data_1VF6 # _entry.id 1VF6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1VF6 pdb_00001vf6 10.2210/pdb1vf6/pdb RCSB RCSB006551 ? ? WWPDB D_1000006551 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-04-20 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2016-12-07 5 'Structure model' 1 4 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Other 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1VF6 _pdbx_database_status.recvd_initial_deposition_date 2004-04-09 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1RSO _pdbx_database_related.details 'the protein sequence we used is has similarity to the 1RSO sequence, but our proteins are totally different proteins' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Li, Y.' 1 'Lavie, A.' 2 'Margolis, B.' 3 'Karnak, D.' 4 # _citation.id primary _citation.title 'Structural basis for L27 domain-mediated assembly of signaling and cell polarity complexes.' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 23 _citation.page_first 2723 _citation.page_last 2733 _citation.year 2004 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15241471 _citation.pdbx_database_id_DOI 10.1038/sj.emboj.7600294 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, Y.' 1 ? primary 'Karnak, D.' 2 ? primary 'Demeler, B.' 3 ? primary 'Margolis, B.' 4 ? primary 'Lavie, A.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PALS1-associated tight junction protein' 9537.022 2 ? ? 'L27N domain' ? 2 polymer man 'MAGUK p55 subfamily member 5' 8245.114 2 ? ? 'L27 domain' ? 3 water nat water 18.015 94 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 PALS-1 2 'PATJ, Protein associated with Lin-7 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MKLQVLQVLDRLKMKLQEKGDTSQNEKLSMFYETLKSPLFNQILTLQQSIKQLKGQLNHILESGKETAAAKFERQHMDSS TSA ; ;MKLQVLQVLDRLKMKLQEKGDTSQNEKLSMFYETLKSPLFNQILTLQQSIKQLKGQLNHILESGKETAAAKFERQHMDSS TSA ; A,B ? 2 'polypeptide(L)' no no MGSSHHHHHHSQDPDVEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNRDFQNAFKIHNAVTVHMSKASPPF MGSSHHHHHHSQDPDVEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNRDFQNAFKIHNAVTVHMSKASPPF C,D ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 LEU n 1 4 GLN n 1 5 VAL n 1 6 LEU n 1 7 GLN n 1 8 VAL n 1 9 LEU n 1 10 ASP n 1 11 ARG n 1 12 LEU n 1 13 LYS n 1 14 MET n 1 15 LYS n 1 16 LEU n 1 17 GLN n 1 18 GLU n 1 19 LYS n 1 20 GLY n 1 21 ASP n 1 22 THR n 1 23 SER n 1 24 GLN n 1 25 ASN n 1 26 GLU n 1 27 LYS n 1 28 LEU n 1 29 SER n 1 30 MET n 1 31 PHE n 1 32 TYR n 1 33 GLU n 1 34 THR n 1 35 LEU n 1 36 LYS n 1 37 SER n 1 38 PRO n 1 39 LEU n 1 40 PHE n 1 41 ASN n 1 42 GLN n 1 43 ILE n 1 44 LEU n 1 45 THR n 1 46 LEU n 1 47 GLN n 1 48 GLN n 1 49 SER n 1 50 ILE n 1 51 LYS n 1 52 GLN n 1 53 LEU n 1 54 LYS n 1 55 GLY n 1 56 GLN n 1 57 LEU n 1 58 ASN n 1 59 HIS n 1 60 ILE n 1 61 LEU n 1 62 GLU n 1 63 SER n 1 64 GLY n 1 65 LYS n 1 66 GLU n 1 67 THR n 1 68 ALA n 1 69 ALA n 1 70 ALA n 1 71 LYS n 1 72 PHE n 1 73 GLU n 1 74 ARG n 1 75 GLN n 1 76 HIS n 1 77 MET n 1 78 ASP n 1 79 SER n 1 80 SER n 1 81 THR n 1 82 SER n 1 83 ALA n 2 1 MET n 2 2 GLY n 2 3 SER n 2 4 SER n 2 5 HIS n 2 6 HIS n 2 7 HIS n 2 8 HIS n 2 9 HIS n 2 10 HIS n 2 11 SER n 2 12 GLN n 2 13 ASP n 2 14 PRO n 2 15 ASP n 2 16 VAL n 2 17 GLU n 2 18 ASP n 2 19 LEU n 2 20 PHE n 2 21 SER n 2 22 SER n 2 23 LEU n 2 24 LYS n 2 25 HIS n 2 26 ILE n 2 27 GLN n 2 28 HIS n 2 29 THR n 2 30 LEU n 2 31 VAL n 2 32 ASP n 2 33 SER n 2 34 GLN n 2 35 SER n 2 36 GLN n 2 37 GLU n 2 38 ASP n 2 39 ILE n 2 40 SER n 2 41 LEU n 2 42 LEU n 2 43 LEU n 2 44 GLN n 2 45 LEU n 2 46 VAL n 2 47 GLN n 2 48 ASN n 2 49 ARG n 2 50 ASP n 2 51 PHE n 2 52 GLN n 2 53 ASN n 2 54 ALA n 2 55 PHE n 2 56 LYS n 2 57 ILE n 2 58 HIS n 2 59 ASN n 2 60 ALA n 2 61 VAL n 2 62 THR n 2 63 VAL n 2 64 HIS n 2 65 MET n 2 66 SER n 2 67 LYS n 2 68 ALA n 2 69 SER n 2 70 PRO n 2 71 PRO n 2 72 PHE n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human Homo ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 Escherichia ? ? 'Escherichia coli' ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pACYCDuet-1 ? ? 2 1 sample ? ? ? 'house mouse' Mus ? ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 Escherichia ? ? 'Escherichia coli' ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pACYCDuet-1 ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 8 ? ? ? A . n A 1 2 LYS 2 9 ? ? ? A . n A 1 3 LEU 3 10 ? ? ? A . n A 1 4 GLN 4 11 ? ? ? A . n A 1 5 VAL 5 12 12 VAL VAL A . n A 1 6 LEU 6 13 13 LEU LEU A . n A 1 7 GLN 7 14 14 GLN GLN A . n A 1 8 VAL 8 15 15 VAL VAL A . n A 1 9 LEU 9 16 16 LEU LEU A . n A 1 10 ASP 10 17 17 ASP ASP A . n A 1 11 ARG 11 18 18 ARG ARG A . n A 1 12 LEU 12 19 19 LEU LEU A . n A 1 13 LYS 13 20 20 LYS LYS A . n A 1 14 MET 14 21 21 MET MET A . n A 1 15 LYS 15 22 22 LYS LYS A . n A 1 16 LEU 16 23 23 LEU LEU A . n A 1 17 GLN 17 24 24 GLN GLN A . n A 1 18 GLU 18 25 25 GLU GLU A . n A 1 19 LYS 19 26 26 LYS LYS A . n A 1 20 GLY 20 27 27 GLY GLY A . n A 1 21 ASP 21 28 28 ASP ASP A . n A 1 22 THR 22 29 29 THR THR A . n A 1 23 SER 23 30 30 SER SER A . n A 1 24 GLN 24 31 31 GLN GLN A . n A 1 25 ASN 25 32 32 ASN ASN A . n A 1 26 GLU 26 33 33 GLU GLU A . n A 1 27 LYS 27 34 34 LYS LYS A . n A 1 28 LEU 28 35 35 LEU LEU A . n A 1 29 SER 29 36 36 SER SER A . n A 1 30 MET 30 37 37 MET MET A . n A 1 31 PHE 31 38 38 PHE PHE A . n A 1 32 TYR 32 39 39 TYR TYR A . n A 1 33 GLU 33 40 40 GLU GLU A . n A 1 34 THR 34 41 41 THR THR A . n A 1 35 LEU 35 42 42 LEU LEU A . n A 1 36 LYS 36 43 43 LYS LYS A . n A 1 37 SER 37 44 44 SER SER A . n A 1 38 PRO 38 45 45 PRO PRO A . n A 1 39 LEU 39 46 46 LEU LEU A . n A 1 40 PHE 40 47 47 PHE PHE A . n A 1 41 ASN 41 48 48 ASN ASN A . n A 1 42 GLN 42 49 49 GLN GLN A . n A 1 43 ILE 43 50 50 ILE ILE A . n A 1 44 LEU 44 51 51 LEU LEU A . n A 1 45 THR 45 52 52 THR THR A . n A 1 46 LEU 46 53 53 LEU LEU A . n A 1 47 GLN 47 54 54 GLN GLN A . n A 1 48 GLN 48 55 55 GLN GLN A . n A 1 49 SER 49 56 56 SER SER A . n A 1 50 ILE 50 57 57 ILE ILE A . n A 1 51 LYS 51 58 58 LYS LYS A . n A 1 52 GLN 52 59 59 GLN GLN A . n A 1 53 LEU 53 60 60 LEU LEU A . n A 1 54 LYS 54 61 61 LYS LYS A . n A 1 55 GLY 55 62 62 GLY GLY A . n A 1 56 GLN 56 63 63 GLN GLN A . n A 1 57 LEU 57 64 64 LEU LEU A . n A 1 58 ASN 58 65 65 ASN ASN A . n A 1 59 HIS 59 66 66 HIS HIS A . n A 1 60 ILE 60 67 67 ILE ILE A . n A 1 61 LEU 61 68 68 LEU LEU A . n A 1 62 GLU 62 69 69 GLU GLU A . n A 1 63 SER 63 70 ? ? ? A . n A 1 64 GLY 64 71 ? ? ? A . n A 1 65 LYS 65 72 ? ? ? A . n A 1 66 GLU 66 73 ? ? ? A . n A 1 67 THR 67 74 ? ? ? A . n A 1 68 ALA 68 75 ? ? ? A . n A 1 69 ALA 69 76 ? ? ? A . n A 1 70 ALA 70 77 ? ? ? A . n A 1 71 LYS 71 78 ? ? ? A . n A 1 72 PHE 72 79 ? ? ? A . n A 1 73 GLU 73 80 ? ? ? A . n A 1 74 ARG 74 81 ? ? ? A . n A 1 75 GLN 75 82 ? ? ? A . n A 1 76 HIS 76 83 ? ? ? A . n A 1 77 MET 77 84 ? ? ? A . n A 1 78 ASP 78 85 ? ? ? A . n A 1 79 SER 79 86 ? ? ? A . n A 1 80 SER 80 87 ? ? ? A . n A 1 81 THR 81 88 ? ? ? A . n A 1 82 SER 82 89 ? ? ? A . n A 1 83 ALA 83 90 ? ? ? A . n B 1 1 MET 1 8 ? ? ? B . n B 1 2 LYS 2 9 ? ? ? B . n B 1 3 LEU 3 10 10 LEU LEU B . n B 1 4 GLN 4 11 11 GLN GLN B . n B 1 5 VAL 5 12 12 VAL VAL B . n B 1 6 LEU 6 13 13 LEU LEU B . n B 1 7 GLN 7 14 14 GLN GLN B . n B 1 8 VAL 8 15 15 VAL VAL B . n B 1 9 LEU 9 16 16 LEU LEU B . n B 1 10 ASP 10 17 17 ASP ASP B . n B 1 11 ARG 11 18 18 ARG ARG B . n B 1 12 LEU 12 19 19 LEU LEU B . n B 1 13 LYS 13 20 20 LYS LYS B . n B 1 14 MET 14 21 21 MET MET B . n B 1 15 LYS 15 22 22 LYS LYS B . n B 1 16 LEU 16 23 23 LEU LEU B . n B 1 17 GLN 17 24 24 GLN GLN B . n B 1 18 GLU 18 25 25 GLU GLU B . n B 1 19 LYS 19 26 26 LYS LYS B . n B 1 20 GLY 20 27 27 GLY GLY B . n B 1 21 ASP 21 28 28 ASP ASP B . n B 1 22 THR 22 29 29 THR THR B . n B 1 23 SER 23 30 30 SER SER B . n B 1 24 GLN 24 31 31 GLN GLN B . n B 1 25 ASN 25 32 32 ASN ASN B . n B 1 26 GLU 26 33 33 GLU GLU B . n B 1 27 LYS 27 34 34 LYS LYS B . n B 1 28 LEU 28 35 35 LEU LEU B . n B 1 29 SER 29 36 36 SER SER B . n B 1 30 MET 30 37 37 MET MET B . n B 1 31 PHE 31 38 38 PHE PHE B . n B 1 32 TYR 32 39 39 TYR TYR B . n B 1 33 GLU 33 40 40 GLU GLU B . n B 1 34 THR 34 41 41 THR THR B . n B 1 35 LEU 35 42 42 LEU LEU B . n B 1 36 LYS 36 43 43 LYS LYS B . n B 1 37 SER 37 44 44 SER SER B . n B 1 38 PRO 38 45 45 PRO PRO B . n B 1 39 LEU 39 46 46 LEU LEU B . n B 1 40 PHE 40 47 47 PHE PHE B . n B 1 41 ASN 41 48 48 ASN ASN B . n B 1 42 GLN 42 49 49 GLN GLN B . n B 1 43 ILE 43 50 50 ILE ILE B . n B 1 44 LEU 44 51 51 LEU LEU B . n B 1 45 THR 45 52 52 THR THR B . n B 1 46 LEU 46 53 53 LEU LEU B . n B 1 47 GLN 47 54 54 GLN GLN B . n B 1 48 GLN 48 55 55 GLN GLN B . n B 1 49 SER 49 56 56 SER SER B . n B 1 50 ILE 50 57 57 ILE ILE B . n B 1 51 LYS 51 58 58 LYS LYS B . n B 1 52 GLN 52 59 59 GLN GLN B . n B 1 53 LEU 53 60 60 LEU LEU B . n B 1 54 LYS 54 61 61 LYS LYS B . n B 1 55 GLY 55 62 62 GLY GLY B . n B 1 56 GLN 56 63 63 GLN GLN B . n B 1 57 LEU 57 64 64 LEU LEU B . n B 1 58 ASN 58 65 65 ASN ASN B . n B 1 59 HIS 59 66 66 HIS HIS B . n B 1 60 ILE 60 67 67 ILE ILE B . n B 1 61 LEU 61 68 68 LEU LEU B . n B 1 62 GLU 62 69 69 GLU GLU B . n B 1 63 SER 63 70 ? ? ? B . n B 1 64 GLY 64 71 ? ? ? B . n B 1 65 LYS 65 72 ? ? ? B . n B 1 66 GLU 66 73 ? ? ? B . n B 1 67 THR 67 74 ? ? ? B . n B 1 68 ALA 68 75 ? ? ? B . n B 1 69 ALA 69 76 ? ? ? B . n B 1 70 ALA 70 77 ? ? ? B . n B 1 71 LYS 71 78 ? ? ? B . n B 1 72 PHE 72 79 ? ? ? B . n B 1 73 GLU 73 80 ? ? ? B . n B 1 74 ARG 74 81 ? ? ? B . n B 1 75 GLN 75 82 ? ? ? B . n B 1 76 HIS 76 83 ? ? ? B . n B 1 77 MET 77 84 ? ? ? B . n B 1 78 ASP 78 85 ? ? ? B . n B 1 79 SER 79 86 ? ? ? B . n B 1 80 SER 80 87 ? ? ? B . n B 1 81 THR 81 88 ? ? ? B . n B 1 82 SER 82 89 ? ? ? B . n B 1 83 ALA 83 90 ? ? ? B . n C 2 1 MET 1 109 ? ? ? C . n C 2 2 GLY 2 110 ? ? ? C . n C 2 3 SER 3 111 ? ? ? C . n C 2 4 SER 4 112 ? ? ? C . n C 2 5 HIS 5 113 ? ? ? C . n C 2 6 HIS 6 114 ? ? ? C . n C 2 7 HIS 7 115 ? ? ? C . n C 2 8 HIS 8 116 ? ? ? C . n C 2 9 HIS 9 117 ? ? ? C . n C 2 10 HIS 10 118 ? ? ? C . n C 2 11 SER 11 119 ? ? ? C . n C 2 12 GLN 12 120 120 GLN GLN C . n C 2 13 ASP 13 121 121 ASP ASP C . n C 2 14 PRO 14 122 122 PRO PRO C . n C 2 15 ASP 15 123 123 ASP ASP C . n C 2 16 VAL 16 124 124 VAL VAL C . n C 2 17 GLU 17 125 125 GLU GLU C . n C 2 18 ASP 18 126 126 ASP ASP C . n C 2 19 LEU 19 127 127 LEU LEU C . n C 2 20 PHE 20 128 128 PHE PHE C . n C 2 21 SER 21 129 129 SER SER C . n C 2 22 SER 22 130 130 SER SER C . n C 2 23 LEU 23 131 131 LEU LEU C . n C 2 24 LYS 24 132 132 LYS LYS C . n C 2 25 HIS 25 133 133 HIS HIS C . n C 2 26 ILE 26 134 134 ILE ILE C . n C 2 27 GLN 27 135 135 GLN GLN C . n C 2 28 HIS 28 136 136 HIS HIS C . n C 2 29 THR 29 137 137 THR THR C . n C 2 30 LEU 30 138 138 LEU LEU C . n C 2 31 VAL 31 139 139 VAL VAL C . n C 2 32 ASP 32 140 140 ASP ASP C . n C 2 33 SER 33 141 141 SER SER C . n C 2 34 GLN 34 142 142 GLN GLN C . n C 2 35 SER 35 143 143 SER SER C . n C 2 36 GLN 36 144 144 GLN GLN C . n C 2 37 GLU 37 145 145 GLU GLU C . n C 2 38 ASP 38 146 146 ASP ASP C . n C 2 39 ILE 39 147 147 ILE ILE C . n C 2 40 SER 40 148 148 SER SER C . n C 2 41 LEU 41 149 149 LEU LEU C . n C 2 42 LEU 42 150 150 LEU LEU C . n C 2 43 LEU 43 151 151 LEU LEU C . n C 2 44 GLN 44 152 152 GLN GLN C . n C 2 45 LEU 45 153 153 LEU LEU C . n C 2 46 VAL 46 154 154 VAL VAL C . n C 2 47 GLN 47 155 155 GLN GLN C . n C 2 48 ASN 48 156 156 ASN ASN C . n C 2 49 ARG 49 157 157 ARG ARG C . n C 2 50 ASP 50 158 158 ASP ASP C . n C 2 51 PHE 51 159 159 PHE PHE C . n C 2 52 GLN 52 160 160 GLN GLN C . n C 2 53 ASN 53 161 161 ASN ASN C . n C 2 54 ALA 54 162 162 ALA ALA C . n C 2 55 PHE 55 163 163 PHE PHE C . n C 2 56 LYS 56 164 164 LYS LYS C . n C 2 57 ILE 57 165 165 ILE ILE C . n C 2 58 HIS 58 166 166 HIS HIS C . n C 2 59 ASN 59 167 167 ASN ASN C . n C 2 60 ALA 60 168 168 ALA ALA C . n C 2 61 VAL 61 169 169 VAL VAL C . n C 2 62 THR 62 170 170 THR THR C . n C 2 63 VAL 63 171 ? ? ? C . n C 2 64 HIS 64 172 ? ? ? C . n C 2 65 MET 65 173 ? ? ? C . n C 2 66 SER 66 174 ? ? ? C . n C 2 67 LYS 67 175 ? ? ? C . n C 2 68 ALA 68 176 ? ? ? C . n C 2 69 SER 69 177 ? ? ? C . n C 2 70 PRO 70 178 ? ? ? C . n C 2 71 PRO 71 179 ? ? ? C . n C 2 72 PHE 72 180 ? ? ? C . n D 2 1 MET 1 109 ? ? ? D . n D 2 2 GLY 2 110 ? ? ? D . n D 2 3 SER 3 111 ? ? ? D . n D 2 4 SER 4 112 ? ? ? D . n D 2 5 HIS 5 113 ? ? ? D . n D 2 6 HIS 6 114 ? ? ? D . n D 2 7 HIS 7 115 ? ? ? D . n D 2 8 HIS 8 116 ? ? ? D . n D 2 9 HIS 9 117 ? ? ? D . n D 2 10 HIS 10 118 ? ? ? D . n D 2 11 SER 11 119 ? ? ? D . n D 2 12 GLN 12 120 ? ? ? D . n D 2 13 ASP 13 121 ? ? ? D . n D 2 14 PRO 14 122 ? ? ? D . n D 2 15 ASP 15 123 123 ASP ASP D . n D 2 16 VAL 16 124 124 VAL VAL D . n D 2 17 GLU 17 125 125 GLU GLU D . n D 2 18 ASP 18 126 126 ASP ASP D . n D 2 19 LEU 19 127 127 LEU LEU D . n D 2 20 PHE 20 128 128 PHE PHE D . n D 2 21 SER 21 129 129 SER SER D . n D 2 22 SER 22 130 130 SER SER D . n D 2 23 LEU 23 131 131 LEU LEU D . n D 2 24 LYS 24 132 132 LYS LYS D . n D 2 25 HIS 25 133 133 HIS HIS D . n D 2 26 ILE 26 134 134 ILE ILE D . n D 2 27 GLN 27 135 135 GLN GLN D . n D 2 28 HIS 28 136 136 HIS HIS D . n D 2 29 THR 29 137 137 THR THR D . n D 2 30 LEU 30 138 138 LEU LEU D . n D 2 31 VAL 31 139 139 VAL VAL D . n D 2 32 ASP 32 140 140 ASP ASP D . n D 2 33 SER 33 141 141 SER SER D . n D 2 34 GLN 34 142 142 GLN GLN D . n D 2 35 SER 35 143 143 SER SER D . n D 2 36 GLN 36 144 144 GLN GLN D . n D 2 37 GLU 37 145 145 GLU GLU D . n D 2 38 ASP 38 146 146 ASP ASP D . n D 2 39 ILE 39 147 147 ILE ILE D . n D 2 40 SER 40 148 148 SER SER D . n D 2 41 LEU 41 149 149 LEU LEU D . n D 2 42 LEU 42 150 150 LEU LEU D . n D 2 43 LEU 43 151 151 LEU LEU D . n D 2 44 GLN 44 152 152 GLN GLN D . n D 2 45 LEU 45 153 153 LEU LEU D . n D 2 46 VAL 46 154 154 VAL VAL D . n D 2 47 GLN 47 155 155 GLN GLN D . n D 2 48 ASN 48 156 156 ASN ASN D . n D 2 49 ARG 49 157 157 ARG ARG D . n D 2 50 ASP 50 158 158 ASP ASP D . n D 2 51 PHE 51 159 159 PHE PHE D . n D 2 52 GLN 52 160 160 GLN GLN D . n D 2 53 ASN 53 161 161 ASN ASN D . n D 2 54 ALA 54 162 162 ALA ALA D . n D 2 55 PHE 55 163 163 PHE PHE D . n D 2 56 LYS 56 164 164 LYS LYS D . n D 2 57 ILE 57 165 165 ILE ILE D . n D 2 58 HIS 58 166 166 HIS HIS D . n D 2 59 ASN 59 167 167 ASN ASN D . n D 2 60 ALA 60 168 168 ALA ALA D . n D 2 61 VAL 61 169 169 VAL VAL D . n D 2 62 THR 62 170 170 THR THR D . n D 2 63 VAL 63 171 ? ? ? D . n D 2 64 HIS 64 172 ? ? ? D . n D 2 65 MET 65 173 ? ? ? D . n D 2 66 SER 66 174 ? ? ? D . n D 2 67 LYS 67 175 ? ? ? D . n D 2 68 ALA 68 176 ? ? ? D . n D 2 69 SER 69 177 ? ? ? D . n D 2 70 PRO 70 178 ? ? ? D . n D 2 71 PRO 71 179 ? ? ? D . n D 2 72 PHE 72 180 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 91 2 HOH HOH A . E 3 HOH 2 92 7 HOH HOH A . E 3 HOH 3 93 10 HOH HOH A . E 3 HOH 4 94 16 HOH HOH A . E 3 HOH 5 95 19 HOH HOH A . E 3 HOH 6 96 22 HOH HOH A . E 3 HOH 7 97 24 HOH HOH A . E 3 HOH 8 98 25 HOH HOH A . E 3 HOH 9 99 32 HOH HOH A . E 3 HOH 10 100 35 HOH HOH A . E 3 HOH 11 101 39 HOH HOH A . E 3 HOH 12 102 40 HOH HOH A . E 3 HOH 13 103 41 HOH HOH A . E 3 HOH 14 104 44 HOH HOH A . E 3 HOH 15 105 46 HOH HOH A . E 3 HOH 16 106 50 HOH HOH A . E 3 HOH 17 107 54 HOH HOH A . E 3 HOH 18 108 55 HOH HOH A . E 3 HOH 19 109 69 HOH HOH A . E 3 HOH 20 110 70 HOH HOH A . E 3 HOH 21 111 74 HOH HOH A . E 3 HOH 22 112 75 HOH HOH A . E 3 HOH 23 113 78 HOH HOH A . E 3 HOH 24 114 80 HOH HOH A . E 3 HOH 25 115 86 HOH HOH A . E 3 HOH 26 116 87 HOH HOH A . E 3 HOH 27 117 89 HOH HOH A . E 3 HOH 28 118 93 HOH HOH A . E 3 HOH 29 119 94 HOH HOH A . E 3 HOH 30 120 95 HOH HOH A . E 3 HOH 31 121 98 HOH HOH A . F 3 HOH 1 91 8 HOH HOH B . F 3 HOH 2 92 9 HOH HOH B . F 3 HOH 3 93 11 HOH HOH B . F 3 HOH 4 94 12 HOH HOH B . F 3 HOH 5 95 13 HOH HOH B . F 3 HOH 6 96 30 HOH HOH B . F 3 HOH 7 97 34 HOH HOH B . F 3 HOH 8 98 38 HOH HOH B . F 3 HOH 9 99 48 HOH HOH B . F 3 HOH 10 100 57 HOH HOH B . F 3 HOH 11 101 59 HOH HOH B . F 3 HOH 12 102 60 HOH HOH B . F 3 HOH 13 103 62 HOH HOH B . F 3 HOH 14 104 66 HOH HOH B . F 3 HOH 15 105 67 HOH HOH B . F 3 HOH 16 106 71 HOH HOH B . F 3 HOH 17 107 83 HOH HOH B . F 3 HOH 18 108 85 HOH HOH B . F 3 HOH 19 109 88 HOH HOH B . F 3 HOH 20 110 90 HOH HOH B . F 3 HOH 21 111 92 HOH HOH B . G 3 HOH 1 3 3 HOH HOH C . G 3 HOH 2 4 4 HOH HOH C . G 3 HOH 3 5 5 HOH HOH C . G 3 HOH 4 6 6 HOH HOH C . G 3 HOH 5 15 15 HOH HOH C . G 3 HOH 6 18 18 HOH HOH C . G 3 HOH 7 20 20 HOH HOH C . G 3 HOH 8 21 21 HOH HOH C . G 3 HOH 9 23 23 HOH HOH C . G 3 HOH 10 26 26 HOH HOH C . G 3 HOH 11 27 27 HOH HOH C . G 3 HOH 12 28 28 HOH HOH C . G 3 HOH 13 29 29 HOH HOH C . G 3 HOH 14 31 31 HOH HOH C . G 3 HOH 15 33 33 HOH HOH C . G 3 HOH 16 36 36 HOH HOH C . G 3 HOH 17 37 37 HOH HOH C . G 3 HOH 18 49 49 HOH HOH C . G 3 HOH 19 52 52 HOH HOH C . G 3 HOH 20 56 56 HOH HOH C . G 3 HOH 21 61 61 HOH HOH C . G 3 HOH 22 64 64 HOH HOH C . G 3 HOH 23 65 65 HOH HOH C . G 3 HOH 24 72 72 HOH HOH C . G 3 HOH 25 76 76 HOH HOH C . G 3 HOH 26 77 77 HOH HOH C . G 3 HOH 27 81 81 HOH HOH C . G 3 HOH 28 82 82 HOH HOH C . G 3 HOH 29 84 84 HOH HOH C . G 3 HOH 30 91 91 HOH HOH C . H 3 HOH 1 1 1 HOH HOH D . H 3 HOH 2 14 14 HOH HOH D . H 3 HOH 3 17 17 HOH HOH D . H 3 HOH 4 42 42 HOH HOH D . H 3 HOH 5 43 43 HOH HOH D . H 3 HOH 6 45 45 HOH HOH D . H 3 HOH 7 47 47 HOH HOH D . H 3 HOH 8 51 51 HOH HOH D . H 3 HOH 9 53 53 HOH HOH D . H 3 HOH 10 58 58 HOH HOH D . H 3 HOH 11 63 63 HOH HOH D . H 3 HOH 12 68 68 HOH HOH D . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 XDS 'data reduction' . ? 2 SOLVE phasing . ? 3 CNS refinement . ? 4 HKL-2000 'data reduction' . ? 5 XDS 'data scaling' . ? 6 # _cell.entry_id 1VF6 _cell.length_a 111.060 _cell.length_b 111.060 _cell.length_c 193.690 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1VF6 _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1VF6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.23 _exptl_crystal.density_percent_sol 61.94 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293.5 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details 'ammonium sulfate, glycerol, CHAPS, sodium citrate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 293.5K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2004-03-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0722 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0722 # _reflns.entry_id 1VF6 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3.0 _reflns.d_resolution_high 2.1 _reflns.d_resolution_low 50 _reflns.number_all 25593 _reflns.number_obs 25593 _reflns.percent_possible_obs 94.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.1 _reflns_shell.d_res_low 2.2 _reflns_shell.percent_possible_all 99.1 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1VF6 _refine.ls_d_res_high 2.1 _refine.ls_d_res_low 20 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 24357 _refine.ls_number_reflns_obs 24357 _refine.ls_number_reflns_R_free 1236 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.242 _refine.ls_R_factor_R_work 0.242 _refine.ls_R_factor_R_free 0.262 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1VF6 _refine_analyze.Luzzati_coordinate_error_obs 0.29 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1773 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 94 _refine_hist.number_atoms_total 1867 _refine_hist.d_res_high 2.1 _refine_hist.d_res_low 20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.0057 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 0.9184 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.10 _refine_ls_shell.d_res_low 2.13 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.335 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.338 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1VF6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1VF6 _struct.title '2.1 Angstrom crystal structure of the PALS-1-L27N and PATJ L27 heterodimer complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1VF6 _struct_keywords.pdbx_keywords 'PROTEIN BINDING/PROTEIN TRANSPORT' _struct_keywords.text ;L27 domain, heterodimer, four-helical bundle, coiled-coil, hydrophobic packing interactions, PROTEIN BINDING-PROTEIN TRANSPORT COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP INADL_HUMAN 1 ? 9 Q8NI35 ? 2 UNP MPP5_MOUSE 2 DVEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNRDFQNAFKIHNAVTVHMSKASPPF 123 Q9JLB2 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1VF6 A 2 ? 60 ? Q8NI35 9 ? 67 ? 9 67 2 1 1VF6 B 2 ? 60 ? Q8NI35 9 ? 67 ? 9 67 3 2 1VF6 C 15 ? 72 ? Q9JLB2 123 ? 180 ? 123 180 4 2 1VF6 D 15 ? 72 ? Q9JLB2 123 ? 180 ? 123 180 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1VF6 MET A 1 ? UNP Q8NI35 ? ? 'initiating methionine' 8 1 2 1VF6 MET B 1 ? UNP Q8NI35 ? ? 'initiating methionine' 8 2 3 1VF6 MET C 1 ? UNP Q9JLB2 ? ? 'expression tag' 109 3 3 1VF6 GLY C 2 ? UNP Q9JLB2 ? ? 'expression tag' 110 4 3 1VF6 SER C 3 ? UNP Q9JLB2 ? ? 'expression tag' 111 5 3 1VF6 SER C 4 ? UNP Q9JLB2 ? ? 'expression tag' 112 6 3 1VF6 HIS C 5 ? UNP Q9JLB2 ? ? 'expression tag' 113 7 3 1VF6 HIS C 6 ? UNP Q9JLB2 ? ? 'expression tag' 114 8 3 1VF6 HIS C 7 ? UNP Q9JLB2 ? ? 'expression tag' 115 9 3 1VF6 HIS C 8 ? UNP Q9JLB2 ? ? 'expression tag' 116 10 3 1VF6 HIS C 9 ? UNP Q9JLB2 ? ? 'expression tag' 117 11 3 1VF6 HIS C 10 ? UNP Q9JLB2 ? ? 'expression tag' 118 12 3 1VF6 SER C 11 ? UNP Q9JLB2 ? ? 'expression tag' 119 13 3 1VF6 GLN C 12 ? UNP Q9JLB2 ? ? 'expression tag' 120 14 3 1VF6 ASP C 13 ? UNP Q9JLB2 ? ? 'expression tag' 121 15 3 1VF6 PRO C 14 ? UNP Q9JLB2 ? ? 'expression tag' 122 16 4 1VF6 MET D 1 ? UNP Q9JLB2 ? ? 'expression tag' 109 17 4 1VF6 GLY D 2 ? UNP Q9JLB2 ? ? 'expression tag' 110 18 4 1VF6 SER D 3 ? UNP Q9JLB2 ? ? 'expression tag' 111 19 4 1VF6 SER D 4 ? UNP Q9JLB2 ? ? 'expression tag' 112 20 4 1VF6 HIS D 5 ? UNP Q9JLB2 ? ? 'expression tag' 113 21 4 1VF6 HIS D 6 ? UNP Q9JLB2 ? ? 'expression tag' 114 22 4 1VF6 HIS D 7 ? UNP Q9JLB2 ? ? 'expression tag' 115 23 4 1VF6 HIS D 8 ? UNP Q9JLB2 ? ? 'expression tag' 116 24 4 1VF6 HIS D 9 ? UNP Q9JLB2 ? ? 'expression tag' 117 25 4 1VF6 HIS D 10 ? UNP Q9JLB2 ? ? 'expression tag' 118 26 4 1VF6 SER D 11 ? UNP Q9JLB2 ? ? 'expression tag' 119 27 4 1VF6 GLN D 12 ? UNP Q9JLB2 ? ? 'expression tag' 120 28 4 1VF6 ASP D 13 ? UNP Q9JLB2 ? ? 'expression tag' 121 29 4 1VF6 PRO D 14 ? UNP Q9JLB2 ? ? 'expression tag' 122 30 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 3 software_defined_assembly PISA octameric 8 4 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2080 ? 1 MORE -17 ? 1 'SSA (A^2)' 7120 ? 2 'ABSA (A^2)' 2150 ? 2 MORE -21 ? 2 'SSA (A^2)' 7000 ? 3 'ABSA (A^2)' 14270 ? 3 MORE -130 ? 3 'SSA (A^2)' 22420 ? 4 'ABSA (A^2)' 5790 ? 4 MORE -58 ? 4 'SSA (A^2)' 12550 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,G 2 1 B,D,F,H 3 1,2 A,B,C,D,E,F,G,H 4 1 A,B,C,D,E,F,G,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 x-y,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 VAL A 5 ? GLY A 20 ? VAL A 12 GLY A 27 1 ? 16 HELX_P HELX_P2 2 GLN A 24 ? SER A 37 ? GLN A 31 SER A 44 1 ? 14 HELX_P HELX_P3 3 SER A 37 ? LEU A 61 ? SER A 44 LEU A 68 1 ? 25 HELX_P HELX_P4 4 LEU B 3 ? LYS B 19 ? LEU B 10 LYS B 26 1 ? 17 HELX_P HELX_P5 5 GLN B 24 ? SER B 37 ? GLN B 31 SER B 44 1 ? 14 HELX_P HELX_P6 6 SER B 37 ? LEU B 61 ? SER B 44 LEU B 68 1 ? 25 HELX_P HELX_P7 7 ASP C 13 ? HIS C 28 ? ASP C 121 HIS C 136 1 ? 16 HELX_P HELX_P8 8 ASP C 32 ? ASN C 48 ? ASP C 140 ASN C 156 1 ? 17 HELX_P HELX_P9 9 ASN C 48 ? THR C 62 ? ASN C 156 THR C 170 1 ? 15 HELX_P HELX_P10 10 ASP D 15 ? LEU D 30 ? ASP D 123 LEU D 138 1 ? 16 HELX_P HELX_P11 11 ASP D 32 ? ASN D 48 ? ASP D 140 ASN D 156 1 ? 17 HELX_P HELX_P12 12 ASN D 48 ? THR D 62 ? ASN D 156 THR D 170 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 8 ? A MET 1 2 1 Y 1 A LYS 9 ? A LYS 2 3 1 Y 1 A LEU 10 ? A LEU 3 4 1 Y 1 A GLN 11 ? A GLN 4 5 1 Y 1 A SER 70 ? A SER 63 6 1 Y 1 A GLY 71 ? A GLY 64 7 1 Y 1 A LYS 72 ? A LYS 65 8 1 Y 1 A GLU 73 ? A GLU 66 9 1 Y 1 A THR 74 ? A THR 67 10 1 Y 1 A ALA 75 ? A ALA 68 11 1 Y 1 A ALA 76 ? A ALA 69 12 1 Y 1 A ALA 77 ? A ALA 70 13 1 Y 1 A LYS 78 ? A LYS 71 14 1 Y 1 A PHE 79 ? A PHE 72 15 1 Y 1 A GLU 80 ? A GLU 73 16 1 Y 1 A ARG 81 ? A ARG 74 17 1 Y 1 A GLN 82 ? A GLN 75 18 1 Y 1 A HIS 83 ? A HIS 76 19 1 Y 1 A MET 84 ? A MET 77 20 1 Y 1 A ASP 85 ? A ASP 78 21 1 Y 1 A SER 86 ? A SER 79 22 1 Y 1 A SER 87 ? A SER 80 23 1 Y 1 A THR 88 ? A THR 81 24 1 Y 1 A SER 89 ? A SER 82 25 1 Y 1 A ALA 90 ? A ALA 83 26 1 Y 1 B MET 8 ? B MET 1 27 1 Y 1 B LYS 9 ? B LYS 2 28 1 Y 1 B SER 70 ? B SER 63 29 1 Y 1 B GLY 71 ? B GLY 64 30 1 Y 1 B LYS 72 ? B LYS 65 31 1 Y 1 B GLU 73 ? B GLU 66 32 1 Y 1 B THR 74 ? B THR 67 33 1 Y 1 B ALA 75 ? B ALA 68 34 1 Y 1 B ALA 76 ? B ALA 69 35 1 Y 1 B ALA 77 ? B ALA 70 36 1 Y 1 B LYS 78 ? B LYS 71 37 1 Y 1 B PHE 79 ? B PHE 72 38 1 Y 1 B GLU 80 ? B GLU 73 39 1 Y 1 B ARG 81 ? B ARG 74 40 1 Y 1 B GLN 82 ? B GLN 75 41 1 Y 1 B HIS 83 ? B HIS 76 42 1 Y 1 B MET 84 ? B MET 77 43 1 Y 1 B ASP 85 ? B ASP 78 44 1 Y 1 B SER 86 ? B SER 79 45 1 Y 1 B SER 87 ? B SER 80 46 1 Y 1 B THR 88 ? B THR 81 47 1 Y 1 B SER 89 ? B SER 82 48 1 Y 1 B ALA 90 ? B ALA 83 49 1 Y 1 C MET 109 ? C MET 1 50 1 Y 1 C GLY 110 ? C GLY 2 51 1 Y 1 C SER 111 ? C SER 3 52 1 Y 1 C SER 112 ? C SER 4 53 1 Y 1 C HIS 113 ? C HIS 5 54 1 Y 1 C HIS 114 ? C HIS 6 55 1 Y 1 C HIS 115 ? C HIS 7 56 1 Y 1 C HIS 116 ? C HIS 8 57 1 Y 1 C HIS 117 ? C HIS 9 58 1 Y 1 C HIS 118 ? C HIS 10 59 1 Y 1 C SER 119 ? C SER 11 60 1 Y 1 C VAL 171 ? C VAL 63 61 1 Y 1 C HIS 172 ? C HIS 64 62 1 Y 1 C MET 173 ? C MET 65 63 1 Y 1 C SER 174 ? C SER 66 64 1 Y 1 C LYS 175 ? C LYS 67 65 1 Y 1 C ALA 176 ? C ALA 68 66 1 Y 1 C SER 177 ? C SER 69 67 1 Y 1 C PRO 178 ? C PRO 70 68 1 Y 1 C PRO 179 ? C PRO 71 69 1 Y 1 C PHE 180 ? C PHE 72 70 1 Y 1 D MET 109 ? D MET 1 71 1 Y 1 D GLY 110 ? D GLY 2 72 1 Y 1 D SER 111 ? D SER 3 73 1 Y 1 D SER 112 ? D SER 4 74 1 Y 1 D HIS 113 ? D HIS 5 75 1 Y 1 D HIS 114 ? D HIS 6 76 1 Y 1 D HIS 115 ? D HIS 7 77 1 Y 1 D HIS 116 ? D HIS 8 78 1 Y 1 D HIS 117 ? D HIS 9 79 1 Y 1 D HIS 118 ? D HIS 10 80 1 Y 1 D SER 119 ? D SER 11 81 1 Y 1 D GLN 120 ? D GLN 12 82 1 Y 1 D ASP 121 ? D ASP 13 83 1 Y 1 D PRO 122 ? D PRO 14 84 1 Y 1 D VAL 171 ? D VAL 63 85 1 Y 1 D HIS 172 ? D HIS 64 86 1 Y 1 D MET 173 ? D MET 65 87 1 Y 1 D SER 174 ? D SER 66 88 1 Y 1 D LYS 175 ? D LYS 67 89 1 Y 1 D ALA 176 ? D ALA 68 90 1 Y 1 D SER 177 ? D SER 69 91 1 Y 1 D PRO 178 ? D PRO 70 92 1 Y 1 D PRO 179 ? D PRO 71 93 1 Y 1 D PHE 180 ? D PHE 72 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TYR N N N N 307 TYR CA C N S 308 TYR C C N N 309 TYR O O N N 310 TYR CB C N N 311 TYR CG C Y N 312 TYR CD1 C Y N 313 TYR CD2 C Y N 314 TYR CE1 C Y N 315 TYR CE2 C Y N 316 TYR CZ C Y N 317 TYR OH O N N 318 TYR OXT O N N 319 TYR H H N N 320 TYR H2 H N N 321 TYR HA H N N 322 TYR HB2 H N N 323 TYR HB3 H N N 324 TYR HD1 H N N 325 TYR HD2 H N N 326 TYR HE1 H N N 327 TYR HE2 H N N 328 TYR HH H N N 329 TYR HXT H N N 330 VAL N N N N 331 VAL CA C N S 332 VAL C C N N 333 VAL O O N N 334 VAL CB C N N 335 VAL CG1 C N N 336 VAL CG2 C N N 337 VAL OXT O N N 338 VAL H H N N 339 VAL H2 H N N 340 VAL HA H N N 341 VAL HB H N N 342 VAL HG11 H N N 343 VAL HG12 H N N 344 VAL HG13 H N N 345 VAL HG21 H N N 346 VAL HG22 H N N 347 VAL HG23 H N N 348 VAL HXT H N N 349 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TYR N CA sing N N 293 TYR N H sing N N 294 TYR N H2 sing N N 295 TYR CA C sing N N 296 TYR CA CB sing N N 297 TYR CA HA sing N N 298 TYR C O doub N N 299 TYR C OXT sing N N 300 TYR CB CG sing N N 301 TYR CB HB2 sing N N 302 TYR CB HB3 sing N N 303 TYR CG CD1 doub Y N 304 TYR CG CD2 sing Y N 305 TYR CD1 CE1 sing Y N 306 TYR CD1 HD1 sing N N 307 TYR CD2 CE2 doub Y N 308 TYR CD2 HD2 sing N N 309 TYR CE1 CZ doub Y N 310 TYR CE1 HE1 sing N N 311 TYR CE2 CZ sing Y N 312 TYR CE2 HE2 sing N N 313 TYR CZ OH sing N N 314 TYR OH HH sing N N 315 TYR OXT HXT sing N N 316 VAL N CA sing N N 317 VAL N H sing N N 318 VAL N H2 sing N N 319 VAL CA C sing N N 320 VAL CA CB sing N N 321 VAL CA HA sing N N 322 VAL C O doub N N 323 VAL C OXT sing N N 324 VAL CB CG1 sing N N 325 VAL CB CG2 sing N N 326 VAL CB HB sing N N 327 VAL CG1 HG11 sing N N 328 VAL CG1 HG12 sing N N 329 VAL CG1 HG13 sing N N 330 VAL CG2 HG21 sing N N 331 VAL CG2 HG22 sing N N 332 VAL CG2 HG23 sing N N 333 VAL OXT HXT sing N N 334 # _atom_sites.entry_id 1VF6 _atom_sites.fract_transf_matrix[1][1] 0.009004 _atom_sites.fract_transf_matrix[1][2] 0.005199 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010397 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005163 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_