HEADER    METAL BINDING PROTEIN                   29-DEC-03   1V87              
TITLE     SOLUTION STRUCTURE OF THE RING-H2 FINGER DOMAIN OF MOUSE DELTEX       
TITLE    2 PROTEIN 2                                                            
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DELTEX PROTEIN 2;                                          
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: RING-H2 FINGER DOMAIN;                                     
COMPND   5 SYNONYM: DELTEX-2, DELTEX2, MDTX2;                                   
COMPND   6 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: MUS MUSCULUS;                                   
SOURCE   3 ORGANISM_COMMON: HOUSE MOUSE;                                        
SOURCE   4 ORGANISM_TAXID: 10090;                                               
SOURCE   5 GENE: RIKEN CDNA 2610524D08;                                         
SOURCE   6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   7 EXPRESSION_SYSTEM_PLASMID: P030421-37;                               
SOURCE   8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS                           
KEYWDS    RING-H2 DOMAIN, ZINC-BINDING DOMAIN, NOTCH SIGNALING, STRUCTURAL      
KEYWDS   2 GENOMICS, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI,     
KEYWDS   3 METAL BINDING PROTEIN                                                
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    K.MIYAMOTO,Y.MUTO,N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,     
AUTHOR   2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)               
REVDAT   4   27-DEC-23 1V87    1       REMARK                                   
REVDAT   3   02-MAR-22 1V87    1       REMARK SEQADV LINK                       
REVDAT   2   24-FEB-09 1V87    1       VERSN                                    
REVDAT   1   29-JUN-04 1V87    0                                                
JRNL        AUTH   K.MIYAMOTO,Y.MUTO,N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,       
JRNL        AUTH 2 S.YOKOYAMA                                                   
JRNL        TITL   SOLUTION STRUCTURE OF THE RING-H2 FINGER DOMAIN OF MOUSE     
JRNL        TITL 2 DELTEX PROTEIN 2                                             
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : XWINNMR 2.6, CYANA 2.0.17                            
REMARK   3   AUTHORS     : BRUKER (XWINNMR), GUENTERT, P. (CYANA)               
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1V87 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JAN-04.                  
REMARK 100 THE DEPOSITION ID IS D_1000006328.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298                                
REMARK 210  PH                             : 7.0                                
REMARK 210  IONIC STRENGTH                 : 120MM                              
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 1.05MM RING-H2 DOMAIN U-13C,       
REMARK 210                                   15N; 20MM D-TRIS-HCL(PH7.0);       
REMARK 210                                   100MM NACL; 1MM D-DTT; 0.02%       
REMARK 210                                   NAN3; 0.1MM ZNCL; 90% H2O, 10%D2O  
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 3D_13C-SEPARATED_NOESY; 3D_15N     
REMARK 210                                   -SEPARATED_NOESY                   
REMARK 210  SPECTROMETER FIELD STRENGTH    : 800 MHZ                            
REMARK 210  SPECTROMETER MODEL             : AVANCE                             
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NMRPIPE 20020425, NMRVIEW 5.0.4,   
REMARK 210                                   KUJIRA 0.880, CYANA 2.0.17         
REMARK 210   METHOD USED                   : TORSION ANGLE DYNAMICS             
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LEAST          
REMARK 210                                   RESTRAINT VIOLATIONS, STRUCTURES   
REMARK 210                                   WITH THE LOWEST ENERGY, TARGET     
REMARK 210                                   FUNCTION                           
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 PRO A  24     -166.28    -69.80                                   
REMARK 500  1 GLU A  25       33.35    -98.39                                   
REMARK 500  1 SER A  42      -36.26    -36.40                                   
REMARK 500  1 LEU A  58      175.88    -58.32                                   
REMARK 500  1 LYS A  60      -73.63    -95.09                                   
REMARK 500  1 HIS A  66      101.01    -50.36                                   
REMARK 500  1 LEU A  67      -33.09    -36.18                                   
REMARK 500  1 ASN A  78       80.41    -69.55                                   
REMARK 500  1 PRO A  86        7.63    -69.72                                   
REMARK 500  1 SER A  87      -69.30   -106.85                                   
REMARK 500  1 GLU A  94      -76.01    -32.58                                   
REMARK 500  1 THR A  98      163.36    -41.39                                   
REMARK 500  2 GLU A   8      150.23    -42.76                                   
REMARK 500  2 GLU A  25       32.49    -92.25                                   
REMARK 500  2 ALA A  38      176.00    -57.09                                   
REMARK 500  2 SER A  42      -27.63    -38.72                                   
REMARK 500  2 LYS A  60      -71.35   -100.52                                   
REMARK 500  2 HIS A  66      102.44    -56.47                                   
REMARK 500  2 LEU A  67      -27.84    -37.26                                   
REMARK 500  2 PRO A  86        2.37    -69.78                                   
REMARK 500  2 GLU A  94      133.61   -175.21                                   
REMARK 500  2 THR A  98      142.03   -175.07                                   
REMARK 500  2 LYS A 103       41.73    -89.87                                   
REMARK 500  2 SER A 113      118.28   -172.62                                   
REMARK 500  3 GLU A  19      139.11    -38.13                                   
REMARK 500  3 LYS A  21      -39.35    -39.23                                   
REMARK 500  3 PRO A  24     -165.10    -69.77                                   
REMARK 500  3 ALA A  38      170.56    -58.39                                   
REMARK 500  3 ASP A  46       40.23    -99.04                                   
REMARK 500  3 LYS A  60      -59.82   -124.11                                   
REMARK 500  3 HIS A  66      103.63    -49.35                                   
REMARK 500  3 LEU A  67      -27.17    -38.55                                   
REMARK 500  3 LYS A  79       68.51    -69.58                                   
REMARK 500  3 PRO A  86        3.92    -69.72                                   
REMARK 500  3 LYS A  89       45.52     35.88                                   
REMARK 500  3 LYS A  95      -60.45   -124.40                                   
REMARK 500  3 LYS A 103      118.18   -168.55                                   
REMARK 500  3 SER A 109       42.06   -107.75                                   
REMARK 500  3 SER A 113      -59.08   -122.21                                   
REMARK 500  4 LYS A  21      -37.13    -37.30                                   
REMARK 500  4 ALA A  23      130.54    -37.14                                   
REMARK 500  4 PRO A  24     -179.07    -69.80                                   
REMARK 500  4 GLU A  25       33.80    -88.75                                   
REMARK 500  4 ALA A  38     -179.47    -62.70                                   
REMARK 500  4 ASP A  46       33.28    -95.32                                   
REMARK 500  4 LEU A  58      173.88    -51.11                                   
REMARK 500  4 LYS A  60      -62.45    -90.24                                   
REMARK 500  4 HIS A  66      104.44    -51.06                                   
REMARK 500  4 LEU A  67      -26.39    -39.86                                   
REMARK 500  4 PRO A  86        3.06    -69.70                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     257 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A 201  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A  28   SG                                                     
REMARK 620 2 CYS A  31   SG   93.5                                              
REMARK 620 3 HIS A  66   ND1  91.2 111.0                                        
REMARK 620 4 CYS A  69   SG  119.3 117.3 119.2                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A 401  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A  61   SG                                                     
REMARK 620 2 HIS A  63   ND1  96.0                                              
REMARK 620 3 CYS A  85   SG  115.1 118.9                                        
REMARK 620 4 CYS A  88   SG   87.0 119.3 113.8                                  
REMARK 620 N                    1     2     3                                   
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401                  
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: MMT007011434.1   RELATED DB: TARGETDB                    
DBREF  1V87 A    8   108  UNP    Q8R3P2   DTX2_MOUSE     389    489             
SEQADV 1V87 GLY A    1  UNP  Q8R3P2              CLONING ARTIFACT               
SEQADV 1V87 SER A    2  UNP  Q8R3P2              CLONING ARTIFACT               
SEQADV 1V87 SER A    3  UNP  Q8R3P2              CLONING ARTIFACT               
SEQADV 1V87 GLY A    4  UNP  Q8R3P2              CLONING ARTIFACT               
SEQADV 1V87 SER A    5  UNP  Q8R3P2              CLONING ARTIFACT               
SEQADV 1V87 SER A    6  UNP  Q8R3P2              CLONING ARTIFACT               
SEQADV 1V87 GLY A    7  UNP  Q8R3P2              CLONING ARTIFACT               
SEQADV 1V87 SER A  109  UNP  Q8R3P2              CLONING ARTIFACT               
SEQADV 1V87 GLY A  110  UNP  Q8R3P2              CLONING ARTIFACT               
SEQADV 1V87 PRO A  111  UNP  Q8R3P2              CLONING ARTIFACT               
SEQADV 1V87 SER A  112  UNP  Q8R3P2              CLONING ARTIFACT               
SEQADV 1V87 SER A  113  UNP  Q8R3P2              CLONING ARTIFACT               
SEQADV 1V87 GLY A  114  UNP  Q8R3P2              CLONING ARTIFACT               
SEQRES   1 A  114  GLY SER SER GLY SER SER GLY GLU PRO GLU GLN VAL ILE          
SEQRES   2 A  114  ARG LYS TYR THR GLU GLU LEU LYS VAL ALA PRO GLU GLU          
SEQRES   3 A  114  ASP CYS ILE ILE CYS MET GLU LYS LEU ALA VAL ALA SER          
SEQRES   4 A  114  GLY TYR SER ASP MET THR ASP SER LYS ALA LEU GLY PRO          
SEQRES   5 A  114  MET VAL VAL GLY ARG LEU THR LYS CYS SER HIS ALA PHE          
SEQRES   6 A  114  HIS LEU LEU CYS LEU LEU ALA MET TYR CYS ASN GLY ASN          
SEQRES   7 A  114  LYS ASP GLY SER LEU GLN CYS PRO SER CYS LYS THR ILE          
SEQRES   8 A  114  TYR GLY GLU LYS THR GLY THR GLN PRO TRP GLY LYS MET          
SEQRES   9 A  114  GLU VAL PHE ARG SER GLY PRO SER SER GLY                      
HET     ZN  A 201       1                                                       
HET     ZN  A 401       1                                                       
HETNAM      ZN ZINC ION                                                         
FORMUL   2   ZN    2(ZN 2+)                                                     
HELIX    1   1 PRO A    9  TYR A   16  1                                   8    
HELIX    2   2 LEU A   67  ASN A   76  1                                  10    
HELIX    3   3 TYR A   41  THR A   45  1                                   5    
SHEET    1   A 3 THR A  17  GLU A  19  0                                        
SHEET    2   A 3 GLY A  56  LEU A  58 -1  O  ARG A  57   N  GLU A  18           
SHEET    3   A 3 ALA A  64  PHE A  65 -1  O  PHE A  65   N  GLY A  56           
SHEET    1   B 2 ASP A  27  CYS A  28  0                                        
SHEET    2   B 2 GLU A  33  LYS A  34 -1  O  GLU A  33   N  CYS A  28           
LINK         SG  CYS A  28                ZN    ZN A 201     1555   1555  2.33  
LINK         SG  CYS A  31                ZN    ZN A 201     1555   1555  2.33  
LINK         SG  CYS A  61                ZN    ZN A 401     1555   1555  2.32  
LINK         ND1 HIS A  63                ZN    ZN A 401     1555   1555  2.32  
LINK         ND1 HIS A  66                ZN    ZN A 201     1555   1555  2.33  
LINK         SG  CYS A  69                ZN    ZN A 201     1555   1555  2.32  
LINK         SG  CYS A  85                ZN    ZN A 401     1555   1555  2.33  
LINK         SG  CYS A  88                ZN    ZN A 401     1555   1555  2.32  
SITE     1 AC1  4 CYS A  28  CYS A  31  HIS A  66  CYS A  69                    
SITE     1 AC2  4 CYS A  61  HIS A  63  CYS A  85  CYS A  88                    
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
MODEL        1