HEADER POLYMERASE 21-JAN-04 1UVJ TITLE THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2 INHIBITION OF AN RNA- TITLE 2 DEPENDENT RNA POLYMERASE PHI6P2 WITH 7NT RNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-DIRECTED RNA POLYMERASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: PROTEIN P2; COMPND 5 EC: 2.7.7.48; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 5'-R(*UP*UP*CP*CP)-3'; COMPND 9 CHAIN: D, E, F; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PHAGE PHI6; SOURCE 3 ORGANISM_COMMON: BACTERIOPHAGE PHI-6; SOURCE 4 ORGANISM_TAXID: 10879; SOURCE 5 GENE: P2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630; SOURCE 12 OTHER_DETAILS: COMMERCIALLY SUPPLIED BY OSWELL LTD KEYWDS POLYMERASE-COMPLEX, RNA-DEPENDENT RNA POLYMERASE, OLIGONUCLEOTIDE, KEYWDS 2 POLYMERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.S.SALGADO,E.V.MAKEYEV,S.BUTCHER,D.BAMFORD,D.I.STUART,J.M.GRIMES REVDAT 4 13-DEC-23 1UVJ 1 LINK REVDAT 3 07-MAR-18 1UVJ 1 TITLE COMPND SOURCE JRNL REVDAT 3 2 1 DBREF SEQADV REVDAT 2 24-FEB-09 1UVJ 1 VERSN REVDAT 1 19-FEB-04 1UVJ 0 JRNL AUTH P.S.SALGADO,E.V.MAKEYEV,S.J.BUTCHER,D.H.BAMFORD,D.I.STUART, JRNL AUTH 2 J.M.GRIMES JRNL TITL THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2+ INHIBITION JRNL TITL 2 OF AN RNA-DEPENDENT RNA POLYMERASE. JRNL REF STRUCTURE V. 12 307 2004 JRNL REFN ISSN 0969-2126 JRNL PMID 14962391 JRNL DOI 10.1016/J.STR.2004.01.012 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.74 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2603739.230 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 209435 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.242 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 10430 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 32929 REMARK 3 BIN R VALUE (WORKING SET) : 0.3390 REMARK 3 BIN FREE R VALUE : 0.3590 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 1740 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.009 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 15795 REMARK 3 NUCLEIC ACID ATOMS : 231 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 604 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.88000 REMARK 3 B22 (A**2) : 10.87000 REMARK 3 B33 (A**2) : -8.99000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -4.16000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.28 REMARK 3 ESD FROM SIGMAA (A) : 0.31 REMARK 3 LOW RESOLUTION CUTOFF (A) : 20.0 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.34 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.040 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.530 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.250 ; 4.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 4.000 ; 4.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 5.310 ; 5.000 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 44.00 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED. 7NT RNA OLIGO REMARK 3 WAS CRYSTALIZED, ONLY 4NT TRACEABLE IN ED MAPS REMARK 4 REMARK 4 1UVJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-JAN-04. REMARK 100 THE DEPOSITION ID IS D_1290013627. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JAN-02 REMARK 200 TEMPERATURE (KELVIN) : 150.0 REMARK 200 PH : 7.30 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 209435 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.200 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1HHS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM HEPES PH7.3, 13% PEG 20000, 2MM REMARK 280 MNCL2, 2% EG, 0.036MG PROTEIN INCUBATED WITH 0.006MM 7NT RNA, PH REMARK 280 7.30 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 46.75500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE POLYMERASE IS A MONOMER IN SOLUTION, REMARK 300 BUT SINCEIT IS IN COMPLEX WITH RNA IN THIS REMARK 300 ENTRY, THE OLIGOMERIS ANNOTATED AS A DIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 P2 IS ONE OF THE 4 STRUCTURAL PROTEINS OF THE REMARK 400 POLYHEDRAL PROCAPSID, WHICH IS RESPONSIBLE FOR GENOMIC REMARK 400 REPLICATION AND TRANSCRIPTION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 U D 1 REMARK 465 U D 2 REMARK 465 U D 3 REMARK 465 U E 1 REMARK 465 U E 2 REMARK 465 U E 3 REMARK 465 U F 1 REMARK 465 U F 2 REMARK 465 U F 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 U D 4 P OP1 OP2 REMARK 470 U E 4 P OP1 OP2 REMARK 470 U F 4 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG B 2 O HOH B 2003 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 88 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 GLN A 206 N - CA - C ANGL. DEV. = -19.5 DEGREES REMARK 500 LEU A 404 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 ARG A 587 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG B 3 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG B 88 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 GLN B 206 N - CA - C ANGL. DEV. = -20.6 DEGREES REMARK 500 GLN C 206 N - CA - C ANGL. DEV. = -22.1 DEGREES REMARK 500 LEU C 404 CA - CB - CG ANGL. DEV. = 14.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 2 118.87 62.94 REMARK 500 ASP A 137 67.83 -113.76 REMARK 500 CYS A 152 -141.69 50.19 REMARK 500 SER A 296 -70.14 -100.41 REMARK 500 THR A 305 -86.97 -121.01 REMARK 500 ASP A 327 59.52 37.68 REMARK 500 ASN A 384 84.62 -151.21 REMARK 500 ASP A 386 27.40 -150.47 REMARK 500 THR A 418 -21.74 -143.10 REMARK 500 LYS A 451 115.61 -161.32 REMARK 500 SER A 452 -122.64 47.34 REMARK 500 ASP A 504 -158.58 -106.74 REMARK 500 SER A 604 23.29 -79.38 REMARK 500 ARG A 607 4.28 -51.09 REMARK 500 GLN A 608 28.06 -173.20 REMARK 500 ASP A 624 83.07 -152.90 REMARK 500 TYR A 630 -19.98 -147.26 REMARK 500 ARG B 2 113.95 65.46 REMARK 500 ASP B 137 65.36 -112.53 REMARK 500 CYS B 152 -144.46 52.65 REMARK 500 SER B 296 -70.69 -105.39 REMARK 500 THR B 305 -86.67 -117.96 REMARK 500 ASP B 327 59.09 37.73 REMARK 500 ASP B 386 23.92 -143.19 REMARK 500 THR B 418 -21.48 -140.53 REMARK 500 LYS B 451 110.55 -161.91 REMARK 500 SER B 452 -121.83 51.24 REMARK 500 ASP B 504 -162.39 -103.29 REMARK 500 SER B 604 21.75 -77.40 REMARK 500 ARG B 607 3.72 -51.25 REMARK 500 GLN B 608 26.41 -172.76 REMARK 500 TYR B 630 -21.43 -149.27 REMARK 500 ARG C 2 118.33 74.02 REMARK 500 ASP C 137 70.19 -107.44 REMARK 500 CYS C 152 -142.52 54.47 REMARK 500 SER C 296 -70.87 -102.99 REMARK 500 THR C 305 -87.07 -122.66 REMARK 500 ASP C 327 61.06 39.52 REMARK 500 ASN C 384 82.88 -152.11 REMARK 500 ASP C 386 24.31 -148.08 REMARK 500 THR C 418 -25.28 -141.22 REMARK 500 LYS C 451 112.53 -161.83 REMARK 500 SER C 452 -123.09 52.03 REMARK 500 ASP C 504 -155.84 -102.82 REMARK 500 SER C 604 23.00 -78.72 REMARK 500 ALA C 606 151.16 -47.47 REMARK 500 ARG C 607 2.14 -52.84 REMARK 500 GLN C 608 29.49 -173.35 REMARK 500 TYR C 630 -22.32 -151.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1665 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 454 OD1 REMARK 620 2 GLU A 491 OE1 170.5 REMARK 620 3 ALA A 495 O 100.1 89.3 REMARK 620 4 HOH A2179 O 90.2 89.0 96.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1665 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 454 OD1 REMARK 620 2 GLU B 491 OE1 175.4 REMARK 620 3 ALA B 495 O 98.1 86.5 REMARK 620 4 HOH B2269 O 85.6 89.8 176.0 REMARK 620 5 HOH B2270 O 90.2 89.8 93.4 88.3 REMARK 620 6 HOH B2271 O 93.3 86.0 94.5 83.6 170.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C1665 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 454 OD1 REMARK 620 2 GLU C 491 OE1 177.2 REMARK 620 3 ALA C 495 O 96.8 85.2 REMARK 620 4 HOH C2150 O 95.4 82.5 94.8 REMARK 620 5 HOH C2151 O 92.9 85.2 170.2 85.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A1665 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B1665 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C1665 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1HHS RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 REMARK 900 RELATED ID: 1HHT RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 PLUS REMARK 900 TEMPLATE REMARK 900 RELATED ID: 1HI0 RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 PLUS REMARK 900 INITIATION COMPLEX REMARK 900 RELATED ID: 1HI1 RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 PLUS REMARK 900 BOUND NTP REMARK 900 RELATED ID: 1HI8 RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 REMARK 900 RELATED ID: 1UVJ RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2 INHIBITION OF AN REMARK 900 RNA-DEPENDENT RNA POLYMERASE PHI6P2 WITH 7NT RNA REMARK 900 RELATED ID: 1UVK RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2 INHIBITION OF AN REMARK 900 RNA-DEPENDENT RNA POLYMERASE PHI6P2 DEAD-END COMPLEX REMARK 900 RELATED ID: 1UVL RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2 INHIBITION OF AN REMARK 900 RNA-DEPENDENT RNA POLYMERASE PHI6P2 WITH 5NT RNA CONFORMATION B REMARK 900 RELATED ID: 1UVM RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2 INHIBITION OF AN REMARK 900 RNA-DEPENDENT RNA POLYMERASE PHI6P2 5NT CONFORMATION A REMARK 900 RELATED ID: 1UVN RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2 INHIBITION OF AN REMARK 900 RNA-DEPENDENT RNA POLYMERASE PHI6P2 CA2+ INHIBITION COMPLEX DBREF 1UVJ A 1 664 UNP P11124 RDRP_BPPH6 2 665 DBREF 1UVJ B 1 664 UNP P11124 RDRP_BPPH6 2 665 DBREF 1UVJ C 1 664 UNP P11124 RDRP_BPPH6 2 665 DBREF 1UVJ D 1 7 PDB 1UVJ 1UVJ 1 7 DBREF 1UVJ E 1 7 PDB 1UVJ 1UVJ 1 7 DBREF 1UVJ F 1 7 PDB 1UVJ 1UVJ 1 7 SEQADV 1UVJ MET A 456 UNP P11124 ILE 457 CONFLICT SEQADV 1UVJ MET B 456 UNP P11124 ILE 457 CONFLICT SEQADV 1UVJ MET C 456 UNP P11124 ILE 457 CONFLICT SEQRES 1 A 664 PRO ARG ARG ALA PRO ALA PHE PRO LEU SER ASP ILE LYS SEQRES 2 A 664 ALA GLN MET LEU PHE ALA ASN ASN ILE LYS ALA GLN GLN SEQRES 3 A 664 ALA SER LYS ARG SER PHE LYS GLU GLY ALA ILE GLU THR SEQRES 4 A 664 TYR GLU GLY LEU LEU SER VAL ASP PRO ARG PHE LEU SER SEQRES 5 A 664 PHE LYS ASN GLU LEU SER ARG TYR LEU THR ASP HIS PHE SEQRES 6 A 664 PRO ALA ASN VAL ASP GLU TYR GLY ARG VAL TYR GLY ASN SEQRES 7 A 664 GLY VAL ARG THR ASN PHE PHE GLY MET ARG HIS MET ASN SEQRES 8 A 664 GLY PHE PRO MET ILE PRO ALA THR TRP PRO LEU ALA SER SEQRES 9 A 664 ASN LEU LYS LYS ARG ALA ASP ALA ASP LEU ALA ASP GLY SEQRES 10 A 664 PRO VAL SER GLU ARG ASP ASN LEU LEU PHE ARG ALA ALA SEQRES 11 A 664 VAL ARG LEU MET PHE SER ASP LEU GLU PRO VAL PRO LEU SEQRES 12 A 664 LYS ILE ARG LYS GLY SER SER THR CYS ILE PRO TYR PHE SEQRES 13 A 664 SER ASN ASP MET GLY THR LYS ILE GLU ILE ALA GLU ARG SEQRES 14 A 664 ALA LEU GLU LYS ALA GLU GLU ALA GLY ASN LEU MET LEU SEQRES 15 A 664 GLN GLY LYS PHE ASP ASP ALA TYR GLN LEU HIS GLN MET SEQRES 16 A 664 GLY GLY ALA TYR TYR VAL VAL TYR ARG ALA GLN SER THR SEQRES 17 A 664 ASP ALA ILE THR LEU ASP PRO LYS THR GLY LYS PHE VAL SEQRES 18 A 664 SER LYS ASP ARG MET VAL ALA ASP PHE GLU TYR ALA VAL SEQRES 19 A 664 THR GLY GLY GLU GLN GLY SER LEU PHE ALA ALA SER LYS SEQRES 20 A 664 ASP ALA SER ARG LEU LYS GLU GLN TYR GLY ILE ASP VAL SEQRES 21 A 664 PRO ASP GLY PHE PHE CYS GLU ARG ARG ARG THR ALA MET SEQRES 22 A 664 GLY GLY PRO PHE ALA LEU ASN ALA PRO ILE MET ALA VAL SEQRES 23 A 664 ALA GLN PRO VAL ARG ASN LYS ILE TYR SER LYS TYR ALA SEQRES 24 A 664 TYR THR PHE HIS HIS THR THR ARG LEU ASN LYS GLU GLU SEQRES 25 A 664 LYS VAL LYS GLU TRP SER LEU CYS VAL ALA THR ASP VAL SEQRES 26 A 664 SER ASP HIS ASP THR PHE TRP PRO GLY TRP LEU ARG ASP SEQRES 27 A 664 LEU ILE CYS ASP GLU LEU LEU ASN MET GLY TYR ALA PRO SEQRES 28 A 664 TRP TRP VAL LYS LEU PHE GLU THR SER LEU LYS LEU PRO SEQRES 29 A 664 VAL TYR VAL GLY ALA PRO ALA PRO GLU GLN GLY HIS THR SEQRES 30 A 664 LEU LEU GLY ASP PRO SER ASN PRO ASP LEU GLU VAL GLY SEQRES 31 A 664 LEU SER SER GLY GLN GLY ALA THR ASP LEU MET GLY THR SEQRES 32 A 664 LEU LEU MET SER ILE THR TYR LEU VAL MET GLN LEU ASP SEQRES 33 A 664 HIS THR ALA PRO HIS LEU ASN SER ARG ILE LYS ASP MET SEQRES 34 A 664 PRO SER ALA CYS ARG PHE LEU ASP SER TYR TRP GLN GLY SEQRES 35 A 664 HIS GLU GLU ILE ARG GLN ILE SER LYS SER ASP ASP ALA SEQRES 36 A 664 MET LEU GLY TRP THR LYS GLY ARG ALA LEU VAL GLY GLY SEQRES 37 A 664 HIS ARG LEU PHE GLU MET LEU LYS GLU GLY LYS VAL ASN SEQRES 38 A 664 PRO SER PRO TYR MET LYS ILE SER TYR GLU HIS GLY GLY SEQRES 39 A 664 ALA PHE LEU GLY ASP ILE LEU LEU TYR ASP SER ARG ARG SEQRES 40 A 664 GLU PRO GLY SER ALA ILE PHE VAL GLY ASN ILE ASN SER SEQRES 41 A 664 MET LEU ASN ASN GLN PHE SER PRO GLU TYR GLY VAL GLN SEQRES 42 A 664 SER GLY VAL ARG ASP ARG SER LYS ARG LYS ARG PRO PHE SEQRES 43 A 664 PRO GLY LEU ALA TRP ALA SER MET LYS ASP THR TYR GLY SEQRES 44 A 664 ALA CYS PRO ILE TYR SER ASP VAL LEU GLU ALA ILE GLU SEQRES 45 A 664 ARG CYS TRP TRP ASN ALA PHE GLY GLU SER TYR ARG ALA SEQRES 46 A 664 TYR ARG GLU ASP MET LEU LYS ARG ASP THR LEU GLU LEU SEQRES 47 A 664 SER ARG TYR VAL ALA SER MET ALA ARG GLN ALA GLY LEU SEQRES 48 A 664 ALA GLU LEU THR PRO ILE ASP LEU GLU VAL LEU ALA ASP SEQRES 49 A 664 PRO ASN LYS LEU GLN TYR LYS TRP THR GLU ALA ASP VAL SEQRES 50 A 664 SER ALA ASN ILE HIS GLU VAL LEU MET HIS GLY VAL SER SEQRES 51 A 664 VAL GLU LYS THR GLU ARG PHE LEU ARG SER VAL MET PRO SEQRES 52 A 664 ARG SEQRES 1 B 664 PRO ARG ARG ALA PRO ALA PHE PRO LEU SER ASP ILE LYS SEQRES 2 B 664 ALA GLN MET LEU PHE ALA ASN ASN ILE LYS ALA GLN GLN SEQRES 3 B 664 ALA SER LYS ARG SER PHE LYS GLU GLY ALA ILE GLU THR SEQRES 4 B 664 TYR GLU GLY LEU LEU SER VAL ASP PRO ARG PHE LEU SER SEQRES 5 B 664 PHE LYS ASN GLU LEU SER ARG TYR LEU THR ASP HIS PHE SEQRES 6 B 664 PRO ALA ASN VAL ASP GLU TYR GLY ARG VAL TYR GLY ASN SEQRES 7 B 664 GLY VAL ARG THR ASN PHE PHE GLY MET ARG HIS MET ASN SEQRES 8 B 664 GLY PHE PRO MET ILE PRO ALA THR TRP PRO LEU ALA SER SEQRES 9 B 664 ASN LEU LYS LYS ARG ALA ASP ALA ASP LEU ALA ASP GLY SEQRES 10 B 664 PRO VAL SER GLU ARG ASP ASN LEU LEU PHE ARG ALA ALA SEQRES 11 B 664 VAL ARG LEU MET PHE SER ASP LEU GLU PRO VAL PRO LEU SEQRES 12 B 664 LYS ILE ARG LYS GLY SER SER THR CYS ILE PRO TYR PHE SEQRES 13 B 664 SER ASN ASP MET GLY THR LYS ILE GLU ILE ALA GLU ARG SEQRES 14 B 664 ALA LEU GLU LYS ALA GLU GLU ALA GLY ASN LEU MET LEU SEQRES 15 B 664 GLN GLY LYS PHE ASP ASP ALA TYR GLN LEU HIS GLN MET SEQRES 16 B 664 GLY GLY ALA TYR TYR VAL VAL TYR ARG ALA GLN SER THR SEQRES 17 B 664 ASP ALA ILE THR LEU ASP PRO LYS THR GLY LYS PHE VAL SEQRES 18 B 664 SER LYS ASP ARG MET VAL ALA ASP PHE GLU TYR ALA VAL SEQRES 19 B 664 THR GLY GLY GLU GLN GLY SER LEU PHE ALA ALA SER LYS SEQRES 20 B 664 ASP ALA SER ARG LEU LYS GLU GLN TYR GLY ILE ASP VAL SEQRES 21 B 664 PRO ASP GLY PHE PHE CYS GLU ARG ARG ARG THR ALA MET SEQRES 22 B 664 GLY GLY PRO PHE ALA LEU ASN ALA PRO ILE MET ALA VAL SEQRES 23 B 664 ALA GLN PRO VAL ARG ASN LYS ILE TYR SER LYS TYR ALA SEQRES 24 B 664 TYR THR PHE HIS HIS THR THR ARG LEU ASN LYS GLU GLU SEQRES 25 B 664 LYS VAL LYS GLU TRP SER LEU CYS VAL ALA THR ASP VAL SEQRES 26 B 664 SER ASP HIS ASP THR PHE TRP PRO GLY TRP LEU ARG ASP SEQRES 27 B 664 LEU ILE CYS ASP GLU LEU LEU ASN MET GLY TYR ALA PRO SEQRES 28 B 664 TRP TRP VAL LYS LEU PHE GLU THR SER LEU LYS LEU PRO SEQRES 29 B 664 VAL TYR VAL GLY ALA PRO ALA PRO GLU GLN GLY HIS THR SEQRES 30 B 664 LEU LEU GLY ASP PRO SER ASN PRO ASP LEU GLU VAL GLY SEQRES 31 B 664 LEU SER SER GLY GLN GLY ALA THR ASP LEU MET GLY THR SEQRES 32 B 664 LEU LEU MET SER ILE THR TYR LEU VAL MET GLN LEU ASP SEQRES 33 B 664 HIS THR ALA PRO HIS LEU ASN SER ARG ILE LYS ASP MET SEQRES 34 B 664 PRO SER ALA CYS ARG PHE LEU ASP SER TYR TRP GLN GLY SEQRES 35 B 664 HIS GLU GLU ILE ARG GLN ILE SER LYS SER ASP ASP ALA SEQRES 36 B 664 MET LEU GLY TRP THR LYS GLY ARG ALA LEU VAL GLY GLY SEQRES 37 B 664 HIS ARG LEU PHE GLU MET LEU LYS GLU GLY LYS VAL ASN SEQRES 38 B 664 PRO SER PRO TYR MET LYS ILE SER TYR GLU HIS GLY GLY SEQRES 39 B 664 ALA PHE LEU GLY ASP ILE LEU LEU TYR ASP SER ARG ARG SEQRES 40 B 664 GLU PRO GLY SER ALA ILE PHE VAL GLY ASN ILE ASN SER SEQRES 41 B 664 MET LEU ASN ASN GLN PHE SER PRO GLU TYR GLY VAL GLN SEQRES 42 B 664 SER GLY VAL ARG ASP ARG SER LYS ARG LYS ARG PRO PHE SEQRES 43 B 664 PRO GLY LEU ALA TRP ALA SER MET LYS ASP THR TYR GLY SEQRES 44 B 664 ALA CYS PRO ILE TYR SER ASP VAL LEU GLU ALA ILE GLU SEQRES 45 B 664 ARG CYS TRP TRP ASN ALA PHE GLY GLU SER TYR ARG ALA SEQRES 46 B 664 TYR ARG GLU ASP MET LEU LYS ARG ASP THR LEU GLU LEU SEQRES 47 B 664 SER ARG TYR VAL ALA SER MET ALA ARG GLN ALA GLY LEU SEQRES 48 B 664 ALA GLU LEU THR PRO ILE ASP LEU GLU VAL LEU ALA ASP SEQRES 49 B 664 PRO ASN LYS LEU GLN TYR LYS TRP THR GLU ALA ASP VAL SEQRES 50 B 664 SER ALA ASN ILE HIS GLU VAL LEU MET HIS GLY VAL SER SEQRES 51 B 664 VAL GLU LYS THR GLU ARG PHE LEU ARG SER VAL MET PRO SEQRES 52 B 664 ARG SEQRES 1 C 664 PRO ARG ARG ALA PRO ALA PHE PRO LEU SER ASP ILE LYS SEQRES 2 C 664 ALA GLN MET LEU PHE ALA ASN ASN ILE LYS ALA GLN GLN SEQRES 3 C 664 ALA SER LYS ARG SER PHE LYS GLU GLY ALA ILE GLU THR SEQRES 4 C 664 TYR GLU GLY LEU LEU SER VAL ASP PRO ARG PHE LEU SER SEQRES 5 C 664 PHE LYS ASN GLU LEU SER ARG TYR LEU THR ASP HIS PHE SEQRES 6 C 664 PRO ALA ASN VAL ASP GLU TYR GLY ARG VAL TYR GLY ASN SEQRES 7 C 664 GLY VAL ARG THR ASN PHE PHE GLY MET ARG HIS MET ASN SEQRES 8 C 664 GLY PHE PRO MET ILE PRO ALA THR TRP PRO LEU ALA SER SEQRES 9 C 664 ASN LEU LYS LYS ARG ALA ASP ALA ASP LEU ALA ASP GLY SEQRES 10 C 664 PRO VAL SER GLU ARG ASP ASN LEU LEU PHE ARG ALA ALA SEQRES 11 C 664 VAL ARG LEU MET PHE SER ASP LEU GLU PRO VAL PRO LEU SEQRES 12 C 664 LYS ILE ARG LYS GLY SER SER THR CYS ILE PRO TYR PHE SEQRES 13 C 664 SER ASN ASP MET GLY THR LYS ILE GLU ILE ALA GLU ARG SEQRES 14 C 664 ALA LEU GLU LYS ALA GLU GLU ALA GLY ASN LEU MET LEU SEQRES 15 C 664 GLN GLY LYS PHE ASP ASP ALA TYR GLN LEU HIS GLN MET SEQRES 16 C 664 GLY GLY ALA TYR TYR VAL VAL TYR ARG ALA GLN SER THR SEQRES 17 C 664 ASP ALA ILE THR LEU ASP PRO LYS THR GLY LYS PHE VAL SEQRES 18 C 664 SER LYS ASP ARG MET VAL ALA ASP PHE GLU TYR ALA VAL SEQRES 19 C 664 THR GLY GLY GLU GLN GLY SER LEU PHE ALA ALA SER LYS SEQRES 20 C 664 ASP ALA SER ARG LEU LYS GLU GLN TYR GLY ILE ASP VAL SEQRES 21 C 664 PRO ASP GLY PHE PHE CYS GLU ARG ARG ARG THR ALA MET SEQRES 22 C 664 GLY GLY PRO PHE ALA LEU ASN ALA PRO ILE MET ALA VAL SEQRES 23 C 664 ALA GLN PRO VAL ARG ASN LYS ILE TYR SER LYS TYR ALA SEQRES 24 C 664 TYR THR PHE HIS HIS THR THR ARG LEU ASN LYS GLU GLU SEQRES 25 C 664 LYS VAL LYS GLU TRP SER LEU CYS VAL ALA THR ASP VAL SEQRES 26 C 664 SER ASP HIS ASP THR PHE TRP PRO GLY TRP LEU ARG ASP SEQRES 27 C 664 LEU ILE CYS ASP GLU LEU LEU ASN MET GLY TYR ALA PRO SEQRES 28 C 664 TRP TRP VAL LYS LEU PHE GLU THR SER LEU LYS LEU PRO SEQRES 29 C 664 VAL TYR VAL GLY ALA PRO ALA PRO GLU GLN GLY HIS THR SEQRES 30 C 664 LEU LEU GLY ASP PRO SER ASN PRO ASP LEU GLU VAL GLY SEQRES 31 C 664 LEU SER SER GLY GLN GLY ALA THR ASP LEU MET GLY THR SEQRES 32 C 664 LEU LEU MET SER ILE THR TYR LEU VAL MET GLN LEU ASP SEQRES 33 C 664 HIS THR ALA PRO HIS LEU ASN SER ARG ILE LYS ASP MET SEQRES 34 C 664 PRO SER ALA CYS ARG PHE LEU ASP SER TYR TRP GLN GLY SEQRES 35 C 664 HIS GLU GLU ILE ARG GLN ILE SER LYS SER ASP ASP ALA SEQRES 36 C 664 MET LEU GLY TRP THR LYS GLY ARG ALA LEU VAL GLY GLY SEQRES 37 C 664 HIS ARG LEU PHE GLU MET LEU LYS GLU GLY LYS VAL ASN SEQRES 38 C 664 PRO SER PRO TYR MET LYS ILE SER TYR GLU HIS GLY GLY SEQRES 39 C 664 ALA PHE LEU GLY ASP ILE LEU LEU TYR ASP SER ARG ARG SEQRES 40 C 664 GLU PRO GLY SER ALA ILE PHE VAL GLY ASN ILE ASN SER SEQRES 41 C 664 MET LEU ASN ASN GLN PHE SER PRO GLU TYR GLY VAL GLN SEQRES 42 C 664 SER GLY VAL ARG ASP ARG SER LYS ARG LYS ARG PRO PHE SEQRES 43 C 664 PRO GLY LEU ALA TRP ALA SER MET LYS ASP THR TYR GLY SEQRES 44 C 664 ALA CYS PRO ILE TYR SER ASP VAL LEU GLU ALA ILE GLU SEQRES 45 C 664 ARG CYS TRP TRP ASN ALA PHE GLY GLU SER TYR ARG ALA SEQRES 46 C 664 TYR ARG GLU ASP MET LEU LYS ARG ASP THR LEU GLU LEU SEQRES 47 C 664 SER ARG TYR VAL ALA SER MET ALA ARG GLN ALA GLY LEU SEQRES 48 C 664 ALA GLU LEU THR PRO ILE ASP LEU GLU VAL LEU ALA ASP SEQRES 49 C 664 PRO ASN LYS LEU GLN TYR LYS TRP THR GLU ALA ASP VAL SEQRES 50 C 664 SER ALA ASN ILE HIS GLU VAL LEU MET HIS GLY VAL SER SEQRES 51 C 664 VAL GLU LYS THR GLU ARG PHE LEU ARG SER VAL MET PRO SEQRES 52 C 664 ARG SEQRES 1 D 7 U U U U U C C SEQRES 1 E 7 U U U U U C C SEQRES 1 F 7 U U U U U C C HET MN A1665 1 HET MN B1665 1 HET MN C1665 1 HETNAM MN MANGANESE (II) ION FORMUL 7 MN 3(MN 2+) FORMUL 10 HOH *604(H2 O) HELIX 1 1 ASP A 11 MET A 16 1 6 HELIX 2 2 ASN A 21 ARG A 30 1 10 HELIX 3 3 ASP A 47 PHE A 65 1 19 HELIX 4 4 PHE A 84 MET A 87 5 4 HELIX 5 5 ASN A 105 ALA A 112 1 8 HELIX 6 6 SER A 120 SER A 136 1 17 HELIX 7 7 ASP A 159 GLN A 183 1 25 HELIX 8 8 LYS A 185 GLN A 194 1 10 HELIX 9 9 ASP A 229 THR A 235 1 7 HELIX 10 10 SER A 250 GLY A 257 1 8 HELIX 11 11 PRO A 276 LYS A 297 1 22 HELIX 12 12 TYR A 298 HIS A 303 1 6 HELIX 13 13 THR A 306 GLU A 316 1 11 HELIX 14 14 ASP A 327 TRP A 332 1 6 HELIX 15 15 PRO A 333 GLY A 348 1 16 HELIX 16 16 ALA A 350 LEU A 361 1 12 HELIX 17 17 ALA A 397 ALA A 419 1 23 HELIX 18 18 PRO A 420 ILE A 426 5 7 HELIX 19 19 ASP A 428 GLN A 441 1 14 HELIX 20 20 ARG A 463 GLY A 478 1 16 HELIX 21 21 GLU A 508 ALA A 512 5 5 HELIX 22 22 ASN A 517 SER A 527 1 11 HELIX 23 23 ASP A 538 ARG A 542 5 5 HELIX 24 24 PHE A 546 GLY A 548 5 3 HELIX 25 25 LEU A 549 GLY A 559 1 11 HELIX 26 26 ILE A 563 GLY A 580 1 18 HELIX 27 27 SER A 582 SER A 599 1 18 HELIX 28 28 THR A 615 ASP A 624 1 10 HELIX 29 29 PRO A 625 GLN A 629 5 5 HELIX 30 30 THR A 633 VAL A 637 5 5 HELIX 31 31 SER A 638 LEU A 645 1 8 HELIX 32 32 SER A 650 MET A 662 1 13 HELIX 33 33 ASP B 11 MET B 16 1 6 HELIX 34 34 ASN B 21 ARG B 30 1 10 HELIX 35 35 ASP B 47 PHE B 65 1 19 HELIX 36 36 PHE B 84 MET B 87 5 4 HELIX 37 37 ASN B 105 ALA B 112 1 8 HELIX 38 38 SER B 120 SER B 136 1 17 HELIX 39 39 ASP B 159 GLN B 183 1 25 HELIX 40 40 LYS B 185 GLN B 194 1 10 HELIX 41 41 ASP B 229 THR B 235 1 7 HELIX 42 42 ALA B 249 GLY B 257 1 9 HELIX 43 43 PRO B 276 TYR B 295 1 20 HELIX 44 44 TYR B 298 HIS B 303 1 6 HELIX 45 45 THR B 306 GLU B 316 1 11 HELIX 46 46 ASP B 327 TRP B 332 1 6 HELIX 47 47 PRO B 333 MET B 347 1 15 HELIX 48 48 ALA B 350 LEU B 361 1 12 HELIX 49 49 ALA B 397 THR B 418 1 22 HELIX 50 50 ALA B 419 ILE B 426 5 8 HELIX 51 51 ASP B 428 GLN B 441 1 14 HELIX 52 52 ARG B 463 GLY B 478 1 16 HELIX 53 53 GLU B 508 ALA B 512 5 5 HELIX 54 54 ASN B 517 SER B 527 1 11 HELIX 55 55 ASP B 538 ARG B 542 5 5 HELIX 56 56 PHE B 546 GLY B 548 5 3 HELIX 57 57 LEU B 549 GLY B 559 1 11 HELIX 58 58 ILE B 563 GLY B 580 1 18 HELIX 59 59 SER B 582 ARG B 600 1 19 HELIX 60 60 THR B 615 ASP B 624 1 10 HELIX 61 61 PRO B 625 GLN B 629 5 5 HELIX 62 62 THR B 633 VAL B 637 5 5 HELIX 63 63 SER B 638 LEU B 645 1 8 HELIX 64 64 SER B 650 MET B 662 1 13 HELIX 65 65 ASP C 11 MET C 16 1 6 HELIX 66 66 ASN C 21 ARG C 30 1 10 HELIX 67 67 ASP C 47 PHE C 65 1 19 HELIX 68 68 PHE C 84 MET C 87 5 4 HELIX 69 69 ASN C 105 ALA C 112 1 8 HELIX 70 70 SER C 120 SER C 136 1 17 HELIX 71 71 ASP C 159 GLN C 183 1 25 HELIX 72 72 LYS C 185 GLN C 194 1 10 HELIX 73 73 ASP C 229 THR C 235 1 7 HELIX 74 74 SER C 250 GLY C 257 1 8 HELIX 75 75 PRO C 276 LYS C 297 1 22 HELIX 76 76 TYR C 298 HIS C 303 1 6 HELIX 77 77 THR C 306 GLU C 316 1 11 HELIX 78 78 ASP C 327 TRP C 332 1 6 HELIX 79 79 PRO C 333 GLY C 348 1 16 HELIX 80 80 ALA C 350 LEU C 361 1 12 HELIX 81 81 ALA C 397 THR C 418 1 22 HELIX 82 82 ALA C 419 ILE C 426 5 8 HELIX 83 83 ASP C 428 GLN C 441 1 14 HELIX 84 84 ALA C 464 GLY C 478 1 15 HELIX 85 85 GLU C 508 ALA C 512 5 5 HELIX 86 86 ASN C 517 SER C 527 1 11 HELIX 87 87 ASP C 538 ARG C 542 5 5 HELIX 88 88 PHE C 546 GLY C 548 5 3 HELIX 89 89 LEU C 549 GLY C 559 1 11 HELIX 90 90 ILE C 563 GLY C 580 1 18 HELIX 91 91 SER C 582 SER C 599 1 18 HELIX 92 92 THR C 615 ASP C 624 1 10 HELIX 93 93 PRO C 625 GLN C 629 5 5 HELIX 94 94 THR C 633 VAL C 637 5 5 HELIX 95 95 SER C 638 LEU C 645 1 8 HELIX 96 96 SER C 650 MET C 662 1 13 SHEET 1 AA 6 ALA A 6 PRO A 8 0 SHEET 2 AA 6 THR A 377 LEU A 379 -1 O LEU A 378 N PHE A 7 SHEET 3 AA 6 VAL A 365 VAL A 367 -1 O VAL A 365 N LEU A 379 SHEET 4 AA 6 TYR A 199 GLN A 206 1 O TYR A 199 N TYR A 366 SHEET 5 AA 6 PHE A 265 GLY A 274 -1 O ARG A 268 N GLN A 206 SHEET 6 AA 6 HIS A 89 PRO A 94 1 N MET A 90 O PHE A 265 SHEET 1 AB 2 GLU A 38 TYR A 40 0 SHEET 2 AB 2 LEU A 43 LEU A 44 -1 O LEU A 43 N TYR A 40 SHEET 1 AC 2 LYS A 144 ARG A 146 0 SHEET 2 AC 2 MET A 646 GLY A 648 -1 O HIS A 647 N ILE A 145 SHEET 1 AD 2 ILE A 211 ASP A 214 0 SHEET 2 AD 2 LYS A 219 SER A 222 -1 O LYS A 219 N ASP A 214 SHEET 1 AE 2 MET A 226 ALA A 228 0 SHEET 2 AE 2 LEU A 242 ALA A 244 -1 O PHE A 243 N VAL A 227 SHEET 1 AF 4 ILE A 446 LYS A 451 0 SHEET 2 AF 4 ASP A 454 TRP A 459 -1 O ASP A 454 N LYS A 451 SHEET 3 AF 4 LEU A 319 VAL A 325 -1 O LEU A 319 N TRP A 459 SHEET 4 AF 4 ILE A 488 TYR A 490 -1 O SER A 489 N ASP A 324 SHEET 1 AG 3 ALA A 495 PHE A 496 0 SHEET 2 AG 3 ASP A 499 LEU A 502 -1 O ASP A 499 N PHE A 496 SHEET 3 AG 3 ILE A 513 GLY A 516 -1 O ILE A 513 N LEU A 502 SHEET 1 BA 6 ALA B 6 PRO B 8 0 SHEET 2 BA 6 THR B 377 LEU B 379 -1 O LEU B 378 N PHE B 7 SHEET 3 BA 6 VAL B 365 VAL B 367 -1 O VAL B 365 N LEU B 379 SHEET 4 BA 6 TYR B 199 GLN B 206 1 O TYR B 199 N TYR B 366 SHEET 5 BA 6 PHE B 265 GLY B 274 -1 O ARG B 268 N GLN B 206 SHEET 6 BA 6 HIS B 89 PRO B 94 1 N MET B 90 O PHE B 265 SHEET 1 BB 2 GLU B 38 TYR B 40 0 SHEET 2 BB 2 LEU B 43 LEU B 44 -1 O LEU B 43 N TYR B 40 SHEET 1 BC 2 LYS B 144 ARG B 146 0 SHEET 2 BC 2 MET B 646 GLY B 648 -1 O HIS B 647 N ILE B 145 SHEET 1 BD 2 ILE B 211 ASP B 214 0 SHEET 2 BD 2 LYS B 219 SER B 222 -1 O LYS B 219 N ASP B 214 SHEET 1 BE 2 MET B 226 ALA B 228 0 SHEET 2 BE 2 LEU B 242 ALA B 244 -1 O PHE B 243 N VAL B 227 SHEET 1 BF 4 ILE B 446 LYS B 451 0 SHEET 2 BF 4 ASP B 454 TRP B 459 -1 O ASP B 454 N LYS B 451 SHEET 3 BF 4 LEU B 319 VAL B 325 -1 O LEU B 319 N TRP B 459 SHEET 4 BF 4 ILE B 488 TYR B 490 -1 O SER B 489 N ASP B 324 SHEET 1 BG 3 ALA B 495 PHE B 496 0 SHEET 2 BG 3 ASP B 499 LEU B 502 -1 O ASP B 499 N PHE B 496 SHEET 3 BG 3 ILE B 513 GLY B 516 -1 O ILE B 513 N LEU B 502 SHEET 1 CA 6 ALA C 6 PRO C 8 0 SHEET 2 CA 6 THR C 377 LEU C 379 -1 O LEU C 378 N PHE C 7 SHEET 3 CA 6 VAL C 365 VAL C 367 -1 O VAL C 365 N LEU C 379 SHEET 4 CA 6 TYR C 199 GLN C 206 1 O TYR C 199 N TYR C 366 SHEET 5 CA 6 PHE C 265 GLY C 274 -1 O ARG C 268 N GLN C 206 SHEET 6 CA 6 HIS C 89 PRO C 94 1 N MET C 90 O PHE C 265 SHEET 1 CB 2 GLU C 38 TYR C 40 0 SHEET 2 CB 2 LEU C 43 LEU C 44 -1 O LEU C 43 N TYR C 40 SHEET 1 CC 2 LYS C 144 ARG C 146 0 SHEET 2 CC 2 MET C 646 GLY C 648 -1 O HIS C 647 N ILE C 145 SHEET 1 CD 2 ILE C 211 LEU C 213 0 SHEET 2 CD 2 PHE C 220 SER C 222 -1 O VAL C 221 N THR C 212 SHEET 1 CE 2 MET C 226 ALA C 228 0 SHEET 2 CE 2 LEU C 242 ALA C 244 -1 O PHE C 243 N VAL C 227 SHEET 1 CF 4 ILE C 446 LYS C 451 0 SHEET 2 CF 4 ASP C 454 TRP C 459 -1 O ASP C 454 N LYS C 451 SHEET 3 CF 4 LEU C 319 VAL C 325 -1 O LEU C 319 N TRP C 459 SHEET 4 CF 4 ILE C 488 TYR C 490 -1 O SER C 489 N ASP C 324 SHEET 1 CG 3 ALA C 495 PHE C 496 0 SHEET 2 CG 3 ASP C 499 LEU C 502 -1 O ASP C 499 N PHE C 496 SHEET 3 CG 3 ILE C 513 GLY C 516 -1 O ILE C 513 N LEU C 502 LINK OD1 ASP A 454 MN MN A1665 1555 1555 2.10 LINK OE1 GLU A 491 MN MN A1665 1555 1555 1.98 LINK O ALA A 495 MN MN A1665 1555 1555 2.20 LINK MN MN A1665 O HOH A2179 1555 1555 2.18 LINK OD1 ASP B 454 MN MN B1665 1555 1555 2.14 LINK OE1 GLU B 491 MN MN B1665 1555 1555 2.07 LINK O ALA B 495 MN MN B1665 1555 1555 2.19 LINK MN MN B1665 O HOH B2269 1555 1555 2.36 LINK MN MN B1665 O HOH B2270 1555 1555 2.33 LINK MN MN B1665 O HOH B2271 1555 1555 2.18 LINK OD1 ASP C 454 MN MN C1665 1555 1555 2.17 LINK OE1 GLU C 491 MN MN C1665 1555 1555 1.98 LINK O ALA C 495 MN MN C1665 1555 1555 2.19 LINK MN MN C1665 O HOH C2150 1555 1555 2.32 LINK MN MN C1665 O HOH C2151 1555 1555 2.26 CISPEP 1 ILE A 96 PRO A 97 0 -0.69 CISPEP 2 ILE A 153 PRO A 154 0 0.14 CISPEP 3 ILE B 96 PRO B 97 0 -0.60 CISPEP 4 ILE B 153 PRO B 154 0 0.20 CISPEP 5 ILE C 96 PRO C 97 0 -0.47 CISPEP 6 ILE C 153 PRO C 154 0 0.19 SITE 1 AC1 4 ASP A 454 GLU A 491 ALA A 495 HOH A2179 SITE 1 AC2 6 ASP B 454 GLU B 491 ALA B 495 HOH B2269 SITE 2 AC2 6 HOH B2270 HOH B2271 SITE 1 AC3 5 ASP C 454 GLU C 491 ALA C 495 HOH C2150 SITE 2 AC3 5 HOH C2151 CRYST1 105.062 93.510 140.711 90.00 101.19 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009518 0.000000 0.001883 0.00000 SCALE2 0.000000 0.010694 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007244 0.00000 MTRIX1 1 0.126050 -0.730080 -0.671640 76.28954 1 MTRIX2 1 -0.789330 -0.483910 0.377870 16.94423 1 MTRIX3 1 -0.600890 0.482520 -0.637270 79.51358 1 MTRIX1 2 0.126050 -0.730080 -0.671640 76.28954 1 MTRIX2 2 -0.789330 -0.483910 0.377870 16.94423 1 MTRIX3 2 -0.600890 0.482520 -0.637270 79.51358 1 MTRIX1 3 0.126050 -0.730080 -0.671640 76.28954 1 MTRIX2 3 -0.789330 -0.483910 0.377870 16.94423 1 MTRIX3 3 -0.600890 0.482520 -0.637270 79.51358 1 MTRIX1 4 -0.161410 -0.756680 0.633550 -59.38855 1 MTRIX2 4 0.774810 -0.494780 -0.393530 6.76792 1 MTRIX3 4 0.611240 0.427360 0.666140 -27.90308 1 MTRIX1 5 -0.161410 -0.756680 0.633550 -59.38855 1 MTRIX2 5 0.774810 -0.494780 -0.393530 6.76792 1 MTRIX3 5 0.611240 0.427360 0.666140 -27.90308 1 MTRIX1 6 -0.161410 -0.756680 0.633550 -59.38855 1 MTRIX2 6 0.774810 -0.494780 -0.393530 6.76792 1 MTRIX3 6 0.611240 0.427360 0.666140 -27.90308 1 MTRIX1 7 -0.161410 -0.756680 0.633550 -59.38855 1 MTRIX2 7 0.774810 -0.494780 -0.393530 6.76792 1 MTRIX3 7 0.611240 0.427360 0.666140 -27.90308 1