYATILTREGGYPNVFYGDYYGIPNDNISAKKDMIDELLDARQNYAYGTQHDYF DHWDVVGWTREGSSSRPNSGLATIMSNGPGGSKWMYVGRQNAGQTWTDLTGNNGASVTINGDGWGEFFTNGGSVSVYVNQ ; _entity_poly.pdbx_seq_one_letter_code_can ;DGLNGTMMQYYEWHLENDGQHWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTK AQLERAIGSLKSNDINVYGDVVMNHKMGADFTEAVQAVQVNPTNRWQDISGAYTIDAWTGFDFSGRNNAYSDFKWRWFHF NGVDWDQRYQENHIFRFANTNWNWRVDEENGNYDYLLGSNIDFSHPEVQDELKDWGSWFTDELDLDGYRLDAIKHIPFWY TSDWVRHQRNEADQDLFVVGEYWKDDVGALEFYLDEMNWEMSLFDVPLNYNFYRASQQGGSYDMRNILRGSLVEAHPMHA VTFVDNHDTQPGESLESWVADWFKPLAYATILTREGGYPNVFYGDYYGIPNDNISAKKDMIDELLDARQNYAYGTQHDYF DHWDVVGWTREGSSSRPNSGLATIMSNGPGGSKWMYVGRQNAGQTWTDLTGNNGASVTINGDGWGEFFTNGGSVSVYVNQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 GLY n 1 3 LEU n 1 4 ASN n 1 5 GLY n 1 6 THR n 1 7 MET n 1 8 MET n 1 9 GLN n 1 10 TYR n 1 11 TYR n 1 12 GLU n 1 13 TRP n 1 14 HIS n 1 15 LEU n 1 16 GLU n 1 17 ASN n 1 18 ASP n 1 19 GLY n 1 20 GLN n 1 21 HIS n 1 22 TRP n 1 23 ASN n 1 24 ARG n 1 25 LEU n 1 26 HIS n 1 27 ASP n 1 28 ASP n 1 29 ALA n 1 30 ALA n 1 31 ALA n 1 32 LEU n 1 33 SER n 1 34 ASP n 1 35 ALA n 1 36 GLY n 1 37 ILE n 1 38 THR n 1 39 ALA n 1 40 ILE n 1 41 TRP n 1 42 ILE n 1 43 PRO n 1 44 PRO n 1 45 ALA n 1 46 TYR n 1 47 LYS n 1 48 GLY n 1 49 ASN n 1 50 SER n 1 51 GLN n 1 52 ALA n 1 53 ASP n 1 54 VAL n 1 55 GLY n 1 56 TYR n 1 57 GLY n 1 58 ALA n 1 59 TYR n 1 60 ASP n 1 61 LEU n 1 62 TYR n 1 63 ASP n 1 64 LEU n 1 65 GLY n 1 66 GLU n 1 67 PHE n 1 68 ASN n 1 69 GLN n 1 70 LYS n 1 71 GLY n 1 72 THR n 1 73 VAL n 1 74 ARG n 1 75 THR n 1 76 LYS n 1 77 TYR n 1 78 GLY n 1 79 THR n 1 80 LYS n 1 81 ALA n 1 82 GLN n 1 83 LEU n 1 84 GLU n 1 85 ARG n 1 86 ALA n 1 87 ILE n 1 88 GLY n 1 89 SER n 1 90 LEU n 1 91 LYS n 1 92 SER n 1 93 ASN n 1 94 ASP n 1 95 ILE n 1 96 ASN n 1 97 VAL n 1 98 TYR n 1 99 GLY n 1 100 ASP n 1 101 VAL n 1 102 VAL n 1 103 MET n 1 104 ASN n 1 105 HIS n 1 106 LYS n 1 107 MET n 1 108 GLY n 1 109 ALA n 1 110 ASP n 1 111 PHE n 1 112 THR n 1 113 GLU n 1 114 ALA n 1 115 VAL n 1 116 GLN n 1 117 ALA n 1 118 VAL n 1 119 GLN n 1 120 VAL n 1 121 ASN n 1 122 PRO n 1 123 THR n 1 124 ASN n 1 125 ARG n 1 126 TRP n 1 127 GLN n 1 128 ASP n 1 129 ILE n 1 130 SER n 1 131 GLY n 1 132 ALA n 1 133 TYR n 1 134 THR n 1 135 ILE n 1 136 ASP n 1 137 ALA n 1 138 TRP n 1 139 THR n 1 140 GLY n 1 141 PHE n 1 142 ASP n 1 143 PHE n 1 144 SER n 1 145 GLY n 1 146 ARG n 1 147 ASN n 1 148 ASN n 1 149 ALA n 1 150 TYR n 1 151 SER n 1 152 ASP n 1 153 PHE n 1 154 LYS n 1 155 TRP n 1 156 ARG n 1 157 TRP n 1 158 PHE n 1 159 HIS n 1 160 PHE n 1 161 ASN n 1 162 GLY n 1 163 VAL n 1 164 ASP n 1 165 TRP n 1 166 ASP n 1 167 GLN n 1 168 ARG n 1 169 TYR n 1 170 GLN n 1 171 GLU n 1 172 ASN n 1 173 HIS n 1 174 ILE n 1 175 PHE n 1 176 ARG n 1 177 PHE n 1 178 ALA n 1 179 ASN n 1 180 THR n 1 181 ASN n 1 182 TRP n 1 183 ASN n 1 184 TRP n 1 185 ARG n 1 186 VAL n 1 187 ASP n 1 188 GLU n 1 189 GLU n 1 190 ASN n 1 191 GLY n 1 192 ASN n 1 193 TYR n 1 194 ASP n 1 195 TYR n 1 196 LEU n 1 197 LEU n 1 198 GLY n 1 199 SER n 1 200 ASN n 1 201 ILE n 1 202 ASP n 1 203 PHE n 1 204 SER n 1 205 HIS n 1 206 PRO n 1 207 GLU n 1 208 VAL n 1 209 GLN n 1 210 ASP n 1 211 GLU n 1 212 LEU n 1 213 LYS n 1 214 ASP n 1 215 TRP n 1 216 GLY n 1 217 SER n 1 218 TRP n 1 219 PHE n 1 220 THR n 1 221 ASP n 1 222 GLU n 1 223 LEU n 1 224 ASP n 1 225 LEU n 1 226 ASP n 1 227 GLY n 1 228 TYR n 1 229 ARG n 1 230 LEU n 1 231 ASP n 1 232 ALA n 1 233 ILE n 1 234 LYS n 1 235 HIS n 1 236 ILE n 1 237 PRO n 1 238 PHE n 1 239 TRP n 1 240 TYR n 1 241 THR n 1 242 SER n 1 243 ASP n 1 244 TRP n 1 245 VAL n 1 246 ARG n 1 247 HIS n 1 248 GLN n 1 249 ARG n 1 250 ASN n 1 251 GLU n 1 252 ALA n 1 253 ASP n 1 254 GLN n 1 255 ASP n 1 256 LEU n 1 257 PHE n 1 258 VAL n 1 259 VAL n 1 260 GLY n 1 261 GLU n 1 262 TYR n 1 263 TRP n 1 264 LYS n 1 265 ASP n 1 266 ASP n 1 267 VAL n 1 268 GLY n 1 269 ALA n 1 270 LEU n 1 271 GLU n 1 272 PHE n 1 273 TYR n 1 274 LEU n 1 275 ASP n 1 276 GLU n 1 277 MET n 1 278 ASN n 1 279 TRP n 1 280 GLU n 1 281 MET n 1 282 SER n 1 283 LEU n 1 284 PHE n 1 285 ASP n 1 286 VAL n 1 287 PRO n 1 288 LEU n 1 289 ASN n 1 290 TYR n 1 291 ASN n 1 292 PHE n 1 293 TYR n 1 294 ARG n 1 295 ALA n 1 296 SER n 1 297 GLN n 1 298 GLN n 1 299 GLY n 1 300 GLY n 1 301 SER n 1 302 TYR n 1 303 ASP n 1 304 MET n 1 305 ARG n 1 306 ASN n 1 307 ILE n 1 308 LEU n 1 309 ARG n 1 310 GLY n 1 311 SER n 1 312 LEU n 1 313 VAL n 1 314 GLU n 1 315 ALA n 1 316 HIS n 1 317 PRO n 1 318 MET n 1 319 HIS n 1 320 ALA n 1 321 VAL n 1 322 THR n 1 323 PHE n 1 324 VAL n 1 325 ASP n 1 326 ASN n 1 327 HIS n 1 328 ASP n 1 329 THR n 1 330 GLN n 1 331 PRO n 1 332 GLY n 1 333 GLU n 1 334 SER n 1 335 LEU n 1 336 GLU n 1 337 SER n 1 338 TRP n 1 339 VAL n 1 340 ALA n 1 341 ASP n 1 342 TRP n 1 343 PHE n 1 344 LYS n 1 345 PRO n 1 346 LEU n 1 347 ALA n 1 348 TYR n 1 349 ALA n 1 350 THR n 1 351 ILE n 1 352 LEU n 1 353 THR n 1 354 ARG n 1 355 GLU n 1 356 GLY n 1 357 GLY n 1 358 TYR n 1 359 PRO n 1 360 ASN n 1 361 VAL n 1 362 PHE n 1 363 TYR n 1 364 GLY n 1 365 ASP n 1 366 TYR n 1 367 TYR n 1 368 GLY n 1 369 ILE n 1 370 PRO n 1 371 ASN n 1 372 ASP n 1 373 ASN n 1 374 ILE n 1 375 SER n 1 376 ALA n 1 377 LYS n 1 378 LYS n 1 379 ASP n 1 380 MET n 1 381 ILE n 1 382 ASP n 1 383 GLU n 1 384 LEU n 1 385 LEU n 1 386 ASP n 1 387 ALA n 1 388 ARG n 1 389 GLN n 1 390 ASN n 1 391 TYR n 1 392 ALA n 1 393 TYR n 1 394 GLY n 1 395 THR n 1 396 GLN n 1 397 HIS n 1 398 ASP n 1 399 TYR n 1 400 PHE n 1 401 ASP n 1 402 HIS n 1 403 TRP n 1 404 ASP n 1 405 VAL n 1 406 VAL n 1 407 GLY n 1 408 TRP n 1 409 THR n 1 410 ARG n 1 411 GLU n 1 412 GLY n 1 413 SER n 1 414 SER n 1 415 SER n 1 416 ARG n 1 417 PRO n 1 418 ASN n 1 419 SER n 1 420 GLY n 1 421 LEU n 1 422 ALA n 1 423 THR n 1 424 ILE n 1 425 MET n 1 426 SER n 1 427 ASN n 1 428 GLY n 1 429 PRO n 1 430 GLY n 1 431 GLY n 1 432 SER n 1 433 LYS n 1 434 TRP n 1 435 MET n 1 436 TYR n 1 437 VAL n 1 438 GLY n 1 439 ARG n 1 440 GLN n 1 441 ASN n 1 442 ALA n 1 443 GLY n 1 444 GLN n 1 445 THR n 1 446 TRP n 1 447 THR n 1 448 ASP n 1 449 LEU n 1 450 THR n 1 451 GLY n 1 452 ASN n 1 453 ASN n 1 454 GLY n 1 455 ALA n 1 456 SER n 1 457 VAL n 1 458 THR n 1 459 ILE n 1 460 ASN n 1 461 GLY n 1 462 ASP n 1 463 GLY n 1 464 TRP n 1 465 GLY n 1 466 GLU n 1 467 PHE n 1 468 PHE n 1 469 THR n 1 470 ASN n 1 471 GLY n 1 472 GLY n 1 473 SER n 1 474 VAL n 1 475 SER n 1 476 VAL n 1 477 TYR n 1 478 VAL n 1 479 ASN n 1 480 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bacillus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus sp. KSM-K38' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 129736 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Bacillus subtilis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 1423 _entity_src_gen.host_org_genus Bacillus _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pHSP64 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP A . n A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 ASN 4 4 4 ASN ASN A . n A 1 5 GLY 5 5 5 GLY GLY A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 MET 7 7 7 MET MET A . n A 1 8 MET 8 8 8 MET MET A . n A 1 9 GLN 9 9 9 GLN GLN A . n A 1 10 TYR 10 10 10 TYR TYR A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 TRP 13 13 13 TRP TRP A . n A 1 14 HIS 14 14 14 HIS HIS A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 GLN 20 20 20 GLN GLN A . n A 1 21 HIS 21 21 21 HIS HIS A . n A 1 22 TRP 22 22 22 TRP TRP A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 HIS 26 26 26 HIS HIS A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 TRP 41 41 41 TRP TRP A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 TYR 46 46 46 TYR TYR A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 ASN 49 49 49 ASN ASN A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 GLN 51 51 51 GLN GLN A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 TYR 56 56 56 TYR TYR A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 TYR 62 62 62 TYR TYR A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 PHE 67 67 67 PHE PHE A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 THR 72 72 72 THR THR A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 TYR 77 77 77 TYR TYR A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 ILE 87 87 87 ILE ILE A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 ASN 96 96 96 ASN ASN A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 TYR 98 98 98 TYR TYR A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 MET 103 103 103 MET MET A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 HIS 105 105 105 HIS HIS A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 MET 107 107 107 MET MET A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 PHE 111 111 111 PHE PHE A . n A 1 112 THR 112 112 112 THR THR A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 GLN 116 116 116 GLN GLN A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 GLN 119 119 119 GLN GLN A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 ASN 121 121 121 ASN ASN A . n A 1 122 PRO 122 122 122 PRO PRO A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 TRP 126 126 126 TRP TRP A . n A 1 127 GLN 127 127 127 GLN GLN A . n A 1 128 ASP 128 128 128 ASP ASP A . n A 1 129 ILE 129 129 129 ILE ILE A . n A 1 130 SER 130 130 130 SER SER A . n A 1 131 GLY 131 131 131 GLY GLY A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 TYR 133 133 133 TYR TYR A . n A 1 134 THR 134 134 134 THR THR A . n A 1 135 ILE 135 135 135 ILE ILE A . n A 1 136 ASP 136 136 136 ASP ASP A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 TRP 138 138 138 TRP TRP A . n A 1 139 THR 139 139 139 THR THR A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 PHE 141 141 141 PHE PHE A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 PHE 143 143 143 PHE PHE A . n A 1 144 SER 144 144 144 SER SER A . n A 1 145 GLY 145 145 145 GLY GLY A . n A 1 146 ARG 146 146 146 ARG ARG A . n A 1 147 ASN 147 147 147 ASN ASN A . n A 1 148 ASN 148 148 148 ASN ASN A . n A 1 149 ALA 149 149 149 ALA ALA A . n A 1 150 TYR 150 150 150 TYR TYR A . n A 1 151 SER 151 151 151 SER SER A . n A 1 152 ASP 152 152 152 ASP ASP A . n A 1 153 PHE 153 153 153 PHE PHE A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 TRP 155 155 155 TRP TRP A . n A 1 156 ARG 156 156 156 ARG ARG A . n A 1 157 TRP 157 157 157 TRP TRP A . n A 1 158 PHE 158 158 158 PHE PHE A . n A 1 159 HIS 159 159 159 HIS HIS A . n A 1 160 PHE 160 160 160 PHE PHE A . n A 1 161 ASN 161 161 161 ASN ASN A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 VAL 163 163 163 VAL VAL A . n A 1 164 ASP 164 164 164 ASP ASP A . n A 1 165 TRP 165 165 165 TRP TRP A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 GLN 167 167 167 GLN GLN A . n A 1 168 ARG 168 168 168 ARG ARG A . n A 1 169 TYR 169 169 169 TYR TYR A . n A 1 170 GLN 170 170 170 GLN GLN A . n A 1 171 GLU 171 171 171 GLU GLU A . n A 1 172 ASN 172 172 172 ASN ASN A . n A 1 173 HIS 173 173 173 HIS HIS A . n A 1 174 ILE 174 174 174 ILE ILE A . n A 1 175 PHE 175 175 175 PHE PHE A . n A 1 176 ARG 176 176 176 ARG ARG A . n A 1 177 PHE 177 177 177 PHE PHE A . n A 1 178 ALA 178 178 178 ALA ALA A . n A 1 179 ASN 179 179 179 ASN ASN A . n A 1 180 THR 180 180 180 THR THR A . n A 1 181 ASN 181 181 181 ASN ASN A . n A 1 182 TRP 182 182 182 TRP TRP A . n A 1 183 ASN 183 183 183 ASN ASN A . n A 1 184 TRP 184 184 184 TRP TRP A . n A 1 185 ARG 185 185 185 ARG ARG A . n A 1 186 VAL 186 186 186 VAL VAL A . n A 1 187 ASP 187 187 187 ASP ASP A . n A 1 188 GLU 188 188 188 GLU GLU A . n A 1 189 GLU 189 189 189 GLU GLU A . n A 1 190 ASN 190 190 190 ASN ASN A . n A 1 191 GLY 191 191 191 GLY GLY A . n A 1 192 ASN 192 192 192 ASN ASN A . n A 1 193 TYR 193 193 193 TYR TYR A . n A 1 194 ASP 194 194 194 ASP ASP A . n A 1 195 TYR 195 195 195 TYR TYR A . n A 1 196 LEU 196 196 196 LEU LEU A . n A 1 197 LEU 197 197 197 LEU LEU A . n A 1 198 GLY 198 198 198 GLY GLY A . n A 1 199 SER 199 199 199 SER SER A . n A 1 200 ASN 200 200 200 ASN ASN A . n A 1 201 ILE 201 201 201 ILE ILE A . n A 1 202 ASP 202 202 202 ASP ASP A . n A 1 203 PHE 203 203 203 PHE PHE A . n A 1 204 SER 204 204 204 SER SER A . n A 1 205 HIS 205 205 205 HIS HIS A . n A 1 206 PRO 206 206 206 PRO PRO A . n A 1 207 GLU 207 207 207 GLU GLU A . n A 1 208 VAL 208 208 208 VAL VAL A . n A 1 209 GLN 209 209 209 GLN GLN A . n A 1 210 ASP 210 210 210 ASP ASP A . n A 1 211 GLU 211 211 211 GLU GLU A . n A 1 212 LEU 212 212 212 LEU LEU A . n A 1 213 LYS 213 213 213 LYS LYS A . n A 1 214 ASP 214 214 214 ASP ASP A . n A 1 215 TRP 215 215 215 TRP TRP A . n A 1 216 GLY 216 216 216 GLY GLY A . n A 1 217 SER 217 217 217 SER SER A . n A 1 218 TRP 218 218 218 TRP TRP A . n A 1 219 PHE 219 219 219 PHE PHE A . n A 1 220 THR 220 220 220 THR THR A . n A 1 221 ASP 221 221 221 ASP ASP A . n A 1 222 GLU 222 222 222 GLU GLU A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 ASP 224 224 224 ASP ASP A . n A 1 225 LEU 225 225 225 LEU LEU A . n A 1 226 ASP 226 226 226 ASP ASP A . n A 1 227 GLY 227 227 227 GLY GLY A . n A 1 228 TYR 228 228 228 TYR TYR A . n A 1 229 ARG 229 229 229 ARG ARG A . n A 1 230 LEU 230 230 230 LEU LEU A . n A 1 231 ASP 231 231 231 ASP ASP A . n A 1 232 ALA 232 232 232 ALA ALA A . n A 1 233 ILE 233 233 233 ILE ILE A . n A 1 234 LYS 234 234 234 LYS LYS A . n A 1 235 HIS 235 235 235 HIS HIS A . n A 1 236 ILE 236 236 236 ILE ILE A . n A 1 237 PRO 237 237 237 PRO PRO A . n A 1 238 PHE 238 238 238 PHE PHE A . n A 1 239 TRP 239 239 239 TRP TRP A . n A 1 240 TYR 240 240 240 TYR TYR A . n A 1 241 THR 241 241 241 THR THR A . n A 1 242 SER 242 242 242 SER SER A . n A 1 243 ASP 243 243 243 ASP ASP A . n A 1 244 TRP 244 244 244 TRP TRP A . n A 1 245 VAL 245 245 245 VAL VAL A . n A 1 246 ARG 246 246 246 ARG ARG A . n A 1 247 HIS 247 247 247 HIS HIS A . n A 1 248 GLN 248 248 248 GLN GLN A . n A 1 249 ARG 249 249 249 ARG ARG A . n A 1 250 ASN 250 250 250 ASN ASN A . n A 1 251 GLU 251 251 251 GLU GLU A . n A 1 252 ALA 252 252 252 ALA ALA A . n A 1 253 ASP 253 253 253 ASP ASP A . n A 1 254 GLN 254 254 254 GLN GLN A . n A 1 255 ASP 255 255 255 ASP ASP A . n A 1 256 LEU 256 256 256 LEU LEU A . n A 1 257 PHE 257 257 257 PHE PHE A . n A 1 258 VAL 258 258 258 VAL VAL A . n A 1 259 VAL 259 259 259 VAL VAL A . n A 1 260 GLY 260 260 260 GLY GLY A . n A 1 261 GLU 261 261 261 GLU GLU A . n A 1 262 TYR 262 262 262 TYR TYR A . n A 1 263 TRP 263 263 263 TRP TRP A . n A 1 264 LYS 264 264 264 LYS LYS A . n A 1 265 ASP 265 265 265 ASP ASP A . n A 1 266 ASP 266 266 266 ASP ASP A . n A 1 267 VAL 267 267 267 VAL VAL A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 ALA 269 269 269 ALA ALA A . n A 1 270 LEU 270 270 270 LEU LEU A . n A 1 271 GLU 271 271 271 GLU GLU A . n A 1 272 PHE 272 272 272 PHE PHE A . n A 1 273 TYR 273 273 273 TYR TYR A . n A 1 274 LEU 274 274 274 LEU LEU A . n A 1 275 ASP 275 275 275 ASP ASP A . n A 1 276 GLU 276 276 276 GLU GLU A . n A 1 277 MET 277 277 277 MET MET A . n A 1 278 ASN 278 278 278 ASN ASN A . n A 1 279 TRP 279 279 279 TRP TRP A . n A 1 280 GLU 280 280 280 GLU GLU A . n A 1 281 MET 281 281 281 MET MET A . n A 1 282 SER 282 282 282 SER SER A . n A 1 283 LEU 283 283 283 LEU LEU A . n A 1 284 PHE 284 284 284 PHE PHE A . n A 1 285 ASP 285 285 285 ASP ASP A . n A 1 286 VAL 286 286 286 VAL VAL A . n A 1 287 PRO 287 287 287 PRO PRO A . n A 1 288 LEU 288 288 288 LEU LEU A . n A 1 289 ASN 289 289 289 ASN ASN A . n A 1 290 TYR 290 290 290 TYR TYR A . n A 1 291 ASN 291 291 291 ASN ASN A . n A 1 292 PHE 292 292 292 PHE PHE A . n A 1 293 TYR 293 293 293 TYR TYR A . n A 1 294 ARG 294 294 294 ARG ARG A . n A 1 295 ALA 295 295 295 ALA ALA A . n A 1 296 SER 296 296 296 SER SER A . n A 1 297 GLN 297 297 297 GLN GLN A . n A 1 298 GLN 298 298 298 GLN GLN A . n A 1 299 GLY 299 299 299 GLY GLY A . n A 1 300 GLY 300 300 300 GLY GLY A . n A 1 301 SER 301 301 301 SER SER A . n A 1 302 TYR 302 302 302 TYR TYR A . n A 1 303 ASP 303 303 303 ASP ASP A . n A 1 304 MET 304 304 304 MET MET A . n A 1 305 ARG 305 305 305 ARG ARG A . n A 1 306 ASN 306 306 306 ASN ASN A . n A 1 307 ILE 307 307 307 ILE ILE A . n A 1 308 LEU 308 308 308 LEU LEU A . n A 1 309 ARG 309 309 309 ARG ARG A . n A 1 310 GLY 310 310 310 GLY GLY A . n A 1 311 SER 311 311 311 SER SER A . n A 1 312 LEU 312 312 312 LEU LEU A . n A 1 313 VAL 313 313 313 VAL VAL A . n A 1 314 GLU 314 314 314 GLU GLU A . n A 1 315 ALA 315 315 315 ALA ALA A . n A 1 316 HIS 316 316 316 HIS HIS A . n A 1 317 PRO 317 317 317 PRO PRO A . n A 1 318 MET 318 318 318 MET MET A . n A 1 319 HIS 319 319 319 HIS HIS A . n A 1 320 ALA 320 320 320 ALA ALA A . n A 1 321 VAL 321 321 321 VAL VAL A . n A 1 322 THR 322 322 322 THR THR A . n A 1 323 PHE 323 323 323 PHE PHE A . n A 1 324 VAL 324 324 324 VAL VAL A . n A 1 325 ASP 325 325 325 ASP ASP A . n A 1 326 ASN 326 326 326 ASN ASN A . n A 1 327 HIS 327 327 327 HIS HIS A . n A 1 328 ASP 328 328 328 ASP ASP A . n A 1 329 THR 329 329 329 THR THR A . n A 1 330 GLN 330 330 330 GLN GLN A . n A 1 331 PRO 331 331 331 PRO PRO A . n A 1 332 GLY 332 332 332 GLY GLY A . n A 1 333 GLU 333 333 333 GLU GLU A . n A 1 334 SER 334 334 334 SER SER A . n A 1 335 LEU 335 335 335 LEU LEU A . n A 1 336 GLU 336 336 336 GLU GLU A . n A 1 337 SER 337 337 337 SER SER A . n A 1 338 TRP 338 338 338 TRP TRP A . n A 1 339 VAL 339 339 339 VAL VAL A . n A 1 340 ALA 340 340 340 ALA ALA A . n A 1 341 ASP 341 341 341 ASP ASP A . n A 1 342 TRP 342 342 342 TRP TRP A . n A 1 343 PHE 343 343 343 PHE PHE A . n A 1 344 LYS 344 344 344 LYS LYS A . n A 1 345 PRO 345 345 345 PRO PRO A . n A 1 346 LEU 346 346 346 LEU LEU A . n A 1 347 ALA 347 347 347 ALA ALA A . n A 1 348 TYR 348 348 348 TYR TYR A . n A 1 349 ALA 349 349 349 ALA ALA A . n A 1 350 THR 350 350 350 THR THR A . n A 1 351 ILE 351 351 351 ILE ILE A . n A 1 352 LEU 352 352 352 LEU LEU A . n A 1 353 THR 353 353 353 THR THR A . n A 1 354 ARG 354 354 354 ARG ARG A . n A 1 355 GLU 355 355 355 GLU GLU A . n A 1 356 GLY 356 356 356 GLY GLY A . n A 1 357 GLY 357 357 357 GLY GLY A . n A 1 358 TYR 358 358 358 TYR TYR A . n A 1 359 PRO 359 359 359 PRO PRO A . n A 1 360 ASN 360 360 360 ASN ASN A . n A 1 361 VAL 361 361 361 VAL VAL A . n A 1 362 PHE 362 362 362 PHE PHE A . n A 1 363 TYR 363 363 363 TYR TYR A . n A 1 364 GLY 364 364 364 GLY GLY A . n A 1 365 ASP 365 365 365 ASP ASP A . n A 1 366 TYR 366 366 366 TYR TYR A . n A 1 367 TYR 367 367 367 TYR TYR A . n A 1 368 GLY 368 368 368 GLY GLY A . n A 1 369 ILE 369 369 369 ILE ILE A . n A 1 370 PRO 370 370 370 PRO PRO A . n A 1 371 ASN 371 371 371 ASN ASN A . n A 1 372 ASP 372 372 372 ASP ASP A . n A 1 373 ASN 373 373 373 ASN ASN A . n A 1 374 ILE 374 374 374 ILE ILE A . n A 1 375 SER 375 375 375 SER SER A . n A 1 376 ALA 376 376 376 ALA ALA A . n A 1 377 LYS 377 377 377 LYS LYS A . n A 1 378 LYS 378 378 378 LYS LYS A . n A 1 379 ASP 379 379 379 ASP ASP A . n A 1 380 MET 380 380 380 MET MET A . n A 1 381 ILE 381 381 381 ILE ILE A . n A 1 382 ASP 382 382 382 ASP ASP A . n A 1 383 GLU 383 383 383 GLU GLU A . n A 1 384 LEU 384 384 384 LEU LEU A . n A 1 385 LEU 385 385 385 LEU LEU A . n A 1 386 ASP 386 386 386 ASP ASP A . n A 1 387 ALA 387 387 387 ALA ALA A . n A 1 388 ARG 388 388 388 ARG ARG A . n A 1 389 GLN 389 389 389 GLN GLN A . n A 1 390 ASN 390 390 390 ASN ASN A . n A 1 391 TYR 391 391 391 TYR TYR A . n A 1 392 ALA 392 392 392 ALA ALA A . n A 1 393 TYR 393 393 393 TYR TYR A . n A 1 394 GLY 394 394 394 GLY GLY A . n A 1 395 THR 395 395 395 THR THR A . n A 1 396 GLN 396 396 396 GLN GLN A . n A 1 397 HIS 397 397 397 HIS HIS A . n A 1 398 ASP 398 398 398 ASP ASP A . n A 1 399 TYR 399 399 399 TYR TYR A . n A 1 400 PHE 400 400 400 PHE PHE A . n A 1 401 ASP 401 401 401 ASP ASP A . n A 1 402 HIS 402 402 402 HIS HIS A . n A 1 403 TRP 403 403 403 TRP TRP A . n A 1 404 ASP 404 404 404 ASP ASP A . n A 1 405 VAL 405 405 405 VAL VAL A . n A 1 406 VAL 406 406 406 VAL VAL A . n A 1 407 GLY 407 407 407 GLY GLY A . n A 1 408 TRP 408 408 408 TRP TRP A . n A 1 409 THR 409 409 409 THR THR A . n A 1 410 ARG 410 410 410 ARG ARG A . n A 1 411 GLU 411 411 411 GLU GLU A . n A 1 412 GLY 412 412 412 GLY GLY A . n A 1 413 SER 413 413 413 SER SER A . n A 1 414 SER 414 414 414 SER SER A . n A 1 415 SER 415 415 415 SER SER A . n A 1 416 ARG 416 416 416 ARG ARG A . n A 1 417 PRO 417 417 417 PRO PRO A . n A 1 418 ASN 418 418 418 ASN ASN A . n A 1 419 SER 419 419 419 SER SER A . n A 1 420 GLY 420 420 420 GLY GLY A . n A 1 421 LEU 421 421 421 LEU LEU A . n A 1 422 ALA 422 422 422 ALA ALA A . n A 1 423 THR 423 423 423 THR THR A . n A 1 424 ILE 424 424 424 ILE ILE A . n A 1 425 MET 425 425 425 MET MET A . n A 1 426 SER 426 426 426 SER SER A . n A 1 427 ASN 427 427 427 ASN ASN A . n A 1 428 GLY 428 428 428 GLY GLY A . n A 1 429 PRO 429 429 429 PRO PRO A . n A 1 430 GLY 430 430 430 GLY GLY A . n A 1 431 GLY 431 431 431 GLY GLY A . n A 1 432 SER 432 432 432 SER SER A . n A 1 433 LYS 433 433 433 LYS LYS A . n A 1 434 TRP 434 434 434 TRP TRP A . n A 1 435 MET 435 435 435 MET MET A . n A 1 436 TYR 436 436 436 TYR TYR A . n A 1 437 VAL 437 437 437 VAL VAL A . n A 1 438 GLY 438 438 438 GLY GLY A . n A 1 439 ARG 439 439 439 ARG ARG A . n A 1 440 GLN 440 440 440 GLN GLN A . n A 1 441 ASN 441 441 441 ASN ASN A . n A 1 442 ALA 442 442 442 ALA ALA A . n A 1 443 GLY 443 443 443 GLY GLY A . n A 1 444 GLN 444 444 444 GLN GLN A . n A 1 445 THR 445 445 445 THR THR A . n A 1 446 TRP 446 446 446 TRP TRP A . n A 1 447 THR 447 447 447 THR THR A . n A 1 448 ASP 448 448 448 ASP ASP A . n A 1 449 LEU 449 449 449 LEU LEU A . n A 1 450 THR 450 450 450 THR THR A . n A 1 451 GLY 451 451 451 GLY GLY A . n A 1 452 ASN 452 452 452 ASN ASN A . n A 1 453 ASN 453 453 453 ASN ASN A . n A 1 454 GLY 454 454 454 GLY GLY A . n A 1 455 ALA 455 455 455 ALA ALA A . n A 1 456 SER 456 456 456 SER SER A . n A 1 457 VAL 457 457 457 VAL VAL A . n A 1 458 THR 458 458 458 THR THR A . n A 1 459 ILE 459 459 459 ILE ILE A . n A 1 460 ASN 460 460 460 ASN ASN A . n A 1 461 GLY 461 461 461 GLY GLY A . n A 1 462 ASP 462 462 462 ASP ASP A . n A 1 463 GLY 463 463 463 GLY GLY A . n A 1 464 TRP 464 464 464 TRP TRP A . n A 1 465 GLY 465 465 465 GLY GLY A . n A 1 466 GLU 466 466 466 GLU GLU A . n A 1 467 PHE 467 467 467 PHE PHE A . n A 1 468 PHE 468 468 468 PHE PHE A . n A 1 469 THR 469 469 469 THR THR A . n A 1 470 ASN 470 470 470 ASN ASN A . n A 1 471 GLY 471 471 471 GLY GLY A . n A 1 472 GLY 472 472 472 GLY GLY A . n A 1 473 SER 473 473 473 SER SER A . n A 1 474 VAL 474 474 474 VAL VAL A . n A 1 475 SER 475 475 475 SER SER A . n A 1 476 VAL 476 476 476 VAL VAL A . n A 1 477 TYR 477 477 477 TYR TYR A . n A 1 478 VAL 478 478 478 VAL VAL A . n A 1 479 ASN 479 479 479 ASN ASN A . n A 1 480 GLN 480 480 480 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA 1 1001 1001 NA NA1 A . C 2 NA 1 1002 1002 NA NA1 A . D 2 NA 1 1003 1003 NA NA1 A . E 3 HOH 1 2001 2001 HOH HOH A . E 3 HOH 2 2002 2002 HOH HOH A . E 3 HOH 3 2003 2003 HOH HOH A . E 3 HOH 4 2004 2004 HOH HOH A . E 3 HOH 5 2005 2005 HOH HOH A . E 3 HOH 6 2006 2006 HOH HOH A . E 3 HOH 7 2007 2007 HOH HOH A . E 3 HOH 8 2008 2008 HOH HOH A . E 3 HOH 9 2009 2009 HOH HOH A . E 3 HOH 10 2010 2010 HOH HOH A . E 3 HOH 11 2011 2011 HOH HOH A . E 3 HOH 12 2012 2012 HOH HOH A . E 3 HOH 13 2013 2013 HOH HOH A . E 3 HOH 14 2014 2014 HOH HOH A . E 3 HOH 15 2015 2015 HOH HOH A . E 3 HOH 16 2016 2016 HOH HOH A . E 3 HOH 17 2017 2017 HOH HOH A . E 3 HOH 18 2018 2018 HOH HOH A . E 3 HOH 19 2019 2019 HOH HOH A . E 3 HOH 20 2020 2020 HOH HOH A . E 3 HOH 21 2021 2021 HOH HOH A . E 3 HOH 22 2022 2022 HOH HOH A . E 3 HOH 23 2023 2023 HOH HOH A . E 3 HOH 24 2024 2024 HOH HOH A . E 3 HOH 25 2025 2025 HOH HOH A . E 3 HOH 26 2026 2026 HOH HOH A . E 3 HOH 27 2027 2027 HOH HOH A . E 3 HOH 28 2028 2028 HOH HOH A . E 3 HOH 29 2029 2029 HOH HOH A . E 3 HOH 30 2030 2030 HOH HOH A . E 3 HOH 31 2031 2031 HOH HOH A . E 3 HOH 32 2032 2032 HOH HOH A . E 3 HOH 33 2033 2033 HOH HOH A . E 3 HOH 34 2034 2034 HOH HOH A . E 3 HOH 35 2035 2035 HOH HOH A . E 3 HOH 36 2036 2036 HOH HOH A . E 3 HOH 37 2037 2037 HOH HOH A . E 3 HOH 38 2038 2038 HOH HOH A . E 3 HOH 39 2039 2039 HOH HOH A . E 3 HOH 40 2040 2040 HOH HOH A . E 3 HOH 41 2041 2041 HOH HOH A . E 3 HOH 42 2042 2042 HOH HOH A . E 3 HOH 43 2043 2043 HOH HOH A . E 3 HOH 44 2044 2044 HOH HOH A . E 3 HOH 45 2045 2045 HOH HOH A . E 3 HOH 46 2046 2046 HOH HOH A . E 3 HOH 47 2047 2047 HOH HOH A . E 3 HOH 48 2048 2048 HOH HOH A . E 3 HOH 49 2049 2049 HOH HOH A . E 3 HOH 50 2050 2050 HOH HOH A . E 3 HOH 51 2051 2051 HOH HOH A . E 3 HOH 52 2052 2052 HOH HOH A . E 3 HOH 53 2053 2053 HOH HOH A . E 3 HOH 54 2054 2054 HOH HOH A . E 3 HOH 55 2055 2055 HOH HOH A . E 3 HOH 56 2056 2056 HOH HOH A . E 3 HOH 57 2057 2057 HOH HOH A . E 3 HOH 58 2058 2058 HOH HOH A . E 3 HOH 59 2059 2059 HOH HOH A . E 3 HOH 60 2060 2060 HOH HOH A . E 3 HOH 61 2061 2061 HOH HOH A . E 3 HOH 62 2062 2062 HOH HOH A . E 3 HOH 63 2063 2063 HOH HOH A . E 3 HOH 64 2064 2064 HOH HOH A . E 3 HOH 65 2065 2065 HOH HOH A . E 3 HOH 66 2066 2066 HOH HOH A . E 3 HOH 67 2067 2067 HOH HOH A . E 3 HOH 68 2068 2068 HOH HOH A . E 3 HOH 69 2069 2069 HOH HOH A . E 3 HOH 70 2070 2070 HOH HOH A . E 3 HOH 71 2071 2071 HOH HOH A . E 3 HOH 72 2072 2072 HOH HOH A . E 3 HOH 73 2073 2073 HOH HOH A . E 3 HOH 74 2074 2074 HOH HOH A . E 3 HOH 75 2075 2075 HOH HOH A . E 3 HOH 76 2076 2076 HOH HOH A . E 3 HOH 77 2077 2077 HOH HOH A . E 3 HOH 78 2078 2078 HOH HOH A . E 3 HOH 79 2079 2079 HOH HOH A . E 3 HOH 80 2080 2080 HOH HOH A . E 3 HOH 81 2081 2081 HOH HOH A . E 3 HOH 82 2082 2082 HOH HOH A . E 3 HOH 83 2083 2083 HOH HOH A . E 3 HOH 84 2084 2084 HOH HOH A . E 3 HOH 85 2085 2085 HOH HOH A . E 3 HOH 86 2086 2086 HOH HOH A . E 3 HOH 87 2087 2087 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.0 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 AMoRE phasing . ? 4 # _cell.entry_id 1UD8 _cell.length_a 132.553 _cell.length_b 132.553 _cell.length_c 132.553 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1UD8 _symmetry.space_group_name_H-M 'P 2 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 195 # _exptl.entry_id 1UD8 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.52 _exptl_crystal.density_percent_sol 65.04 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'Soaking of native crystals' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.7 _exptl_crystal_grow.pdbx_details 'PEG 8000, lithium acetate, glycerol, MES-LiOH, Tris-HCl, pH 6.7, Soaking of native crystals, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL44B2' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL44B2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 1UD8 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100 _reflns.d_resolution_high 2.88 _reflns.number_obs 17867 _reflns.number_all 17867 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs 0.137 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 23.5 _reflns.B_iso_Wilson_estimate 54.8 _reflns.pdbx_redundancy 21.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.88 _reflns_shell.d_res_low 2.98 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.297 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 12.8 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1739 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1UD8 _refine.ls_number_reflns_obs 17611 _refine.ls_number_reflns_all 17856 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 2038246.49 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 59.28 _refine.ls_d_res_high 2.88 _refine.ls_percent_reflns_obs 98.6 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.205 _refine.ls_R_factor_R_free 0.268 _refine.ls_R_factor_R_free_error 0.009 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 889 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 26.2 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.411481 _refine.solvent_model_param_bsol 38.4544 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;This structure was determined from the dataset of the crystal soaked into Li+ ion containing solution. However, metal atoms were refined as sodium ions. ; _refine.pdbx_starting_model 'Model of native AmyK38 structure' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1UD8 _refine_analyze.Luzzati_coordinate_error_obs 0.32 _refine_analyze.Luzzati_sigma_a_obs 0.37 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.44 _refine_analyze.Luzzati_sigma_a_free 0.48 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3908 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 87 _refine_hist.number_atoms_total 3998 _refine_hist.d_res_high 2.88 _refine_hist.d_res_low 59.28 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.9 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.78 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.94 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 3.07 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.84 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 4.14 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.88 _refine_ls_shell.d_res_low 3.06 _refine_ls_shell.number_reflns_R_work 2689 _refine_ls_shell.R_factor_R_work 0.281 _refine_ls_shell.percent_reflns_obs 96.4 _refine_ls_shell.R_factor_R_free 0.354 _refine_ls_shell.R_factor_R_free_error 0.030 _refine_ls_shell.percent_reflns_R_free 4.8 _refine_ls_shell.number_reflns_R_free 137 _refine_ls_shell.number_reflns_obs 2826 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' 4 CISPEP_2003.PARAM ? 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1UD8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1UD8 _struct.title 'Crystal structure of AmyK38 with lithium ion' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1UD8 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'calcium-free, alkaline, alpha-amylase, hydrolase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q93I48_9BACI _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DGLNGTMMQYYEWHLENDGQHWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTK AQLERAIGSLKSNDINVYGDVVMNHKMGADFTEAVQAVQVNPTNRWQDISGAYTIDAWTGFDFSGRNNAYSDFKWRWFHF NGVDWDQRYQENHIFRFANTNWNWRVDEENGNYDYLLGSNIDFSHPEVQDELKDWGSWFTDELDLDGYRLDAIKHIPFWY TSDWVRHQRNEADQDLFVVGEYWKDDVGALEFYLDEMNWEMSLFDVPLNYNFYRASQQGGSYDMRNILRGSLVEAHPMHA VTFVDNHDTQPGESLESWVADWFKPLAYATILTREGGYPNVFYGDYYGIPNDNISAKKDMIDELLDARQNYAYGTQHDYF DHWDVVGWTREGSSSRPNSGLATIMSNGPGGSKWMYVGRQNAGQTWTDLTGNNGASVTINGDGWGEFFTNGGSVSVYVNQ ; _struct_ref.pdbx_align_begin 22 _struct_ref.pdbx_db_accession Q93I48 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1UD8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 480 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q93I48 _struct_ref_seq.db_align_beg 22 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 501 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 480 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 20 ? GLY A 36 ? GLN A 20 GLY A 36 1 ? 17 HELX_P HELX_P2 2 THR A 79 ? ASN A 93 ? THR A 79 ASN A 93 1 ? 15 HELX_P HELX_P3 3 PHE A 143 ? ASN A 147 ? PHE A 143 ASN A 147 5 ? 5 HELX_P HELX_P4 4 ARG A 156 ? PHE A 158 ? ARG A 156 PHE A 158 5 ? 3 HELX_P HELX_P5 5 HIS A 205 ? ASP A 224 ? HIS A 205 ASP A 224 1 ? 20 HELX_P HELX_P6 6 PRO A 237 ? ALA A 252 ? PRO A 237 ALA A 252 1 ? 16 HELX_P HELX_P7 7 ASP A 266 ? ASN A 278 ? ASP A 266 ASN A 278 1 ? 13 HELX_P HELX_P8 8 ASP A 285 ? GLY A 299 ? ASP A 285 GLY A 299 1 ? 15 HELX_P HELX_P9 9 ASP A 303 ? ILE A 307 ? ASP A 303 ILE A 307 5 ? 5 HELX_P HELX_P10 10 SER A 311 ? HIS A 316 ? SER A 311 HIS A 316 1 ? 6 HELX_P HELX_P11 11 PHE A 343 ? ARG A 354 ? PHE A 343 ARG A 354 1 ? 12 HELX_P HELX_P12 12 TYR A 363 ? TYR A 367 ? TYR A 363 TYR A 367 1 ? 5 HELX_P HELX_P13 13 ILE A 369 ? ASN A 373 ? ILE A 369 ASN A 373 5 ? 5 HELX_P HELX_P14 14 LYS A 377 ? TYR A 391 ? LYS A 377 TYR A 391 1 ? 15 HELX_P HELX_P15 15 GLY A 438 ? ALA A 442 ? GLY A 438 ALA A 442 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASN 104 OD1 ? ? ? 1_555 B NA . NA ? ? A ASN 104 A NA 1001 1_555 ? ? ? ? ? ? ? 2.361 ? ? metalc2 metalc ? ? A ASP 194 OD1 ? ? ? 1_555 B NA . NA ? ? A ASP 194 A NA 1001 1_555 ? ? ? ? ? ? ? 2.421 ? ? metalc3 metalc ? ? A ASP 194 O ? ? ? 1_555 B NA . NA ? ? A ASP 194 A NA 1001 1_555 ? ? ? ? ? ? ? 2.550 ? ? metalc4 metalc ? ? A ASN 200 OD1 ? ? ? 1_555 B NA . NA ? ? A ASN 200 A NA 1001 1_555 ? ? ? ? ? ? ? 2.607 ? ? metalc5 metalc ? ? A HIS 235 O ? ? ? 1_555 B NA . NA ? ? A HIS 235 A NA 1001 1_555 ? ? ? ? ? ? ? 2.305 ? ? metalc6 metalc ? ? A ASN 289 O ? ? ? 1_555 D NA . NA ? ? A ASN 289 A NA 1003 1_555 ? ? ? ? ? ? ? 2.834 ? ? metalc7 metalc ? ? A ASN 289 OD1 ? ? ? 1_555 D NA . NA ? ? A ASN 289 A NA 1003 1_555 ? ? ? ? ? ? ? 2.669 ? ? metalc8 metalc ? ? A GLY 300 O ? ? ? 1_555 C NA . NA ? ? A GLY 300 A NA 1002 1_555 ? ? ? ? ? ? ? 2.224 ? ? metalc9 metalc ? ? A TYR 302 O ? ? ? 1_555 C NA . NA ? ? A TYR 302 A NA 1002 1_555 ? ? ? ? ? ? ? 2.447 ? ? metalc10 metalc ? ? A VAL 324 O ? ? ? 1_555 D NA . NA ? ? A VAL 324 A NA 1003 1_555 ? ? ? ? ? ? ? 2.960 ? ? metalc11 metalc ? ? A ASP 325 OD1 ? ? ? 1_555 D NA . NA ? ? A ASP 325 A NA 1003 1_555 ? ? ? ? ? ? ? 2.835 ? ? metalc12 metalc ? ? A SER 337 O ? ? ? 1_555 D NA . NA ? ? A SER 337 A NA 1003 1_555 ? ? ? ? ? ? ? 2.691 ? ? metalc13 metalc ? ? A TRP 403 O ? ? ? 1_555 C NA . NA ? ? A TRP 403 A NA 1002 1_555 ? ? ? ? ? ? ? 2.459 ? ? metalc14 metalc ? ? A ASP 404 OD1 ? ? ? 1_555 C NA . NA ? ? A ASP 404 A NA 1002 1_555 ? ? ? ? ? ? ? 2.310 ? ? metalc15 metalc ? ? C NA . NA ? ? ? 1_555 E HOH . O ? ? A NA 1002 A HOH 2018 1_555 ? ? ? ? ? ? ? 2.476 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASN 104 ? A ASN 104 ? 1_555 NA ? B NA . ? A NA 1001 ? 1_555 OD1 ? A ASP 194 ? A ASP 194 ? 1_555 172.3 ? 2 OD1 ? A ASN 104 ? A ASN 104 ? 1_555 NA ? B NA . ? A NA 1001 ? 1_555 O ? A ASP 194 ? A ASP 194 ? 1_555 105.9 ? 3 OD1 ? A ASP 194 ? A ASP 194 ? 1_555 NA ? B NA . ? A NA 1001 ? 1_555 O ? A ASP 194 ? A ASP 194 ? 1_555 70.3 ? 4 OD1 ? A ASN 104 ? A ASN 104 ? 1_555 NA ? B NA . ? A NA 1001 ? 1_555 OD1 ? A ASN 200 ? A ASN 200 ? 1_555 89.7 ? 5 OD1 ? A ASP 194 ? A ASP 194 ? 1_555 NA ? B NA . ? A NA 1001 ? 1_555 OD1 ? A ASN 200 ? A ASN 200 ? 1_555 95.4 ? 6 O ? A ASP 194 ? A ASP 194 ? 1_555 NA ? B NA . ? A NA 1001 ? 1_555 OD1 ? A ASN 200 ? A ASN 200 ? 1_555 73.2 ? 7 OD1 ? A ASN 104 ? A ASN 104 ? 1_555 NA ? B NA . ? A NA 1001 ? 1_555 O ? A HIS 235 ? A HIS 235 ? 1_555 91.9 ? 8 OD1 ? A ASP 194 ? A ASP 194 ? 1_555 NA ? B NA . ? A NA 1001 ? 1_555 O ? A HIS 235 ? A HIS 235 ? 1_555 81.4 ? 9 O ? A ASP 194 ? A ASP 194 ? 1_555 NA ? B NA . ? A NA 1001 ? 1_555 O ? A HIS 235 ? A HIS 235 ? 1_555 88.2 ? 10 OD1 ? A ASN 200 ? A ASN 200 ? 1_555 NA ? B NA . ? A NA 1001 ? 1_555 O ? A HIS 235 ? A HIS 235 ? 1_555 161.1 ? 11 O ? A ASN 289 ? A ASN 289 ? 1_555 NA ? D NA . ? A NA 1003 ? 1_555 OD1 ? A ASN 289 ? A ASN 289 ? 1_555 88.2 ? 12 O ? A ASN 289 ? A ASN 289 ? 1_555 NA ? D NA . ? A NA 1003 ? 1_555 O ? A VAL 324 ? A VAL 324 ? 1_555 117.3 ? 13 OD1 ? A ASN 289 ? A ASN 289 ? 1_555 NA ? D NA . ? A NA 1003 ? 1_555 O ? A VAL 324 ? A VAL 324 ? 1_555 65.3 ? 14 O ? A ASN 289 ? A ASN 289 ? 1_555 NA ? D NA . ? A NA 1003 ? 1_555 OD1 ? A ASP 325 ? A ASP 325 ? 1_555 168.5 ? 15 OD1 ? A ASN 289 ? A ASN 289 ? 1_555 NA ? D NA . ? A NA 1003 ? 1_555 OD1 ? A ASP 325 ? A ASP 325 ? 1_555 80.4 ? 16 O ? A VAL 324 ? A VAL 324 ? 1_555 NA ? D NA . ? A NA 1003 ? 1_555 OD1 ? A ASP 325 ? A ASP 325 ? 1_555 56.0 ? 17 O ? A ASN 289 ? A ASN 289 ? 1_555 NA ? D NA . ? A NA 1003 ? 1_555 O ? A SER 337 ? A SER 337 ? 1_555 119.8 ? 18 OD1 ? A ASN 289 ? A ASN 289 ? 1_555 NA ? D NA . ? A NA 1003 ? 1_555 O ? A SER 337 ? A SER 337 ? 1_555 124.0 ? 19 O ? A VAL 324 ? A VAL 324 ? 1_555 NA ? D NA . ? A NA 1003 ? 1_555 O ? A SER 337 ? A SER 337 ? 1_555 122.1 ? 20 OD1 ? A ASP 325 ? A ASP 325 ? 1_555 NA ? D NA . ? A NA 1003 ? 1_555 O ? A SER 337 ? A SER 337 ? 1_555 69.0 ? 21 O ? A GLY 300 ? A GLY 300 ? 1_555 NA ? C NA . ? A NA 1002 ? 1_555 O ? A TYR 302 ? A TYR 302 ? 1_555 77.0 ? 22 O ? A GLY 300 ? A GLY 300 ? 1_555 NA ? C NA . ? A NA 1002 ? 1_555 O ? A TRP 403 ? A TRP 403 ? 1_555 169.9 ? 23 O ? A TYR 302 ? A TYR 302 ? 1_555 NA ? C NA . ? A NA 1002 ? 1_555 O ? A TRP 403 ? A TRP 403 ? 1_555 93.0 ? 24 O ? A GLY 300 ? A GLY 300 ? 1_555 NA ? C NA . ? A NA 1002 ? 1_555 OD1 ? A ASP 404 ? A ASP 404 ? 1_555 111.1 ? 25 O ? A TYR 302 ? A TYR 302 ? 1_555 NA ? C NA . ? A NA 1002 ? 1_555 OD1 ? A ASP 404 ? A ASP 404 ? 1_555 171.0 ? 26 O ? A TRP 403 ? A TRP 403 ? 1_555 NA ? C NA . ? A NA 1002 ? 1_555 OD1 ? A ASP 404 ? A ASP 404 ? 1_555 78.8 ? 27 O ? A GLY 300 ? A GLY 300 ? 1_555 NA ? C NA . ? A NA 1002 ? 1_555 O ? E HOH . ? A HOH 2018 ? 1_555 85.0 ? 28 O ? A TYR 302 ? A TYR 302 ? 1_555 NA ? C NA . ? A NA 1002 ? 1_555 O ? E HOH . ? A HOH 2018 ? 1_555 88.9 ? 29 O ? A TRP 403 ? A TRP 403 ? 1_555 NA ? C NA . ? A NA 1002 ? 1_555 O ? E HOH . ? A HOH 2018 ? 1_555 93.5 ? 30 OD1 ? A ASP 404 ? A ASP 404 ? 1_555 NA ? C NA . ? A NA 1002 ? 1_555 O ? E HOH . ? A HOH 2018 ? 1_555 88.1 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TRP _struct_mon_prot_cis.label_seq_id 184 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TRP _struct_mon_prot_cis.auth_seq_id 184 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 ARG _struct_mon_prot_cis.pdbx_label_seq_id_2 185 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 ARG _struct_mon_prot_cis.pdbx_auth_seq_id_2 185 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.26 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 2 ? C ? 3 ? D ? 6 ? E ? 6 ? F ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel D 5 6 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel E 5 6 ? anti-parallel F 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 320 ? VAL A 321 ? ALA A 320 VAL A 321 A 2 SER A 282 ? PHE A 284 ? SER A 282 PHE A 284 A 3 PHE A 257 ? GLY A 260 ? PHE A 257 GLY A 260 A 4 GLY A 227 ? LEU A 230 ? GLY A 227 LEU A 230 A 5 ASN A 96 ? VAL A 101 ? ASN A 96 VAL A 101 A 6 ALA A 39 ? ILE A 42 ? ALA A 39 ILE A 42 A 7 MET A 7 ? GLN A 9 ? MET A 7 GLN A 9 A 8 ASN A 360 ? PHE A 362 ? ASN A 360 PHE A 362 B 1 LYS A 47 ? GLY A 48 ? LYS A 47 GLY A 48 B 2 ALA A 58 ? ASP A 60 ? ALA A 58 ASP A 60 C 1 TYR A 133 ? GLY A 140 ? TYR A 133 GLY A 140 C 2 PHE A 111 ? ASN A 121 ? PHE A 111 ASN A 121 C 3 ASN A 124 ? ASP A 128 ? ASN A 124 ASP A 128 D 1 TYR A 133 ? GLY A 140 ? TYR A 133 GLY A 140 D 2 PHE A 111 ? ASN A 121 ? PHE A 111 ASN A 121 D 3 GLU A 171 ? PHE A 177 ? GLU A 171 PHE A 177 D 4 PHE A 160 ? ASP A 166 ? PHE A 160 ASP A 166 D 5 SER A 199 ? ILE A 201 ? SER A 199 ILE A 201 D 6 HIS A 105 ? LYS A 106 ? HIS A 105 LYS A 106 E 1 GLN A 396 ? TYR A 399 ? GLN A 396 TYR A 399 E 2 VAL A 405 ? ARG A 410 ? VAL A 405 ARG A 410 E 3 LEU A 421 ? SER A 426 ? LEU A 421 SER A 426 E 4 SER A 473 ? VAL A 478 ? SER A 473 VAL A 478 E 5 THR A 445 ? ASP A 448 ? THR A 445 ASP A 448 E 6 SER A 456 ? THR A 458 ? SER A 456 THR A 458 F 1 GLY A 431 ? TYR A 436 ? GLY A 431 TYR A 436 F 2 TRP A 464 ? THR A 469 ? TRP A 464 THR A 469 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 321 ? O VAL A 321 N LEU A 283 ? N LEU A 283 A 2 3 O SER A 282 ? O SER A 282 N GLY A 260 ? N GLY A 260 A 3 4 O VAL A 259 ? O VAL A 259 N TYR A 228 ? N TYR A 228 A 4 5 O ARG A 229 ? O ARG A 229 N GLY A 99 ? N GLY A 99 A 5 6 O ASN A 96 ? O ASN A 96 N ILE A 40 ? N ILE A 40 A 6 7 O TRP A 41 ? O TRP A 41 N MET A 8 ? N MET A 8 A 7 8 N MET A 7 ? N MET A 7 O VAL A 361 ? O VAL A 361 B 1 2 N LYS A 47 ? N LYS A 47 O TYR A 59 ? O TYR A 59 C 1 2 O ILE A 135 ? O ILE A 135 N VAL A 115 ? N VAL A 115 C 2 3 N ASN A 121 ? N ASN A 121 O GLN A 127 ? O GLN A 127 D 1 2 O ILE A 135 ? O ILE A 135 N VAL A 115 ? N VAL A 115 D 2 3 N VAL A 118 ? N VAL A 118 O ARG A 176 ? O ARG A 176 D 3 4 O PHE A 175 ? O PHE A 175 N VAL A 163 ? N VAL A 163 D 4 5 N GLY A 162 ? N GLY A 162 O ASN A 200 ? O ASN A 200 D 5 6 O SER A 199 ? O SER A 199 N LYS A 106 ? N LYS A 106 E 1 2 N HIS A 397 ? N HIS A 397 O THR A 409 ? O THR A 409 E 2 3 N ARG A 410 ? N ARG A 410 O LEU A 421 ? O LEU A 421 E 3 4 N ILE A 424 ? N ILE A 424 O SER A 475 ? O SER A 475 E 4 5 O VAL A 478 ? O VAL A 478 N THR A 447 ? N THR A 447 E 5 6 N TRP A 446 ? N TRP A 446 O VAL A 457 ? O VAL A 457 F 1 2 N GLY A 431 ? N GLY A 431 O THR A 469 ? O THR A 469 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NA 1001 ? 4 'BINDING SITE FOR RESIDUE NA A 1001' AC2 Software A NA 1002 ? 6 'BINDING SITE FOR RESIDUE NA A 1002' AC3 Software A NA 1003 ? 5 'BINDING SITE FOR RESIDUE NA A 1003' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ASN A 104 ? ASN A 104 . ? 1_555 ? 2 AC1 4 ASP A 194 ? ASP A 194 . ? 1_555 ? 3 AC1 4 ASN A 200 ? ASN A 200 . ? 1_555 ? 4 AC1 4 HIS A 235 ? HIS A 235 . ? 1_555 ? 5 AC2 6 GLY A 300 ? GLY A 300 . ? 1_555 ? 6 AC2 6 TYR A 302 ? TYR A 302 . ? 1_555 ? 7 AC2 6 TRP A 403 ? TRP A 403 . ? 1_555 ? 8 AC2 6 ASP A 404 ? ASP A 404 . ? 1_555 ? 9 AC2 6 ASN A 427 ? ASN A 427 . ? 1_555 ? 10 AC2 6 HOH E . ? HOH A 2018 . ? 1_555 ? 11 AC3 5 ASN A 289 ? ASN A 289 . ? 1_555 ? 12 AC3 5 VAL A 324 ? VAL A 324 . ? 1_555 ? 13 AC3 5 ASP A 325 ? ASP A 325 . ? 1_555 ? 14 AC3 5 SER A 337 ? SER A 337 . ? 1_555 ? 15 AC3 5 VAL A 339 ? VAL A 339 . ? 1_555 ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 416 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 417 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 417 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 128.49 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 9.19 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 11 ? ? 175.03 159.07 2 1 HIS A 14 ? ? -93.73 31.67 3 1 ASN A 17 ? ? -90.36 56.09 4 1 ALA A 29 ? ? -45.68 -72.71 5 1 LEU A 61 ? ? -56.23 -7.89 6 1 LEU A 64 ? ? -91.12 51.32 7 1 ASN A 124 ? ? -157.10 81.81 8 1 ARG A 125 ? ? -55.14 -7.58 9 1 TYR A 150 ? ? 71.21 -38.80 10 1 GLN A 170 ? ? 51.46 78.71 11 1 TYR A 193 ? ? -97.13 30.40 12 1 LEU A 196 ? ? -121.52 -63.75 13 1 ALA A 232 ? ? 39.14 29.63 14 1 ILE A 233 ? ? -56.43 -0.18 15 1 ASP A 266 ? ? -165.04 106.68 16 1 TRP A 279 ? ? 33.45 50.17 17 1 ASP A 285 ? ? -69.69 76.41 18 1 PRO A 317 ? ? -65.00 10.17 19 1 PRO A 331 ? ? -38.97 126.92 20 1 SER A 337 ? ? -171.15 44.67 21 1 ALA A 392 ? ? -67.75 74.05 22 1 TYR A 399 ? ? -145.28 55.08 23 1 ASP A 404 ? ? -121.06 -64.60 24 1 PRO A 417 ? ? -31.82 133.14 25 1 ASN A 418 ? ? 43.81 15.93 26 1 SER A 419 ? ? -59.22 -172.60 27 1 VAL A 437 ? ? -141.50 10.63 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id TYR _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 195 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.087 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 NA NA NA N N 236 PHE N N N N 237 PHE CA C N S 238 PHE C C N N 239 PHE O O N N 240 PHE CB C N N 241 PHE CG C Y N 242 PHE CD1 C Y N 243 PHE CD2 C Y N 244 PHE CE1 C Y N 245 PHE CE2 C Y N 246 PHE CZ C Y N 247 PHE OXT O N N 248 PHE H H N N 249 PHE H2 H N N 250 PHE HA H N N 251 PHE HB2 H N N 252 PHE HB3 H N N 253 PHE HD1 H N N 254 PHE HD2 H N N 255 PHE HE1 H N N 256 PHE HE2 H N N 257 PHE HZ H N N 258 PHE HXT H N N 259 PRO N N N N 260 PRO CA C N S 261 PRO C C N N 262 PRO O O N N 263 PRO CB C N N 264 PRO CG C N N 265 PRO CD C N N 266 PRO OXT O N N 267 PRO H H N N 268 PRO HA H N N 269 PRO HB2 H N N 270 PRO HB3 H N N 271 PRO HG2 H N N 272 PRO HG3 H N N 273 PRO HD2 H N N 274 PRO HD3 H N N 275 PRO HXT H N N 276 SER N N N N 277 SER CA C N S 278 SER C C N N 279 SER O O N N 280 SER CB C N N 281 SER OG O N N 282 SER OXT O N N 283 SER H H N N 284 SER H2 H N N 285 SER HA H N N 286 SER HB2 H N N 287 SER HB3 H N N 288 SER HG H N N 289 SER HXT H N N 290 THR N N N N 291 THR CA C N S 292 THR C C N N 293 THR O O N N 294 THR CB C N R 295 THR OG1 O N N 296 THR CG2 C N N 297 THR OXT O N N 298 THR H H N N 299 THR H2 H N N 300 THR HA H N N 301 THR HB H N N 302 THR HG1 H N N 303 THR HG21 H N N 304 THR HG22 H N N 305 THR HG23 H N N 306 THR HXT H N N 307 TRP N N N N 308 TRP CA C N S 309 TRP C C N N 310 TRP O O N N 311 TRP CB C N N 312 TRP CG C Y N 313 TRP CD1 C Y N 314 TRP CD2 C Y N 315 TRP NE1 N Y N 316 TRP CE2 C Y N 317 TRP CE3 C Y N 318 TRP CZ2 C Y N 319 TRP CZ3 C Y N 320 TRP CH2 C Y N 321 TRP OXT O N N 322 TRP H H N N 323 TRP H2 H N N 324 TRP HA H N N 325 TRP HB2 H N N 326 TRP HB3 H N N 327 TRP HD1 H N N 328 TRP HE1 H N N 329 TRP HE3 H N N 330 TRP HZ2 H N N 331 TRP HZ3 H N N 332 TRP HH2 H N N 333 TRP HXT H N N 334 TYR N N N N 335 TYR CA C N S 336 TYR C C N N 337 TYR O O N N 338 TYR CB C N N 339 TYR CG C Y N 340 TYR CD1 C Y N 341 TYR CD2 C Y N 342 TYR CE1 C Y N 343 TYR CE2 C Y N 344 TYR CZ C Y N 345 TYR OH O N N 346 TYR OXT O N N 347 TYR H H N N 348 TYR H2 H N N 349 TYR HA H N N 350 TYR HB2 H N N 351 TYR HB3 H N N 352 TYR HD1 H N N 353 TYR HD2 H N N 354 TYR HE1 H N N 355 TYR HE2 H N N 356 TYR HH H N N 357 TYR HXT H N N 358 VAL N N N N 359 VAL CA C N S 360 VAL C C N N 361 VAL O O N N 362 VAL CB C N N 363 VAL CG1 C N N 364 VAL CG2 C N N 365 VAL OXT O N N 366 VAL H H N N 367 VAL H2 H N N 368 VAL HA H N N 369 VAL HB H N N 370 VAL HG11 H N N 371 VAL HG12 H N N 372 VAL HG13 H N N 373 VAL HG21 H N N 374 VAL HG22 H N N 375 VAL HG23 H N N 376 VAL HXT H N N 377 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TRP N CA sing N N 293 TRP N H sing N N 294 TRP N H2 sing N N 295 TRP CA C sing N N 296 TRP CA CB sing N N 297 TRP CA HA sing N N 298 TRP C O doub N N 299 TRP C OXT sing N N 300 TRP CB CG sing N N 301 TRP CB HB2 sing N N 302 TRP CB HB3 sing N N 303 TRP CG CD1 doub Y N 304 TRP CG CD2 sing Y N 305 TRP CD1 NE1 sing Y N 306 TRP CD1 HD1 sing N N 307 TRP CD2 CE2 doub Y N 308 TRP CD2 CE3 sing Y N 309 TRP NE1 CE2 sing Y N 310 TRP NE1 HE1 sing N N 311 TRP CE2 CZ2 sing Y N 312 TRP CE3 CZ3 doub Y N 313 TRP CE3 HE3 sing N N 314 TRP CZ2 CH2 doub Y N 315 TRP CZ2 HZ2 sing N N 316 TRP CZ3 CH2 sing Y N 317 TRP CZ3 HZ3 sing N N 318 TRP CH2 HH2 sing N N 319 TRP OXT HXT sing N N 320 TYR N CA sing N N 321 TYR N H sing N N 322 TYR N H2 sing N N 323 TYR CA C sing N N 324 TYR CA CB sing N N 325 TYR CA HA sing N N 326 TYR C O doub N N 327 TYR C OXT sing N N 328 TYR CB CG sing N N 329 TYR CB HB2 sing N N 330 TYR CB HB3 sing N N 331 TYR CG CD1 doub Y N 332 TYR CG CD2 sing Y N 333 TYR CD1 CE1 sing Y N 334 TYR CD1 HD1 sing N N 335 TYR CD2 CE2 doub Y N 336 TYR CD2 HD2 sing N N 337 TYR CE1 CZ doub Y N 338 TYR CE1 HE1 sing N N 339 TYR CE2 CZ sing Y N 340 TYR CE2 HE2 sing N N 341 TYR CZ OH sing N N 342 TYR OH HH sing N N 343 TYR OXT HXT sing N N 344 VAL N CA sing N N 345 VAL N H sing N N 346 VAL N H2 sing N N 347 VAL CA C sing N N 348 VAL CA CB sing N N 349 VAL CA HA sing N N 350 VAL C O doub N N 351 VAL C OXT sing N N 352 VAL CB CG1 sing N N 353 VAL CB CG2 sing N N 354 VAL CB HB sing N N 355 VAL CG1 HG11 sing N N 356 VAL CG1 HG12 sing N N 357 VAL CG1 HG13 sing N N 358 VAL CG2 HG21 sing N N 359 VAL CG2 HG22 sing N N 360 VAL CG2 HG23 sing N N 361 VAL OXT HXT sing N N 362 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'Model of native AmyK38 structure' # _atom_sites.entry_id 1UD8 _atom_sites.fract_transf_matrix[1][1] 0.007544 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007544 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007544 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S # loop_