HEADER GLYCOPROTEIN 13-MAR-04 1UZK TITLE INTEGRIN BINDING CBEGF22-TB4-CBEGF33 FRAGMENT OF HUMAN FIBRILLIN-1, CA TITLE 2 BOUND TO CBEGF23 DOMAIN ONLY COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBRILLIN-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BEGF22-TB4-CBEGF23, RESIDUES 1486-1647; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 TISSUE: EXTRA-CELLULAR MATRIX; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: NM554 KEYWDS GLYCOPROTEIN, EXTRA-CELLULAR MATRIX, CALCIUM, TB DOMAIN, FIBRILLIN-1, KEYWDS 2 DISEASE MUTATION, EXTRACELLULAR MATRIX, POLYMORPHISM, CBEGF DOMAIN, KEYWDS 3 EGF-LIKE DOMAIN EXPDTA X-RAY DIFFRACTION AUTHOR S.S.J.LEE,V.KNOTT,K.HARLOS,P.A.HANDFORD,D.I.STUART REVDAT 4 08-MAY-19 1UZK 1 REMARK LINK REVDAT 3 24-FEB-09 1UZK 1 VERSN REVDAT 2 05-JUL-06 1UZK 1 JRNL REVDAT 1 24-MAY-06 1UZK 0 JRNL AUTH S.S.J.LEE,V.KNOTT,J.JOVANOVI,K.HARLOS,J.M.GRIMES,L.CHOULIER, JRNL AUTH 2 H.J.MARDON,D.I.STUART,P.A.HANDFORD JRNL TITL STRUCTURE OF THE INTEGRIN BINDING FRAGMENT FROM FIBRILLIN-1 JRNL TITL 2 GIVES NEW INSIGHTS INTO MICROFIBRIL ORGANIZATION JRNL REF STRUCTURE V. 12 717 2004 JRNL REFN ISSN 0969-2126 JRNL PMID 15062093 JRNL DOI 10.1016/J.STR.2004.02.023 REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELX REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.202 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 1612 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 32331 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.177 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 1254 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1123 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 151 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : NULL REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : NULL REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : NULL REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 11831 REMARK 3 NUMBER OF RESTRAINTS : 14105 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 ANGLE DISTANCES (A) : 0.031 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : NULL REMARK 3 ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : NULL REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : NULL REMARK 3 SIMILAR ADP COMPONENTS (A**2) : NULL REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: MOEWS & KRETSINGER REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH AND HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1UZK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-MAR-04. REMARK 100 THE DEPOSITION ID IS D_1290014799. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-01 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9787 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : MIRRORS/MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25753 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.350 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.42400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PBD FIBRILLIN SM BOUND FORM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SITTING DROP VAPOUR DIFFUSION 3 REMARK 280 MICROLITRE OF 25MG/ML PROTEIN, 10MM TRIS PH7.5 + 0.5 MICROLITRES REMARK 280 OF 40% V/V POLYPROPYLENE GLYCOL P400 + 2.5 MICROLITRES RESERVOIR REMARK 280 SOLUTION (0.2M LISULFATE, 0.1M TRIS PH 8.5, 30% PEG 4000), PH REMARK 280 8.50, VAPOR DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 21.25000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.40000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 51.30000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 21.25000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.40000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 51.30000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 21.25000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 35.40000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 51.30000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 21.25000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 35.40000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 51.30000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2001 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2002 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 FIBRILLIN-1-CONTAINING MICROFIBRILS PROVIDE LONG-TERM FORCE REMARK 400 BEARING STRUCTURAL SUPPORT REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 1539 REMARK 465 PRO A 1540 REMARK 465 ARG A 1541 REMARK 465 GLY A 1542 REMARK 465 ASP A 1543 REMARK 465 ASN A 1544 REMARK 465 GLY A 1545 REMARK 465 ASP A 1546 REMARK 465 THR A 1547 REMARK 465 ALA A 1548 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 1516 O HOH A 2044 1.32 REMARK 500 CB TYR A 1509 O HOH A 2036 1.41 REMARK 500 O ASP A 1537 O ILE A 1538 1.60 REMARK 500 CA TYR A 1509 O HOH A 2036 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A1523 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 CYS A1549 CA - CB - SG ANGL. DEV. = 8.0 DEGREES REMARK 500 ARG A1644 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A1644 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ASP A1647 CA - CB - CG ANGL. DEV. = -20.5 DEGREES REMARK 500 ASP A1647 OD1 - CG - OD2 ANGL. DEV. = 13.2 DEGREES REMARK 500 ASP A1647 CB - CG - OD2 ANGL. DEV. = -9.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A1497 79.54 66.41 REMARK 500 SER A1508 -142.76 -159.19 REMARK 500 ASP A1516 -10.83 81.57 REMARK 500 ASN A1551 64.01 62.11 REMARK 500 SER A1565 -134.43 -105.17 REMARK 500 CYS A1617 57.62 -149.81 REMARK 500 SER A1628 -151.39 -153.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 CYS A 1646 ASP A 1647 -148.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A2512 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A1606 OD2 REMARK 620 2 SER A1628 O 143.0 REMARK 620 3 ILE A1607 O 68.4 144.3 REMARK 620 4 GLU A1609 OE2 136.8 72.9 71.6 REMARK 620 5 HOH A2114 O 115.7 90.0 84.8 75.3 REMARK 620 6 ASP A1606 OD1 48.2 129.6 81.9 139.2 71.7 REMARK 620 7 THR A1625 O 73.5 71.7 141.8 143.1 114.2 74.2 REMARK 620 8 ASN A1624 OD1 80.8 82.8 89.2 83.1 158.4 128.0 82.8 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A2512 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1APJ RELATED DB: PDB REMARK 900 NMR STUDY OF THE TRANSFORMING GROWTH FACTOR BETA BINDINGPROTEIN- REMARK 900 LIKE DOMAIN (TB MODULE/ 8-CYS DOMAIN), NMR,21 STRUCTURES REMARK 900 RELATED ID: 1EMN RELATED DB: PDB REMARK 900 NMR STUDY OF A PAIR OF FIBRILLIN CA==2 +== BINDING EPIDERMAL GROWTH REMARK 900 FACTOR-LIKE DOMAINS, MINIMIZED AVERAGE STRUCTURE REMARK 900 RELATED ID: 1EMO RELATED DB: PDB REMARK 900 NMR STUDY OF A PAIR OF FIBRILLIN CA==2 +== BINDING EPIDERMAL GROWTH REMARK 900 FACTOR-LIKE DOMAINS, 22 STRUCTURES REMARK 900 RELATED ID: 1LMJ RELATED DB: PDB REMARK 900 NMR STUDY OF THE FIBRILLIN-1 CBEGF12-13 PAIR OF CA2+BINDING REMARK 900 EPIDERMAL GROWTH FACTOR -LIKE DOMAINS REMARK 900 RELATED ID: 1UZJ RELATED DB: PDB REMARK 900 INTEGRIN BINDING CBEGF22-TB4-CBEGF33 FRAGMENT OF HUMAN FIBRILLIN-1, REMARK 900 HOLO FORM. REMARK 900 RELATED ID: 1UZP RELATED DB: PDB REMARK 900 INTEGRIN BINDING CBEGF22-TB4-CBEGF33 FRAGMENT OF HUMAN FIBRILLIN-1, REMARK 900 SM BOUND FORM CBEGF23 DOMAIN ONLY. REMARK 900 RELATED ID: 1UZQ RELATED DB: PDB REMARK 900 INTEGRIN BINDING CBEGF22-TB4-CBEGF33 FRAGMENT OF HUMAN FIBRILLIN-1, REMARK 900 APO FORM CBEGF23 DOMAIN ONLY. REMARK 999 REMARK 999 SEQUENCE REMARK 999 FRAGMENT DBREF 1UZK A 1486 1647 UNP P35555 FBN1_HUMAN 1486 1647 SEQRES 1 A 162 THR ASP VAL ASN GLU CYS LEU ASP PRO THR THR CYS ILE SEQRES 2 A 162 SER GLY ASN CYS VAL ASN THR PRO GLY SER TYR ILE CYS SEQRES 3 A 162 ASP CYS PRO PRO ASP PHE GLU LEU ASN PRO THR ARG VAL SEQRES 4 A 162 GLY CYS VAL ASP THR ARG SER GLY ASN CYS TYR LEU ASP SEQRES 5 A 162 ILE ARG PRO ARG GLY ASP ASN GLY ASP THR ALA CYS SER SEQRES 6 A 162 ASN GLU ILE GLY VAL GLY VAL SER LYS ALA SER CYS CYS SEQRES 7 A 162 CYS SER LEU GLY LYS ALA TRP GLY THR PRO CYS GLU MSE SEQRES 8 A 162 CYS PRO ALA VAL ASN THR SER GLU TYR LYS ILE LEU CYS SEQRES 9 A 162 PRO GLY GLY GLU GLY PHE ARG PRO ASN PRO ILE THR VAL SEQRES 10 A 162 ILE LEU GLU ASP ILE ASP GLU CYS GLN GLU LEU PRO GLY SEQRES 11 A 162 LEU CYS GLN GLY GLY LYS CYS ILE ASN THR PHE GLY SER SEQRES 12 A 162 PHE GLN CYS ARG CYS PRO THR GLY TYR TYR LEU ASN GLU SEQRES 13 A 162 ASP THR ARG VAL CYS ASP MODRES 1UZK MSE A 1576 MET SELENOMETHIONINE HET MSE A1576 8 HET CA A2512 1 HETNAM MSE SELENOMETHIONINE HETNAM CA CALCIUM ION FORMUL 1 MSE C5 H11 N O2 SE FORMUL 2 CA CA 2+ FORMUL 3 HOH *151(H2 O) HELIX 1 1 ASN A 1489 ASP A 1493 5 5 HELIX 2 2 SER A 1558 CYS A 1564 1 7 HELIX 3 3 THR A 1582 CYS A 1589 1 8 HELIX 4 4 ASP A 1608 LEU A 1613 1 6 HELIX 5 5 PRO A 1614 CYS A 1617 5 4 SHEET 1 AA 2 ASN A1501 THR A1505 0 SHEET 2 AA 2 SER A1508 ASP A1512 -1 O SER A1508 N THR A1505 SHEET 1 AB 2 GLU A1518 LEU A1519 0 SHEET 2 AB 2 CYS A1526 VAL A1527 -1 O VAL A1527 N GLU A1518 SHEET 1 AC 4 SER A1550 VAL A1557 0 SHEET 2 AC 4 GLY A1532 ASP A1537 -1 O GLY A1532 N VAL A1557 SHEET 3 AC 4 ALA A1569 TRP A1570 -1 O ALA A1569 N TYR A1535 SHEET 4 AC 4 GLU A1575 MSE A1576 -1 O GLU A1575 N TRP A1570 SHEET 1 AD 2 PHE A1595 PRO A1597 0 SHEET 2 AD 2 LEU A1604 ASP A1606 -1 O GLU A1605 N ARG A1596 SHEET 1 AE 2 LYS A1621 ASN A1624 0 SHEET 2 AE 2 PHE A1629 ARG A1632 -1 O GLN A1630 N ILE A1623 SSBOND 1 CYS A 1491 CYS A 1502 1555 1555 2.07 SSBOND 2 CYS A 1497 CYS A 1511 1555 1555 2.01 SSBOND 3 CYS A 1513 CYS A 1526 1555 1555 2.01 SSBOND 4 CYS A 1534 CYS A 1562 1555 1555 2.05 SSBOND 5 CYS A 1549 CYS A 1574 1555 1555 2.03 SSBOND 6 CYS A 1563 CYS A 1577 1555 1555 2.02 SSBOND 7 CYS A 1564 CYS A 1589 1555 1555 2.03 SSBOND 8 CYS A 1610 CYS A 1622 1555 1555 2.04 SSBOND 9 CYS A 1617 CYS A 1631 1555 1555 2.03 SSBOND 10 CYS A 1633 CYS A 1646 1555 1555 2.05 LINK C GLU A1575 N MSE A1576 1555 1555 1.34 LINK C MSE A1576 N CYS A1577 1555 1555 1.32 LINK CA CA A2512 OD2 ASP A1606 1555 1555 2.75 LINK CA CA A2512 O SER A1628 1555 1555 2.46 LINK CA CA A2512 O ILE A1607 1555 1555 2.36 LINK CA CA A2512 OE2 GLU A1609 1555 1555 2.47 LINK CA CA A2512 O HOH A2114 1555 1555 2.44 LINK CA CA A2512 OD1 ASP A1606 1555 1555 2.48 LINK CA CA A2512 O THR A1625 1555 1555 2.49 LINK CA CA A2512 OD1 ASN A1624 1555 1555 2.39 CISPEP 1 THR A 1572 PRO A 1573 0 -10.20 SITE 1 AC1 7 ASP A1606 ILE A1607 GLU A1609 ASN A1624 SITE 2 AC1 7 THR A1625 SER A1628 HOH A2114 CRYST1 42.500 70.800 102.600 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023529 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014124 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009746 0.00000