HEADER HYDROLASE 26-MAR-04 1V0D TITLE CRYSTAL STRUCTURE OF CASPASE-ACTIVATED DNASE (CAD) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA FRAGMENTATION FACTOR 40 KDA SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-329; COMPND 5 SYNONYM: DFF-40, CASPASE-ACTIVATED DEOXYRIBONUCLEASE, COMPND 6 CASPASE-ACTIVATED DNASECAD; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS HYDROLASE, NUCLEASE, CASPASE-ACTIVATED DNASE EXPDTA X-RAY DIFFRACTION AUTHOR E.-J.WOO,Y.-G.KIM,M.-S.KIM,W.-D.HAN,S.SHIN,B.-H.OH REVDAT 3 24-FEB-09 1V0D 1 VERSN REVDAT 2 07-JUN-04 1V0D 1 REMARK REVDAT 1 21-MAY-04 1V0D 0 JRNL AUTH E.-J.WOO,Y.-G.KIM,M.-S.KIM,W.-D.HAN,S.SHIN, JRNL AUTH 2 H.ROBINSON,S.-Y.PARK,B.-H.OH JRNL TITL STRUCTURAL MECHANISM FOR INACTIVATION AND JRNL TITL 2 ACTIVATION OF CAD/DFF40 IN THE APOPTOTIC PATHWAY JRNL REF MOL.CELL V. 14 531 2004 JRNL REFN ISSN 1097-2765 JRNL PMID 15149602 JRNL DOI 10.1016/S1097-2765(04)00258-8 REMARK 2 REMARK 2 RESOLUTION. 2.6 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.6 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.0 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 14995 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.0 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1936 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 16 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.0075 REMARK 3 BOND ANGLES (DEGREES) : 1.3894 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1V0D COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-MAR-04. REMARK 100 THE PDBE ID CODE IS EBI-14880. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.00 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9479 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14995 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 24.66067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 49.32133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 24.66067 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 49.32133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 165.28350 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 95.42647 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 CYS A 2 REMARK 465 ALA A 3 REMARK 465 VAL A 4 REMARK 465 LEU A 5 REMARK 465 ARG A 6 REMARK 465 GLN A 7 REMARK 465 PRO A 8 REMARK 465 LYS A 9 REMARK 465 CYS A 10 REMARK 465 VAL A 11 REMARK 465 LYS A 12 REMARK 465 LEU A 13 REMARK 465 ARG A 14 REMARK 465 ALA A 15 REMARK 465 LEU A 16 REMARK 465 HIS A 17 REMARK 465 SER A 18 REMARK 465 ALA A 19 REMARK 465 CYS A 20 REMARK 465 LYS A 21 REMARK 465 PHE A 22 REMARK 465 GLY A 23 REMARK 465 VAL A 24 REMARK 465 ALA A 25 REMARK 465 ALA A 26 REMARK 465 ARG A 27 REMARK 465 SER A 28 REMARK 465 CYS A 29 REMARK 465 GLN A 30 REMARK 465 GLU A 31 REMARK 465 LEU A 32 REMARK 465 LEU A 33 REMARK 465 ARG A 34 REMARK 465 LYS A 35 REMARK 465 GLY A 36 REMARK 465 CYS A 37 REMARK 465 VAL A 38 REMARK 465 ARG A 39 REMARK 465 PHE A 40 REMARK 465 GLN A 41 REMARK 465 LEU A 42 REMARK 465 PRO A 43 REMARK 465 MET A 44 REMARK 465 PRO A 45 REMARK 465 GLY A 46 REMARK 465 SER A 47 REMARK 465 ARG A 48 REMARK 465 LEU A 49 REMARK 465 CYS A 50 REMARK 465 LEU A 51 REMARK 465 TYR A 52 REMARK 465 GLU A 53 REMARK 465 ASP A 54 REMARK 465 GLY A 55 REMARK 465 THR A 56 REMARK 465 GLU A 57 REMARK 465 VAL A 58 REMARK 465 THR A 59 REMARK 465 ASP A 60 REMARK 465 ASP A 61 REMARK 465 CYS A 62 REMARK 465 PHE A 63 REMARK 465 PRO A 64 REMARK 465 GLY A 65 REMARK 465 LEU A 66 REMARK 465 PRO A 67 REMARK 465 ASN A 68 REMARK 465 ASP A 69 REMARK 465 ALA A 70 REMARK 465 GLU A 71 REMARK 465 LEU A 72 REMARK 465 LEU A 73 REMARK 465 LEU A 74 REMARK 465 LEU A 75 REMARK 465 THR A 76 REMARK 465 ALA A 77 REMARK 465 GLY A 78 REMARK 465 GLU A 79 REMARK 465 THR A 80 REMARK 465 TRP A 81 REMARK 465 HIS A 82 REMARK 465 GLY A 83 REMARK 465 TYR A 84 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 90 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 99 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A 104 CG CD OE1 NE2 REMARK 470 SER A 111 OG REMARK 470 ASP A 112 CG OD1 OD2 REMARK 470 ARG A 118 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 183 CG CD OE1 OE2 REMARK 470 GLU A 187 CG CD OE1 OE2 REMARK 470 GLN A 198 CG CD OE1 NE2 REMARK 470 GLU A 236 CG CD OE1 OE2 REMARK 470 LYS A 314 CG CD CE NZ REMARK 470 GLN A 326 CG CD OE1 NE2 REMARK 470 SER A 329 CA C O CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 98 -144.61 -67.28 REMARK 500 GLU A 113 143.56 -25.71 REMARK 500 SER A 130 65.61 -66.05 REMARK 500 ASP A 141 61.71 -169.91 REMARK 500 GLU A 149 172.53 -49.87 REMARK 500 ALA A 176 -17.36 -42.92 REMARK 500 TYR A 205 28.04 45.67 REMARK 500 ILE A 244 139.81 -172.13 REMARK 500 ASN A 249 142.17 179.54 REMARK 500 LYS A 314 38.68 -73.59 REMARK 500 ARG A 319 -37.24 -37.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 229 SG REMARK 620 2 CYS A 238 SG 110.7 REMARK 620 3 HIS A 242 ND1 115.0 91.6 REMARK 620 4 CYS A 307 SG 107.7 121.9 109.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 501 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 262 OD1 REMARK 620 2 HIS A 308 NE2 71.3 REMARK 620 3 HOH A2010 O 111.7 119.3 REMARK 620 4 HOH A2013 O 144.4 83.2 102.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PB A 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1C9F RELATED DB: PDB REMARK 900 NMR STRUCTURE OF THE CAD DOMAIN OF CASPASE REMARK 900 -ACTIVATED DNASE REMARK 900 RELATED ID: 1F2R RELATED DB: PDB REMARK 900 NMR STRUCTURE OF THE HETERODIMERIC COMPLEX REMARK 900 BETWEEN CAD DOMAINS OF CAD AND ICAD DBREF 1V0D A 1 329 UNP O54788 DFFB_MOUSE 1 329 SEQADV 1V0D GLN A 109 UNP O54788 LEU 109 CONFLICT SEQRES 1 A 329 MET CYS ALA VAL LEU ARG GLN PRO LYS CYS VAL LYS LEU SEQRES 2 A 329 ARG ALA LEU HIS SER ALA CYS LYS PHE GLY VAL ALA ALA SEQRES 3 A 329 ARG SER CYS GLN GLU LEU LEU ARG LYS GLY CYS VAL ARG SEQRES 4 A 329 PHE GLN LEU PRO MET PRO GLY SER ARG LEU CYS LEU TYR SEQRES 5 A 329 GLU ASP GLY THR GLU VAL THR ASP ASP CYS PHE PRO GLY SEQRES 6 A 329 LEU PRO ASN ASP ALA GLU LEU LEU LEU LEU THR ALA GLY SEQRES 7 A 329 GLU THR TRP HIS GLY TYR VAL SER ASP ILE THR ARG PHE SEQRES 8 A 329 LEU SER VAL PHE ASN GLU PRO HIS ALA GLY VAL ILE GLN SEQRES 9 A 329 ALA ALA ARG GLN GLN LEU SER ASP GLU GLN ALA PRO LEU SEQRES 10 A 329 ARG GLN LYS LEU LEU ALA ASP LEU LEU HIS HIS VAL SER SEQRES 11 A 329 GLN ASN ILE THR ALA GLU THR ARG GLU GLN ASP PRO SER SEQRES 12 A 329 TRP PHE GLU GLY LEU GLU SER ARG PHE ARG ASN LYS SER SEQRES 13 A 329 GLY TYR LEU ARG TYR SER CYS GLU SER ARG ILE ARG GLY SEQRES 14 A 329 TYR LEU ARG GLU VAL SER ALA TYR THR SER MET VAL ASP SEQRES 15 A 329 GLU ALA ALA GLN GLU GLU TYR LEU ARG VAL LEU GLY SER SEQRES 16 A 329 MET CYS GLN LYS LEU LYS SER VAL GLN TYR ASN GLY SER SEQRES 17 A 329 TYR PHE ASP ARG GLY ALA GLU ALA SER SER ARG LEU CYS SEQRES 18 A 329 THR PRO GLU GLY TRP PHE SER CYS GLN GLY PRO PHE ASP SEQRES 19 A 329 LEU GLU SER CYS LEU SER LYS HIS SER ILE ASN PRO TYR SEQRES 20 A 329 GLY ASN ARG GLU SER ARG ILE LEU PHE SER THR TRP ASN SEQRES 21 A 329 LEU ASP HIS ILE ILE GLU LYS LYS ARG THR VAL VAL PRO SEQRES 22 A 329 THR LEU ALA GLU ALA ILE GLN ASP GLY ARG GLU VAL ASN SEQRES 23 A 329 TRP GLU TYR PHE TYR SER LEU LEU PHE THR ALA GLU ASN SEQRES 24 A 329 LEU LYS LEU VAL HIS ILE ALA CYS HIS LYS LYS THR THR SEQRES 25 A 329 HIS LYS LEU GLU CYS ASP ARG SER ARG ILE TYR ARG PRO SEQRES 26 A 329 GLN THR GLY SER HET ZN A 401 1 HET MG A 501 1 HET PB A 601 1 HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION HETNAM PB LEAD (II) ION FORMUL 2 ZN ZN 2+ FORMUL 3 MG MG 2+ FORMUL 4 PB PB 2+ FORMUL 5 HOH *16(H2 O1) HELIX 1 1 ASP A 87 PHE A 95 1 9 HELIX 2 2 VAL A 102 ASP A 112 1 11 HELIX 3 3 ALA A 115 SER A 130 1 16 HELIX 4 4 ASN A 154 ALA A 176 1 23 HELIX 5 5 TYR A 177 VAL A 181 5 5 HELIX 6 6 ALA A 185 VAL A 203 1 19 HELIX 7 7 GLN A 204 ASP A 211 5 8 HELIX 8 8 ASN A 245 GLY A 248 5 4 HELIX 9 9 ASN A 249 PHE A 256 1 8 HELIX 10 10 THR A 270 GLY A 282 1 13 HELIX 11 11 ASN A 286 THR A 296 1 11 HELIX 12 12 HIS A 304 HIS A 308 5 5 SHEET 1 AA 2 PHE A 227 SER A 228 0 SHEET 2 AA 2 SER A 243 ILE A 244 -1 O ILE A 244 N PHE A 227 SHEET 1 AB 2 ASN A 260 HIS A 263 0 SHEET 2 AB 2 LEU A 300 VAL A 303 -1 O LYS A 301 N ASP A 262 LINK ZN ZN A 401 SG CYS A 229 1555 1555 2.37 LINK ZN ZN A 401 SG CYS A 238 1555 1555 2.33 LINK ZN ZN A 401 ND1 HIS A 242 1555 1555 2.23 LINK ZN ZN A 401 SG CYS A 307 1555 1555 2.22 LINK MG MG A 501 NE2 HIS A 308 1555 1555 2.97 LINK MG MG A 501 O HOH A2010 1555 1555 3.07 LINK MG MG A 501 O HOH A2013 1555 1555 2.80 LINK MG MG A 501 OD1 ASP A 262 1555 1555 2.30 LINK PB PB A 601 SG CYS A 197 1555 1555 2.95 SITE 1 AC1 4 CYS A 229 CYS A 238 HIS A 242 CYS A 307 SITE 1 AC2 4 ASP A 262 HIS A 308 HOH A2010 HOH A2013 SITE 1 AC3 1 CYS A 197 CRYST1 110.189 110.189 73.982 90.00 90.00 120.00 P 64 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009075 0.005240 0.000000 0.00000 SCALE2 0.000000 0.010479 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013517 0.00000