HEADER TRANSFERASE 23-APR-04 1VG2 TITLE CRYSTAL STRUCTURE OF OCTAPRENYL PYROPHOSPHATE SYNTHASE FROM TITLE 2 HYPERTHERMOPHILIC THERMOTOGA MARITIMA A76Y MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: OCTOPRENYL-DIPHOSPHATE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TRANS-OCTAPRENYLTRANSTRANSFERASE; COMPND 5 EC: 2.5.1.11; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET32XA-LIC KEYWDS TRANS-TYPE PRENYLTRANSFERASE, THERMOPHILIC, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.T.GUO,C.J.KUO,T.P.KO,C.C.CHOU,P.H.LIANG,A.H.-J.WANG REVDAT 6 25-OCT-23 1VG2 1 REMARK REVDAT 5 10-NOV-21 1VG2 1 SEQADV ATOM REVDAT 4 13-JUL-11 1VG2 1 VERSN REVDAT 3 24-FEB-09 1VG2 1 VERSN REVDAT 2 15-MAR-05 1VG2 1 JRNL REVDAT 1 18-MAY-04 1VG2 0 JRNL AUTH R.T.GUO,C.J.KUO,T.P.KO,C.C.CHOU,P.H.LIANG,A.H.-J.WANG JRNL TITL A MOLECULAR RULER FOR CHAIN ELONGATION CATALYZED BY JRNL TITL 2 OCTAPRENYL PYROPHOSPHATE SYNTHASE AND ITS STRUCTURE-BASED JRNL TITL 3 ENGINEERING TO PRODUCE UNPRECEDENTED LONG CHAIN TRANS-PRENYL JRNL TITL 4 PRODUCTS JRNL REF BIOCHEMISTRY V. 43 7678 2004 JRNL REFN ISSN 0006-2960 JRNL PMID 15196010 JRNL DOI 10.1021/BI036336D REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.87 REMARK 3 DATA CUTOFF (SIGMA(F)) : 4.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 86.8 REMARK 3 NUMBER OF REFLECTIONS : 6180 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.244 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 343 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.21 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 65.17 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3126 REMARK 3 BIN FREE R VALUE : 0.3252 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 25 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2233 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 258 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.37 REMARK 3 ESD FROM SIGMAA (A) : 0.44 REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.003 REMARK 3 BOND ANGLES (DEGREES) : 0.810 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1VG2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-APR-04. REMARK 100 THE DEPOSITION ID IS D_1000006576. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUL-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7104 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 10.00 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 34.8900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.53800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.950 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1V4E REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES, LITHIUM SULFATE, PEG 900, PH REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 75.69600 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 75.69600 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 32.43450 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 75.69600 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 75.69600 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 32.43450 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 75.69600 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 75.69600 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 32.43450 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 75.69600 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 75.69600 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 32.43450 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 75.69600 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 75.69600 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 32.43450 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 75.69600 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 75.69600 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 32.43450 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 75.69600 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 75.69600 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 32.43450 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 75.69600 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 75.69600 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 32.43450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 129.73800 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 129.73800 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 129.73800 REMARK 350 BIOMT1 6 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 129.73800 REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 129.73800 REMARK 350 BIOMT1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 129.73800 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 LYS A 3 REMARK 465 ASN A 4 REMARK 465 LYS A 5 REMARK 465 LEU A 6 REMARK 465 ASN A 7 REMARK 465 PHE A 288 REMARK 465 VAL A 289 REMARK 465 ASP A 290 REMARK 465 GLY A 291 REMARK 465 ILE A 292 REMARK 465 PHE A 293 REMARK 465 LYS A 294 REMARK 465 ILE A 295 REMARK 465 LYS A 296 REMARK 465 ILE A 297 REMARK 465 SER A 298 REMARK 465 SER A 299 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 530 O HOH A 531 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CB SER A 10 CB SER A 10 15457 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 10 -84.77 -54.83 REMARK 500 TYR A 11 -83.97 -25.67 REMARK 500 PRO A 37 57.15 -67.21 REMARK 500 TYR A 39 178.77 65.81 REMARK 500 ARG A 90 77.24 -102.95 REMARK 500 SER A 149 35.40 -96.26 REMARK 500 GLU A 213 -71.92 -86.88 REMARK 500 ASP A 222 68.08 -66.95 REMARK 500 TRP A 284 11.88 -63.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1V4E RELATED DB: PDB REMARK 900 THE SAME PROTEIN (WILD-TYPE) REMARK 900 RELATED ID: 1V4H RELATED DB: PDB REMARK 900 THE SAME PROTEIN (F52A MUTANT) REMARK 900 RELATED ID: 1V4J RELATED DB: PDB REMARK 900 THE SAME PROTEIN (V73Y MUTANT) REMARK 900 RELATED ID: 1V4K RELATED DB: PDB REMARK 900 THE SAME PROTEIN (S77F MUTANT) REMARK 900 RELATED ID: 1V4I RELATED DB: PDB REMARK 900 THE SAME PROTEIN (F132A MUTANT) REMARK 900 RELATED ID: 1VG3 RELATED DB: PDB REMARK 900 THE SAME PROTEIN (A76Y/S77F MUTANT) REMARK 900 RELATED ID: 1VG4 RELATED DB: PDB REMARK 900 THE SAME PROTEIN (F132A/L128A MUTANT) REMARK 900 RELATED ID: 1VG6 RELATED DB: PDB REMARK 900 THE SAME PROTEIN (F132A/L128A/I123A MUTANT) REMARK 900 RELATED ID: 1VG7 RELATED DB: PDB REMARK 900 THE SAME PROTEIN (F132A/L128A/I123A/D62A MUTANT) DBREF 1VG2 A 1 299 UNP Q9X1M1 Q9X1M1_THEMA 1 299 SEQADV 1VG2 TYR A 76 UNP Q9X1M1 ALA 76 ENGINEERED MUTATION SEQRES 1 A 299 MET THR LYS ASN LYS LEU ASN GLN ASN SER TYR GLU LEU SEQRES 2 A 299 GLU LYS VAL LYS GLU ARG ILE GLU GLN ILE LEU SER GLN SEQRES 3 A 299 PHE PHE PRO GLU GLN ILE MET LYS ASP LEU PRO LEU TYR SEQRES 4 A 299 GLY LYS MET LEU ARG VAL ARG LEU SER ILE LEU SER PHE SEQRES 5 A 299 LYS ASN ARG GLY VAL GLU ILE GLY GLU ASP ALA ILE SER SEQRES 6 A 299 SER LEU ALA ALA LEU GLU LEU VAL HIS LEU TYR SER LEU SEQRES 7 A 299 LEU HIS ASP ASP VAL ILE ASP GLY ALA ARG PHE ARG ARG SEQRES 8 A 299 GLY LYS GLU THR ILE ASN PHE MET TYR GLY ASP LYS ALA SEQRES 9 A 299 ALA VAL ALA ALA GLY ASP LEU VAL LEU VAL SER ALA PHE SEQRES 10 A 299 HIS THR VAL GLU GLU ILE GLY ASN ASN LYS LEU ARG ARG SEQRES 11 A 299 ALA PHE LEU ASN VAL ILE GLY LYS MET SER GLU ALA GLU SEQRES 12 A 299 LEU ILE GLU GLN LEU SER ARG TYR LYS PRO ILE THR LYS SEQRES 13 A 299 GLU GLU TYR LEU ARG ILE VAL GLU GLY LYS SER GLY ALA SEQRES 14 A 299 LEU PHE GLY LEU ALA LEU GLN LEU PRO ALA LEU LEU GLU SEQRES 15 A 299 GLY GLU LEU GLY GLU ASP LEU TYR ASN LEU GLY VAL THR SEQRES 16 A 299 ILE GLY THR ILE TYR GLN MET PHE ASP ASP ILE MET ASP SEQRES 17 A 299 PHE ALA GLY MET GLU LYS ILE GLY LYS ASP GLY PHE LEU SEQRES 18 A 299 ASP LEU LYS ASN GLY VAL ALA SER PHE PRO LEU VAL THR SEQRES 19 A 299 ALA MET GLU LYS PHE PRO GLU ALA ARG GLN MET PHE GLU SEQRES 20 A 299 ASN ARG ASP TRP SER GLY LEU MET SER PHE MET ARG GLU SEQRES 21 A 299 LYS GLY ILE LEU LYS GLU CYS GLU GLU THR LEU LYS VAL SEQRES 22 A 299 LEU VAL LYS ASN VAL ILE ILE GLU ASN SER TRP LEU ARG SEQRES 23 A 299 ASP PHE VAL ASP GLY ILE PHE LYS ILE LYS ILE SER SER FORMUL 2 HOH *258(H2 O) HELIX 1 1 ASN A 9 PHE A 28 1 20 HELIX 2 2 PRO A 29 LYS A 34 1 6 HELIX 3 3 MET A 42 GLY A 56 1 15 HELIX 4 4 GLY A 60 GLY A 86 1 27 HELIX 5 5 THR A 95 TYR A 100 1 6 HELIX 6 6 GLY A 101 GLY A 124 1 24 HELIX 7 7 ASN A 125 SER A 149 1 25 HELIX 8 8 THR A 155 SER A 167 1 13 HELIX 9 9 SER A 167 GLY A 183 1 17 HELIX 10 10 GLY A 186 GLY A 211 1 26 HELIX 11 11 SER A 229 PHE A 239 1 11 HELIX 12 12 PHE A 239 ASN A 248 1 10 HELIX 13 13 ASP A 250 LYS A 261 1 12 HELIX 14 14 GLY A 262 GLU A 281 1 20 HELIX 15 15 ASN A 282 ARG A 286 5 5 CRYST1 151.392 151.392 64.869 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006605 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006605 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015416 0.00000