data_1VCQ # _entry.id 1VCQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1VCQ WWPDB D_1000177019 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1VCQ _pdbx_database_status.recvd_initial_deposition_date 1996-03-04 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lu, G.' 1 'Choi, H.-K.' 2 'Rossmann, M.G.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structure of Semliki Forest virus core protein.' Proteins 27 345 359 1997 PSFGEY US 0887-3585 0867 ? 9094737 '10.1002/(SICI)1097-0134(199703)27:3<345::AID-PROT3>3.0.CO;2-C' 1 'Refined Structure of Sindbis Virus Core Protein and Comparison with Other Chymotrypsin-Like Serine Proteinase Structures' J.Mol.Biol. 230 228 ? 1993 JMOBAK UK 0022-2836 0070 ? ? ? 2 'Structure of Sindbis Virus Core Protein Reveals a Chymotrypsin-Like Serine Proteinase and the Organization of the Virion' Nature 354 37 ? 1991 NATUAS UK 0028-0836 0006 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Choi, H.K.' 1 primary 'Lu, G.' 2 primary 'Lee, S.' 3 primary 'Wengler, G.' 4 primary 'Rossmann, M.G.' 5 1 'Tong, L.' 6 1 'Wengler, G.' 7 1 'Rossmann, M.G.' 8 2 'Choi, H.K.' 9 2 'Tong, L.' 10 2 'Minor, W.' 11 2 'Dumas, P.' 12 2 'Boege, U.' 13 2 'Rossmann, M.G.' 14 2 'Wengler, G.' 15 # _cell.entry_id 1VCQ _cell.length_a 53.717 _cell.length_b 48.572 _cell.length_c 70.372 _cell.angle_alpha 90.00 _cell.angle_beta 105.77 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VCQ _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'SEMLIKI FOREST VIRUS CAPSID PROTEIN' _entity.formula_weight 16252.439 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details 'CRYSTAL FORM II' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;CIFEVKHEGKVTGYACLVGDKVMKPAHVKGVIDNADLAKLAFKKSSKYDLECAQIPVHMRSDASKYTHEKPEGHYNWHHG AVQYSGGRFTIPTGAGKPGDSGRPIFDNKGRVVAIVLGGANEGSRTALSVVTWNKDMVTRVTPEGSEEW ; _entity_poly.pdbx_seq_one_letter_code_can ;CIFEVKHEGKVTGYACLVGDKVMKPAHVKGVIDNADLAKLAFKKSSKYDLECAQIPVHMRSDASKYTHEKPEGHYNWHHG AVQYSGGRFTIPTGAGKPGDSGRPIFDNKGRVVAIVLGGANEGSRTALSVVTWNKDMVTRVTPEGSEEW ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CYS n 1 2 ILE n 1 3 PHE n 1 4 GLU n 1 5 VAL n 1 6 LYS n 1 7 HIS n 1 8 GLU n 1 9 GLY n 1 10 LYS n 1 11 VAL n 1 12 THR n 1 13 GLY n 1 14 TYR n 1 15 ALA n 1 16 CYS n 1 17 LEU n 1 18 VAL n 1 19 GLY n 1 20 ASP n 1 21 LYS n 1 22 VAL n 1 23 MET n 1 24 LYS n 1 25 PRO n 1 26 ALA n 1 27 HIS n 1 28 VAL n 1 29 LYS n 1 30 GLY n 1 31 VAL n 1 32 ILE n 1 33 ASP n 1 34 ASN n 1 35 ALA n 1 36 ASP n 1 37 LEU n 1 38 ALA n 1 39 LYS n 1 40 LEU n 1 41 ALA n 1 42 PHE n 1 43 LYS n 1 44 LYS n 1 45 SER n 1 46 SER n 1 47 LYS n 1 48 TYR n 1 49 ASP n 1 50 LEU n 1 51 GLU n 1 52 CYS n 1 53 ALA n 1 54 GLN n 1 55 ILE n 1 56 PRO n 1 57 VAL n 1 58 HIS n 1 59 MET n 1 60 ARG n 1 61 SER n 1 62 ASP n 1 63 ALA n 1 64 SER n 1 65 LYS n 1 66 TYR n 1 67 THR n 1 68 HIS n 1 69 GLU n 1 70 LYS n 1 71 PRO n 1 72 GLU n 1 73 GLY n 1 74 HIS n 1 75 TYR n 1 76 ASN n 1 77 TRP n 1 78 HIS n 1 79 HIS n 1 80 GLY n 1 81 ALA n 1 82 VAL n 1 83 GLN n 1 84 TYR n 1 85 SER n 1 86 GLY n 1 87 GLY n 1 88 ARG n 1 89 PHE n 1 90 THR n 1 91 ILE n 1 92 PRO n 1 93 THR n 1 94 GLY n 1 95 ALA n 1 96 GLY n 1 97 LYS n 1 98 PRO n 1 99 GLY n 1 100 ASP n 1 101 SER n 1 102 GLY n 1 103 ARG n 1 104 PRO n 1 105 ILE n 1 106 PHE n 1 107 ASP n 1 108 ASN n 1 109 LYS n 1 110 GLY n 1 111 ARG n 1 112 VAL n 1 113 VAL n 1 114 ALA n 1 115 ILE n 1 116 VAL n 1 117 LEU n 1 118 GLY n 1 119 GLY n 1 120 ALA n 1 121 ASN n 1 122 GLU n 1 123 GLY n 1 124 SER n 1 125 ARG n 1 126 THR n 1 127 ALA n 1 128 LEU n 1 129 SER n 1 130 VAL n 1 131 VAL n 1 132 THR n 1 133 TRP n 1 134 ASN n 1 135 LYS n 1 136 ASP n 1 137 MET n 1 138 VAL n 1 139 THR n 1 140 ARG n 1 141 VAL n 1 142 THR n 1 143 PRO n 1 144 GLU n 1 145 GLY n 1 146 SER n 1 147 GLU n 1 148 GLU n 1 149 TRP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Alphavirus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Semliki forest virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11033 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ KIDNEY _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Cricetinae gen. sp.' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 36483 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POLS_SFV _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P03315 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MNYIPTQTFYGRRWRPRPAARPWPLQATPVAPVVPDFQAQQMQQLISAVNALTMRQNAIAPARPPKPKKKKTTKPKPKTQ PKKINGKTQQQKKKDKQADKKKKKPGKRERMCMKIENDCIFEVKHEGKVTGYACLVGDKVMKPAHVKGVIDNADLAKLAF KKSSKYDLECAQIPVHMRSDASKYTHEKPEGHYNWHHGAVQYSGGRFTIPTGAGKPGDSGRPIFDNKGRVVAIVLGGANE GSRTALSVVTWNKDMVTRVTPEGSEEWSAPLITAMCVLANATFPCFQPPCVPCCYENNAEATLRMLEDNVDRPGYYDLLQ AALTCRNGTRHRRSVSQHFNVYKATRPYIAYCADCGAGHSCHSPVAIEAVRSEATDGMLKIQFSAQIGIDKSDNHDYTKI RYADGHAIENAVRSSLKVATSGDCFVHGTMGHFILAKCPPGEFLQVSIQDTRNAVRACRIQYHHDPQPVGREKFTIRPHY GKEIPCTTYQQTTAETVEEIDMHMPPDTPDRTLLSQQSGNVKITVGGKKVKYNCTCGTGNVGTTNSDMTINTCLIEQCHV SVTDHKKWQFNSPFVPRADEPARKGKVHIPFPLDNITCRVPMAREPTVIHGKREVTLHLHPDHPTLFSYRTLGEDPQYHE EWVTAAVERTIPVPVDGMEYHWGNNDPVRLWSQLTTEGKPHGWPHQIVQYYYGLYPAATVSAVVGMSLLALISIFASCYM LVAARSKCLTPYALTPGAAVPWTLGILCCAPRAHAASVAETMAYLWDQNQALFWLEFAAPVACILIITYCLRNVLCCCKS LSFLVLLSLGATARAYEHSTVMPNVVGFPYKAHIERPGYSPLTLQMQVVETSLEPTLNLEYITCEYKTVVPSPYVKCCGA SECSTKEKPDYQCKVYTGVYPFMWGGAYCFCDSENTQLSEAYVDRSDVCRHDHASAYKAHTASLKAKVRVMYGNVNQTVD VYVNGDHAVTIGGTQFIFGPLSSAWTPFDNKIVVYKDEVFNQDFPPYGSGQPGRFGDIQSRTVESNDLYANTALKLARPS PGMVHVPYTQTPSGFKYWLKEKGTALNTKAPFGCQIKTNPVRAMNCAVGNIPVSMNLPDSAFTRIVEAPTIIDLTCTVAT CTHSSDFGGVLTLTYKTNKNGDCSVHSHSNVATLQEATAKVKTAGKVTLHFSTASASPSFVVSLCSARATCSASCEPPKD HIVPYAASHSNVVFPDMSGTALSWVQKISGGLGAFAIGAILVLVVVTCIGLRR ; _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1VCQ A 1 ? 149 ? P03315 119 ? 267 ? 119 267 2 1 1VCQ B 1 ? 149 ? P03315 119 ? 267 ? 119 267 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1VCQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.72 _exptl_crystal.density_percent_sol 54.73 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type SIEMENS _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1VCQ _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high ? _reflns.number_obs 5222 _reflns.number_all ? _reflns.percent_possible_obs 80.3 _reflns.pdbx_Rmerge_I_obs 0.093 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1VCQ _refine.ls_number_reflns_obs 4501 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.5 _refine.ls_d_res_high 3.1 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.157 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.157 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 18.6 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2284 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2287 _refine_hist.d_res_high 3.1 _refine_hist.d_res_low 6.5 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.013 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.7 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.5 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 1.3 ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 1.7 ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 1.5 ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 2.1 ? ? ? 'X-RAY DIFFRACTION' ? # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] -0.983860 _struct_ncs_oper.matrix[1][2] -0.178791 _struct_ncs_oper.matrix[1][3] -0.007245 _struct_ncs_oper.matrix[2][1] -0.178308 _struct_ncs_oper.matrix[2][2] 0.982987 _struct_ncs_oper.matrix[2][3] -0.044068 _struct_ncs_oper.matrix[3][1] 0.015000 _struct_ncs_oper.matrix[3][2] -0.042065 _struct_ncs_oper.matrix[3][3] -0.999002 _struct_ncs_oper.vector[1] 16.27600 _struct_ncs_oper.vector[2] 2.14200 _struct_ncs_oper.vector[3] 33.40400 # _struct.entry_id 1VCQ _struct.title 'SEMLIKI FOREST VIRUS CAPSID PROTEIN (CRYSTAL FORM II)' _struct.pdbx_descriptor 'SEMLIKI FOREST VIRUS CAPSID PROTEIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1VCQ _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'VIRUS COAT PROTEIN, POLYPROTEIN, TRANSMEMBRANE, GLYCOPROTEIN, NUCLEOCAPSID PROTEIN, Viral protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 A1 ALA A 35 ? ALA A 38 ? ALA A 153 ALA A 156 1 ? 4 HELX_P HELX_P2 A2 VAL A 57 ? ASP A 62 ? VAL A 175 ASP A 180 5 ? 6 HELX_P HELX_P3 B1 ALA B 35 ? ALA B 38 ? ALA B 153 ALA B 156 1 ? 4 HELX_P HELX_P4 B2 VAL B 57 ? ASP B 62 ? VAL B 175 ASP B 180 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 1 SG ? ? ? 1_555 A CYS 16 SG ? ? A CYS 119 A CYS 134 1_555 ? ? ? ? ? ? ? 1.991 ? disulf2 disulf ? ? B CYS 1 SG ? ? ? 1_555 B CYS 16 SG ? ? B CYS 119 B CYS 134 1_555 ? ? ? ? ? ? ? 2.015 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A1 ? 6 ? A2 ? 7 ? A3 ? 2 ? B1 ? 6 ? B2 ? 7 ? B3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A1 1 2 ? anti-parallel A1 2 3 ? anti-parallel A1 3 4 ? anti-parallel A1 4 5 ? anti-parallel A1 5 6 ? anti-parallel A2 1 2 ? anti-parallel A2 2 3 ? anti-parallel A2 3 4 ? anti-parallel A2 4 5 ? anti-parallel A2 5 6 ? anti-parallel A2 6 7 ? anti-parallel A3 1 2 ? anti-parallel B1 1 2 ? anti-parallel B1 2 3 ? anti-parallel B1 3 4 ? anti-parallel B1 4 5 ? anti-parallel B1 5 6 ? anti-parallel B2 1 2 ? anti-parallel B2 2 3 ? anti-parallel B2 3 4 ? anti-parallel B2 4 5 ? anti-parallel B2 5 6 ? anti-parallel B2 6 7 ? anti-parallel B3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A1 1 VAL A 31 ? ILE A 32 ? VAL A 149 ILE A 150 A1 2 CYS A 1 ? HIS A 7 ? CYS A 119 HIS A 125 A1 3 LYS A 10 ? VAL A 18 ? LYS A 128 VAL A 136 A1 4 LYS A 21 ? PRO A 25 ? LYS A 139 PRO A 143 A1 5 LEU A 50 ? GLN A 54 ? LEU A 168 GLN A 172 A1 6 PHE A 42 ? SER A 45 ? PHE A 160 SER A 163 A2 1 GLY A 73 ? TRP A 77 ? GLY A 191 TRP A 195 A2 2 GLY A 80 ? TYR A 84 ? GLY A 198 TYR A 202 A2 3 PHE A 89 ? PRO A 92 ? PHE A 207 PRO A 210 A2 4 ARG A 125 ? ASN A 134 ? ARG A 243 ASN A 252 A2 5 VAL A 112 ? ASN A 121 ? VAL A 230 ASN A 239 A2 6 PRO A 104 ? PHE A 106 ? PRO A 222 PHE A 224 A2 7 GLY A 73 ? TRP A 77 ? GLY A 191 TRP A 195 A3 1 ARG A 125 ? ASN A 134 ? ARG A 243 ASN A 252 A3 2 MET A 137 ? VAL A 141 ? MET A 255 VAL A 259 B1 1 VAL B 31 ? ILE B 32 ? VAL B 149 ILE B 150 B1 2 CYS B 1 ? HIS B 7 ? CYS B 119 HIS B 125 B1 3 LYS B 10 ? VAL B 18 ? LYS B 128 VAL B 136 B1 4 LYS B 21 ? PRO B 25 ? LYS B 139 PRO B 143 B1 5 LEU B 50 ? GLN B 54 ? LEU B 168 GLN B 172 B1 6 PHE B 42 ? SER B 45 ? PHE B 160 SER B 163 B2 1 GLY B 73 ? TRP B 77 ? GLY B 191 TRP B 195 B2 2 GLY B 80 ? TYR B 84 ? GLY B 198 TYR B 202 B2 3 PHE B 89 ? PRO B 92 ? PHE B 207 PRO B 210 B2 4 ARG B 125 ? ASN B 134 ? ARG B 243 ASN B 252 B2 5 VAL B 112 ? ASN B 121 ? VAL B 230 ASN B 239 B2 6 PRO B 104 ? PHE B 106 ? PRO B 222 PHE B 224 B2 7 GLY B 73 ? TRP B 77 ? GLY B 191 TRP B 195 B3 1 ARG B 125 ? ASN B 134 ? ARG B 243 ASN B 252 B3 2 MET B 137 ? VAL B 141 ? MET B 255 VAL B 259 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A1 1 2 N ILE A 32 ? N ILE A 150 O GLU A 4 ? O GLU A 122 A1 2 3 O CYS A 1 ? O CYS A 119 N LEU A 17 ? N LEU A 135 A1 3 4 N CYS A 16 ? N CYS A 134 O MET A 23 ? O MET A 141 A1 4 5 O VAL A 22 ? O VAL A 140 N ALA A 53 ? N ALA A 171 A1 5 6 N CYS A 52 ? N CYS A 170 O PHE A 42 ? O PHE A 160 A2 1 2 O GLY A 73 ? O GLY A 191 N TYR A 84 ? N TYR A 202 A2 2 3 O GLN A 83 ? O GLN A 201 N THR A 90 ? N THR A 208 A2 3 4 O PHE A 89 ? O PHE A 207 N LEU A 128 ? N LEU A 246 A2 4 5 O ALA A 127 ? O ALA A 245 N ALA A 120 ? N ALA A 238 A2 5 6 O ALA A 114 ? O ALA A 232 N ILE A 105 ? N ILE A 223 A2 6 7 N PHE A 106 ? N PHE A 224 O ASN A 76 ? O ASN A 194 A3 1 2 N THR A 132 ? N THR A 250 O THR A 139 ? O THR A 257 B1 1 2 N ILE B 32 ? N ILE B 150 O GLU B 4 ? O GLU B 122 B1 2 3 O CYS B 1 ? O CYS B 119 N LEU B 17 ? N LEU B 135 B1 3 4 N CYS B 16 ? N CYS B 134 O MET B 23 ? O MET B 141 B1 4 5 O VAL B 22 ? O VAL B 140 N ALA B 53 ? N ALA B 171 B1 5 6 N CYS B 52 ? N CYS B 170 O PHE B 42 ? O PHE B 160 B2 1 2 O GLY B 73 ? O GLY B 191 N TYR B 84 ? N TYR B 202 B2 2 3 O GLN B 83 ? O GLN B 201 N THR B 90 ? N THR B 208 B2 3 4 O PHE B 89 ? O PHE B 207 N LEU B 128 ? N LEU B 246 B2 4 5 O ALA B 127 ? O ALA B 245 N ALA B 120 ? N ALA B 238 B2 5 6 O ALA B 114 ? O ALA B 232 N ILE B 105 ? N ILE B 223 B2 6 7 N PHE B 106 ? N PHE B 224 O ASN B 76 ? O ASN B 194 B3 1 2 N THR B 132 ? N THR B 250 O THR B 139 ? O THR B 257 # _database_PDB_matrix.entry_id 1VCQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1VCQ _atom_sites.fract_transf_matrix[1][1] 0.018616 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005257 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020588 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014766 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CYS 1 119 119 CYS CYS A . n A 1 2 ILE 2 120 120 ILE ILE A . n A 1 3 PHE 3 121 121 PHE PHE A . n A 1 4 GLU 4 122 122 GLU GLU A . n A 1 5 VAL 5 123 123 VAL VAL A . n A 1 6 LYS 6 124 124 LYS LYS A . n A 1 7 HIS 7 125 125 HIS HIS A . n A 1 8 GLU 8 126 126 GLU GLU A . n A 1 9 GLY 9 127 127 GLY GLY A . n A 1 10 LYS 10 128 128 LYS LYS A . n A 1 11 VAL 11 129 129 VAL VAL A . n A 1 12 THR 12 130 130 THR THR A . n A 1 13 GLY 13 131 131 GLY GLY A . n A 1 14 TYR 14 132 132 TYR TYR A . n A 1 15 ALA 15 133 133 ALA ALA A . n A 1 16 CYS 16 134 134 CYS CYS A . n A 1 17 LEU 17 135 135 LEU LEU A . n A 1 18 VAL 18 136 136 VAL VAL A . n A 1 19 GLY 19 137 137 GLY GLY A . n A 1 20 ASP 20 138 138 ASP ASP A . n A 1 21 LYS 21 139 139 LYS LYS A . n A 1 22 VAL 22 140 140 VAL VAL A . n A 1 23 MET 23 141 141 MET MET A . n A 1 24 LYS 24 142 142 LYS LYS A . n A 1 25 PRO 25 143 143 PRO PRO A . n A 1 26 ALA 26 144 144 ALA ALA A . n A 1 27 HIS 27 145 145 HIS HIS A . n A 1 28 VAL 28 146 146 VAL VAL A . n A 1 29 LYS 29 147 147 LYS LYS A . n A 1 30 GLY 30 148 148 GLY GLY A . n A 1 31 VAL 31 149 149 VAL VAL A . n A 1 32 ILE 32 150 150 ILE ILE A . n A 1 33 ASP 33 151 151 ASP ASP A . n A 1 34 ASN 34 152 152 ASN ASN A . n A 1 35 ALA 35 153 153 ALA ALA A . n A 1 36 ASP 36 154 154 ASP ASP A . n A 1 37 LEU 37 155 155 LEU LEU A . n A 1 38 ALA 38 156 156 ALA ALA A . n A 1 39 LYS 39 157 157 LYS LYS A . n A 1 40 LEU 40 158 158 LEU LEU A . n A 1 41 ALA 41 159 159 ALA ALA A . n A 1 42 PHE 42 160 160 PHE PHE A . n A 1 43 LYS 43 161 161 LYS LYS A . n A 1 44 LYS 44 162 162 LYS LYS A . n A 1 45 SER 45 163 163 SER SER A . n A 1 46 SER 46 164 164 SER SER A . n A 1 47 LYS 47 165 165 LYS LYS A . n A 1 48 TYR 48 166 166 TYR TYR A . n A 1 49 ASP 49 167 167 ASP ASP A . n A 1 50 LEU 50 168 168 LEU LEU A . n A 1 51 GLU 51 169 169 GLU GLU A . n A 1 52 CYS 52 170 170 CYS CYS A . n A 1 53 ALA 53 171 171 ALA ALA A . n A 1 54 GLN 54 172 172 GLN GLN A . n A 1 55 ILE 55 173 173 ILE ILE A . n A 1 56 PRO 56 174 174 PRO PRO A . n A 1 57 VAL 57 175 175 VAL VAL A . n A 1 58 HIS 58 176 176 HIS HIS A . n A 1 59 MET 59 177 177 MET MET A . n A 1 60 ARG 60 178 178 ARG ARG A . n A 1 61 SER 61 179 179 SER SER A . n A 1 62 ASP 62 180 180 ASP ASP A . n A 1 63 ALA 63 181 181 ALA ALA A . n A 1 64 SER 64 182 182 SER SER A . n A 1 65 LYS 65 183 183 LYS LYS A . n A 1 66 TYR 66 184 184 TYR TYR A . n A 1 67 THR 67 185 185 THR THR A . n A 1 68 HIS 68 186 186 HIS HIS A . n A 1 69 GLU 69 187 187 GLU GLU A . n A 1 70 LYS 70 188 188 LYS LYS A . n A 1 71 PRO 71 189 189 PRO PRO A . n A 1 72 GLU 72 190 190 GLU GLU A . n A 1 73 GLY 73 191 191 GLY GLY A . n A 1 74 HIS 74 192 192 HIS HIS A . n A 1 75 TYR 75 193 193 TYR TYR A . n A 1 76 ASN 76 194 194 ASN ASN A . n A 1 77 TRP 77 195 195 TRP TRP A . n A 1 78 HIS 78 196 196 HIS HIS A . n A 1 79 HIS 79 197 197 HIS HIS A . n A 1 80 GLY 80 198 198 GLY GLY A . n A 1 81 ALA 81 199 199 ALA ALA A . n A 1 82 VAL 82 200 200 VAL VAL A . n A 1 83 GLN 83 201 201 GLN GLN A . n A 1 84 TYR 84 202 202 TYR TYR A . n A 1 85 SER 85 203 203 SER SER A . n A 1 86 GLY 86 204 204 GLY GLY A . n A 1 87 GLY 87 205 205 GLY GLY A . n A 1 88 ARG 88 206 206 ARG ARG A . n A 1 89 PHE 89 207 207 PHE PHE A . n A 1 90 THR 90 208 208 THR THR A . n A 1 91 ILE 91 209 209 ILE ILE A . n A 1 92 PRO 92 210 210 PRO PRO A . n A 1 93 THR 93 211 211 THR THR A . n A 1 94 GLY 94 212 212 GLY GLY A . n A 1 95 ALA 95 213 213 ALA ALA A . n A 1 96 GLY 96 214 214 GLY GLY A . n A 1 97 LYS 97 215 215 LYS LYS A . n A 1 98 PRO 98 216 216 PRO PRO A . n A 1 99 GLY 99 217 217 GLY GLY A . n A 1 100 ASP 100 218 218 ASP ASP A . n A 1 101 SER 101 219 219 SER SER A . n A 1 102 GLY 102 220 220 GLY GLY A . n A 1 103 ARG 103 221 221 ARG ARG A . n A 1 104 PRO 104 222 222 PRO PRO A . n A 1 105 ILE 105 223 223 ILE ILE A . n A 1 106 PHE 106 224 224 PHE PHE A . n A 1 107 ASP 107 225 225 ASP ASP A . n A 1 108 ASN 108 226 226 ASN ASN A . n A 1 109 LYS 109 227 227 LYS LYS A . n A 1 110 GLY 110 228 228 GLY GLY A . n A 1 111 ARG 111 229 229 ARG ARG A . n A 1 112 VAL 112 230 230 VAL VAL A . n A 1 113 VAL 113 231 231 VAL VAL A . n A 1 114 ALA 114 232 232 ALA ALA A . n A 1 115 ILE 115 233 233 ILE ILE A . n A 1 116 VAL 116 234 234 VAL VAL A . n A 1 117 LEU 117 235 235 LEU LEU A . n A 1 118 GLY 118 236 236 GLY GLY A . n A 1 119 GLY 119 237 237 GLY GLY A . n A 1 120 ALA 120 238 238 ALA ALA A . n A 1 121 ASN 121 239 239 ASN ASN A . n A 1 122 GLU 122 240 240 GLU GLU A . n A 1 123 GLY 123 241 241 GLY GLY A . n A 1 124 SER 124 242 242 SER SER A . n A 1 125 ARG 125 243 243 ARG ARG A . n A 1 126 THR 126 244 244 THR THR A . n A 1 127 ALA 127 245 245 ALA ALA A . n A 1 128 LEU 128 246 246 LEU LEU A . n A 1 129 SER 129 247 247 SER SER A . n A 1 130 VAL 130 248 248 VAL VAL A . n A 1 131 VAL 131 249 249 VAL VAL A . n A 1 132 THR 132 250 250 THR THR A . n A 1 133 TRP 133 251 251 TRP TRP A . n A 1 134 ASN 134 252 252 ASN ASN A . n A 1 135 LYS 135 253 253 LYS LYS A . n A 1 136 ASP 136 254 254 ASP ASP A . n A 1 137 MET 137 255 255 MET MET A . n A 1 138 VAL 138 256 256 VAL VAL A . n A 1 139 THR 139 257 257 THR THR A . n A 1 140 ARG 140 258 258 ARG ARG A . n A 1 141 VAL 141 259 259 VAL VAL A . n A 1 142 THR 142 260 260 THR THR A . n A 1 143 PRO 143 261 261 PRO PRO A . n A 1 144 GLU 144 262 262 GLU GLU A . n A 1 145 GLY 145 263 263 GLY GLY A . n A 1 146 SER 146 264 264 SER SER A . n A 1 147 GLU 147 265 265 GLU GLU A . n A 1 148 GLU 148 266 266 GLU GLU A . n A 1 149 TRP 149 267 267 TRP TRP A . n B 1 1 CYS 1 119 119 CYS CYS B . n B 1 2 ILE 2 120 120 ILE ILE B . n B 1 3 PHE 3 121 121 PHE PHE B . n B 1 4 GLU 4 122 122 GLU GLU B . n B 1 5 VAL 5 123 123 VAL VAL B . n B 1 6 LYS 6 124 124 LYS LYS B . n B 1 7 HIS 7 125 125 HIS HIS B . n B 1 8 GLU 8 126 126 GLU GLU B . n B 1 9 GLY 9 127 127 GLY GLY B . n B 1 10 LYS 10 128 128 LYS LYS B . n B 1 11 VAL 11 129 129 VAL VAL B . n B 1 12 THR 12 130 130 THR THR B . n B 1 13 GLY 13 131 131 GLY GLY B . n B 1 14 TYR 14 132 132 TYR TYR B . n B 1 15 ALA 15 133 133 ALA ALA B . n B 1 16 CYS 16 134 134 CYS CYS B . n B 1 17 LEU 17 135 135 LEU LEU B . n B 1 18 VAL 18 136 136 VAL VAL B . n B 1 19 GLY 19 137 137 GLY GLY B . n B 1 20 ASP 20 138 138 ASP ASP B . n B 1 21 LYS 21 139 139 LYS LYS B . n B 1 22 VAL 22 140 140 VAL VAL B . n B 1 23 MET 23 141 141 MET MET B . n B 1 24 LYS 24 142 142 LYS LYS B . n B 1 25 PRO 25 143 143 PRO PRO B . n B 1 26 ALA 26 144 144 ALA ALA B . n B 1 27 HIS 27 145 145 HIS HIS B . n B 1 28 VAL 28 146 146 VAL VAL B . n B 1 29 LYS 29 147 147 LYS LYS B . n B 1 30 GLY 30 148 148 GLY GLY B . n B 1 31 VAL 31 149 149 VAL VAL B . n B 1 32 ILE 32 150 150 ILE ILE B . n B 1 33 ASP 33 151 151 ASP ASP B . n B 1 34 ASN 34 152 152 ASN ASN B . n B 1 35 ALA 35 153 153 ALA ALA B . n B 1 36 ASP 36 154 154 ASP ASP B . n B 1 37 LEU 37 155 155 LEU LEU B . n B 1 38 ALA 38 156 156 ALA ALA B . n B 1 39 LYS 39 157 157 LYS LYS B . n B 1 40 LEU 40 158 158 LEU LEU B . n B 1 41 ALA 41 159 159 ALA ALA B . n B 1 42 PHE 42 160 160 PHE PHE B . n B 1 43 LYS 43 161 161 LYS LYS B . n B 1 44 LYS 44 162 162 LYS LYS B . n B 1 45 SER 45 163 163 SER SER B . n B 1 46 SER 46 164 164 SER SER B . n B 1 47 LYS 47 165 165 LYS LYS B . n B 1 48 TYR 48 166 166 TYR TYR B . n B 1 49 ASP 49 167 167 ASP ASP B . n B 1 50 LEU 50 168 168 LEU LEU B . n B 1 51 GLU 51 169 169 GLU GLU B . n B 1 52 CYS 52 170 170 CYS CYS B . n B 1 53 ALA 53 171 171 ALA ALA B . n B 1 54 GLN 54 172 172 GLN GLN B . n B 1 55 ILE 55 173 173 ILE ILE B . n B 1 56 PRO 56 174 174 PRO PRO B . n B 1 57 VAL 57 175 175 VAL VAL B . n B 1 58 HIS 58 176 176 HIS HIS B . n B 1 59 MET 59 177 177 MET MET B . n B 1 60 ARG 60 178 178 ARG ARG B . n B 1 61 SER 61 179 179 SER SER B . n B 1 62 ASP 62 180 180 ASP ASP B . n B 1 63 ALA 63 181 181 ALA ALA B . n B 1 64 SER 64 182 182 SER SER B . n B 1 65 LYS 65 183 183 LYS LYS B . n B 1 66 TYR 66 184 184 TYR TYR B . n B 1 67 THR 67 185 185 THR THR B . n B 1 68 HIS 68 186 186 HIS HIS B . n B 1 69 GLU 69 187 187 GLU GLU B . n B 1 70 LYS 70 188 188 LYS LYS B . n B 1 71 PRO 71 189 189 PRO PRO B . n B 1 72 GLU 72 190 190 GLU GLU B . n B 1 73 GLY 73 191 191 GLY GLY B . n B 1 74 HIS 74 192 192 HIS HIS B . n B 1 75 TYR 75 193 193 TYR TYR B . n B 1 76 ASN 76 194 194 ASN ASN B . n B 1 77 TRP 77 195 195 TRP TRP B . n B 1 78 HIS 78 196 196 HIS HIS B . n B 1 79 HIS 79 197 197 HIS HIS B . n B 1 80 GLY 80 198 198 GLY GLY B . n B 1 81 ALA 81 199 199 ALA ALA B . n B 1 82 VAL 82 200 200 VAL VAL B . n B 1 83 GLN 83 201 201 GLN GLN B . n B 1 84 TYR 84 202 202 TYR TYR B . n B 1 85 SER 85 203 203 SER SER B . n B 1 86 GLY 86 204 204 GLY GLY B . n B 1 87 GLY 87 205 205 GLY GLY B . n B 1 88 ARG 88 206 206 ARG ARG B . n B 1 89 PHE 89 207 207 PHE PHE B . n B 1 90 THR 90 208 208 THR THR B . n B 1 91 ILE 91 209 209 ILE ILE B . n B 1 92 PRO 92 210 210 PRO PRO B . n B 1 93 THR 93 211 211 THR THR B . n B 1 94 GLY 94 212 212 GLY GLY B . n B 1 95 ALA 95 213 213 ALA ALA B . n B 1 96 GLY 96 214 214 GLY GLY B . n B 1 97 LYS 97 215 215 LYS LYS B . n B 1 98 PRO 98 216 216 PRO PRO B . n B 1 99 GLY 99 217 217 GLY GLY B . n B 1 100 ASP 100 218 218 ASP ASP B . n B 1 101 SER 101 219 219 SER SER B . n B 1 102 GLY 102 220 220 GLY GLY B . n B 1 103 ARG 103 221 221 ARG ARG B . n B 1 104 PRO 104 222 222 PRO PRO B . n B 1 105 ILE 105 223 223 ILE ILE B . n B 1 106 PHE 106 224 224 PHE PHE B . n B 1 107 ASP 107 225 225 ASP ASP B . n B 1 108 ASN 108 226 226 ASN ASN B . n B 1 109 LYS 109 227 227 LYS LYS B . n B 1 110 GLY 110 228 228 GLY GLY B . n B 1 111 ARG 111 229 229 ARG ARG B . n B 1 112 VAL 112 230 230 VAL VAL B . n B 1 113 VAL 113 231 231 VAL VAL B . n B 1 114 ALA 114 232 232 ALA ALA B . n B 1 115 ILE 115 233 233 ILE ILE B . n B 1 116 VAL 116 234 234 VAL VAL B . n B 1 117 LEU 117 235 235 LEU LEU B . n B 1 118 GLY 118 236 236 GLY GLY B . n B 1 119 GLY 119 237 237 GLY GLY B . n B 1 120 ALA 120 238 238 ALA ALA B . n B 1 121 ASN 121 239 239 ASN ASN B . n B 1 122 GLU 122 240 240 GLU GLU B . n B 1 123 GLY 123 241 241 GLY GLY B . n B 1 124 SER 124 242 242 SER SER B . n B 1 125 ARG 125 243 243 ARG ARG B . n B 1 126 THR 126 244 244 THR THR B . n B 1 127 ALA 127 245 245 ALA ALA B . n B 1 128 LEU 128 246 246 LEU LEU B . n B 1 129 SER 129 247 247 SER SER B . n B 1 130 VAL 130 248 248 VAL VAL B . n B 1 131 VAL 131 249 249 VAL VAL B . n B 1 132 THR 132 250 250 THR THR B . n B 1 133 TRP 133 251 251 TRP TRP B . n B 1 134 ASN 134 252 252 ASN ASN B . n B 1 135 LYS 135 253 253 LYS LYS B . n B 1 136 ASP 136 254 254 ASP ASP B . n B 1 137 MET 137 255 255 MET MET B . n B 1 138 VAL 138 256 256 VAL VAL B . n B 1 139 THR 139 257 257 THR THR B . n B 1 140 ARG 140 258 258 ARG ARG B . n B 1 141 VAL 141 259 259 VAL VAL B . n B 1 142 THR 142 260 260 THR THR B . n B 1 143 PRO 143 261 261 PRO PRO B . n B 1 144 GLU 144 262 262 GLU GLU B . n B 1 145 GLY 145 263 263 GLY GLY B . n B 1 146 SER 146 264 264 SER SER B . n B 1 147 GLU 147 265 265 GLU GLU B . n B 1 148 GLU 148 266 266 GLU GLU B . n B 1 149 TRP 149 267 267 TRP TRP B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1996-12-07 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal XDS 'data scaling' . ? 1 X-PLOR 'model building' . ? 2 X-PLOR refinement . ? 3 XDS 'data reduction' . ? 4 X-PLOR phasing . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A CYS 134 ? ? CB A CYS 134 ? ? SG A CYS 134 ? ? 121.31 114.20 7.11 1.10 N 2 1 CA B CYS 134 ? ? CB B CYS 134 ? ? SG B CYS 134 ? ? 122.46 114.20 8.26 1.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 151 ? ? -75.94 41.60 2 1 GLU A 169 ? ? -162.17 76.21 3 1 GLU A 187 ? ? -61.65 95.72 4 1 HIS A 197 ? ? -99.78 52.48 5 1 ASN A 252 ? ? -164.86 79.66 6 1 ASP B 151 ? ? -76.25 36.44 7 1 GLU B 169 ? ? -161.62 73.53 8 1 GLU B 187 ? ? -60.83 96.19 9 1 HIS B 197 ? ? -104.85 57.00 10 1 ASN B 252 ? ? -156.46 79.79 11 1 ASP B 254 ? ? 55.82 70.73 12 1 MET B 255 ? ? -172.94 134.59 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 253 ? CB ? A LYS 135 CB 2 1 Y 0 A LYS 253 ? CG ? A LYS 135 CG 3 1 Y 0 A LYS 253 ? CD ? A LYS 135 CD 4 1 Y 0 A LYS 253 ? CE ? A LYS 135 CE 5 1 Y 0 A LYS 253 ? NZ ? A LYS 135 NZ 6 1 Y 0 A ASP 254 ? CB ? A ASP 136 CB 7 1 Y 0 A ASP 254 ? CG ? A ASP 136 CG 8 1 Y 0 A ASP 254 ? OD1 ? A ASP 136 OD1 9 1 Y 0 A ASP 254 ? OD2 ? A ASP 136 OD2 10 1 Y 0 B LYS 253 ? CB ? B LYS 135 CB 11 1 Y 0 B LYS 253 ? CG ? B LYS 135 CG 12 1 Y 0 B LYS 253 ? CD ? B LYS 135 CD 13 1 Y 0 B LYS 253 ? CE ? B LYS 135 CE 14 1 Y 0 B LYS 253 ? NZ ? B LYS 135 NZ 15 1 Y 0 B ASP 254 ? CB ? B ASP 136 CB 16 1 Y 0 B ASP 254 ? CG ? B ASP 136 CG 17 1 Y 0 B ASP 254 ? OD1 ? B ASP 136 OD1 18 1 Y 0 B ASP 254 ? OD2 ? B ASP 136 OD2 #