HEADER TRANSCRIPTION 20-MAR-04 1VD9 TITLE SOLUTION STRUCTURE OF FMBP-1 TANDEM REPEAT 3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBROIN-MODULATOR-BINDING-PROTEIN-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FMBP-1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: SYNTHETIC CONSTRUCT KEYWDS TANDEM REPEAT, N-CAP, DNA BINDING, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 15 AUTHOR K.KAWAGUCHI,T.YAMAKI,T.AIZAWA,S.TAKIYA,M.DEMURA,K.NITTA REVDAT 4 27-DEC-23 1VD9 1 REMARK REVDAT 3 02-MAR-22 1VD9 1 REMARK REVDAT 2 24-FEB-09 1VD9 1 VERSN REVDAT 1 29-MAR-05 1VD9 0 JRNL AUTH K.KAWAGUCHI,T.YAMAKI,T.AIZAWA,S.TAKIYA,M.DEMURA,K.NITTA JRNL TITL SOLUTION STRUCTURE OF FMBP-1 TANDEM REPEAT 3 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE REMARK 3 -KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE, REMARK 3 SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THE STRUCTURES ARE BASED ON A TOTAL OF 184 RESTRAINTS, 182 ARE NOE- REMARK 3 DERIVED REMARK 3 DISTANCE CONSTRAINTS AND 2 ARE DIHEDRAL ANGLE RESTRAINTS. REMARK 4 REMARK 4 1VD9 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-MAR-04. REMARK 100 THE DEPOSITION ID IS D_1000006487. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 4 REMARK 210 IONIC STRENGTH : 60MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.5MM PEPTIDE; PH 4 (10MM SODIUM REMARK 210 PHOSPHATE BUFFER, 60MM NACL); 90% REMARK 210 H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : DQF-COSY; 2D TOCSY; 2D NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX; ALPHA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; JEOL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 8 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD 2D REMARK 210 HOMONUCLEAR TECHNIQUES. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ARG A 12 48.87 -104.57 REMARK 500 1 MET A 13 -65.99 -148.16 REMARK 500 1 TYR A 16 -155.25 -174.29 REMARK 500 1 ALA A 17 65.59 70.83 REMARK 500 1 ARG A 20 86.53 60.34 REMARK 500 1 LEU A 21 33.46 -156.57 REMARK 500 2 MET A 13 -59.56 -126.97 REMARK 500 2 SER A 14 -164.24 -107.55 REMARK 500 2 TYR A 16 -159.92 -171.28 REMARK 500 2 ALA A 17 -81.00 63.03 REMARK 500 2 ALA A 18 31.56 -165.13 REMARK 500 2 ARG A 19 57.20 -109.89 REMARK 500 2 ARG A 20 106.03 58.36 REMARK 500 3 SER A 14 -165.25 -107.62 REMARK 500 3 TYR A 16 -159.15 -177.59 REMARK 500 3 ALA A 17 177.54 65.68 REMARK 500 3 ALA A 18 -79.60 64.05 REMARK 500 3 ARG A 19 37.04 -161.88 REMARK 500 3 ALA A 22 -69.35 -150.64 REMARK 500 4 ARG A 12 31.59 -97.88 REMARK 500 4 TYR A 16 -159.75 179.40 REMARK 500 4 ALA A 17 62.17 61.02 REMARK 500 4 LEU A 21 161.85 59.35 REMARK 500 4 ALA A 22 176.71 61.73 REMARK 500 5 MET A 13 45.80 -94.12 REMARK 500 5 SER A 14 -161.76 -104.24 REMARK 500 5 TYR A 16 -159.55 -176.12 REMARK 500 5 ALA A 17 84.20 64.58 REMARK 500 5 ALA A 22 38.03 -156.93 REMARK 500 6 ARG A 12 48.83 -91.05 REMARK 500 6 SER A 14 -163.60 55.44 REMARK 500 6 ALA A 15 -162.18 60.50 REMARK 500 6 ALA A 17 -42.97 -168.24 REMARK 500 6 ALA A 18 -61.86 -146.10 REMARK 500 6 LEU A 21 175.13 59.95 REMARK 500 6 ALA A 22 72.91 60.40 REMARK 500 7 ARG A 12 38.27 -97.59 REMARK 500 7 MET A 13 -45.29 -158.99 REMARK 500 7 SER A 14 -161.28 -71.88 REMARK 500 7 ALA A 15 -161.14 59.85 REMARK 500 7 ALA A 17 70.72 -175.41 REMARK 500 7 ALA A 18 86.02 58.84 REMARK 500 7 ARG A 19 -71.56 -172.77 REMARK 500 7 ARG A 20 71.11 -152.93 REMARK 500 7 ALA A 22 -76.15 -59.84 REMARK 500 8 MET A 13 82.08 -63.62 REMARK 500 8 SER A 14 -163.41 -73.41 REMARK 500 8 TYR A 16 -158.21 -171.65 REMARK 500 8 ALA A 17 -168.01 70.57 REMARK 500 8 ALA A 18 30.15 -97.61 REMARK 500 REMARK 500 THIS ENTRY HAS 85 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1VD7 RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF FMBP-1 TANDEM REPEAT 1 REMARK 900 RELATED ID: 1VD8 RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF FMBP-1 TANDEM REPEAT 2 REMARK 900 RELATED ID: 1VDA RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF FMBP-1 TANDEM REPEAT 4 REMARK 900 RELATED ID: 1VDB RELATED DB: PDB REMARK 900 NMR STRUCTURE OF FMBP-1 TANDEM REPEAT 1 IN 30%(V/V) TFE SOLUTION DBREF 1VD9 A 1 23 PDB 1VD9 1VD9 1 23 SEQRES 1 A 23 GLU THR ARG GLU GLN ARG ALA ILE ARG LEU ALA ARG MET SEQRES 2 A 23 SER ALA TYR ALA ALA ARG ARG LEU ALA ASN HELIX 1 1 THR A 2 ARG A 12 1 11 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1