HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 22-SEP-03 1UM1 TITLE SOLUTION STRUCTURE OF RSGI RUH-007, PDZ DOMAIN IN HUMAN CDNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: KIAA1849 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PDZ DOMAIN; COMPND 5 SYNONYM: RSGI RUH-007; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KAZUSA CDNA KIAA1849; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P021030-50; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS PDZ DOMAIN, HUMAN CDNA, STRUCTURAL GENOMICS, RIKEN STRUCTURAL KEYWDS 2 GENOMICS/PROTEOMICS INITIATIVE, RSGI, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR Y.DOI-KATAYAMA,F.HAYASHI,H.HIROTA,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 27-DEC-23 1UM1 1 REMARK REVDAT 3 02-MAR-22 1UM1 1 REMARK SEQADV REVDAT 2 24-FEB-09 1UM1 1 VERSN REVDAT 1 22-MAR-04 1UM1 0 JRNL AUTH Y.DOI-KATAYAMA,F.HAYASHI,H.HIROTA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RSGI RUH-007, A PDZ DOMAIN IN HUMAN JRNL TITL 2 CDNA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 1.0.7 REMARK 3 AUTHORS : VARIAN (VNMR), GUENTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1UM1 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-SEP-03. REMARK 100 THE DEPOSITION ID IS D_1000005975. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.7MM PDZ DOMAIN U-15N, 13C; REMARK 210 20MM TRIS-HCL (PH 7.0); 100MM REMARK 210 NACL; 0.02% NAN3; 90% H2O, 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.816, CYANA 1.0.7 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H ASN A 65 O ARG A 89 1.53 REMARK 500 O ASP A 79 H HIS A 83 1.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 -58.36 -143.93 REMARK 500 1 SER A 3 156.33 62.50 REMARK 500 1 SER A 5 143.72 67.08 REMARK 500 1 ARG A 16 105.80 -38.68 REMARK 500 1 LEU A 21 -137.23 81.39 REMARK 500 1 LEU A 44 151.06 -41.17 REMARK 500 1 ASP A 59 155.83 -40.44 REMARK 500 1 LEU A 69 46.96 -104.79 REMARK 500 1 HIS A 83 35.78 -91.35 REMARK 500 1 LYS A 94 97.23 -66.70 REMARK 500 1 SER A 105 91.45 58.79 REMARK 500 1 SER A 108 113.49 59.72 REMARK 500 2 SER A 2 -58.43 -155.90 REMARK 500 2 ARG A 16 137.77 -38.30 REMARK 500 2 LEU A 21 -135.99 81.55 REMARK 500 2 LEU A 44 154.87 -48.31 REMARK 500 2 PRO A 45 -73.21 -75.00 REMARK 500 2 ASP A 59 154.65 -43.26 REMARK 500 2 HIS A 83 35.57 -91.35 REMARK 500 2 LYS A 86 -77.96 64.57 REMARK 500 3 SER A 2 126.04 63.31 REMARK 500 3 ARG A 16 101.50 -38.33 REMARK 500 3 LEU A 21 -160.56 77.86 REMARK 500 3 PRO A 45 -88.06 -75.00 REMARK 500 3 LEU A 55 102.56 -55.95 REMARK 500 3 LEU A 69 60.13 -107.30 REMARK 500 3 LEU A 70 -71.99 -104.60 REMARK 500 3 HIS A 83 35.86 -91.52 REMARK 500 3 LYS A 86 -61.59 69.31 REMARK 500 3 LYS A 94 96.82 -68.20 REMARK 500 3 SER A 108 -66.89 -103.56 REMARK 500 4 SER A 2 114.07 -172.31 REMARK 500 4 SER A 3 -60.91 -177.16 REMARK 500 4 SER A 5 -63.67 -127.16 REMARK 500 4 ARG A 16 103.12 -42.22 REMARK 500 4 LEU A 21 -165.03 80.11 REMARK 500 4 PRO A 45 -75.38 -74.97 REMARK 500 4 ASP A 59 174.90 -57.56 REMARK 500 4 LEU A 69 52.20 -92.71 REMARK 500 4 HIS A 83 35.33 -91.49 REMARK 500 4 SER A 108 92.66 43.23 REMARK 500 5 SER A 2 -63.84 -104.53 REMARK 500 5 SER A 3 97.30 -174.83 REMARK 500 5 ARG A 16 106.63 -38.60 REMARK 500 5 LEU A 21 -133.30 76.32 REMARK 500 5 LEU A 44 156.11 -49.29 REMARK 500 5 LEU A 55 108.29 -39.40 REMARK 500 5 ASP A 59 160.78 -41.12 REMARK 500 5 HIS A 83 35.79 -91.73 REMARK 500 5 SER A 105 97.04 48.57 REMARK 500 REMARK 500 THIS ENTRY HAS 181 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002001816.1 RELATED DB: TARGETDB DBREF 1UM1 A 8 104 UNP Q96JH8 K1849_HUMAN 1012 1108 SEQADV 1UM1 GLY A 1 UNP Q96JH8 CLONING ARTIFACT SEQADV 1UM1 SER A 2 UNP Q96JH8 CLONING ARTIFACT SEQADV 1UM1 SER A 3 UNP Q96JH8 CLONING ARTIFACT SEQADV 1UM1 GLY A 4 UNP Q96JH8 CLONING ARTIFACT SEQADV 1UM1 SER A 5 UNP Q96JH8 CLONING ARTIFACT SEQADV 1UM1 SER A 6 UNP Q96JH8 CLONING ARTIFACT SEQADV 1UM1 GLY A 7 UNP Q96JH8 CLONING ARTIFACT SEQADV 1UM1 SER A 105 UNP Q96JH8 CLONING ARTIFACT SEQADV 1UM1 GLY A 106 UNP Q96JH8 CLONING ARTIFACT SEQADV 1UM1 PRO A 107 UNP Q96JH8 CLONING ARTIFACT SEQADV 1UM1 SER A 108 UNP Q96JH8 CLONING ARTIFACT SEQADV 1UM1 SER A 109 UNP Q96JH8 CLONING ARTIFACT SEQADV 1UM1 GLY A 110 UNP Q96JH8 CLONING ARTIFACT SEQRES 1 A 110 GLY SER SER GLY SER SER GLY TYR VAL PHE THR VAL GLU SEQRES 2 A 110 LEU GLU ARG GLY PRO SER GLY LEU GLY MET GLY LEU ILE SEQRES 3 A 110 ASP GLY MET HIS THR HIS LEU GLY ALA PRO GLY LEU TYR SEQRES 4 A 110 ILE GLN THR LEU LEU PRO GLY SER PRO ALA ALA ALA ASP SEQRES 5 A 110 GLY ARG LEU SER LEU GLY ASP ARG ILE LEU GLU VAL ASN SEQRES 6 A 110 GLY SER SER LEU LEU GLY LEU GLY TYR LEU ARG ALA VAL SEQRES 7 A 110 ASP LEU ILE ARG HIS GLY GLY LYS LYS MET ARG PHE LEU SEQRES 8 A 110 VAL ALA LYS SER ASP VAL GLU THR ALA LYS LYS ILE HIS SEQRES 9 A 110 SER GLY PRO SER SER GLY HELIX 1 1 PRO A 48 ASP A 52 1 5 HELIX 2 1 TYR A 74 ARG A 82 1 9 HELIX 3 1 VAL A 97 ILE A 103 1 7 SHEET 1 A 3 VAL A 9 GLU A 15 0 SHEET 2 A 3 LYS A 87 ALA A 93 -1 O MET A 88 N LEU A 14 SHEET 3 A 3 ARG A 60 VAL A 64 -1 N ARG A 60 O ALA A 93 SHEET 1 B 2 MET A 23 ASP A 27 0 SHEET 2 B 2 LEU A 38 LEU A 43 -1 O TYR A 39 N ILE A 26 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1