HEADER STRUCTURAL PROTEIN 09-JAN-04 1V8K TITLE THE CRYSTAL STRUCTURE OF THE MINIMAL FUNCTIONAL DOMAIN OF THE TITLE 2 MICROTUBULE DESTABILIZER KIF2C COMPLEXED WITH MG-AMPPNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: KINESIN-LIKE PROTEIN KIF2C; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-403; COMPND 5 SYNONYM: MITOTIC CENTROMERE-ASSOCIATED KINESIN, MCAK; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: KIF2C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET21B KEYWDS KINESIN-LIKE PROTEIN, MICROTUBULE DESTABILIZER, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.OGAWA,R.NITTA,Y.OKADA,N.HIROKAWA REVDAT 4 27-DEC-23 1V8K 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 1V8K 1 VERSN REVDAT 2 24-FEB-09 1V8K 1 VERSN REVDAT 1 02-MAR-04 1V8K 0 JRNL AUTH T.OGAWA,R.NITTA,Y.OKADA,N.HIROKAWA JRNL TITL A COMMON MECHANISM FOR MICROTUBULE DESTABILIZERS-M TYPE JRNL TITL 2 KINESINS STABILIZE CURLING OF THE PROTOFILAMENT USING THE JRNL TITL 3 CLASS-SPECIFIC NECK AND LOOPS. JRNL REF CELL(CAMBRIDGE,MASS.) V. 116 591 2004 JRNL REFN ISSN 0092-8674 JRNL PMID 14980225 JRNL DOI 10.1016/S0092-8674(04)00129-1 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 979129.570 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 20437 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2004 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.39 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2715 REMARK 3 BIN R VALUE (WORKING SET) : 0.2650 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 290 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.017 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2630 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 111 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.84000 REMARK 3 B22 (A**2) : -15.81000 REMARK 3 B33 (A**2) : 16.65000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM SIGMAA (A) : 0.26 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.33 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.700 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.270 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 3.170 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 4.570 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 5.240 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 6.800 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 58.42 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ANP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ANP.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : WATER_REP.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1V8K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-JAN-03. REMARK 100 THE DEPOSITION ID IS D_1000006341. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUN-03 REMARK 200 TEMPERATURE (KELVIN) : 95.0 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9800 REMARK 200 MONOCHROMATOR : DOUBLE FLAT SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20584 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.240 REMARK 200 RESOLUTION RANGE LOW (A) : 47.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: POTASSIUM SODIUM TARTRATE REMARK 280 TETRAHYDRATE, MES, PH 6.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 297.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y+1/2,-Z REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 30.53400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 95.73750 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 30.53400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 95.73750 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 30.53400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 95.73750 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 30.53400 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 95.73750 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 56000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -113.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -122.13600 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 191.47500 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 -122.13600 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 191.47500 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 VAL A 2 REMARK 465 ARG A 3 REMARK 465 ARG A 4 REMARK 465 LYS A 5 REMARK 465 SER A 6 REMARK 465 CYS A 7 REMARK 465 ILE A 8 REMARK 465 VAL A 9 REMARK 465 LYS A 10 REMARK 465 GLU A 11 REMARK 465 MET A 12 REMARK 465 GLU A 13 REMARK 465 LYS A 14 REMARK 465 MET A 15 REMARK 465 LYS A 16 REMARK 465 ASN A 17 REMARK 465 LYS A 18 REMARK 465 ARG A 19 REMARK 465 GLU A 20 REMARK 465 GLU A 21 REMARK 465 LYS A 22 REMARK 465 ARG A 23 REMARK 465 ALA A 24 REMARK 465 GLN A 25 REMARK 465 ASN A 26 REMARK 465 SER A 27 REMARK 465 GLU A 28 REMARK 465 LEU A 29 REMARK 465 ARG A 30 REMARK 465 ILE A 31 REMARK 465 LYS A 32 REMARK 465 ARG A 33 REMARK 465 ALA A 34 REMARK 465 GLN A 35 REMARK 465 GLU A 36 REMARK 465 TYR A 37 REMARK 465 ASP A 38 REMARK 465 SER A 39 REMARK 465 SER A 40 REMARK 465 PHE A 41 REMARK 465 SER A 177 REMARK 465 GLY A 178 REMARK 465 LYS A 179 REMARK 465 SER A 180 REMARK 465 SER A 272 REMARK 465 GLY A 273 REMARK 465 GLN A 274 REMARK 465 THR A 275 REMARK 465 PHE A 276 REMARK 465 ALA A 277 REMARK 465 ASN A 278 REMARK 465 SER A 279 REMARK 465 ARG A 312 REMARK 465 GLY A 313 REMARK 465 ALA A 314 REMARK 465 ASP A 315 REMARK 465 THR A 316 REMARK 465 SER A 317 REMARK 465 SER A 318 REMARK 465 ALA A 319 REMARK 465 ASP A 320 REMARK 465 ARG A 321 REMARK 465 GLN A 322 REMARK 465 THR A 323 REMARK 465 ASN A 347 REMARK 465 LYS A 348 REMARK 465 ALA A 349 REMARK 465 HIS A 350 REMARK 465 THR A 351 REMARK 465 PRO A 352 REMARK 465 HIS A 404 REMARK 465 HIS A 405 REMARK 465 HIS A 406 REMARK 465 HIS A 407 REMARK 465 HIS A 408 REMARK 465 HIS A 409 REMARK 465 HIS A 410 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 346 CG CD OE1 NE2 REMARK 470 ARG A 354 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 119 OE2 GLU A 119 2365 1.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 381 C - N - CA ANGL. DEV. = 9.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 62 20.92 -75.37 REMARK 500 THR A 65 32.86 -94.78 REMARK 500 THR A 142 -76.90 -124.20 REMARK 500 ASP A 175 103.61 -59.93 REMARK 500 ASN A 206 5.61 -63.02 REMARK 500 LYS A 230 15.06 51.80 REMARK 500 ASP A 238 -155.30 -58.17 REMARK 500 SER A 281 151.96 172.35 REMARK 500 SER A 282 -114.13 -64.94 REMARK 500 ARG A 283 -32.06 74.95 REMARK 500 THR A 294 -58.87 -122.28 REMARK 500 MET A 325 41.03 -80.29 REMARK 500 ARG A 354 78.03 79.78 REMARK 500 GLU A 355 164.48 -49.61 REMARK 500 ASN A 370 63.44 -101.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 501 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 169 OG1 REMARK 620 2 ANP A 500 O1B 91.5 REMARK 620 3 ANP A 500 O2G 155.8 96.0 REMARK 620 4 HOH A 667 O 85.6 170.2 83.1 REMARK 620 5 HOH A 668 O 91.8 106.8 107.8 82.7 REMARK 620 6 HOH A 673 O 77.8 82.8 80.4 87.4 166.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP A 500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1V8J RELATED DB: PDB REMARK 900 COMPLEXED WITH MG-ADP DBREF 1V8K A 1 403 UNP Q922S8 KIF2C_MOUSE 183 585 SEQADV 1V8K HIS A 404 UNP Q922S8 EXPRESSION TAG SEQADV 1V8K HIS A 405 UNP Q922S8 EXPRESSION TAG SEQADV 1V8K HIS A 406 UNP Q922S8 EXPRESSION TAG SEQADV 1V8K HIS A 407 UNP Q922S8 EXPRESSION TAG SEQADV 1V8K HIS A 408 UNP Q922S8 EXPRESSION TAG SEQADV 1V8K HIS A 409 UNP Q922S8 EXPRESSION TAG SEQADV 1V8K HIS A 410 UNP Q922S8 EXPRESSION TAG SEQRES 1 A 410 SER VAL ARG ARG LYS SER CYS ILE VAL LYS GLU MET GLU SEQRES 2 A 410 LYS MET LYS ASN LYS ARG GLU GLU LYS ARG ALA GLN ASN SEQRES 3 A 410 SER GLU LEU ARG ILE LYS ARG ALA GLN GLU TYR ASP SER SEQRES 4 A 410 SER PHE PRO ASN TRP GLU PHE ALA ARG MET ILE LYS GLU SEQRES 5 A 410 PHE ARG VAL THR MET GLU CYS SER PRO LEU THR VAL THR SEQRES 6 A 410 ASP PRO ILE GLU GLU HIS ARG ILE CYS VAL CYS VAL ARG SEQRES 7 A 410 LYS ARG PRO LEU ASN LYS GLN GLU LEU ALA LYS LYS GLU SEQRES 8 A 410 ILE ASP VAL ILE SER VAL PRO SER LYS CYS LEU LEU LEU SEQRES 9 A 410 VAL HIS GLU PRO LYS LEU LYS VAL ASP LEU THR LYS TYR SEQRES 10 A 410 LEU GLU ASN GLN ALA PHE CYS PHE ASP PHE ALA PHE ASP SEQRES 11 A 410 GLU THR ALA SER ASN GLU VAL VAL TYR ARG PHE THR ALA SEQRES 12 A 410 ARG PRO LEU VAL GLN THR ILE PHE GLU GLY GLY LYS ALA SEQRES 13 A 410 THR CYS PHE ALA TYR GLY GLN THR GLY SER GLY LYS THR SEQRES 14 A 410 HIS THR MET GLY GLY ASP LEU SER GLY LYS SER GLN ASN SEQRES 15 A 410 ALA SER LYS GLY ILE TYR ALA MET ALA SER ARG ASP VAL SEQRES 16 A 410 PHE LEU LEU LYS ASN GLN PRO ARG TYR ARG ASN LEU ASN SEQRES 17 A 410 LEU GLU VAL TYR VAL THR PHE PHE GLU ILE TYR ASN GLY SEQRES 18 A 410 LYS VAL PHE ASP LEU LEU ASN LYS LYS ALA LYS LEU ARG SEQRES 19 A 410 VAL LEU GLU ASP SER ARG GLN GLN VAL GLN VAL VAL GLY SEQRES 20 A 410 LEU GLN GLU TYR LEU VAL THR CYS ALA ASP ASP VAL ILE SEQRES 21 A 410 LYS MET ILE ASN MET GLY SER ALA CYS ARG THR SER GLY SEQRES 22 A 410 GLN THR PHE ALA ASN SER ASN SER SER ARG SER HIS ALA SEQRES 23 A 410 CYS PHE GLN ILE LEU LEU ARG THR LYS GLY ARG LEU HIS SEQRES 24 A 410 GLY LYS PHE SER LEU VAL ASP LEU ALA GLY ASN GLU ARG SEQRES 25 A 410 GLY ALA ASP THR SER SER ALA ASP ARG GLN THR ARG MET SEQRES 26 A 410 GLU GLY ALA GLU ILE ASN LYS SER LEU LEU ALA LEU LYS SEQRES 27 A 410 GLU CYS ILE ARG ALA LEU GLY GLN ASN LYS ALA HIS THR SEQRES 28 A 410 PRO PHE ARG GLU SER LYS LEU THR GLN VAL LEU ARG ASP SEQRES 29 A 410 SER PHE ILE GLY GLU ASN SER ARG THR CYS MET ILE ALA SEQRES 30 A 410 MET ILE SER PRO GLY ILE SER SER CYS GLU TYR THR LEU SEQRES 31 A 410 ASN THR LEU ARG TYR ALA ASP ARG VAL LYS GLU LEU SER SEQRES 32 A 410 HIS HIS HIS HIS HIS HIS HIS HET MG A 501 1 HET ANP A 500 31 HETNAM MG MAGNESIUM ION HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER FORMUL 2 MG MG 2+ FORMUL 3 ANP C10 H17 N6 O12 P3 FORMUL 4 HOH *111(H2 O) HELIX 1 1 ASN A 43 GLU A 58 1 16 HELIX 2 2 ASN A 83 LYS A 89 1 7 HELIX 3 3 SER A 134 THR A 142 1 9 HELIX 4 4 ALA A 143 PRO A 145 5 3 HELIX 5 5 LEU A 146 GLU A 152 1 7 HELIX 6 6 GLY A 167 GLY A 174 1 8 HELIX 7 7 ASN A 182 LYS A 185 5 4 HELIX 8 8 GLY A 186 ASN A 200 1 15 HELIX 9 9 GLN A 201 ASN A 206 1 6 HELIX 10 10 CYS A 255 CYS A 269 1 15 HELIX 11 11 GLU A 326 GLY A 345 1 20 HELIX 12 12 SER A 356 LEU A 362 1 7 HELIX 13 13 ARG A 363 GLY A 368 1 6 HELIX 14 14 GLY A 382 SER A 384 5 3 HELIX 15 15 SER A 385 GLU A 401 1 17 SHEET 1 A10 PHE A 127 PHE A 129 0 SHEET 2 A10 ILE A 73 LYS A 79 1 N VAL A 77 O PHE A 129 SHEET 3 A10 SER A 371 ILE A 379 1 O ALA A 377 N CYS A 76 SHEET 4 A10 LYS A 155 GLY A 162 1 N TYR A 161 O MET A 378 SHEET 5 A10 LEU A 298 ASP A 306 1 O VAL A 305 N CYS A 158 SHEET 6 A10 HIS A 285 ARG A 293 -1 N LEU A 292 O HIS A 299 SHEET 7 A10 GLU A 210 TYR A 219 -1 N GLU A 210 O ARG A 293 SHEET 8 A10 LYS A 222 ASP A 225 -1 O LYS A 222 N TYR A 219 SHEET 9 A10 LYS A 232 GLU A 237 -1 O LEU A 233 N VAL A 223 SHEET 10 A10 VAL A 243 VAL A 246 -1 O GLN A 244 N LEU A 236 SHEET 1 B 8 PHE A 127 PHE A 129 0 SHEET 2 B 8 ILE A 73 LYS A 79 1 N VAL A 77 O PHE A 129 SHEET 3 B 8 SER A 371 ILE A 379 1 O ALA A 377 N CYS A 76 SHEET 4 B 8 LYS A 155 GLY A 162 1 N TYR A 161 O MET A 378 SHEET 5 B 8 LEU A 298 ASP A 306 1 O VAL A 305 N CYS A 158 SHEET 6 B 8 HIS A 285 ARG A 293 -1 N LEU A 292 O HIS A 299 SHEET 7 B 8 GLU A 210 TYR A 219 -1 N GLU A 210 O ARG A 293 SHEET 8 B 8 TYR A 251 VAL A 253 -1 O TYR A 251 N VAL A 213 SHEET 1 C 3 ILE A 95 SER A 96 0 SHEET 2 C 3 LEU A 102 LEU A 110 -1 O LEU A 104 N SER A 96 SHEET 3 C 3 LYS A 116 CYS A 124 -1 O PHE A 123 N LEU A 103 LINK OG1 THR A 169 MG MG A 501 1555 1555 2.09 LINK O1B ANP A 500 MG MG A 501 1555 1555 2.12 LINK O2G ANP A 500 MG MG A 501 1555 1555 2.25 LINK MG MG A 501 O HOH A 667 1555 1555 2.23 LINK MG MG A 501 O HOH A 668 1555 1555 2.13 LINK MG MG A 501 O HOH A 673 1555 1555 2.27 SITE 1 AC1 5 THR A 169 ANP A 500 HOH A 667 HOH A 668 SITE 2 AC1 5 HOH A 673 SITE 1 AC2 17 ARG A 78 THR A 164 GLY A 165 SER A 166 SITE 2 AC2 17 GLY A 167 LYS A 168 THR A 169 HIS A 170 SITE 3 AC2 17 LEU A 176 SER A 281 SER A 282 MG A 501 SITE 4 AC2 17 HOH A 608 HOH A 667 HOH A 673 HOH A 682 SITE 5 AC2 17 HOH A 705 CRYST1 61.068 191.475 74.627 90.00 90.00 90.00 C 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016375 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005223 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013400 0.00000