HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 11-JUN-03 1UG2 TITLE SOLUTION STRUCTURE OF MOUSE HYPOTHETICAL GENE (2610100B20RIK) PRODUCT TITLE 2 HOMOLOGOUS TO MYB DNA-BINDING DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2610100B20RIK GENE PRODUCT; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: MYB-LIKE DNA BINDING DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: RIKEN CDNA 2610100B20; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P020918-08; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS HYPOTHETICAL PROTEIN, MYB-LIKE DNA BINDING DOMAIN, STRUCTURAL KEYWDS 2 GENOMICS, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 3 UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.ZHAO,T.KIGAWA,N.TOCHIO,S.KOSHIBA,M.INOUE,M.SHIROUZU,T.TERADA, AUTHOR 2 T.YABUKI,M.AOKI,E.SEKI,T.MATSUDA,A.TANAKA,T.OSANAI,T.ARAKAWA, AUTHOR 3 P.CARNINCI,J.KAWAI,Y.HAYASHIZAKI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 4 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 27-DEC-23 1UG2 1 REMARK REVDAT 3 02-MAR-22 1UG2 1 REMARK REVDAT 2 24-FEB-09 1UG2 1 VERSN REVDAT 1 22-JUN-04 1UG2 0 JRNL AUTH C.ZHAO,T.KIGAWA,N.TOCHIO,S.KOSHIBA,M.INOUE,M.SHIROUZU, JRNL AUTH 2 T.TERADA,T.YABUKI,M.AOKI,E.SEKI,T.MATSUDA,A.TANAKA,T.OSANAI, JRNL AUTH 3 T.ARAKAWA,P.CARNINCI,J.KAWAI,Y.HAYASHIZAKI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF MOUSE HYPOTHETICAL GENE JRNL TITL 2 (2610100B20RIK) PRODUCT HOMOLOGOUS TO MYB DNA-BINDING DOMAIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 2.6, CYANA 1.0.7 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUENTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1UG2 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-JUN-03. REMARK 100 THE DEPOSITION ID IS D_1000005789. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.0 REMARK 210 PH : 7.5 REMARK 210 IONIC STRENGTH : 100MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20MM D-TRIS HCL, 100MM NACL, 1MM REMARK 210 D-DTT, 0.02% NAN3, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.811, CYANA 1.0.7 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR A 57 H VAL A 60 1.52 REMARK 500 O ILE A 44 H CYS A 48 1.53 REMARK 500 O VAL A 43 H MET A 47 1.54 REMARK 500 O HIS A 56 H SER A 59 1.55 REMARK 500 O GLU A 39 H VAL A 43 1.55 REMARK 500 O THR A 46 H GLU A 50 1.59 REMARK 500 O GLU A 79 H LEU A 83 1.59 REMARK 500 O ARG A 38 H ARG A 42 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 3 167.92 68.21 REMARK 500 1 SER A 6 160.89 64.71 REMARK 500 1 LEU A 11 162.08 61.35 REMARK 500 1 LYS A 25 -40.97 -173.12 REMARK 500 1 SER A 27 117.59 -176.28 REMARK 500 1 GLU A 31 115.61 62.90 REMARK 500 1 VAL A 34 -51.52 -159.86 REMARK 500 1 LEU A 35 -71.42 -152.62 REMARK 500 1 GLN A 49 -62.38 -90.50 REMARK 500 1 ASN A 67 19.10 -141.51 REMARK 500 1 LEU A 80 -70.33 -40.99 REMARK 500 1 ALA A 87 -76.31 69.26 REMARK 500 1 CYS A 88 71.80 61.47 REMARK 500 1 GLU A 89 81.20 54.80 REMARK 500 1 SER A 93 164.99 179.02 REMARK 500 2 SER A 5 169.72 179.04 REMARK 500 2 ALA A 10 79.50 -161.51 REMARK 500 2 LYS A 13 65.30 -173.02 REMARK 500 2 ALA A 14 126.33 -175.50 REMARK 500 2 GLU A 16 -59.82 -174.72 REMARK 500 2 ALA A 17 60.57 62.15 REMARK 500 2 SER A 24 166.58 56.67 REMARK 500 2 LYS A 25 55.12 -174.19 REMARK 500 2 SER A 28 137.45 174.43 REMARK 500 2 THR A 29 153.69 61.18 REMARK 500 2 LYS A 32 106.37 -48.98 REMARK 500 2 VAL A 34 53.55 -145.04 REMARK 500 2 LEU A 35 -53.94 -171.75 REMARK 500 2 GLN A 49 -64.64 -90.57 REMARK 500 2 ASN A 67 15.89 -140.44 REMARK 500 2 LEU A 80 -70.29 -43.91 REMARK 500 2 SER A 90 -62.31 -145.73 REMARK 500 3 SER A 3 174.38 64.20 REMARK 500 3 ALA A 10 -59.72 -141.86 REMARK 500 3 SER A 15 116.32 -176.95 REMARK 500 3 ALA A 17 113.30 -162.16 REMARK 500 3 ASN A 23 -55.59 -169.07 REMARK 500 3 GLU A 31 142.35 68.24 REMARK 500 3 LYS A 32 163.79 -45.45 REMARK 500 3 VAL A 34 51.62 -148.65 REMARK 500 3 LEU A 35 -64.45 -167.18 REMARK 500 3 LYS A 68 156.89 -48.71 REMARK 500 3 SER A 90 112.68 66.87 REMARK 500 4 LEU A 11 162.10 61.85 REMARK 500 4 ASN A 22 133.00 -177.56 REMARK 500 4 SER A 27 123.41 -175.46 REMARK 500 4 SER A 28 139.53 -177.25 REMARK 500 4 LYS A 32 78.56 59.44 REMARK 500 4 VAL A 34 -45.00 -178.28 REMARK 500 4 ALA A 53 76.00 -68.36 REMARK 500 REMARK 500 THIS ENTRY HAS 280 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMK001002130.1 RELATED DB: TARGETDB DBREF 1UG2 A 9 89 UNP Q9DB00 GON4_MOUSE 2148 2228 SEQRES 1 A 95 GLY PRO SER GLY SER SER GLY ALA GLY ALA LEU PRO LYS SEQRES 2 A 95 ALA SER GLU ALA THR VAL CYS ALA ASN ASN SER LYS VAL SEQRES 3 A 95 SER SER THR GLY GLU LYS VAL VAL LEU TRP THR ARG GLU SEQRES 4 A 95 ALA ASP ARG VAL ILE LEU THR MET CYS GLN GLU GLN GLY SEQRES 5 A 95 ALA GLN PRO HIS THR PHE SER VAL ILE SER GLN GLN LEU SEQRES 6 A 95 GLY ASN LYS THR PRO VAL GLU VAL SER HIS ARG PHE ARG SEQRES 7 A 95 GLU LEU MET GLN LEU PHE HIS THR ALA CYS GLU SER GLY SEQRES 8 A 95 PRO SER SER GLY HELIX 1 1 ARG A 38 GLU A 50 1 13 HELIX 2 2 PHE A 58 LEU A 65 1 8 HELIX 3 3 PRO A 70 THR A 86 1 17 CISPEP 1 LEU A 11 PRO A 12 1 -0.04 CISPEP 2 LEU A 11 PRO A 12 2 -0.04 CISPEP 3 LEU A 11 PRO A 12 3 0.05 CISPEP 4 LEU A 11 PRO A 12 4 0.08 CISPEP 5 LEU A 11 PRO A 12 5 -0.04 CISPEP 6 LEU A 11 PRO A 12 6 0.01 CISPEP 7 LEU A 11 PRO A 12 7 0.03 CISPEP 8 LEU A 11 PRO A 12 8 -0.01 CISPEP 9 LEU A 11 PRO A 12 9 -0.01 CISPEP 10 LEU A 11 PRO A 12 10 -0.05 CISPEP 11 LEU A 11 PRO A 12 11 -0.09 CISPEP 12 LEU A 11 PRO A 12 12 0.02 CISPEP 13 LEU A 11 PRO A 12 13 0.01 CISPEP 14 LEU A 11 PRO A 12 14 0.02 CISPEP 15 LEU A 11 PRO A 12 15 -0.01 CISPEP 16 LEU A 11 PRO A 12 16 0.03 CISPEP 17 LEU A 11 PRO A 12 17 0.02 CISPEP 18 LEU A 11 PRO A 12 18 -0.04 CISPEP 19 LEU A 11 PRO A 12 19 -0.01 CISPEP 20 LEU A 11 PRO A 12 20 -0.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1