HEADER    LIGASE                                  27-FEB-04   1VBN              
TITLE     ESCHERICHIA COLI TYROSYL-TRNA SYNTHETASE MUTANT COMPLEXED WITH TYR-AMS
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: TYROSYL-TRNA SYNTHETASE;                                   
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 FRAGMENT: RESIDUES 5-322;                                            
COMPND   5 SYNONYM: TYROSINE--TRNA LIGASE, TYRRS;                               
COMPND   6 EC: 6.1.1.1;                                                         
COMPND   7 ENGINEERED: YES;                                                     
COMPND   8 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;                               
SOURCE   3 ORGANISM_TAXID: 562;                                                 
SOURCE   4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);                       
SOURCE   5 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE   7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   8 EXPRESSION_SYSTEM_PLASMID: PGEX-6P1                                  
KEYWDS    LIGASE, STRUCTURAL GENOMICS, RIKEN STRUCTURAL GENOMICS/PROTEOMICS     
KEYWDS   2 INITIATIVE, RSGI                                                     
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    T.KOBAYASHI,K.SAKAMOTO,T.TAKIMURA,K.KAMATA,R.SEKINE,S.NISHIMURA,      
AUTHOR   2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)    
REVDAT   6   25-OCT-23 1VBN    1       REMARK                                   
REVDAT   5   10-NOV-21 1VBN    1       REMARK SEQADV                            
REVDAT   4   28-SEP-16 1VBN    1       REMARK VERSN                             
REVDAT   3   24-FEB-09 1VBN    1       VERSN                                    
REVDAT   2   15-MAR-05 1VBN    1       JRNL                                     
REVDAT   1   25-JAN-05 1VBN    0                                                
JRNL        AUTH   T.KOBAYASHI,K.SAKAMOTO,T.TAKIMURA,R.SEKINE,K.VINCENT,        
JRNL        AUTH 2 K.KAMATA,S.NISHIMURA,S.YOKOYAMA                              
JRNL        TITL   STRUCTURAL BASIS OF NONNATURAL AMINO ACID RECOGNITION BY AN  
JRNL        TITL 2 ENGINEERED AMINOACYL-TRNA SYNTHETASE FOR GENETIC CODE        
JRNL        TITL 3 EXPANSION                                                    
JRNL        REF    PROC.NATL.ACAD.SCI.USA        V. 102  1366 2005              
JRNL        REFN                   ISSN 0027-8424                               
JRNL        PMID   15671170                                                     
JRNL        DOI    10.1073/PNAS.0407039102                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.70 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS 1.0                                              
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN                            
REMARK   3                                                                      
REMARK   3  REFINEMENT TARGET : ENGH & HUBER                                    
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 46.73                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : 1849062.930                    
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : 0.0000                         
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 95.2                           
REMARK   3   NUMBER OF REFLECTIONS             : 20115                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE            (WORKING SET) : 0.217                           
REMARK   3   FREE R VALUE                     : 0.283                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 9.900                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1982                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : 0.006                           
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 6                            
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.70                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.87                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 92.90                        
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : 2906                         
REMARK   3   BIN R VALUE           (WORKING SET) : 0.3210                       
REMARK   3   BIN FREE R VALUE                    : 0.3800                       
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : 9.10                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : 290                          
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : 0.022                        
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 5022                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 70                                      
REMARK   3   SOLVENT ATOMS            : 115                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 12.60                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 42.00                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 2.18000                                              
REMARK   3    B22 (A**2) : 2.18000                                              
REMARK   3    B33 (A**2) : -4.37000                                             
REMARK   3    B12 (A**2) : 7.25000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : 0.34                            
REMARK   3   ESD FROM SIGMAA              (A) : 0.50                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : 5.00                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : 0.45                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : 0.62                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.007                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.300                           
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : 21.90                           
REMARK   3   IMPROPER ANGLES        (DEGREES) : 0.800                           
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : RESTRAINED                                
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : 3.160 ; 1.500                
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : 5.000 ; 2.000                
REMARK   3   SIDE-CHAIN BOND              (A**2) : 4.980 ; 2.000                
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : 7.170 ; 2.500                
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : FLAT MODEL                                           
REMARK   3   KSOL        : 0.32                                                 
REMARK   3   BSOL        : 37.73                                                
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : PROTEIN_REP.PARAM                              
REMARK   3  PARAMETER FILE  2  : WATER_REP.PARAM                                
REMARK   3  PARAMETER FILE  3  : TYRAMS.PARAM                                   
REMARK   3  PARAMETER FILE  4  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : PROTEIN.TOP                                    
REMARK   3  TOPOLOGY FILE  2   : WATER.TOP                                      
REMARK   3  TOPOLOGY FILE  3   : TYRAMS.TOP                                     
REMARK   3  TOPOLOGY FILE  4   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1VBN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-MAR-04.                  
REMARK 100 THE DEPOSITION ID IS D_1000006436.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 19-OCT-03                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 7.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : SPRING-8                           
REMARK 200  BEAMLINE                       : BL41XU                             
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.00                               
REMARK 200  MONOCHROMATOR                  : SI 111 CHANNEL                     
REMARK 200  OPTICS                         : MIRRORS                            
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : MARRESEARCH                        
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO                              
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 20149                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.700                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 95.3                               
REMARK 200  DATA REDUNDANCY                : 6.500                              
REMARK 200  R MERGE                    (I) : 0.08000                            
REMARK 200  R SYM                      (I) : 0.08000                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 15.7000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.75                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 93.4                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 5.60                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.32400                            
REMARK 200  R SYM FOR SHELL            (I) : 0.32400                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.900                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: MOLREP                                                
REMARK 200 STARTING MODEL: PDB ENTRY 1UDF                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 51.21                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULPHATE, PEG 400, SODIUM       
REMARK 280  CHLORIDE, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K   
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+2/3                                            
REMARK 290       3555   -X+Y,-X,Z+1/3                                           
REMARK 290       4555   Y,X,-Z                                                  
REMARK 290       5555   X-Y,-Y,-Z+1/3                                           
REMARK 290       6555   -X,-X+Y,-Z+2/3                                          
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000      122.32667            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       61.16333            
REMARK 290   SMTRY1   4 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   5  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   5  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000 -1.000000       61.16333            
REMARK 290   SMTRY1   6 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000 -1.000000      122.32667            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 5090 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 27380 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASP A  21       76.92   -151.00                                   
REMARK 500    PHE A  84       16.84     53.85                                   
REMARK 500    GLU A  88      151.65    -43.80                                   
REMARK 500    ASP A 115      113.97   -172.16                                   
REMARK 500    CYS A 116       32.91   -177.02                                   
REMARK 500    GLU A 118      -78.16    -14.92                                   
REMARK 500    ASN A 119       42.74   -101.63                                   
REMARK 500    ARG A 140      -72.94    -57.81                                   
REMARK 500    ASN A 153       32.75    -92.47                                   
REMARK 500    VAL A 157       -9.67   -140.24                                   
REMARK 500    ARG A 163      114.46    175.89                                   
REMARK 500    ASP A 232       40.25    -81.95                                   
REMARK 500    THR A 234     -102.47    -90.89                                   
REMARK 500    LYS A 235     -130.96   -128.50                                   
REMARK 500    PHE A 236      136.12    164.32                                   
REMARK 500    THR A 239     -126.56   -140.54                                   
REMARK 500    VAL A 268      -38.56    -23.89                                   
REMARK 500    ILE A 280      -30.27    -37.89                                   
REMARK 500    ASP B  21       75.36   -162.24                                   
REMARK 500    ASP B 115       31.39    178.56                                   
REMARK 500    ASN B 119       34.76    -99.95                                   
REMARK 500    LYS B 144       -9.55    -54.31                                   
REMARK 500    ALA B 156      -19.01    -47.22                                   
REMARK 500    GLN B 159      -80.18    -48.34                                   
REMARK 500    ASN B 162       20.01     42.15                                   
REMARK 500    TYR B 190       -1.78   -143.58                                   
REMARK 500    TRP B 202      -78.36    -47.67                                   
REMARK 500    THR B 234      153.72    -34.60                                   
REMARK 500    THR B 239     -141.69   -146.05                                   
REMARK 500    ALA B 243      141.60    -27.13                                   
REMARK 500    VAL B 268      -38.96    -38.56                                   
REMARK 500    GLU B 281      -70.15    -60.58                                   
REMARK 500    ASN B 292       76.94   -108.28                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500    TYR B 269         0.07    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YSA A 1001                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YSA B 1002                
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1UDF   RELATED DB: PDB                                   
REMARK 900 THE SAME PROTEIN COMPLEXED WITH 3-IODO-L-TYROSINE                    
REMARK 900 RELATED ID: 1UDJ   RELATED DB: PDB                                   
REMARK 900 THE SAME PROTEIN COMPLEXED WITH L-TYROSINE                           
REMARK 900 RELATED ID: 1VBM   RELATED DB: PDB                                   
REMARK 900 THE WILD TYPE PROTEIN COMPLEXED WITH TYROSYLADENYLATE                
REMARK 900 RELATED ID: ECO001001308.1   RELATED DB: TARGETDB                    
DBREF  1VBN A    5   322  UNP    P00951   SYY_ECOLI        4    321             
DBREF  1VBN B    5   322  UNP    P00951   SYY_ECOLI        4    321             
SEQADV 1VBN VAL A   37  UNP  P00951    TYR    36 ENGINEERED MUTATION            
SEQADV 1VBN CYS A  195  UNP  P00951    GLN   194 ENGINEERED MUTATION            
SEQADV 1VBN VAL B   37  UNP  P00951    TYR    36 ENGINEERED MUTATION            
SEQADV 1VBN CYS B  195  UNP  P00951    GLN   194 ENGINEERED MUTATION            
SEQRES   1 A  318  ASN LEU ILE LYS GLN LEU GLN GLU ARG GLY LEU VAL ALA          
SEQRES   2 A  318  GLN VAL THR ASP GLU GLU ALA LEU ALA GLU ARG LEU ALA          
SEQRES   3 A  318  GLN GLY PRO ILE ALA LEU VAL CYS GLY PHE ASP PRO THR          
SEQRES   4 A  318  ALA ASP SER LEU HIS LEU GLY HIS LEU VAL PRO LEU LEU          
SEQRES   5 A  318  CYS LEU LYS ARG PHE GLN GLN ALA GLY HIS LYS PRO VAL          
SEQRES   6 A  318  ALA LEU VAL GLY GLY ALA THR GLY LEU ILE GLY ASP PRO          
SEQRES   7 A  318  SER PHE LYS ALA ALA GLU ARG LYS LEU ASN THR GLU GLU          
SEQRES   8 A  318  THR VAL GLN GLU TRP VAL ASP LYS ILE ARG LYS GLN VAL          
SEQRES   9 A  318  ALA PRO PHE LEU ASP PHE ASP CYS GLY GLU ASN SER ALA          
SEQRES  10 A  318  ILE ALA ALA ASN ASN TYR ASP TRP PHE GLY ASN MET ASN          
SEQRES  11 A  318  VAL LEU THR PHE LEU ARG ASP ILE GLY LYS HIS PHE SER          
SEQRES  12 A  318  VAL ASN GLN MET ILE ASN LYS GLU ALA VAL LYS GLN ARG          
SEQRES  13 A  318  LEU ASN ARG GLU ASP GLN GLY ILE SER PHE THR GLU PHE          
SEQRES  14 A  318  SER TYR ASN LEU LEU GLN GLY TYR ASP PHE ALA CYS LEU          
SEQRES  15 A  318  ASN LYS GLN TYR GLY VAL VAL LEU CYS ILE GLY GLY SER          
SEQRES  16 A  318  ASP GLN TRP GLY ASN ILE THR SER GLY ILE ASP LEU THR          
SEQRES  17 A  318  ARG ARG LEU HIS GLN ASN GLN VAL PHE GLY LEU THR VAL          
SEQRES  18 A  318  PRO LEU ILE THR LYS ALA ASP GLY THR LYS PHE GLY LYS          
SEQRES  19 A  318  THR GLU GLY GLY ALA VAL TRP LEU ASP PRO LYS LYS THR          
SEQRES  20 A  318  SER PRO TYR LYS PHE TYR GLN PHE TRP ILE ASN THR ALA          
SEQRES  21 A  318  ASP ALA ASP VAL TYR ARG PHE LEU LYS PHE PHE THR PHE          
SEQRES  22 A  318  MET SER ILE GLU GLU ILE ASN ALA LEU GLU GLU GLU ASP          
SEQRES  23 A  318  LYS ASN SER GLY LYS ALA PRO ARG ALA GLN TYR VAL LEU          
SEQRES  24 A  318  ALA GLU GLN VAL THR ARG LEU VAL HIS GLY GLU GLU GLY          
SEQRES  25 A  318  LEU GLN ALA ALA LYS ARG                                      
SEQRES   1 B  318  ASN LEU ILE LYS GLN LEU GLN GLU ARG GLY LEU VAL ALA          
SEQRES   2 B  318  GLN VAL THR ASP GLU GLU ALA LEU ALA GLU ARG LEU ALA          
SEQRES   3 B  318  GLN GLY PRO ILE ALA LEU VAL CYS GLY PHE ASP PRO THR          
SEQRES   4 B  318  ALA ASP SER LEU HIS LEU GLY HIS LEU VAL PRO LEU LEU          
SEQRES   5 B  318  CYS LEU LYS ARG PHE GLN GLN ALA GLY HIS LYS PRO VAL          
SEQRES   6 B  318  ALA LEU VAL GLY GLY ALA THR GLY LEU ILE GLY ASP PRO          
SEQRES   7 B  318  SER PHE LYS ALA ALA GLU ARG LYS LEU ASN THR GLU GLU          
SEQRES   8 B  318  THR VAL GLN GLU TRP VAL ASP LYS ILE ARG LYS GLN VAL          
SEQRES   9 B  318  ALA PRO PHE LEU ASP PHE ASP CYS GLY GLU ASN SER ALA          
SEQRES  10 B  318  ILE ALA ALA ASN ASN TYR ASP TRP PHE GLY ASN MET ASN          
SEQRES  11 B  318  VAL LEU THR PHE LEU ARG ASP ILE GLY LYS HIS PHE SER          
SEQRES  12 B  318  VAL ASN GLN MET ILE ASN LYS GLU ALA VAL LYS GLN ARG          
SEQRES  13 B  318  LEU ASN ARG GLU ASP GLN GLY ILE SER PHE THR GLU PHE          
SEQRES  14 B  318  SER TYR ASN LEU LEU GLN GLY TYR ASP PHE ALA CYS LEU          
SEQRES  15 B  318  ASN LYS GLN TYR GLY VAL VAL LEU CYS ILE GLY GLY SER          
SEQRES  16 B  318  ASP GLN TRP GLY ASN ILE THR SER GLY ILE ASP LEU THR          
SEQRES  17 B  318  ARG ARG LEU HIS GLN ASN GLN VAL PHE GLY LEU THR VAL          
SEQRES  18 B  318  PRO LEU ILE THR LYS ALA ASP GLY THR LYS PHE GLY LYS          
SEQRES  19 B  318  THR GLU GLY GLY ALA VAL TRP LEU ASP PRO LYS LYS THR          
SEQRES  20 B  318  SER PRO TYR LYS PHE TYR GLN PHE TRP ILE ASN THR ALA          
SEQRES  21 B  318  ASP ALA ASP VAL TYR ARG PHE LEU LYS PHE PHE THR PHE          
SEQRES  22 B  318  MET SER ILE GLU GLU ILE ASN ALA LEU GLU GLU GLU ASP          
SEQRES  23 B  318  LYS ASN SER GLY LYS ALA PRO ARG ALA GLN TYR VAL LEU          
SEQRES  24 B  318  ALA GLU GLN VAL THR ARG LEU VAL HIS GLY GLU GLU GLY          
SEQRES  25 B  318  LEU GLN ALA ALA LYS ARG                                      
HET    YSA  A1001      35                                                       
HET    YSA  B1002      35                                                       
HETNAM     YSA 5'-O-[N-(L-TYROSYL)SULFAMOYL]ADENOSINE                           
HETSYN     YSA TYROSYLADENYLATE                                                 
FORMUL   3  YSA    2(C19 H23 N7 O8 S)                                           
FORMUL   5  HOH   *115(H2 O)                                                    
HELIX    1   1 ASN A    5  ARG A   13  1                                   9    
HELIX    2   2 ASP A   21  GLY A   32  1                                  12    
HELIX    3   3 HIS A   51  ALA A   64  1                                  14    
HELIX    4   4 ALA A   75  ILE A   79  5                                   5    
HELIX    5   5 THR A   93  ALA A  109  1                                  17    
HELIX    6   6 PRO A  110  LEU A  112  5                                   3    
HELIX    7   7 CYS A  116  SER A  120  5                                   5    
HELIX    8   8 ASN A  126  GLY A  131  1                                   6    
HELIX    9   9 ASN A  134  ILE A  142  1                                   9    
HELIX   10  10 GLY A  143  PHE A  146  5                                   4    
HELIX   11  11 SER A  147  ASN A  153  1                                   7    
HELIX   12  12 LYS A  154  ASN A  162  1                                   9    
HELIX   13  13 SER A  169  GLY A  191  1                                  23    
HELIX   14  14 GLN A  201  GLN A  217  1                                  17    
HELIX   15  15 SER A  252  ASN A  262  1                                  11    
HELIX   16  16 ASP A  267  THR A  276  1                                  10    
HELIX   17  17 SER A  279  ASN A  292  1                                  14    
HELIX   18  18 ARG A  298  LYS A  321  1                                  24    
HELIX   19  19 ASN B    5  ARG B   13  1                                   9    
HELIX   20  20 ASP B   21  GLY B   32  1                                  12    
HELIX   21  21 HIS B   48  ALA B   64  1                                  17    
HELIX   22  22 ALA B   75  ILE B   79  5                                   5    
HELIX   23  23 THR B   93  ALA B  109  1                                  17    
HELIX   24  24 PRO B  110  LEU B  112  5                                   3    
HELIX   25  25 ASN B  126  GLY B  131  1                                   6    
HELIX   26  26 ASN B  134  ILE B  142  1                                   9    
HELIX   27  27 GLY B  143  PHE B  146  5                                   4    
HELIX   28  28 SER B  147  LYS B  154  1                                   8    
HELIX   29  29 LYS B  154  GLN B  159  1                                   6    
HELIX   30  30 THR B  171  PHE B  173  5                                   3    
HELIX   31  31 SER B  174  GLY B  191  1                                  18    
HELIX   32  32 GLN B  201  GLN B  217  1                                  17    
HELIX   33  33 SER B  252  ASN B  262  1                                  11    
HELIX   34  34 ALA B  264  THR B  276  1                                  13    
HELIX   35  35 SER B  279  ASN B  292  1                                  14    
HELIX   36  36 ARG B  298  ALA B  320  1                                  23    
SHEET    1   A 6 GLN A  18  VAL A  19  0                                        
SHEET    2   A 6 PHE A 221  VAL A 225 -1  O  THR A 224   N  GLN A  18           
SHEET    3   A 6 VAL A 192  GLY A 198  1  N  VAL A 193   O  PHE A 221           
SHEET    4   A 6 ALA A  35  PHE A  40  1  N  VAL A  37   O  ILE A 196           
SHEET    5   A 6 LYS A  67  VAL A  72  1  O  LEU A  71   N  CYS A  38           
SHEET    6   A 6 ILE A 122  ASN A 125  1  O  ALA A 124   N  VAL A  72           
SHEET    1   B 6 GLN B  18  VAL B  19  0                                        
SHEET    2   B 6 PHE B 221  VAL B 225 -1  O  THR B 224   N  GLN B  18           
SHEET    3   B 6 VAL B 192  GLY B 198  1  N  VAL B 193   O  PHE B 221           
SHEET    4   B 6 ALA B  35  PHE B  40  1  N  VAL B  37   O  LEU B 194           
SHEET    5   B 6 LYS B  67  VAL B  72  1  O  LEU B  71   N  CYS B  38           
SHEET    6   B 6 ILE B 122  ASN B 125  1  O  ALA B 124   N  ALA B  70           
SITE     1 AC1 18 GLY A  39  ASP A  41  GLY A  50  HIS A  51                    
SITE     2 AC1 18 VAL A  53  PRO A  54  THR A  76  ASP A  81                    
SITE     3 AC1 18 TYR A 175  GLN A 179  ASP A 182  GLY A 198                    
SITE     4 AC1 18 ASP A 200  GLN A 201  PRO A 226  LEU A 227                    
SITE     5 AC1 18 ILE A 228  HOH A1010                                          
SITE     1 AC2 18 GLY B  39  ASP B  41  GLY B  50  HIS B  51                    
SITE     2 AC2 18 VAL B  53  PRO B  54  LEU B  71  ASP B  81                    
SITE     3 AC2 18 TYR B 175  GLN B 179  ASP B 182  GLY B 197                    
SITE     4 AC2 18 GLY B 198  ASP B 200  GLN B 201  PRO B 226                    
SITE     5 AC2 18 LEU B 227  ILE B 228                                          
CRYST1   83.627   83.627  183.490  90.00  90.00 120.00 P 32 2 1     12          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.011958  0.006904  0.000000        0.00000                         
SCALE2      0.000000  0.013808  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.005450        0.00000