HEADER OXIDASE 02-APR-04 1V10 TITLE STRUCTURE OF RIGIDOPORUS LIGNOSUS LACCASE FROM HEMIHEDRALLY TWINNED TITLE 2 CRYSTALS COMPND MOL_ID: 1; COMPND 2 MOLECULE: LACCASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.10.3.2 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RIGIDOPORUS LIGNOSUS; SOURCE 3 ORGANISM_TAXID: 219653; SOURCE 4 ATCC: AJ609490 KEYWDS MULTICOPPER BLUE OXIDASE, OXIDASE EXPDTA X-RAY DIFFRACTION AUTHOR M.RIZZI,S.GARAVAGLIA,F.PALMIERI,A.CAMBRIA REVDAT 4 16-OCT-24 1V10 1 REMARK REVDAT 3 13-DEC-23 1V10 1 LINK REVDAT 2 24-FEB-09 1V10 1 VERSN REVDAT 1 16-SEP-04 1V10 0 JRNL AUTH S.GARAVAGLIA,M.T.CAMBRIA,M.MIGLIO,S.RAGUSA,V.IACOBAZZI, JRNL AUTH 2 F.PALMIERI,C.D'AMBROSIO,A.SCALONI,M.RIZZI JRNL TITL THE STRUCTURE OF RIGIDOPORUS LIGNOSUS LACCASE CONTAINING A JRNL TITL 2 FULL COMPLEMENT OF COPPER IONS, REVEALS AN ASYMMETRICAL JRNL TITL 3 ARRANGEMENT FOR THE T3 COPPER PAIR JRNL REF J.MOL.BIOL. V. 342 1519 2004 JRNL REFN ISSN 0022-2836 JRNL PMID 15364578 JRNL DOI 10.1016/J.JMB.2004.07.100 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.T.CAMBRIA,A.CAMBRIA,S.RAGUSA,E.RIZZARELLI REMARK 1 TITL PRODUCTION, PURIFICATION, AND PROPERTIES OF AN EXTRACELLULAR REMARK 1 TITL 2 LACCASE FROM RIGIDOPORUS LIGNOSUS REMARK 1 REF PROTEIN EXPR.PURIF. V. 18 141 2000 REMARK 1 REFN ISSN 1046-5928 REMARK 1 PMID 10686144 REMARK 1 DOI 10.1006/PREP.1999.1126 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : 913 REFLECTIONS RANDOMLY REMARK 3 SELECTED REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.226 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 91011 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE (F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3684 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 81 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : NULL REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : NULL REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : NULL REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : NULL REMARK 3 NUMBER OF RESTRAINTS : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 ANGLE DISTANCES (A) : 0.050 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : NULL REMARK 3 ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : NULL REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : NULL REMARK 3 SIMILAR ADP COMPONENTS (A**2) : NULL REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : NULL REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1V10 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-APR-04. REMARK 100 THE DEPOSITION ID IS D_1290014933. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 91011 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1GYC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.41133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 31.70567 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 47.55850 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 15.85283 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 79.26417 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 PRO A -20 REMARK 465 SER A -19 REMARK 465 PHE A -18 REMARK 465 ALA A -17 REMARK 465 SER A -16 REMARK 465 LEU A -15 REMARK 465 LYS A -14 REMARK 465 SER A -13 REMARK 465 LEU A -12 REMARK 465 VAL A -11 REMARK 465 VAL A -10 REMARK 465 LEU A -9 REMARK 465 SER A -8 REMARK 465 LEU A -7 REMARK 465 THR A -6 REMARK 465 SER A -5 REMARK 465 LEU A -4 REMARK 465 SER A -3 REMARK 465 LEU A -2 REMARK 465 ALA A -1 REMARK 465 VAL A 158 REMARK 465 LEU A 159 REMARK 465 PHE A 160 REMARK 465 PRO A 161 REMARK 465 ASN A 162 REMARK 465 PRO A 163 REMARK 465 ASN A 164 REMARK 465 PRO A 495 REMARK 465 ASP A 496 REMARK 465 SER A 497 REMARK 465 GLY A 498 REMARK 465 LEU A 499 REMARK 465 ALA A 500 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 180 O GLY A 277 2.05 REMARK 500 NH2 ARG A 180 OE2 GLU A 293 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASN A 494 C ASN A 494 O -0.191 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 43 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 58 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 59 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ASP A 96 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 TYR A 116 CA - CB - CG ANGL. DEV. = 15.2 DEGREES REMARK 500 ARG A 180 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 200 NE - CZ - NH1 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG A 204 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 204 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 PHE A 211 CB - CG - CD2 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG A 222 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 GLN A 298 O - C - N ANGL. DEV. = 10.5 DEGREES REMARK 500 ASN A 299 O - C - N ANGL. DEV. = 11.2 DEGREES REMARK 500 PRO A 315 C - N - CA ANGL. DEV. = 10.6 DEGREES REMARK 500 TYR A 416 CB - CG - CD1 ANGL. DEV. = -5.3 DEGREES REMARK 500 ARG A 424 NE - CZ - NH1 ANGL. DEV. = -4.2 DEGREES REMARK 500 ARG A 424 NE - CZ - NH2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASN A 494 CA - C - O ANGL. DEV. = 30.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 2 -162.47 -73.13 REMARK 500 LEU A 7 88.45 -150.87 REMARK 500 ALA A 12 148.89 -178.48 REMARK 500 GLU A 28 -160.20 53.93 REMARK 500 THR A 30 144.36 -171.34 REMARK 500 ASP A 41 -2.67 82.01 REMARK 500 MET A 57 -150.06 -114.56 REMARK 500 PHE A 81 19.03 51.26 REMARK 500 VAL A 82 -73.09 -109.10 REMARK 500 SER A 113 -140.99 43.50 REMARK 500 ASP A 140 101.10 -162.75 REMARK 500 SER A 156 -38.48 -35.12 REMARK 500 ALA A 169 164.48 172.80 REMARK 500 ASN A 184 110.51 -177.20 REMARK 500 PHE A 211 -84.86 -170.06 REMARK 500 ALA A 266 85.36 -151.06 REMARK 500 ASN A 299 163.14 -36.92 REMARK 500 THR A 302 88.24 -52.12 REMARK 500 LEU A 312 -88.72 -60.70 REMARK 500 ASN A 314 106.51 -33.65 REMARK 500 ALA A 317 100.01 -52.83 REMARK 500 PRO A 318 153.43 -49.74 REMARK 500 PRO A 321 35.38 -86.51 REMARK 500 ALA A 326 -177.62 -68.02 REMARK 500 ARG A 336 -159.34 -125.71 REMARK 500 ALA A 338 -95.86 -25.68 REMARK 500 THR A 339 -123.14 -55.61 REMARK 500 ALA A 341 -0.85 -167.91 REMARK 500 ALA A 348 127.01 -174.59 REMARK 500 PRO A 391 109.85 -39.33 REMARK 500 ASN A 395 20.92 83.40 REMARK 500 SER A 413 108.20 -166.38 REMARK 500 ASN A 420 53.12 -140.41 REMARK 500 ARG A 424 -156.72 -156.16 REMARK 500 ASN A 493 -91.18 -25.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2001 DISTANCE = 6.88 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A1502 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 64 NE2 REMARK 620 2 HIS A 399 NE2 172.9 REMARK 620 3 HOH A2018 O 86.2 100.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A1500 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 66 ND1 REMARK 620 2 HIS A 109 NE2 137.3 REMARK 620 3 HIS A 453 NE2 104.0 115.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A1501 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 111 NE2 REMARK 620 2 HIS A 401 NE2 120.8 REMARK 620 3 HIS A 451 NE2 106.5 115.4 REMARK 620 4 HOH A2071 O 97.5 88.1 128.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A1503 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 396 ND1 REMARK 620 2 CYS A 452 SG 117.0 REMARK 620 3 HIS A 457 ND1 110.2 132.8 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A1500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A1501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A1502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A1503 DBREF 1V10 A -21 500 PDB 1V10 1V10 -21 500 SEQRES 1 A 521 MET PRO SER PHE ALA SER LEU LYS SER LEU VAL VAL LEU SEQRES 2 A 521 SER LEU THR SER LEU SER LEU ALA ALA THR VAL ALA LEU SEQRES 3 A 521 ASP LEU HIS ILE LEU ASN ALA ASN LEU ASP PRO ASP GLY SEQRES 4 A 521 THR GLY ALA ARG SER ALA VAL THR ALA GLU GLY THR THR SEQRES 5 A 521 ILE ALA PRO LEU ILE THR GLY ASN ILE ASP ASP ARG PHE SEQRES 6 A 521 GLN ILE ASN VAL ILE ASP GLN LEU THR ASP ALA ASN MET SEQRES 7 A 521 ARG ARG ALA THR SER ILE HIS TRP HIS GLY PHE PHE GLN SEQRES 8 A 521 ALA GLY THR THR GLU MET ASP GLY PRO ALA PHE VAL ASN SEQRES 9 A 521 GLN CYS PRO ILE ILE PRO ASN GLU SER PHE VAL TYR ASP SEQRES 10 A 521 PHE VAL VAL PRO GLY GLN ALA GLY THR TYR TRP TYR HIS SEQRES 11 A 521 SER HIS LEU SER THR GLN TYR CYS ASP GLY LEU ARG GLY SEQRES 12 A 521 ALA PHE VAL VAL TYR ASP PRO ASN ASP PRO HIS LEU SER SEQRES 13 A 521 LEU TYR ASP VAL ASP ASP ALA SER THR VAL ILE THR ILE SEQRES 14 A 521 ALA ASP TRP TYR HIS SER LEU SER THR VAL LEU PHE PRO SEQRES 15 A 521 ASN PRO ASN LYS ALA PRO PRO ALA PRO ASP THR THR LEU SEQRES 16 A 521 ILE ASN GLY LEU GLY ARG ASN SER ALA ASN PRO SER ALA SEQRES 17 A 521 GLY GLN LEU ALA VAL VAL SER VAL GLN SER GLY LYS ARG SEQRES 18 A 521 TYR ARG PHE ARG ILE VAL SER THR SER CYS PHE PRO ASN SEQRES 19 A 521 TYR ALA PHE SER ILE ASP GLY HIS ARG MET THR VAL ILE SEQRES 20 A 521 GLU VAL ASP GLY VAL SER HIS GLN PRO LEU THR VAL ASP SEQRES 21 A 521 SER LEU THR ILE PHE ALA GLY GLN ARG TYR SER VAL VAL SEQRES 22 A 521 VAL GLU ALA ASN GLN ALA VAL GLY ASN TYR TRP ILE ARG SEQRES 23 A 521 ALA ASN PRO SER ASN GLY ARG ASN GLY PHE THR GLY GLY SEQRES 24 A 521 ILE ASN SER ALA ILE PHE ARG TYR GLN GLY ALA ALA VAL SEQRES 25 A 521 ALA GLU PRO THR THR SER GLN ASN SER GLY THR ALA LEU SEQRES 26 A 521 ASN GLU ALA ASN LEU ILE PRO LEU ILE ASN PRO GLY ALA SEQRES 27 A 521 PRO GLY ASN PRO VAL PRO GLY GLY ALA ASP ILE ASN LEU SEQRES 28 A 521 ASN LEU ARG ILE GLY ARG ASN ALA THR THR ALA ASP PHE SEQRES 29 A 521 THR ILE ASN GLY ALA PRO PHE ILE PRO PRO THR VAL PRO SEQRES 30 A 521 VAL LEU LEU GLN ILE LEU SER GLY VAL THR ASN PRO ASN SEQRES 31 A 521 ASP LEU LEU PRO GLY GLY ALA VAL ILE SER LEU PRO ALA SEQRES 32 A 521 ASN GLN VAL ILE GLU ILE SER ILE PRO GLY GLY GLY ASN SEQRES 33 A 521 HIS PRO PHE HIS LEU HIS GLY HIS ASN PHE ASP VAL VAL SEQRES 34 A 521 ARG THR PRO GLY SER SER VAL TYR ASN TYR VAL ASN PRO SEQRES 35 A 521 VAL ARG ARG ASP VAL VAL SER ILE GLY GLY GLY GLY ASP SEQRES 36 A 521 ASN VAL THR PHE ARG PHE VAL THR ASP ASN PRO GLY PRO SEQRES 37 A 521 TRP PHE LEU HIS CYS HIS ILE ASP TRP HIS LEU GLU ALA SEQRES 38 A 521 GLY LEU ALA VAL VAL PHE ALA GLU ASP ILE PRO ASN ILE SEQRES 39 A 521 PRO ILE ALA ASN ALA ILE SER PRO ALA TRP ASP ASP LEU SEQRES 40 A 521 CYS PRO LYS TYR ASN ALA ASN ASN PRO ASP SER GLY LEU SEQRES 41 A 521 ALA HET CU A1500 1 HET CU A1501 1 HET CU A1502 1 HET CU A1503 1 HETNAM CU COPPER (II) ION FORMUL 2 CU 4(CU 2+) FORMUL 6 HOH *81(H2 O) HELIX 1 1 THR A 73 ASP A 77 5 5 HELIX 2 2 THR A 114 GLY A 119 5 6 HELIX 3 3 HIS A 133 TYR A 137 5 5 HELIX 4 4 ASP A 141 SER A 143 5 3 HELIX 5 5 ASN A 184 GLY A 188 5 5 HELIX 6 6 PHE A 275 ILE A 279 5 5 HELIX 7 7 ASN A 305 LEU A 309 5 5 HELIX 8 8 PRO A 356 GLY A 364 1 9 HELIX 9 9 ASN A 367 LEU A 371 5 5 HELIX 10 10 ILE A 454 GLU A 459 1 6 HELIX 11 11 ASN A 472 ASN A 477 1 6 HELIX 12 12 SER A 480 ASP A 485 1 6 HELIX 13 13 ASP A 485 ASN A 491 1 7 SHEET 1 AA 4 ARG A 22 ALA A 27 0 SHEET 2 AA 4 ALA A 4 LEU A 14 -1 O LEU A 10 N THR A 26 SHEET 3 AA 4 ARG A 43 ASP A 50 1 O GLN A 45 N LEU A 5 SHEET 4 AA 4 GLU A 91 VAL A 98 -1 O GLU A 91 N ASP A 50 SHEET 1 AB 4 ILE A 36 ASN A 39 0 SHEET 2 AB 4 ARG A 121 TYR A 127 1 O ALA A 123 N ILE A 36 SHEET 3 AB 4 GLY A 104 SER A 110 -1 O GLY A 104 N VAL A 126 SHEET 4 AB 4 ILE A 63 HIS A 66 -1 O HIS A 64 N HIS A 109 SHEET 1 AC 6 THR A 172 ILE A 175 0 SHEET 2 AC 6 VAL A 145 TRP A 151 -1 O ALA A 149 N LEU A 174 SHEET 3 AC 6 ARG A 200 SER A 207 1 O ARG A 204 N ILE A 146 SHEET 4 AC 6 ARG A 248 GLU A 254 -1 O TYR A 249 N ILE A 205 SHEET 5 AC 6 MET A 223 VAL A 228 -1 O THR A 224 N VAL A 252 SHEET 6 AC 6 VAL A 231 VAL A 238 -1 O VAL A 231 N VAL A 228 SHEET 1 AD 5 VAL A 192 VAL A 195 0 SHEET 2 AD 5 SER A 281 TYR A 286 1 O ILE A 283 N VAL A 193 SHEET 3 AD 5 ASN A 261 PRO A 268 -1 O TYR A 262 N PHE A 284 SHEET 4 AD 5 TYR A 214 ILE A 218 -1 O ALA A 215 N ASN A 267 SHEET 5 AD 5 LEU A 241 ILE A 243 -1 O LEU A 241 N PHE A 216 SHEET 1 AE 5 ILE A 328 ASN A 331 0 SHEET 2 AE 5 VAL A 385 PRO A 391 1 O VAL A 385 N ILE A 328 SHEET 3 AE 5 ASN A 435 VAL A 441 -1 O VAL A 436 N ILE A 390 SHEET 4 AE 5 PHE A 405 ARG A 409 -1 N ASP A 406 O ARG A 439 SHEET 5 AE 5 ARG A 423 ARG A 424 -1 O ARG A 424 N PHE A 405 SHEET 1 AF 2 ILE A 334 GLY A 335 0 SHEET 2 AF 2 THR A 344 ILE A 345 -1 O THR A 344 N GLY A 335 SHEET 1 AG 5 VAL A 377 LEU A 380 0 SHEET 2 AG 5 ALA A 463 GLU A 468 1 O VAL A 465 N ILE A 378 SHEET 3 AG 5 GLY A 446 CYS A 452 -1 O GLY A 446 N GLU A 468 SHEET 4 AG 5 PRO A 397 LEU A 400 -1 O HIS A 399 N HIS A 451 SHEET 5 AG 5 VAL A 426 SER A 428 -1 O VAL A 427 N PHE A 398 SSBOND 1 CYS A 85 CYS A 487 1555 1555 2.66 SSBOND 2 CYS A 117 CYS A 210 1555 1555 2.03 LINK NE2 HIS A 64 CU CU A1502 1555 1555 2.08 LINK ND1 HIS A 66 CU CU A1500 1555 1555 1.84 LINK NE2 HIS A 109 CU CU A1500 1555 1555 2.14 LINK NE2 HIS A 111 CU CU A1501 1555 1555 2.21 LINK ND1 HIS A 396 CU CU A1503 1555 1555 2.14 LINK NE2 HIS A 399 CU CU A1502 1555 1555 1.77 LINK NE2 HIS A 401 CU CU A1501 1555 1555 2.02 LINK NE2 HIS A 451 CU CU A1501 1555 1555 1.82 LINK SG CYS A 452 CU CU A1503 1555 1555 2.17 LINK NE2 HIS A 453 CU CU A1500 1555 1555 2.26 LINK ND1 HIS A 457 CU CU A1503 1555 1555 2.15 LINK CU CU A1501 O HOH A2071 1555 1555 1.73 LINK CU CU A1502 O HOH A2018 1555 1555 2.40 CISPEP 1 LEU A 372 PRO A 373 0 5.75 SITE 1 AC1 4 HIS A 66 TRP A 107 HIS A 109 HIS A 453 SITE 1 AC2 4 HIS A 111 HIS A 401 HIS A 451 HOH A2071 SITE 1 AC3 6 HIS A 64 HIS A 66 HIS A 399 HIS A 401 SITE 2 AC3 6 HOH A2018 HOH A2071 SITE 1 AC4 5 HIS A 396 CYS A 452 ILE A 454 HIS A 457 SITE 2 AC4 5 LEU A 462 CRYST1 124.914 124.914 95.117 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008005 0.004622 0.000000 0.00000 SCALE2 0.000000 0.009244 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010513 0.00000