HEADER LIGASE 27-FEB-04 1VBN TITLE ESCHERICHIA COLI TYROSYL-TRNA SYNTHETASE MUTANT COMPLEXED WITH TYR-AMS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSYL-TRNA SYNTHETASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 5-322; COMPND 5 SYNONYM: TYROSINE--TRNA LIGASE, TYRRS; COMPND 6 EC: 6.1.1.1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PGEX-6P1 KEYWDS LIGASE, STRUCTURAL GENOMICS, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 2 INITIATIVE, RSGI EXPDTA X-RAY DIFFRACTION AUTHOR T.KOBAYASHI,K.SAKAMOTO,T.TAKIMURA,K.KAMATA,R.SEKINE,S.NISHIMURA, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 6 25-OCT-23 1VBN 1 REMARK REVDAT 5 10-NOV-21 1VBN 1 REMARK SEQADV REVDAT 4 28-SEP-16 1VBN 1 REMARK VERSN REVDAT 3 24-FEB-09 1VBN 1 VERSN REVDAT 2 15-MAR-05 1VBN 1 JRNL REVDAT 1 25-JAN-05 1VBN 0 JRNL AUTH T.KOBAYASHI,K.SAKAMOTO,T.TAKIMURA,R.SEKINE,K.VINCENT, JRNL AUTH 2 K.KAMATA,S.NISHIMURA,S.YOKOYAMA JRNL TITL STRUCTURAL BASIS OF NONNATURAL AMINO ACID RECOGNITION BY AN JRNL TITL 2 ENGINEERED AMINOACYL-TRNA SYNTHETASE FOR GENETIC CODE JRNL TITL 3 EXPANSION JRNL REF PROC.NATL.ACAD.SCI.USA V. 102 1366 2005 JRNL REFN ISSN 0027-8424 JRNL PMID 15671170 JRNL DOI 10.1073/PNAS.0407039102 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.73 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1849062.930 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 20115 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1982 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2906 REMARK 3 BIN R VALUE (WORKING SET) : 0.3210 REMARK 3 BIN FREE R VALUE : 0.3800 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 290 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.022 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5022 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 70 REMARK 3 SOLVENT ATOMS : 115 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.18000 REMARK 3 B22 (A**2) : 2.18000 REMARK 3 B33 (A**2) : -4.37000 REMARK 3 B12 (A**2) : 7.25000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.34 REMARK 3 ESD FROM SIGMAA (A) : 0.50 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.45 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.62 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.800 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 3.160 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 5.000 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 4.980 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 7.170 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.32 REMARK 3 BSOL : 37.73 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : TYRAMS.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : TYRAMS.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1VBN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-MAR-04. REMARK 100 THE DEPOSITION ID IS D_1000006436. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20149 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : 0.08000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.32400 REMARK 200 R SYM FOR SHELL (I) : 0.32400 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1UDF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULPHATE, PEG 400, SODIUM REMARK 280 CHLORIDE, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 122.32667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 61.16333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 61.16333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 122.32667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 21 76.92 -151.00 REMARK 500 PHE A 84 16.84 53.85 REMARK 500 GLU A 88 151.65 -43.80 REMARK 500 ASP A 115 113.97 -172.16 REMARK 500 CYS A 116 32.91 -177.02 REMARK 500 GLU A 118 -78.16 -14.92 REMARK 500 ASN A 119 42.74 -101.63 REMARK 500 ARG A 140 -72.94 -57.81 REMARK 500 ASN A 153 32.75 -92.47 REMARK 500 VAL A 157 -9.67 -140.24 REMARK 500 ARG A 163 114.46 175.89 REMARK 500 ASP A 232 40.25 -81.95 REMARK 500 THR A 234 -102.47 -90.89 REMARK 500 LYS A 235 -130.96 -128.50 REMARK 500 PHE A 236 136.12 164.32 REMARK 500 THR A 239 -126.56 -140.54 REMARK 500 VAL A 268 -38.56 -23.89 REMARK 500 ILE A 280 -30.27 -37.89 REMARK 500 ASP B 21 75.36 -162.24 REMARK 500 ASP B 115 31.39 178.56 REMARK 500 ASN B 119 34.76 -99.95 REMARK 500 LYS B 144 -9.55 -54.31 REMARK 500 ALA B 156 -19.01 -47.22 REMARK 500 GLN B 159 -80.18 -48.34 REMARK 500 ASN B 162 20.01 42.15 REMARK 500 TYR B 190 -1.78 -143.58 REMARK 500 TRP B 202 -78.36 -47.67 REMARK 500 THR B 234 153.72 -34.60 REMARK 500 THR B 239 -141.69 -146.05 REMARK 500 ALA B 243 141.60 -27.13 REMARK 500 VAL B 268 -38.96 -38.56 REMARK 500 GLU B 281 -70.15 -60.58 REMARK 500 ASN B 292 76.94 -108.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR B 269 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YSA A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YSA B 1002 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1UDF RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH 3-IODO-L-TYROSINE REMARK 900 RELATED ID: 1UDJ RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH L-TYROSINE REMARK 900 RELATED ID: 1VBM RELATED DB: PDB REMARK 900 THE WILD TYPE PROTEIN COMPLEXED WITH TYROSYLADENYLATE REMARK 900 RELATED ID: ECO001001308.1 RELATED DB: TARGETDB DBREF 1VBN A 5 322 UNP P00951 SYY_ECOLI 4 321 DBREF 1VBN B 5 322 UNP P00951 SYY_ECOLI 4 321 SEQADV 1VBN VAL A 37 UNP P00951 TYR 36 ENGINEERED MUTATION SEQADV 1VBN CYS A 195 UNP P00951 GLN 194 ENGINEERED MUTATION SEQADV 1VBN VAL B 37 UNP P00951 TYR 36 ENGINEERED MUTATION SEQADV 1VBN CYS B 195 UNP P00951 GLN 194 ENGINEERED MUTATION SEQRES 1 A 318 ASN LEU ILE LYS GLN LEU GLN GLU ARG GLY LEU VAL ALA SEQRES 2 A 318 GLN VAL THR ASP GLU GLU ALA LEU ALA GLU ARG LEU ALA SEQRES 3 A 318 GLN GLY PRO ILE ALA LEU VAL CYS GLY PHE ASP PRO THR SEQRES 4 A 318 ALA ASP SER LEU HIS LEU GLY HIS LEU VAL PRO LEU LEU SEQRES 5 A 318 CYS LEU LYS ARG PHE GLN GLN ALA GLY HIS LYS PRO VAL SEQRES 6 A 318 ALA LEU VAL GLY GLY ALA THR GLY LEU ILE GLY ASP PRO SEQRES 7 A 318 SER PHE LYS ALA ALA GLU ARG LYS LEU ASN THR GLU GLU SEQRES 8 A 318 THR VAL GLN GLU TRP VAL ASP LYS ILE ARG LYS GLN VAL SEQRES 9 A 318 ALA PRO PHE LEU ASP PHE ASP CYS GLY GLU ASN SER ALA SEQRES 10 A 318 ILE ALA ALA ASN ASN TYR ASP TRP PHE GLY ASN MET ASN SEQRES 11 A 318 VAL LEU THR PHE LEU ARG ASP ILE GLY LYS HIS PHE SER SEQRES 12 A 318 VAL ASN GLN MET ILE ASN LYS GLU ALA VAL LYS GLN ARG SEQRES 13 A 318 LEU ASN ARG GLU ASP GLN GLY ILE SER PHE THR GLU PHE SEQRES 14 A 318 SER TYR ASN LEU LEU GLN GLY TYR ASP PHE ALA CYS LEU SEQRES 15 A 318 ASN LYS GLN TYR GLY VAL VAL LEU CYS ILE GLY GLY SER SEQRES 16 A 318 ASP GLN TRP GLY ASN ILE THR SER GLY ILE ASP LEU THR SEQRES 17 A 318 ARG ARG LEU HIS GLN ASN GLN VAL PHE GLY LEU THR VAL SEQRES 18 A 318 PRO LEU ILE THR LYS ALA ASP GLY THR LYS PHE GLY LYS SEQRES 19 A 318 THR GLU GLY GLY ALA VAL TRP LEU ASP PRO LYS LYS THR SEQRES 20 A 318 SER PRO TYR LYS PHE TYR GLN PHE TRP ILE ASN THR ALA SEQRES 21 A 318 ASP ALA ASP VAL TYR ARG PHE LEU LYS PHE PHE THR PHE SEQRES 22 A 318 MET SER ILE GLU GLU ILE ASN ALA LEU GLU GLU GLU ASP SEQRES 23 A 318 LYS ASN SER GLY LYS ALA PRO ARG ALA GLN TYR VAL LEU SEQRES 24 A 318 ALA GLU GLN VAL THR ARG LEU VAL HIS GLY GLU GLU GLY SEQRES 25 A 318 LEU GLN ALA ALA LYS ARG SEQRES 1 B 318 ASN LEU ILE LYS GLN LEU GLN GLU ARG GLY LEU VAL ALA SEQRES 2 B 318 GLN VAL THR ASP GLU GLU ALA LEU ALA GLU ARG LEU ALA SEQRES 3 B 318 GLN GLY PRO ILE ALA LEU VAL CYS GLY PHE ASP PRO THR SEQRES 4 B 318 ALA ASP SER LEU HIS LEU GLY HIS LEU VAL PRO LEU LEU SEQRES 5 B 318 CYS LEU LYS ARG PHE GLN GLN ALA GLY HIS LYS PRO VAL SEQRES 6 B 318 ALA LEU VAL GLY GLY ALA THR GLY LEU ILE GLY ASP PRO SEQRES 7 B 318 SER PHE LYS ALA ALA GLU ARG LYS LEU ASN THR GLU GLU SEQRES 8 B 318 THR VAL GLN GLU TRP VAL ASP LYS ILE ARG LYS GLN VAL SEQRES 9 B 318 ALA PRO PHE LEU ASP PHE ASP CYS GLY GLU ASN SER ALA SEQRES 10 B 318 ILE ALA ALA ASN ASN TYR ASP TRP PHE GLY ASN MET ASN SEQRES 11 B 318 VAL LEU THR PHE LEU ARG ASP ILE GLY LYS HIS PHE SER SEQRES 12 B 318 VAL ASN GLN MET ILE ASN LYS GLU ALA VAL LYS GLN ARG SEQRES 13 B 318 LEU ASN ARG GLU ASP GLN GLY ILE SER PHE THR GLU PHE SEQRES 14 B 318 SER TYR ASN LEU LEU GLN GLY TYR ASP PHE ALA CYS LEU SEQRES 15 B 318 ASN LYS GLN TYR GLY VAL VAL LEU CYS ILE GLY GLY SER SEQRES 16 B 318 ASP GLN TRP GLY ASN ILE THR SER GLY ILE ASP LEU THR SEQRES 17 B 318 ARG ARG LEU HIS GLN ASN GLN VAL PHE GLY LEU THR VAL SEQRES 18 B 318 PRO LEU ILE THR LYS ALA ASP GLY THR LYS PHE GLY LYS SEQRES 19 B 318 THR GLU GLY GLY ALA VAL TRP LEU ASP PRO LYS LYS THR SEQRES 20 B 318 SER PRO TYR LYS PHE TYR GLN PHE TRP ILE ASN THR ALA SEQRES 21 B 318 ASP ALA ASP VAL TYR ARG PHE LEU LYS PHE PHE THR PHE SEQRES 22 B 318 MET SER ILE GLU GLU ILE ASN ALA LEU GLU GLU GLU ASP SEQRES 23 B 318 LYS ASN SER GLY LYS ALA PRO ARG ALA GLN TYR VAL LEU SEQRES 24 B 318 ALA GLU GLN VAL THR ARG LEU VAL HIS GLY GLU GLU GLY SEQRES 25 B 318 LEU GLN ALA ALA LYS ARG HET YSA A1001 35 HET YSA B1002 35 HETNAM YSA 5'-O-[N-(L-TYROSYL)SULFAMOYL]ADENOSINE HETSYN YSA TYROSYLADENYLATE FORMUL 3 YSA 2(C19 H23 N7 O8 S) FORMUL 5 HOH *115(H2 O) HELIX 1 1 ASN A 5 ARG A 13 1 9 HELIX 2 2 ASP A 21 GLY A 32 1 12 HELIX 3 3 HIS A 51 ALA A 64 1 14 HELIX 4 4 ALA A 75 ILE A 79 5 5 HELIX 5 5 THR A 93 ALA A 109 1 17 HELIX 6 6 PRO A 110 LEU A 112 5 3 HELIX 7 7 CYS A 116 SER A 120 5 5 HELIX 8 8 ASN A 126 GLY A 131 1 6 HELIX 9 9 ASN A 134 ILE A 142 1 9 HELIX 10 10 GLY A 143 PHE A 146 5 4 HELIX 11 11 SER A 147 ASN A 153 1 7 HELIX 12 12 LYS A 154 ASN A 162 1 9 HELIX 13 13 SER A 169 GLY A 191 1 23 HELIX 14 14 GLN A 201 GLN A 217 1 17 HELIX 15 15 SER A 252 ASN A 262 1 11 HELIX 16 16 ASP A 267 THR A 276 1 10 HELIX 17 17 SER A 279 ASN A 292 1 14 HELIX 18 18 ARG A 298 LYS A 321 1 24 HELIX 19 19 ASN B 5 ARG B 13 1 9 HELIX 20 20 ASP B 21 GLY B 32 1 12 HELIX 21 21 HIS B 48 ALA B 64 1 17 HELIX 22 22 ALA B 75 ILE B 79 5 5 HELIX 23 23 THR B 93 ALA B 109 1 17 HELIX 24 24 PRO B 110 LEU B 112 5 3 HELIX 25 25 ASN B 126 GLY B 131 1 6 HELIX 26 26 ASN B 134 ILE B 142 1 9 HELIX 27 27 GLY B 143 PHE B 146 5 4 HELIX 28 28 SER B 147 LYS B 154 1 8 HELIX 29 29 LYS B 154 GLN B 159 1 6 HELIX 30 30 THR B 171 PHE B 173 5 3 HELIX 31 31 SER B 174 GLY B 191 1 18 HELIX 32 32 GLN B 201 GLN B 217 1 17 HELIX 33 33 SER B 252 ASN B 262 1 11 HELIX 34 34 ALA B 264 THR B 276 1 13 HELIX 35 35 SER B 279 ASN B 292 1 14 HELIX 36 36 ARG B 298 ALA B 320 1 23 SHEET 1 A 6 GLN A 18 VAL A 19 0 SHEET 2 A 6 PHE A 221 VAL A 225 -1 O THR A 224 N GLN A 18 SHEET 3 A 6 VAL A 192 GLY A 198 1 N VAL A 193 O PHE A 221 SHEET 4 A 6 ALA A 35 PHE A 40 1 N VAL A 37 O ILE A 196 SHEET 5 A 6 LYS A 67 VAL A 72 1 O LEU A 71 N CYS A 38 SHEET 6 A 6 ILE A 122 ASN A 125 1 O ALA A 124 N VAL A 72 SHEET 1 B 6 GLN B 18 VAL B 19 0 SHEET 2 B 6 PHE B 221 VAL B 225 -1 O THR B 224 N GLN B 18 SHEET 3 B 6 VAL B 192 GLY B 198 1 N VAL B 193 O PHE B 221 SHEET 4 B 6 ALA B 35 PHE B 40 1 N VAL B 37 O LEU B 194 SHEET 5 B 6 LYS B 67 VAL B 72 1 O LEU B 71 N CYS B 38 SHEET 6 B 6 ILE B 122 ASN B 125 1 O ALA B 124 N ALA B 70 SITE 1 AC1 18 GLY A 39 ASP A 41 GLY A 50 HIS A 51 SITE 2 AC1 18 VAL A 53 PRO A 54 THR A 76 ASP A 81 SITE 3 AC1 18 TYR A 175 GLN A 179 ASP A 182 GLY A 198 SITE 4 AC1 18 ASP A 200 GLN A 201 PRO A 226 LEU A 227 SITE 5 AC1 18 ILE A 228 HOH A1010 SITE 1 AC2 18 GLY B 39 ASP B 41 GLY B 50 HIS B 51 SITE 2 AC2 18 VAL B 53 PRO B 54 LEU B 71 ASP B 81 SITE 3 AC2 18 TYR B 175 GLN B 179 ASP B 182 GLY B 197 SITE 4 AC2 18 GLY B 198 ASP B 200 GLN B 201 PRO B 226 SITE 5 AC2 18 LEU B 227 ILE B 228 CRYST1 83.627 83.627 183.490 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011958 0.006904 0.000000 0.00000 SCALE2 0.000000 0.013808 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005450 0.00000