HEADER CELL ADHESION 25-NOV-03 1V5J TITLE SOLUTION STRUCTURE OF RSGI RUH-008, FN3 DOMAIN IN HUMAN CDNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: KIAA1355 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FN3 DOMAIN; COMPND 5 SYNONYM: RSGI RUH-008; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KAZUSA CDNA KIAA1355; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P021007-47; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS FN3 DOMAIN, HUMAN CDNA, STRUCTURAL GENOMICS, RIKEN STRUCTURAL KEYWDS 2 GENOMICS/PROTEOMICS INITIATIVE, RSGI, CELL ADHESION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR Y.DOI-KATAYAMA,F.HAYASHI,H.HIROTA,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 27-DEC-23 1V5J 1 REMARK REVDAT 3 02-MAR-22 1V5J 1 REMARK SEQADV REVDAT 2 24-FEB-09 1V5J 1 VERSN REVDAT 1 25-MAY-04 1V5J 0 JRNL AUTH Y.DOI-KATAYAMA,F.HAYASHI,H.HIROTA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RSGI RUH-008, A FN3 DOMAIN IN HUMAN JRNL TITL 2 CDNA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 1.0.7 REMARK 3 AUTHORS : VARIAN (VNMR), GUENTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1V5J COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-DEC-03. REMARK 100 THE DEPOSITION ID IS D_1000006232. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 120MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.3MM FN3 DOMAIN U-15, 13C; 20MM REMARK 210 SODIUM PHOSPHATE; 100MM NACL; REMARK 210 0.02% NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.822, CYANA 1.0.7 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG A 45 H GLU A 77 1.49 REMARK 500 H VAL A 17 O LEU A 24 1.53 REMARK 500 H THR A 19 O GLY A 22 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 87.20 43.83 REMARK 500 1 SER A 5 103.87 -160.86 REMARK 500 1 LYS A 35 -89.31 177.94 REMARK 500 1 ARG A 45 154.50 177.44 REMARK 500 1 TRP A 51 105.06 -57.99 REMARK 500 1 ASP A 55 103.33 -165.75 REMARK 500 1 ALA A 59 131.22 -37.22 REMARK 500 1 SER A 92 165.52 -41.22 REMARK 500 1 ASN A 93 154.61 -37.08 REMARK 500 1 THR A 99 63.90 -157.65 REMARK 500 1 SER A 103 72.12 44.67 REMARK 500 1 SER A 106 137.99 -175.34 REMARK 500 2 SER A 3 33.76 -92.88 REMARK 500 2 LYS A 35 -88.17 174.20 REMARK 500 2 ARG A 45 153.81 176.16 REMARK 500 2 VAL A 53 104.19 -46.01 REMARK 500 2 ALA A 59 131.32 -36.63 REMARK 500 2 LEU A 70 174.48 -47.95 REMARK 500 2 ASP A 73 19.58 54.74 REMARK 500 2 SER A 86 -58.47 90.94 REMARK 500 2 SER A 92 169.69 -43.28 REMARK 500 2 ASN A 93 160.17 -39.16 REMARK 500 2 THR A 99 73.83 -160.24 REMARK 500 2 SER A 107 126.48 -176.92 REMARK 500 3 SER A 2 -57.16 -138.19 REMARK 500 3 SER A 5 135.73 68.96 REMARK 500 3 SER A 6 -81.88 177.14 REMARK 500 3 LYS A 35 -106.09 -148.54 REMARK 500 3 ARG A 45 150.18 177.48 REMARK 500 3 SER A 48 -56.63 78.98 REMARK 500 3 GLN A 49 -144.69 25.36 REMARK 500 3 TRP A 51 105.16 -41.13 REMARK 500 3 ALA A 59 125.31 -37.96 REMARK 500 3 SER A 86 -60.36 87.76 REMARK 500 3 SER A 92 173.30 -45.51 REMARK 500 3 ASN A 93 168.14 -43.50 REMARK 500 3 SER A 103 -67.95 67.86 REMARK 500 4 SER A 5 74.60 -104.15 REMARK 500 4 LYS A 35 -90.25 172.30 REMARK 500 4 ARG A 45 153.20 176.49 REMARK 500 4 SER A 48 50.91 -118.66 REMARK 500 4 ALA A 59 128.35 -36.56 REMARK 500 4 SER A 92 172.57 -45.54 REMARK 500 4 ASN A 93 158.80 -39.68 REMARK 500 4 THR A 99 31.37 -157.74 REMARK 500 4 SER A 103 -63.32 80.40 REMARK 500 5 SER A 3 34.95 -91.27 REMARK 500 5 LEU A 14 98.30 -56.99 REMARK 500 5 LYS A 35 -86.36 177.22 REMARK 500 5 ARG A 45 147.38 178.15 REMARK 500 REMARK 500 THIS ENTRY HAS 228 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002001328.1 RELATED DB: TARGETDB DBREF 1V5J A 8 102 GB 7243091 BAA92593 634 728 SEQADV 1V5J GLY A 1 GB 7243091 CLONING ARTIFACT SEQADV 1V5J SER A 2 GB 7243091 CLONING ARTIFACT SEQADV 1V5J SER A 3 GB 7243091 CLONING ARTIFACT SEQADV 1V5J GLY A 4 GB 7243091 CLONING ARTIFACT SEQADV 1V5J SER A 5 GB 7243091 CLONING ARTIFACT SEQADV 1V5J SER A 6 GB 7243091 CLONING ARTIFACT SEQADV 1V5J GLY A 7 GB 7243091 CLONING ARTIFACT SEQADV 1V5J SER A 103 GB 7243091 CLONING ARTIFACT SEQADV 1V5J GLY A 104 GB 7243091 CLONING ARTIFACT SEQADV 1V5J PRO A 105 GB 7243091 CLONING ARTIFACT SEQADV 1V5J SER A 106 GB 7243091 CLONING ARTIFACT SEQADV 1V5J SER A 107 GB 7243091 CLONING ARTIFACT SEQADV 1V5J GLY A 108 GB 7243091 CLONING ARTIFACT SEQRES 1 A 108 GLY SER SER GLY SER SER GLY LEU SER PRO PRO ARG GLY SEQRES 2 A 108 LEU VAL ALA VAL ARG THR PRO ARG GLY VAL LEU LEU HIS SEQRES 3 A 108 TRP ASP PRO PRO GLU LEU VAL PRO LYS ARG LEU ASP GLY SEQRES 4 A 108 TYR VAL LEU GLU GLY ARG GLN GLY SER GLN GLY TRP GLU SEQRES 5 A 108 VAL LEU ASP PRO ALA VAL ALA GLY THR GLU THR GLU LEU SEQRES 6 A 108 LEU VAL PRO GLY LEU ILE LYS ASP VAL LEU TYR GLU PHE SEQRES 7 A 108 ARG LEU VAL ALA PHE ALA GLY SER PHE VAL SER ASP PRO SEQRES 8 A 108 SER ASN THR ALA ASN VAL SER THR SER GLY LEU SER GLY SEQRES 9 A 108 PRO SER SER GLY SHEET 1 A 6 ARG A 12 THR A 19 0 SHEET 2 A 6 GLY A 22 ASP A 28 -1 SHEET 3 A 6 TYR A 40 GLN A 46 -1 SHEET 4 A 6 GLU A 52 VAL A 58 -1 SHEET 5 A 6 GLU A 64 VAL A 67 -1 SHEET 6 A 6 PHE A 87 ASN A 96 -1 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1