HEADER LECTIN 08-JAN-96 1VAM TITLE CONCANAVALIN A COMPLEX WITH 4'-NITROPHENYL-ALPHA-D-MANNOPYRANOSIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONCANAVALIN A; COMPND 3 CHAIN: A, B, C, D SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANAVALIA ENSIFORMIS; SOURCE 3 ORGANISM_COMMON: JACK BEAN; SOURCE 4 ORGANISM_TAXID: 3823 KEYWDS LEGUME LECTIN, LECTIN EXPDTA X-RAY DIFFRACTION AUTHOR P.N.KANELLOPOULOS,P.A.TUCKER,S.J.HAMODRAKAS REVDAT 4 14-FEB-24 1VAM 1 HETSYN REVDAT 3 29-JUL-20 1VAM 1 COMPND REMARK SEQADV HETNAM REVDAT 3 2 1 LINK SITE REVDAT 2 24-FEB-09 1VAM 1 VERSN REVDAT 1 11-JAN-97 1VAM 0 JRNL AUTH P.N.KANELLOPOULOS,K.PAVLOU,A.PERRAKIS,B.AGIANIAN, JRNL AUTH 2 C.E.VORGIAS,C.MAVROMMATIS,M.SOUFI,P.A.TUCKER,S.J.HAMODRAKAS JRNL TITL THE CRYSTAL STRUCTURE OF THE COMPLEXES OF CONCANAVALIN A JRNL TITL 2 WITH 4'-NITROPHENYL-ALPHA-D-MANNOPYRANOSIDE AND JRNL TITL 3 4'-NITROPHENYL-ALPHA-D-GLUCOPYRANOSIDE. JRNL REF J.STRUCT.BIOL. V. 116 345 1996 JRNL REFN ISSN 1047-8477 JRNL PMID 8812993 JRNL DOI 10.1006/JSBI.1996.0052 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 33256 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7236 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 92 REMARK 3 SOLVENT ATOMS : 32 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 26.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.300 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1VAM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000177003. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-94 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38810 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 48.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.12500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR 3.1 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 67.59500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 77.69000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 67.59500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 77.69000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -114.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU C 99 CA - CB - CG ANGL. DEV. = 13.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 21 31.63 -67.41 REMARK 500 GLN A 43 79.97 -111.79 REMARK 500 ASN A 104 72.13 -103.44 REMARK 500 SER A 108 141.82 175.87 REMARK 500 HIS A 121 -22.29 85.67 REMARK 500 THR A 150 100.45 -57.91 REMARK 500 ASP A 218 36.72 -94.37 REMARK 500 ASP A 235 -154.04 -114.37 REMARK 500 PRO B 20 -173.21 -66.98 REMARK 500 VAL B 84 -30.38 -131.07 REMARK 500 MET B 129 116.77 -164.88 REMARK 500 LYS B 138 0.59 -51.12 REMARK 500 HIS B 180 73.65 -101.83 REMARK 500 THR B 226 -169.45 -72.30 REMARK 500 LEU B 230 26.53 48.85 REMARK 500 SER C 21 38.36 -92.58 REMARK 500 LYS C 30 8.36 59.63 REMARK 500 VAL C 84 -43.37 -132.67 REMARK 500 ASN C 104 73.76 -116.83 REMARK 500 THR C 150 93.05 -57.84 REMARK 500 SER C 164 128.65 -38.83 REMARK 500 SER C 168 40.38 39.57 REMARK 500 SER C 204 32.29 -77.08 REMARK 500 HIS C 205 84.91 -158.90 REMARK 500 ILE C 217 -54.11 -29.12 REMARK 500 LEU C 230 31.73 38.66 REMARK 500 ALA C 236 45.85 -101.87 REMARK 500 SER D 21 38.59 -70.08 REMARK 500 SER D 31 149.70 -170.91 REMARK 500 LYS D 59 53.94 37.06 REMARK 500 ASN D 69 57.82 37.21 REMARK 500 VAL D 84 -29.16 -140.98 REMARK 500 ASN D 104 69.76 -116.70 REMARK 500 GLU D 122 66.11 -118.59 REMARK 500 THR D 150 101.52 -56.86 REMARK 500 TRP D 182 139.13 177.25 REMARK 500 SER D 184 -30.53 -38.32 REMARK 500 ASP D 203 155.08 173.92 REMARK 500 SER D 204 27.78 -72.67 REMARK 500 ALA D 207 149.45 179.78 REMARK 500 THR D 226 -176.16 -65.81 REMARK 500 LEU D 230 17.77 51.26 REMARK 500 ALA D 236 49.71 -96.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 238 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 8 OE2 REMARK 620 2 ASP A 10 OD2 92.4 REMARK 620 3 ASP A 19 OD1 173.3 92.7 REMARK 620 4 HIS A 24 NE2 95.4 82.7 89.5 REMARK 620 5 HOH A 247 O 90.4 88.4 85.5 169.6 REMARK 620 6 HOH A 248 O 97.1 169.6 77.5 100.6 87.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 239 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 10 OD1 REMARK 620 2 ASP A 10 OD2 53.0 REMARK 620 3 TYR A 12 O 79.8 122.0 REMARK 620 4 ASN A 14 OD1 155.8 143.8 92.8 REMARK 620 5 ASP A 19 OD2 105.4 74.8 90.1 97.6 REMARK 620 6 HOH A 242 O 75.4 96.9 102.0 83.7 167.8 REMARK 620 7 HOH A 249 O 111.3 67.9 168.8 76.6 87.9 80.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 238 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 8 OE2 REMARK 620 2 ASP B 10 OD2 101.4 REMARK 620 3 ASP B 19 OD1 173.2 82.8 REMARK 620 4 HIS B 24 NE2 88.5 87.2 86.3 REMARK 620 5 HOH B 245 O 82.6 162.6 91.9 75.9 REMARK 620 6 HOH B 246 O 91.5 90.4 93.9 177.5 106.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 239 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 10 OD1 REMARK 620 2 ASP B 10 OD2 52.7 REMARK 620 3 TYR B 12 O 78.6 100.9 REMARK 620 4 ASN B 14 OD1 145.2 155.2 74.9 REMARK 620 5 ASP B 19 OD2 119.6 79.2 77.3 76.0 REMARK 620 6 HOH B 247 O 67.8 118.4 79.6 85.3 153.4 REMARK 620 7 HOH B 248 O 109.0 85.1 172.3 97.6 99.3 101.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 238 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 8 OE2 REMARK 620 2 ASP C 10 OD2 94.4 REMARK 620 3 ASP C 19 OD1 164.5 101.0 REMARK 620 4 HIS C 24 NE2 90.0 90.6 87.8 REMARK 620 5 HOH C 245 O 82.0 173.7 82.5 84.2 REMARK 620 6 HOH C 246 O 90.2 92.0 91.2 177.3 93.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 239 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 10 OD1 REMARK 620 2 ASP C 10 OD2 51.2 REMARK 620 3 TYR C 12 O 76.5 111.8 REMARK 620 4 ASN C 14 OD1 145.9 162.8 80.8 REMARK 620 5 ASP C 19 OD2 110.1 76.8 85.8 93.1 REMARK 620 6 HOH C 247 O 108.0 78.3 168.8 90.5 101.7 REMARK 620 7 HOH C 248 O 68.9 110.3 80.8 82.6 166.4 91.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D 238 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 8 OE2 REMARK 620 2 ASP D 10 OD2 96.0 REMARK 620 3 ASP D 19 OD1 169.4 90.2 REMARK 620 4 HIS D 24 NE2 99.1 100.1 88.3 REMARK 620 5 HOH D 243 O 96.4 162.6 75.8 90.0 REMARK 620 6 HOH D 247 O 90.7 87.8 80.9 166.7 79.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 239 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 10 OD1 REMARK 620 2 ASP D 10 OD2 54.6 REMARK 620 3 TYR D 12 O 84.5 117.5 REMARK 620 4 ASN D 14 OD1 150.8 154.5 77.1 REMARK 620 5 ASP D 19 OD2 119.4 79.6 84.4 81.4 REMARK 620 6 HOH D 245 O 71.1 104.5 103.2 91.1 168.0 REMARK 620 7 HOH D 246 O 112.7 71.4 161.6 89.2 81.4 89.1 REMARK 620 N 1 2 3 4 5 6 DBREF 1VAM A 119 237 UNP P02866 CONA_CANEN 30 148 DBREF 1VAM B 119 237 UNP P02866 CONA_CANEN 30 148 DBREF 1VAM C 119 237 UNP P02866 CONA_CANEN 30 148 DBREF 1VAM D 119 237 UNP P02866 CONA_CANEN 30 148 SEQADV 1VAM ASP A 151 UNP P02866 GLU 62 CONFLICT SEQADV 1VAM GLU A 155 UNP P02866 ARG 66 CONFLICT SEQADV 1VAM ASP B 151 UNP P02866 GLU 62 CONFLICT SEQADV 1VAM GLU B 155 UNP P02866 ARG 66 CONFLICT SEQADV 1VAM ASP C 151 UNP P02866 GLU 62 CONFLICT SEQADV 1VAM GLU C 155 UNP P02866 ARG 66 CONFLICT SEQADV 1VAM ASP D 151 UNP P02866 GLU 62 CONFLICT SEQADV 1VAM GLU D 155 UNP P02866 ARG 66 CONFLICT SEQRES 1 A 237 ALA ASP THR ILE VAL ALA VAL GLU LEU ASP THR TYR PRO SEQRES 2 A 237 ASN THR ASP ILE GLY ASP PRO SER TYR PRO HIS ILE GLY SEQRES 3 A 237 ILE ASP ILE LYS SER VAL ARG SER LYS LYS THR ALA LYS SEQRES 4 A 237 TRP ASN MET GLN ASN GLY LYS VAL GLY THR ALA HIS ILE SEQRES 5 A 237 ILE TYR ASN SER VAL ASP LYS ARG LEU SER ALA VAL VAL SEQRES 6 A 237 SER TYR PRO ASN ALA ASP SER ALA THR VAL SER TYR ASP SEQRES 7 A 237 VAL ASP LEU ASP ASN VAL LEU PRO GLU TRP VAL ARG VAL SEQRES 8 A 237 GLY LEU SER ALA SER THR GLY LEU TYR LYS GLU THR ASN SEQRES 9 A 237 THR ILE LEU SER TRP SER PHE THR SER LYS LEU LYS SER SEQRES 10 A 237 ASN SER THR HIS GLU THR ASN ALA LEU HIS PHE MET PHE SEQRES 11 A 237 ASN GLN PHE SER LYS ASP GLN LYS ASP LEU ILE LEU GLN SEQRES 12 A 237 GLY ASP ALA THR THR GLY THR ASP GLY ASN LEU GLU LEU SEQRES 13 A 237 THR ARG VAL SER SER ASN GLY SER PRO GLN GLY SER SER SEQRES 14 A 237 VAL GLY ARG ALA LEU PHE TYR ALA PRO VAL HIS ILE TRP SEQRES 15 A 237 GLU SER SER ALA VAL VAL ALA SER PHE GLU ALA THR PHE SEQRES 16 A 237 THR PHE LEU ILE LYS SER PRO ASP SER HIS PRO ALA ASP SEQRES 17 A 237 GLY ILE ALA PHE PHE ILE SER ASN ILE ASP SER SER ILE SEQRES 18 A 237 PRO SER GLY SER THR GLY ARG LEU LEU GLY LEU PHE PRO SEQRES 19 A 237 ASP ALA ASN SEQRES 1 B 237 ALA ASP THR ILE VAL ALA VAL GLU LEU ASP THR TYR PRO SEQRES 2 B 237 ASN THR ASP ILE GLY ASP PRO SER TYR PRO HIS ILE GLY SEQRES 3 B 237 ILE ASP ILE LYS SER VAL ARG SER LYS LYS THR ALA LYS SEQRES 4 B 237 TRP ASN MET GLN ASN GLY LYS VAL GLY THR ALA HIS ILE SEQRES 5 B 237 ILE TYR ASN SER VAL ASP LYS ARG LEU SER ALA VAL VAL SEQRES 6 B 237 SER TYR PRO ASN ALA ASP SER ALA THR VAL SER TYR ASP SEQRES 7 B 237 VAL ASP LEU ASP ASN VAL LEU PRO GLU TRP VAL ARG VAL SEQRES 8 B 237 GLY LEU SER ALA SER THR GLY LEU TYR LYS GLU THR ASN SEQRES 9 B 237 THR ILE LEU SER TRP SER PHE THR SER LYS LEU LYS SER SEQRES 10 B 237 ASN SER THR HIS GLU THR ASN ALA LEU HIS PHE MET PHE SEQRES 11 B 237 ASN GLN PHE SER LYS ASP GLN LYS ASP LEU ILE LEU GLN SEQRES 12 B 237 GLY ASP ALA THR THR GLY THR ASP GLY ASN LEU GLU LEU SEQRES 13 B 237 THR ARG VAL SER SER ASN GLY SER PRO GLN GLY SER SER SEQRES 14 B 237 VAL GLY ARG ALA LEU PHE TYR ALA PRO VAL HIS ILE TRP SEQRES 15 B 237 GLU SER SER ALA VAL VAL ALA SER PHE GLU ALA THR PHE SEQRES 16 B 237 THR PHE LEU ILE LYS SER PRO ASP SER HIS PRO ALA ASP SEQRES 17 B 237 GLY ILE ALA PHE PHE ILE SER ASN ILE ASP SER SER ILE SEQRES 18 B 237 PRO SER GLY SER THR GLY ARG LEU LEU GLY LEU PHE PRO SEQRES 19 B 237 ASP ALA ASN SEQRES 1 C 237 ALA ASP THR ILE VAL ALA VAL GLU LEU ASP THR TYR PRO SEQRES 2 C 237 ASN THR ASP ILE GLY ASP PRO SER TYR PRO HIS ILE GLY SEQRES 3 C 237 ILE ASP ILE LYS SER VAL ARG SER LYS LYS THR ALA LYS SEQRES 4 C 237 TRP ASN MET GLN ASN GLY LYS VAL GLY THR ALA HIS ILE SEQRES 5 C 237 ILE TYR ASN SER VAL ASP LYS ARG LEU SER ALA VAL VAL SEQRES 6 C 237 SER TYR PRO ASN ALA ASP SER ALA THR VAL SER TYR ASP SEQRES 7 C 237 VAL ASP LEU ASP ASN VAL LEU PRO GLU TRP VAL ARG VAL SEQRES 8 C 237 GLY LEU SER ALA SER THR GLY LEU TYR LYS GLU THR ASN SEQRES 9 C 237 THR ILE LEU SER TRP SER PHE THR SER LYS LEU LYS SER SEQRES 10 C 237 ASN SER THR HIS GLU THR ASN ALA LEU HIS PHE MET PHE SEQRES 11 C 237 ASN GLN PHE SER LYS ASP GLN LYS ASP LEU ILE LEU GLN SEQRES 12 C 237 GLY ASP ALA THR THR GLY THR ASP GLY ASN LEU GLU LEU SEQRES 13 C 237 THR ARG VAL SER SER ASN GLY SER PRO GLN GLY SER SER SEQRES 14 C 237 VAL GLY ARG ALA LEU PHE TYR ALA PRO VAL HIS ILE TRP SEQRES 15 C 237 GLU SER SER ALA VAL VAL ALA SER PHE GLU ALA THR PHE SEQRES 16 C 237 THR PHE LEU ILE LYS SER PRO ASP SER HIS PRO ALA ASP SEQRES 17 C 237 GLY ILE ALA PHE PHE ILE SER ASN ILE ASP SER SER ILE SEQRES 18 C 237 PRO SER GLY SER THR GLY ARG LEU LEU GLY LEU PHE PRO SEQRES 19 C 237 ASP ALA ASN SEQRES 1 D 237 ALA ASP THR ILE VAL ALA VAL GLU LEU ASP THR TYR PRO SEQRES 2 D 237 ASN THR ASP ILE GLY ASP PRO SER TYR PRO HIS ILE GLY SEQRES 3 D 237 ILE ASP ILE LYS SER VAL ARG SER LYS LYS THR ALA LYS SEQRES 4 D 237 TRP ASN MET GLN ASN GLY LYS VAL GLY THR ALA HIS ILE SEQRES 5 D 237 ILE TYR ASN SER VAL ASP LYS ARG LEU SER ALA VAL VAL SEQRES 6 D 237 SER TYR PRO ASN ALA ASP SER ALA THR VAL SER TYR ASP SEQRES 7 D 237 VAL ASP LEU ASP ASN VAL LEU PRO GLU TRP VAL ARG VAL SEQRES 8 D 237 GLY LEU SER ALA SER THR GLY LEU TYR LYS GLU THR ASN SEQRES 9 D 237 THR ILE LEU SER TRP SER PHE THR SER LYS LEU LYS SER SEQRES 10 D 237 ASN SER THR HIS GLU THR ASN ALA LEU HIS PHE MET PHE SEQRES 11 D 237 ASN GLN PHE SER LYS ASP GLN LYS ASP LEU ILE LEU GLN SEQRES 12 D 237 GLY ASP ALA THR THR GLY THR ASP GLY ASN LEU GLU LEU SEQRES 13 D 237 THR ARG VAL SER SER ASN GLY SER PRO GLN GLY SER SER SEQRES 14 D 237 VAL GLY ARG ALA LEU PHE TYR ALA PRO VAL HIS ILE TRP SEQRES 15 D 237 GLU SER SER ALA VAL VAL ALA SER PHE GLU ALA THR PHE SEQRES 16 D 237 THR PHE LEU ILE LYS SER PRO ASP SER HIS PRO ALA ASP SEQRES 17 D 237 GLY ILE ALA PHE PHE ILE SER ASN ILE ASP SER SER ILE SEQRES 18 D 237 PRO SER GLY SER THR GLY ARG LEU LEU GLY LEU PHE PRO SEQRES 19 D 237 ASP ALA ASN HET PNA A 240 21 HET MN A 238 1 HET CA A 239 1 HET PNA B 240 21 HET MN B 238 1 HET CA B 239 1 HET PNA C 240 21 HET MN C 238 1 HET CA C 239 1 HET PNA D 240 21 HET MN D 238 1 HET CA D 239 1 HETNAM PNA 4-NITROPHENYL ALPHA-D-MANNOPYRANOSIDE HETNAM MN MANGANESE (II) ION HETNAM CA CALCIUM ION HETSYN PNA 4'-NITROPHENYL-ALPHA-D-MANNOPYRANOSIDE; 4-NITROPHENYL HETSYN 2 PNA ALPHA-D-MANNOSIDE; 4-NITROPHENYL D-MANNOSIDE; 4- HETSYN 3 PNA NITROPHENYL MANNOSIDE FORMUL 5 PNA 4(C12 H15 N O8) FORMUL 6 MN 4(MN 2+) FORMUL 7 CA 4(CA 2+) FORMUL 17 HOH *32(H2 O) HELIX 1 1 ASN A 14 GLY A 18 5 5 HELIX 2 2 ASP A 80 LEU A 85 1 6 HELIX 3 3 THR A 150 GLY A 152 5 3 HELIX 4 4 THR A 226 LEU A 230 5 5 HELIX 5 5 ASN B 14 GLY B 18 5 5 HELIX 6 6 ASP B 80 VAL B 84 5 5 HELIX 7 7 THR B 150 GLY B 152 5 3 HELIX 8 8 THR B 226 LEU B 230 5 5 HELIX 9 9 ASN C 14 GLY C 18 5 5 HELIX 10 10 ASP C 80 VAL C 84 5 5 HELIX 11 11 THR C 150 GLY C 152 5 3 HELIX 12 12 THR C 226 LEU C 230 5 5 HELIX 13 13 ASN D 14 GLY D 18 5 5 HELIX 14 14 ASP D 80 VAL D 84 5 5 HELIX 15 15 GLY D 149 ASN D 153 5 5 HELIX 16 16 THR D 226 LEU D 230 5 5 SHEET 1 S1A 7 LYS A 36 LYS A 39 0 SHEET 2 S1A 7 HIS A 24 ILE A 29 -1 SHEET 3 S1A 7 ILE A 4 ASP A 10 -1 SHEET 4 S1A 7 GLY A 209 ASN A 216 -1 SHEET 5 S1A 7 TRP A 88 SER A 96 -1 SHEET 6 S1A 7 VAL A 170 PHE A 175 -1 SHEET 7 S1A 7 LEU A 140 GLY A 144 -1 SHEET 1 S2A 6 ALA A 73 ASP A 78 0 SHEET 2 S2A 6 ARG A 60 SER A 66 -1 SHEET 3 S2A 6 VAL A 47 ASN A 55 -1 SHEET 4 S2A 6 ALA A 186 LYS A 200 -1 SHEET 5 S2A 6 THR A 103 SER A 117 -1 SHEET 6 S2A 6 THR A 123 PHE A 130 -1 SHEET 1 S1B 7 LYS B 36 LYS B 39 0 SHEET 2 S1B 7 HIS B 24 ILE B 29 -1 SHEET 3 S1B 7 ILE B 4 ASP B 10 -1 SHEET 4 S1B 7 GLY B 209 ASN B 216 -1 SHEET 5 S1B 7 TRP B 88 SER B 96 -1 SHEET 6 S1B 7 VAL B 170 PHE B 175 -1 SHEET 7 S1B 7 LEU B 140 GLY B 144 -1 SHEET 1 S2B 6 ALA B 73 ASP B 78 0 SHEET 2 S2B 6 ARG B 60 SER B 66 -1 SHEET 3 S2B 6 VAL B 47 ASN B 55 -1 SHEET 4 S2B 6 ALA B 186 LYS B 200 -1 SHEET 5 S2B 6 THR B 103 SER B 117 -1 SHEET 6 S2B 6 THR B 123 PHE B 130 -1 SHEET 1 S1C 7 LYS C 36 LYS C 39 0 SHEET 2 S1C 7 HIS C 24 ILE C 29 -1 SHEET 3 S1C 7 ILE C 4 ASP C 10 -1 SHEET 4 S1C 7 GLY C 209 ASN C 216 -1 SHEET 5 S1C 7 TRP C 88 SER C 96 -1 SHEET 6 S1C 7 VAL C 170 PHE C 175 -1 SHEET 7 S1C 7 LEU C 140 GLY C 144 -1 SHEET 1 S2C 6 ALA C 73 ASP C 78 0 SHEET 2 S2C 6 ARG C 60 SER C 66 -1 SHEET 3 S2C 6 VAL C 47 ASN C 55 -1 SHEET 4 S2C 6 ALA C 186 LYS C 200 -1 SHEET 5 S2C 6 THR C 103 SER C 117 -1 SHEET 6 S2C 6 THR C 123 PHE C 130 -1 SHEET 1 S1D 7 LYS D 36 LYS D 39 0 SHEET 2 S1D 7 HIS D 24 ILE D 29 -1 SHEET 3 S1D 7 ILE D 4 ASP D 10 -1 SHEET 4 S1D 7 GLY D 209 ASN D 216 -1 SHEET 5 S1D 7 TRP D 88 SER D 96 -1 SHEET 6 S1D 7 VAL D 170 PHE D 175 -1 SHEET 7 S1D 7 LEU D 140 GLY D 144 -1 SHEET 1 S2D 6 ALA D 73 ASP D 78 0 SHEET 2 S2D 6 ARG D 60 SER D 66 -1 SHEET 3 S2D 6 VAL D 47 ASN D 55 -1 SHEET 4 S2D 6 ALA D 186 LYS D 200 -1 SHEET 5 S2D 6 THR D 103 SER D 117 -1 SHEET 6 S2D 6 THR D 123 PHE D 130 -1 LINK OE2 GLU A 8 MN MN A 238 1555 1555 2.26 LINK OD2 ASP A 10 MN MN A 238 1555 1555 2.32 LINK OD1 ASP A 10 CA CA A 239 1555 1555 2.40 LINK OD2 ASP A 10 CA CA A 239 1555 1555 2.53 LINK O TYR A 12 CA CA A 239 1555 1555 2.17 LINK OD1 ASN A 14 CA CA A 239 1555 1555 2.35 LINK OD1 ASP A 19 MN MN A 238 1555 1555 2.38 LINK OD2 ASP A 19 CA CA A 239 1555 1555 2.26 LINK NE2 HIS A 24 MN MN A 238 1555 1555 2.24 LINK MN MN A 238 O HOH A 247 1555 1555 2.36 LINK MN MN A 238 O HOH A 248 1555 1555 2.25 LINK CA CA A 239 O HOH A 242 1555 1555 2.24 LINK CA CA A 239 O HOH A 249 1555 1555 2.42 LINK OE2 GLU B 8 MN MN B 238 1555 1555 2.27 LINK OD2 ASP B 10 MN MN B 238 1555 1555 2.13 LINK OD1 ASP B 10 CA CA B 239 1555 1555 2.51 LINK OD2 ASP B 10 CA CA B 239 1555 1555 2.45 LINK O TYR B 12 CA CA B 239 1555 1555 2.47 LINK OD1 ASN B 14 CA CA B 239 1555 1555 2.32 LINK OD1 ASP B 19 MN MN B 238 1555 1555 2.14 LINK OD2 ASP B 19 CA CA B 239 1555 1555 2.19 LINK NE2 HIS B 24 MN MN B 238 1555 1555 2.65 LINK MN MN B 238 O HOH B 245 1555 1555 2.22 LINK MN MN B 238 O HOH B 246 1555 1555 2.11 LINK CA CA B 239 O HOH B 247 1555 1555 2.08 LINK CA CA B 239 O HOH B 248 1555 1555 2.14 LINK OE2 GLU C 8 MN MN C 238 1555 1555 2.43 LINK OD2 ASP C 10 MN MN C 238 1555 1555 2.23 LINK OD1 ASP C 10 CA CA C 239 1555 1555 2.57 LINK OD2 ASP C 10 CA CA C 239 1555 1555 2.51 LINK O TYR C 12 CA CA C 239 1555 1555 2.15 LINK OD1 ASN C 14 CA CA C 239 1555 1555 2.48 LINK OD1 ASP C 19 MN MN C 238 1555 1555 2.59 LINK OD2 ASP C 19 CA CA C 239 1555 1555 2.73 LINK NE2 HIS C 24 MN MN C 238 1555 1555 2.23 LINK MN MN C 238 O HOH C 245 1555 1555 2.10 LINK MN MN C 238 O HOH C 246 1555 1555 2.05 LINK CA CA C 239 O HOH C 247 1555 1555 2.17 LINK CA CA C 239 O HOH C 248 1555 1555 2.49 LINK OE2 GLU D 8 MN MN D 238 1555 1555 2.33 LINK OD2 ASP D 10 MN MN D 238 1555 1555 2.12 LINK OD1 ASP D 10 CA CA D 239 1555 1555 2.27 LINK OD2 ASP D 10 CA CA D 239 1555 1555 2.48 LINK O TYR D 12 CA CA D 239 1555 1555 2.08 LINK OD1 ASN D 14 CA CA D 239 1555 1555 2.50 LINK OD1 ASP D 19 MN MN D 238 1555 1555 2.12 LINK OD2 ASP D 19 CA CA D 239 1555 1555 2.12 LINK NE2 HIS D 24 MN MN D 238 1555 1555 2.24 LINK MN MN D 238 O HOH D 243 1555 1555 2.36 LINK MN MN D 238 O HOH D 247 1555 1555 2.20 LINK CA CA D 239 O HOH D 245 1555 1555 2.48 LINK CA CA D 239 O HOH D 246 1555 1555 2.57 CISPEP 1 ALA A 207 ASP A 208 0 -4.00 CISPEP 2 ALA B 207 ASP B 208 0 13.11 CISPEP 3 ALA C 207 ASP C 208 0 0.26 CISPEP 4 ALA D 207 ASP D 208 0 11.13 CRYST1 135.190 155.380 71.250 90.00 90.00 90.00 P 21 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007397 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006436 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014035 0.00000