HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 23-JAN-04 1V9B OBSLTE 07-AUG-13 1V9B 4LU8 TITLE CRYSTAL STRUCTURE OF PYROCOCCUS HORIKOSHII CUTA1 COMPLEXED WITH CO2+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPLASMIC DIVALENT CATION TOLERANCE PROTEIN CUTA; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS HORIKOSHII; SOURCE 3 ORGANISM_TAXID: 70601; SOURCE 4 STRAIN: OT3; SOURCE 5 GENE: PH0992; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-11A KEYWDS CUTA, TRIMER, DIVALENT CATION TOLERANCE, STRUCTURAL GENOMICS, RIKEN KEYWDS 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR B.BAGAUTDINOV,T.H.TAHIROV,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 4 07-AUG-13 1V9B 1 OBSLTE REVDAT 3 13-JUL-11 1V9B 1 VERSN REVDAT 2 24-FEB-09 1V9B 1 VERSN REVDAT 1 01-FEB-05 1V9B 0 JRNL AUTH B.BAGAUTDINOV,T.H.TAHIROV JRNL TITL CRYSTAL STRUCTURE OF PYROCOCCUS HORIKOSHII CUTA1 COMPLEXED JRNL TITL 2 WITH CO2+ JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.3 REMARK 3 NUMBER OF REFLECTIONS : 37946 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1896 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.09 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2570 REMARK 3 BIN FREE R VALUE : 0.2780 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 219 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.019 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5250 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 612 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 12.11000 REMARK 3 B22 (A**2) : -5.76000 REMARK 3 B33 (A**2) : -6.35000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.20 REMARK 3 ESD FROM SIGMAA (A) : 0.22 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.27 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.20 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.71 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1V9B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-JAN-04. REMARK 100 THE RCSB ID CODE IS RCSB006368. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-DEC-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-D REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37946 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.44600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CNS 1.1 REMARK 200 STARTING MODEL: 1V99 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 30.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, MES, COBALT (II) ACETATE REMARK 280 TETRAHYDRATE, PH 6.3, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 46.91100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 25.33350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 61.88700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 25.33350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 46.91100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 61.88700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A TRIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -124.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS D 101 113.25 -33.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A3040 DISTANCE = 5.69 ANGSTROMS REMARK 525 HOH B3030 DISTANCE = 7.07 ANGSTROMS REMARK 525 HOH B3042 DISTANCE = 8.89 ANGSTROMS REMARK 525 HOH B3043 DISTANCE = 8.92 ANGSTROMS REMARK 525 HOH B3050 DISTANCE = 5.34 ANGSTROMS REMARK 525 HOH B3052 DISTANCE = 7.06 ANGSTROMS REMARK 525 HOH B3053 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH B3089 DISTANCE = 5.18 ANGSTROMS REMARK 525 HOH B3096 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH B3120 DISTANCE = 5.42 ANGSTROMS REMARK 525 HOH D1034 DISTANCE = 5.56 ANGSTROMS REMARK 525 HOH D1061 DISTANCE = 7.22 ANGSTROMS REMARK 525 HOH D1072 DISTANCE = 6.54 ANGSTROMS REMARK 525 HOH D1077 DISTANCE = 7.05 ANGSTROMS REMARK 525 HOH E3038 DISTANCE = 5.45 ANGSTROMS REMARK 525 HOH E3059 DISTANCE = 7.31 ANGSTROMS REMARK 525 HOH F 121 DISTANCE = 5.74 ANGSTROMS REMARK 525 HOH F 123 DISTANCE = 5.09 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A1001 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 47 OE2 REMARK 620 2 GLU A 15 OE1 97.0 REMARK 620 3 GLU A 15 OE2 125.5 52.5 REMARK 620 4 GLU F 15 OE1 154.3 97.1 80.0 REMARK 620 5 GLU F 15 OE2 101.1 106.4 128.4 54.2 REMARK 620 6 GLU F 15 CD 127.6 104.6 105.2 27.2 27.0 REMARK 620 7 GLU A 15 CD 107.5 27.0 27.0 94.6 126.1 113.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A1002 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B3020 O REMARK 620 2 HOH C3032 O 92.8 REMARK 620 3 HOH B3014 O 87.7 89.9 REMARK 620 4 HOH C3014 O 87.0 86.9 173.6 REMARK 620 5 HOH A3009 O 103.0 162.0 99.2 85.4 REMARK 620 6 HOH A3029 O 170.2 81.1 84.6 100.3 84.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO D1003 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH F 181 O REMARK 620 2 HOH E3045 O 86.5 REMARK 620 3 HOH D1052 O 88.6 80.2 REMARK 620 4 HOH D1044 O 171.1 93.9 82.7 REMARK 620 5 HOH E3016 O 91.8 88.2 168.4 97.1 REMARK 620 6 HOH F 108 O 77.2 162.4 92.9 101.3 98.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO D 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 3003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 3004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 3005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 3006 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1V99 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH CU2+ REMARK 900 RELATED ID: PHO001000992.1 RELATED DB: TARGETDB DBREF 1V9B A 1 102 UNP O58720 CUTA_PYRHO 1 102 DBREF 1V9B B 1 102 UNP O58720 CUTA_PYRHO 1 102 DBREF 1V9B C 1 102 UNP O58720 CUTA_PYRHO 1 102 DBREF 1V9B D 1 102 UNP O58720 CUTA_PYRHO 1 102 DBREF 1V9B E 1 102 UNP O58720 CUTA_PYRHO 1 102 DBREF 1V9B F 1 102 UNP O58720 CUTA_PYRHO 1 102 SEQADV 1V9B CSW A 29 UNP O58720 CYS 29 MODIFIED RESIDUE SEQADV 1V9B CSW B 29 UNP O58720 CYS 29 MODIFIED RESIDUE SEQADV 1V9B CSW C 29 UNP O58720 CYS 29 MODIFIED RESIDUE SEQADV 1V9B CSW D 29 UNP O58720 CYS 29 MODIFIED RESIDUE SEQADV 1V9B CSW E 29 UNP O58720 CYS 29 MODIFIED RESIDUE SEQADV 1V9B CSW F 29 UNP O58720 CYS 29 MODIFIED RESIDUE SEQRES 1 A 102 MET ILE ILE VAL TYR THR THR PHE PRO ASP TRP GLU SER SEQRES 2 A 102 ALA GLU LYS VAL VAL LYS THR LEU LEU LYS GLU ARG LEU SEQRES 3 A 102 ILE ALA CSW ALA ASN LEU ARG GLU HIS ARG ALA PHE TYR SEQRES 4 A 102 TRP TRP GLU GLY LYS ILE GLU GLU ASP LYS GLU VAL GLY SEQRES 5 A 102 ALA ILE LEU LYS THR ARG GLU ASP LEU TRP GLU GLU LEU SEQRES 6 A 102 LYS GLU ARG ILE LYS GLU LEU HIS PRO TYR ASP VAL PRO SEQRES 7 A 102 ALA ILE ILE ARG ILE ASP VAL ASP ASP VAL ASN GLU ASP SEQRES 8 A 102 TYR LEU LYS TRP LEU ILE GLU GLU THR LYS LYS SEQRES 1 B 102 MET ILE ILE VAL TYR THR THR PHE PRO ASP TRP GLU SER SEQRES 2 B 102 ALA GLU LYS VAL VAL LYS THR LEU LEU LYS GLU ARG LEU SEQRES 3 B 102 ILE ALA CSW ALA ASN LEU ARG GLU HIS ARG ALA PHE TYR SEQRES 4 B 102 TRP TRP GLU GLY LYS ILE GLU GLU ASP LYS GLU VAL GLY SEQRES 5 B 102 ALA ILE LEU LYS THR ARG GLU ASP LEU TRP GLU GLU LEU SEQRES 6 B 102 LYS GLU ARG ILE LYS GLU LEU HIS PRO TYR ASP VAL PRO SEQRES 7 B 102 ALA ILE ILE ARG ILE ASP VAL ASP ASP VAL ASN GLU ASP SEQRES 8 B 102 TYR LEU LYS TRP LEU ILE GLU GLU THR LYS LYS SEQRES 1 C 102 MET ILE ILE VAL TYR THR THR PHE PRO ASP TRP GLU SER SEQRES 2 C 102 ALA GLU LYS VAL VAL LYS THR LEU LEU LYS GLU ARG LEU SEQRES 3 C 102 ILE ALA CSW ALA ASN LEU ARG GLU HIS ARG ALA PHE TYR SEQRES 4 C 102 TRP TRP GLU GLY LYS ILE GLU GLU ASP LYS GLU VAL GLY SEQRES 5 C 102 ALA ILE LEU LYS THR ARG GLU ASP LEU TRP GLU GLU LEU SEQRES 6 C 102 LYS GLU ARG ILE LYS GLU LEU HIS PRO TYR ASP VAL PRO SEQRES 7 C 102 ALA ILE ILE ARG ILE ASP VAL ASP ASP VAL ASN GLU ASP SEQRES 8 C 102 TYR LEU LYS TRP LEU ILE GLU GLU THR LYS LYS SEQRES 1 D 102 MET ILE ILE VAL TYR THR THR PHE PRO ASP TRP GLU SER SEQRES 2 D 102 ALA GLU LYS VAL VAL LYS THR LEU LEU LYS GLU ARG LEU SEQRES 3 D 102 ILE ALA CSW ALA ASN LEU ARG GLU HIS ARG ALA PHE TYR SEQRES 4 D 102 TRP TRP GLU GLY LYS ILE GLU GLU ASP LYS GLU VAL GLY SEQRES 5 D 102 ALA ILE LEU LYS THR ARG GLU ASP LEU TRP GLU GLU LEU SEQRES 6 D 102 LYS GLU ARG ILE LYS GLU LEU HIS PRO TYR ASP VAL PRO SEQRES 7 D 102 ALA ILE ILE ARG ILE ASP VAL ASP ASP VAL ASN GLU ASP SEQRES 8 D 102 TYR LEU LYS TRP LEU ILE GLU GLU THR LYS LYS SEQRES 1 E 102 MET ILE ILE VAL TYR THR THR PHE PRO ASP TRP GLU SER SEQRES 2 E 102 ALA GLU LYS VAL VAL LYS THR LEU LEU LYS GLU ARG LEU SEQRES 3 E 102 ILE ALA CSW ALA ASN LEU ARG GLU HIS ARG ALA PHE TYR SEQRES 4 E 102 TRP TRP GLU GLY LYS ILE GLU GLU ASP LYS GLU VAL GLY SEQRES 5 E 102 ALA ILE LEU LYS THR ARG GLU ASP LEU TRP GLU GLU LEU SEQRES 6 E 102 LYS GLU ARG ILE LYS GLU LEU HIS PRO TYR ASP VAL PRO SEQRES 7 E 102 ALA ILE ILE ARG ILE ASP VAL ASP ASP VAL ASN GLU ASP SEQRES 8 E 102 TYR LEU LYS TRP LEU ILE GLU GLU THR LYS LYS SEQRES 1 F 102 MET ILE ILE VAL TYR THR THR PHE PRO ASP TRP GLU SER SEQRES 2 F 102 ALA GLU LYS VAL VAL LYS THR LEU LEU LYS GLU ARG LEU SEQRES 3 F 102 ILE ALA CSW ALA ASN LEU ARG GLU HIS ARG ALA PHE TYR SEQRES 4 F 102 TRP TRP GLU GLY LYS ILE GLU GLU ASP LYS GLU VAL GLY SEQRES 5 F 102 ALA ILE LEU LYS THR ARG GLU ASP LEU TRP GLU GLU LEU SEQRES 6 F 102 LYS GLU ARG ILE LYS GLU LEU HIS PRO TYR ASP VAL PRO SEQRES 7 F 102 ALA ILE ILE ARG ILE ASP VAL ASP ASP VAL ASN GLU ASP SEQRES 8 F 102 TYR LEU LYS TRP LEU ILE GLU GLU THR LYS LYS MODRES 1V9B CSW A 29 CYS CYSTEINE-S-DIOXIDE MODRES 1V9B CSW B 29 CYS CYSTEINE-S-DIOXIDE MODRES 1V9B CSW C 29 CYS CYSTEINE-S-DIOXIDE MODRES 1V9B CSW D 29 CYS CYSTEINE-S-DIOXIDE MODRES 1V9B CSW E 29 CYS CYSTEINE-S-DIOXIDE MODRES 1V9B CSW F 29 CYS CYSTEINE-S-DIOXIDE HET CSW A 29 8 HET CSW B 29 8 HET CSW C 29 8 HET CSW D 29 8 HET CSW E 29 8 HET CSW F 29 8 HET CO A1001 1 HET CO A1002 1 HET CO D1003 1 HET SO4 A3001 5 HET SO4 A3002 5 HET SO4 C3003 5 HET SO4 E3004 5 HET SO4 B3005 5 HET SO4 B3006 5 HETNAM CSW CYSTEINE-S-DIOXIDE HETNAM CO COBALT (II) ION HETNAM SO4 SULFATE ION HETSYN CSW CYSTEINE SULFINIC ACID FORMUL 1 CSW 6(C3 H7 N O4 S) FORMUL 7 CO 3(CO 2+) FORMUL 10 SO4 6(O4 S 2-) FORMUL 16 HOH *612(H2 O) HELIX 1 1 ASP A 10 GLU A 24 1 15 HELIX 2 2 ARG A 58 ASP A 60 5 3 HELIX 3 3 LEU A 61 HIS A 73 1 13 HELIX 4 4 ASN A 89 THR A 100 1 12 HELIX 5 5 ASP B 10 GLU B 24 1 15 HELIX 6 6 ARG B 58 ASP B 60 5 3 HELIX 7 7 LEU B 61 HIS B 73 1 13 HELIX 8 8 ASN B 89 THR B 100 1 12 HELIX 9 9 ASP C 10 GLU C 24 1 15 HELIX 10 10 ARG C 58 ASP C 60 5 3 HELIX 11 11 LEU C 61 HIS C 73 1 13 HELIX 12 12 ASN C 89 THR C 100 1 12 HELIX 13 13 ASP D 10 GLU D 24 1 15 HELIX 14 14 ARG D 58 ASP D 60 5 3 HELIX 15 15 LEU D 61 HIS D 73 1 13 HELIX 16 16 ASN D 89 THR D 100 1 12 HELIX 17 17 ASP E 10 GLU E 24 1 15 HELIX 18 18 ARG E 58 ASP E 60 5 3 HELIX 19 19 LEU E 61 HIS E 73 1 13 HELIX 20 20 ASN E 89 THR E 100 1 12 HELIX 21 21 ASP F 10 GLU F 24 1 15 HELIX 22 22 ARG F 58 ASP F 60 5 3 HELIX 23 23 LEU F 61 HIS F 73 1 13 HELIX 24 24 ASN F 89 THR F 100 1 12 SHEET 1 A21 ASP A 87 VAL A 88 0 SHEET 2 A21 ILE C 81 ASP C 84 -1 N ARG C 82 O ASP A 87 SHEET 3 A21 ILE C 2 PHE C 8 -1 O ILE C 3 N ILE C 83 SHEET 4 A21 LYS C 44 THR C 57 -1 N VAL C 51 O PHE C 8 SHEET 5 A21 ASN C 31 TRP C 41 -1 O ASN C 31 N ILE C 54 SHEET 6 A21 ASN A 31 TRP A 40 1 O LEU A 32 N ARG C 36 SHEET 7 A21 ASN B 31 TRP B 41 -1 O LEU B 32 N ARG A 36 SHEET 8 A21 LYS B 44 THR B 57 -1 O LYS B 44 N TRP B 41 SHEET 9 A21 ILE B 2 PHE B 8 -1 N ILE B 2 O THR B 57 SHEET 10 A21 ILE B 81 ASP B 84 -1 N ILE B 81 O TYR B 5 SHEET 11 A21 ASP C 87 VAL C 88 -1 O ASP C 87 N ARG B 82 SHEET 12 A21 ILE B 81 ASP B 84 -1 N ARG B 82 O ASP C 87 SHEET 13 A21 ILE B 2 PHE B 8 -1 O ILE B 3 N ILE B 83 SHEET 14 A21 LYS B 44 THR B 57 -1 N VAL B 51 O PHE B 8 SHEET 15 A21 ASN B 31 TRP B 41 -1 O ASN B 31 N ILE B 54 SHEET 16 A21 ASN C 31 TRP C 41 -1 O LEU C 32 N ARG B 36 SHEET 17 A21 ASN A 31 TRP A 40 1 O LEU A 32 N ARG C 36 SHEET 18 A21 ILE A 45 THR A 57 -1 N GLU A 46 O TYR A 39 SHEET 19 A21 ILE A 2 PHE A 8 -1 N ILE A 2 O THR A 57 SHEET 20 A21 ILE A 81 ASP A 84 -1 N ILE A 81 O TYR A 5 SHEET 21 A21 ASP B 87 VAL B 88 -1 O ASP B 87 N ARG A 82 SHEET 1 B21 ASP D 87 VAL D 88 0 SHEET 2 B21 ILE F 81 ASP F 84 -1 N ARG F 82 O ASP D 87 SHEET 3 B21 ILE F 2 PHE F 8 -1 O ILE F 3 N ILE F 83 SHEET 4 B21 LYS F 44 THR F 57 -1 N VAL F 51 O PHE F 8 SHEET 5 B21 ASN F 31 TRP F 41 -1 O ASN F 31 N ILE F 54 SHEET 6 B21 ASN D 31 TRP D 41 1 O LEU D 32 N ARG F 36 SHEET 7 B21 ASN E 31 TRP E 41 -1 O LEU E 32 N ARG D 36 SHEET 8 B21 LYS E 44 THR E 57 -1 O LYS E 44 N TRP E 41 SHEET 9 B21 ILE E 2 PHE E 8 -1 N ILE E 2 O THR E 57 SHEET 10 B21 ILE E 81 ASP E 84 -1 O ILE E 81 N TYR E 5 SHEET 11 B21 ASP F 87 VAL F 88 -1 O ASP F 87 N ARG E 82 SHEET 12 B21 ILE E 81 ASP E 84 -1 N ARG E 82 O ASP F 87 SHEET 13 B21 ILE E 2 PHE E 8 -1 O ILE E 3 N ILE E 83 SHEET 14 B21 LYS E 44 THR E 57 -1 N VAL E 51 O PHE E 8 SHEET 15 B21 ASN E 31 TRP E 41 -1 N ASN E 31 O ILE E 54 SHEET 16 B21 ASN F 31 TRP F 41 -1 O LEU F 32 N ARG E 36 SHEET 17 B21 ASN D 31 TRP D 41 1 O LEU D 32 N ARG F 36 SHEET 18 B21 LYS D 44 THR D 57 -1 O LYS D 44 N TRP D 41 SHEET 19 B21 ILE D 2 PHE D 8 -1 N ILE D 2 O THR D 57 SHEET 20 B21 ILE D 81 ASP D 84 -1 N ILE D 81 O TYR D 5 SHEET 21 B21 ASP E 87 VAL E 88 -1 O ASP E 87 N ARG D 82 LINK C ALA A 28 N CSW A 29 1555 1555 1.33 LINK C CSW A 29 N ALA A 30 1555 1555 1.33 LINK CO CO A1001 OE2 GLU C 47 1555 1555 2.11 LINK CO CO A1001 OE1 GLU A 15 1555 1555 2.55 LINK CO CO A1001 OE2 GLU A 15 1555 1555 2.42 LINK CO CO A1001 OE1 GLU F 15 1555 1555 2.53 LINK CO CO A1001 OE2 GLU F 15 1555 1555 2.27 LINK CO CO A1002 O HOH B3020 1555 1555 2.18 LINK CO CO A1002 O HOH C3032 1555 1555 2.46 LINK CO CO A1002 O HOH B3014 1555 1555 2.38 LINK CO CO A1002 O HOH C3014 1555 1555 2.32 LINK CO CO A1002 O HOH A3009 1555 1555 2.32 LINK CO CO A1002 O HOH A3029 1555 1555 2.40 LINK C ALA B 28 N CSW B 29 1555 1555 1.33 LINK C CSW B 29 N ALA B 30 1555 1555 1.33 LINK C ALA C 28 N CSW C 29 1555 1555 1.33 LINK C CSW C 29 N ALA C 30 1555 1555 1.33 LINK C ALA D 28 N CSW D 29 1555 1555 1.33 LINK C CSW D 29 N ALA D 30 1555 1555 1.33 LINK CO CO D1003 O HOH F 181 1555 1555 2.32 LINK CO CO D1003 O HOH E3045 1555 1555 2.51 LINK CO CO D1003 O HOH D1052 1555 1555 2.31 LINK CO CO D1003 O HOH D1044 1555 1555 2.36 LINK CO CO D1003 O HOH E3016 1555 1555 2.26 LINK CO CO D1003 O HOH F 108 1555 1555 2.40 LINK C ALA E 28 N CSW E 29 1555 1555 1.33 LINK C CSW E 29 N ALA E 30 1555 1555 1.33 LINK C ALA F 28 N CSW F 29 1555 1555 1.33 LINK C CSW F 29 N ALA F 30 1555 1555 1.33 LINK CD GLU F 15 CO CO A1001 1555 1555 2.72 LINK CD GLU A 15 CO CO A1001 1555 1555 2.75 SITE 1 AC1 3 GLU A 15 GLU C 47 GLU F 15 SITE 1 AC2 6 HOH A3009 HOH A3029 HOH B3014 HOH B3020 SITE 2 AC2 6 HOH C3014 HOH C3032 SITE 1 AC3 6 HOH D1044 HOH D1052 HOH E3016 HOH E3045 SITE 2 AC3 6 HOH F 108 HOH F 181 SITE 1 AC4 4 MET A 1 GLU A 59 LEU A 93 HOH A3024 SITE 1 AC5 5 TRP A 41 TYR A 75 ASP A 76 VAL A 77 SITE 2 AC5 5 HOH A3099 SITE 1 AC6 6 LYS B 23 TYR C 75 ASP C 76 VAL C 77 SITE 2 AC6 6 HOH C3067 HOH C3073 SITE 1 AC7 6 ARG D 33 ILE D 54 ARG E 33 ILE E 54 SITE 2 AC7 6 ARG F 33 ILE F 54 SITE 1 AC8 7 ARG A 33 ILE A 54 ARG B 33 ILE B 54 SITE 2 AC8 7 HOH B3046 ARG C 33 ILE C 54 SITE 1 AC9 5 MET B 1 ARG B 58 GLU B 59 LEU B 93 SITE 2 AC9 5 HOH B3018 CRYST1 93.822 123.774 50.667 90.00 90.00 90.00 P 21 21 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010660 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008080 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019740 0.00000