HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 03-NOV-03 1VGY TITLE CRYSTAL STRUCTURE OF SUCCINYL DIAMINOPIMELATE DESUCCINYLASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUCCINYL-DIAMINOPIMELATE DESUCCINYLASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEISSERIA MENINGITIDIS; SOURCE 3 ORGANISM_TAXID: 122586; SOURCE 4 STRAIN: MC58; SOURCE 5 GENE: DAPE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR STRUCTURAL GENOMIX REVDAT 9 13-NOV-24 1VGY 1 REMARK REVDAT 8 27-DEC-23 1VGY 1 REMARK REVDAT 7 27-OCT-21 1VGY 1 SEQADV LINK REVDAT 6 04-OCT-17 1VGY 1 REMARK REVDAT 5 13-JUL-11 1VGY 1 VERSN REVDAT 4 24-FEB-09 1VGY 1 VERSN REVDAT 3 30-AUG-05 1VGY 1 JRNL REVDAT 2 30-DEC-03 1VGY 1 JRNL REVDAT 1 25-NOV-03 1VGY 0 JRNL AUTH J.BADGER,J.M.SAUDER,J.M.ADAMS,S.ANTONYSAMY,K.BAIN, JRNL AUTH 2 M.G.BERGSEID,S.G.BUCHANAN,M.D.BUCHANAN,Y.BATIYENKO, JRNL AUTH 3 J.A.CHRISTOPHER,S.EMTAGE,A.EROSHKINA,I.FEIL,E.B.FURLONG, JRNL AUTH 4 K.S.GAJIWALA,X.GAO,D.HE,J.HENDLE,A.HUBER,K.HODA,P.KEARINS, JRNL AUTH 5 C.KISSINGER,B.LAUBERT,H.A.LEWIS,J.LIN,K.LOOMIS,D.LORIMER, JRNL AUTH 6 G.LOUIE,M.MALETIC,C.D.MARSH,I.MILLER,J.MOLINARI, JRNL AUTH 7 H.J.MULLER-DIECKMANN,J.M.NEWMAN,B.W.NOLAND,B.PAGARIGAN, JRNL AUTH 8 F.PARK,T.S.PEAT,K.W.POST,S.RADOJICIC,A.RAMOS,R.ROMERO, JRNL AUTH 9 M.E.RUTTER,W.E.SANDERSON,K.D.SCHWINN,J.TRESSER,J.WINHOVEN, JRNL AUTH10 T.A.WRIGHT,L.WU,J.XU,T.J.HARRIS JRNL TITL STRUCTURAL ANALYSIS OF A SET OF PROTEINS RESULTING FROM A JRNL TITL 2 BACTERIAL GENOMICS PROJECT JRNL REF PROTEINS V. 60 787 2005 JRNL REFN ISSN 0887-3585 JRNL PMID 16021622 JRNL DOI 10.1002/PROT.20541 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 4.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 71896 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3597 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5706 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 752 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.05900 REMARK 3 B22 (A**2) : 0.49900 REMARK 3 B33 (A**2) : -0.66200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.23000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.014 ; NULL REMARK 3 ANGLE DISTANCE (A) : 2.364 ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.013 ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.152 ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : 2.519 ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.711 ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.696 ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : 3.047 ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.268 ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1VGY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-NOV-03. REMARK 100 THE DEPOSITION ID IS D_1000001857. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 32-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM, TRUNCATE REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA, TRUNCATE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81454 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.790 REMARK 200 RESOLUTION RANGE LOW (A) : 39.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 8.600 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 0.02167 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SE-MET SAD PHASING REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.25000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -1 REMARK 465 SER A 0 REMARK 465 LEU A 1 REMARK 465 ALA A 377 REMARK 465 GLY A 378 REMARK 465 ASN A 379 REMARK 465 ALA A 380 REMARK 465 VAL A 381 REMARK 465 GLU A 382 REMARK 465 GLY A 383 REMARK 465 GLY A 384 REMARK 465 SER A 385 REMARK 465 HIS A 386 REMARK 465 HIS A 387 REMARK 465 HIS A 388 REMARK 465 HIS A 389 REMARK 465 HIS A 390 REMARK 465 HIS A 391 REMARK 465 MSE B -1 REMARK 465 SER B 0 REMARK 465 LEU B 1 REMARK 465 ALA B 377 REMARK 465 GLY B 378 REMARK 465 ASN B 379 REMARK 465 ALA B 380 REMARK 465 VAL B 381 REMARK 465 GLU B 382 REMARK 465 GLY B 383 REMARK 465 GLY B 384 REMARK 465 SER B 385 REMARK 465 HIS B 386 REMARK 465 HIS B 387 REMARK 465 HIS B 388 REMARK 465 HIS B 389 REMARK 465 HIS B 390 REMARK 465 HIS B 391 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 2 OG1 CG2 REMARK 470 GLU A 12 CG CD OE1 OE2 REMARK 470 LYS A 36 CD CE NZ REMARK 470 LYS A 59 NZ REMARK 470 LYS A 190 CD CE NZ REMARK 470 THR B 2 OG1 CG2 REMARK 470 GLN B 5 CD OE1 NE2 REMARK 470 GLU B 12 CG CD OE1 OE2 REMARK 470 LYS B 36 CD CE NZ REMARK 470 LYS B 59 NZ REMARK 470 ASP B 154 CG OD1 OD2 REMARK 470 LYS B 190 CG CD CE NZ REMARK 470 GLU B 317 CD OE1 OE2 REMARK 470 GLU B 319 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 33 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 90 CD - NE - CZ ANGL. DEV. = 20.4 DEGREES REMARK 500 ARG A 90 NE - CZ - NH1 ANGL. DEV. = -4.8 DEGREES REMARK 500 ARG A 90 NE - CZ - NH2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG A 115 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG A 179 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 180 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG A 180 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ASP A 278 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG B 33 CD - NE - CZ ANGL. DEV. = 9.2 DEGREES REMARK 500 ARG B 55 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 90 CD - NE - CZ ANGL. DEV. = 42.9 DEGREES REMARK 500 ARG B 90 NE - CZ - NH2 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG B 97 CD - NE - CZ ANGL. DEV. = 10.8 DEGREES REMARK 500 ARG B 115 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG B 180 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 20 132.45 -37.99 REMARK 500 MSE A 102 35.56 -151.76 REMARK 500 ASP A 169 -79.11 -143.68 REMARK 500 ASN A 225 -159.82 -159.13 REMARK 500 PRO B 87 118.04 -35.45 REMARK 500 MSE B 102 34.72 -150.76 REMARK 500 ASP B 169 -80.38 -141.28 REMARK 500 ASN B 225 -163.02 -163.18 REMARK 500 SER B 327 -168.97 -160.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 HIS A 45 11.75 REMARK 500 REMARK 500 REMARK: NULL DBREF 1VGY A 2 381 UNP Q9JYL2 Q9JYL2_NEIMB 2 381 DBREF 1VGY B 2 381 UNP Q9JYL2 Q9JYL2_NEIMB 2 381 SEQADV 1VGY MSE A -1 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY SER A 0 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY LEU A 1 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY MSE A 30 UNP Q9JYL2 LEU 30 ENGINEERED MUTATION SEQADV 1VGY MSE A 44 UNP Q9JYL2 LEU 44 ENGINEERED MUTATION SEQADV 1VGY ASN A 48 UNP Q9JYL2 ASP 48 VARIANT SEQADV 1VGY MSE A 102 UNP Q9JYL2 MET 102 MODIFIED RESIDUE SEQADV 1VGY MSE A 174 UNP Q9JYL2 MET 174 MODIFIED RESIDUE SEQADV 1VGY MSE A 335 UNP Q9JYL2 ILE 335 ENGINEERED MUTATION SEQADV 1VGY VAL A 373 UNP Q9JYL2 ALA 373 VARIANT SEQADV 1VGY GLU A 382 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY GLY A 383 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY GLY A 384 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY SER A 385 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY HIS A 386 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY HIS A 387 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY HIS A 388 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY HIS A 389 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY HIS A 390 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY HIS A 391 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY MSE B -1 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY SER B 0 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY LEU B 1 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY MSE B 30 UNP Q9JYL2 LEU 30 ENGINEERED MUTATION SEQADV 1VGY MSE B 44 UNP Q9JYL2 LEU 44 ENGINEERED MUTATION SEQADV 1VGY ASN B 48 UNP Q9JYL2 ASP 48 VARIANT SEQADV 1VGY MSE B 102 UNP Q9JYL2 MET 102 MODIFIED RESIDUE SEQADV 1VGY MSE B 174 UNP Q9JYL2 MET 174 MODIFIED RESIDUE SEQADV 1VGY MSE B 335 UNP Q9JYL2 ILE 335 ENGINEERED MUTATION SEQADV 1VGY VAL B 373 UNP Q9JYL2 ALA 373 VARIANT SEQADV 1VGY GLU B 382 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY GLY B 383 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY GLY B 384 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY SER B 385 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY HIS B 386 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY HIS B 387 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY HIS B 388 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY HIS B 389 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY HIS B 390 UNP Q9JYL2 CLONING ARTIFACT SEQADV 1VGY HIS B 391 UNP Q9JYL2 CLONING ARTIFACT SEQRES 1 A 393 MSE SER LEU THR GLU THR GLN SER LEU GLU LEU ALA LYS SEQRES 2 A 393 GLU LEU ILE SER ARG PRO SER VAL THR PRO ASP ASP ARG SEQRES 3 A 393 ASP CYS GLN LYS LEU MSE ALA GLU ARG LEU HIS LYS ILE SEQRES 4 A 393 GLY PHE ALA ALA GLU GLU MSE HIS PHE GLY ASN THR LYS SEQRES 5 A 393 ASN ILE TRP LEU ARG ARG GLY THR LYS ALA PRO VAL VAL SEQRES 6 A 393 CYS PHE ALA GLY HIS THR ASP VAL VAL PRO THR GLY PRO SEQRES 7 A 393 VAL GLU LYS TRP ASP SER PRO PRO PHE GLU PRO ALA GLU SEQRES 8 A 393 ARG ASP GLY ARG LEU TYR GLY ARG GLY ALA ALA ASP MSE SEQRES 9 A 393 LYS THR SER ILE ALA CYS PHE VAL THR ALA CYS GLU ARG SEQRES 10 A 393 PHE VAL ALA LYS HIS PRO ASN HIS GLN GLY SER ILE ALA SEQRES 11 A 393 LEU LEU ILE THR SER ASP GLU GLU GLY ASP ALA LEU ASP SEQRES 12 A 393 GLY THR THR LYS VAL VAL ASP VAL LEU LYS ALA ARG ASP SEQRES 13 A 393 GLU LEU ILE ASP TYR CYS ILE VAL GLY GLU PRO THR ALA SEQRES 14 A 393 VAL ASP LYS LEU GLY ASP MSE ILE LYS ASN GLY ARG ARG SEQRES 15 A 393 GLY SER LEU SER GLY ASN LEU THR VAL LYS GLY LYS GLN SEQRES 16 A 393 GLY HIS ILE ALA TYR PRO HIS LEU ALA ILE ASN PRO VAL SEQRES 17 A 393 HIS THR PHE ALA PRO ALA LEU LEU GLU LEU THR GLN GLU SEQRES 18 A 393 VAL TRP ASP GLU GLY ASN GLU TYR PHE PRO PRO THR SER SEQRES 19 A 393 PHE GLN ILE SER ASN ILE ASN GLY GLY THR GLY ALA THR SEQRES 20 A 393 ASN VAL ILE PRO GLY GLU LEU ASN VAL LYS PHE ASN PHE SEQRES 21 A 393 ARG PHE SER THR GLU SER THR GLU ALA GLY LEU LYS GLN SEQRES 22 A 393 ARG VAL HIS ALA ILE LEU ASP LYS HIS GLY VAL GLN TYR SEQRES 23 A 393 ASP LEU GLN TRP SER CYS SER GLY GLN PRO PHE LEU THR SEQRES 24 A 393 GLN ALA GLY LYS LEU THR ASP VAL ALA ARG ALA ALA ILE SEQRES 25 A 393 ALA GLU THR CYS GLY ILE GLU ALA GLU LEU SER THR THR SEQRES 26 A 393 GLY GLY THR SER ASP GLY ARG PHE ILE LYS ALA MSE ALA SEQRES 27 A 393 GLN GLU LEU ILE GLU LEU GLY PRO SER ASN ALA THR ILE SEQRES 28 A 393 HIS GLN ILE ASN GLU ASN VAL ARG LEU ASN ASP ILE PRO SEQRES 29 A 393 LYS LEU SER ALA VAL TYR GLU GLY ILE LEU VAL ARG LEU SEQRES 30 A 393 LEU ALA GLY ASN ALA VAL GLU GLY GLY SER HIS HIS HIS SEQRES 31 A 393 HIS HIS HIS SEQRES 1 B 393 MSE SER LEU THR GLU THR GLN SER LEU GLU LEU ALA LYS SEQRES 2 B 393 GLU LEU ILE SER ARG PRO SER VAL THR PRO ASP ASP ARG SEQRES 3 B 393 ASP CYS GLN LYS LEU MSE ALA GLU ARG LEU HIS LYS ILE SEQRES 4 B 393 GLY PHE ALA ALA GLU GLU MSE HIS PHE GLY ASN THR LYS SEQRES 5 B 393 ASN ILE TRP LEU ARG ARG GLY THR LYS ALA PRO VAL VAL SEQRES 6 B 393 CYS PHE ALA GLY HIS THR ASP VAL VAL PRO THR GLY PRO SEQRES 7 B 393 VAL GLU LYS TRP ASP SER PRO PRO PHE GLU PRO ALA GLU SEQRES 8 B 393 ARG ASP GLY ARG LEU TYR GLY ARG GLY ALA ALA ASP MSE SEQRES 9 B 393 LYS THR SER ILE ALA CYS PHE VAL THR ALA CYS GLU ARG SEQRES 10 B 393 PHE VAL ALA LYS HIS PRO ASN HIS GLN GLY SER ILE ALA SEQRES 11 B 393 LEU LEU ILE THR SER ASP GLU GLU GLY ASP ALA LEU ASP SEQRES 12 B 393 GLY THR THR LYS VAL VAL ASP VAL LEU LYS ALA ARG ASP SEQRES 13 B 393 GLU LEU ILE ASP TYR CYS ILE VAL GLY GLU PRO THR ALA SEQRES 14 B 393 VAL ASP LYS LEU GLY ASP MSE ILE LYS ASN GLY ARG ARG SEQRES 15 B 393 GLY SER LEU SER GLY ASN LEU THR VAL LYS GLY LYS GLN SEQRES 16 B 393 GLY HIS ILE ALA TYR PRO HIS LEU ALA ILE ASN PRO VAL SEQRES 17 B 393 HIS THR PHE ALA PRO ALA LEU LEU GLU LEU THR GLN GLU SEQRES 18 B 393 VAL TRP ASP GLU GLY ASN GLU TYR PHE PRO PRO THR SER SEQRES 19 B 393 PHE GLN ILE SER ASN ILE ASN GLY GLY THR GLY ALA THR SEQRES 20 B 393 ASN VAL ILE PRO GLY GLU LEU ASN VAL LYS PHE ASN PHE SEQRES 21 B 393 ARG PHE SER THR GLU SER THR GLU ALA GLY LEU LYS GLN SEQRES 22 B 393 ARG VAL HIS ALA ILE LEU ASP LYS HIS GLY VAL GLN TYR SEQRES 23 B 393 ASP LEU GLN TRP SER CYS SER GLY GLN PRO PHE LEU THR SEQRES 24 B 393 GLN ALA GLY LYS LEU THR ASP VAL ALA ARG ALA ALA ILE SEQRES 25 B 393 ALA GLU THR CYS GLY ILE GLU ALA GLU LEU SER THR THR SEQRES 26 B 393 GLY GLY THR SER ASP GLY ARG PHE ILE LYS ALA MSE ALA SEQRES 27 B 393 GLN GLU LEU ILE GLU LEU GLY PRO SER ASN ALA THR ILE SEQRES 28 B 393 HIS GLN ILE ASN GLU ASN VAL ARG LEU ASN ASP ILE PRO SEQRES 29 B 393 LYS LEU SER ALA VAL TYR GLU GLY ILE LEU VAL ARG LEU SEQRES 30 B 393 LEU ALA GLY ASN ALA VAL GLU GLY GLY SER HIS HIS HIS SEQRES 31 B 393 HIS HIS HIS MODRES 1VGY MSE A 30 MET SELENOMETHIONINE MODRES 1VGY MSE A 44 MET SELENOMETHIONINE MODRES 1VGY MSE A 102 MET SELENOMETHIONINE MODRES 1VGY MSE A 174 MET SELENOMETHIONINE MODRES 1VGY MSE A 335 MET SELENOMETHIONINE MODRES 1VGY MSE B 30 MET SELENOMETHIONINE MODRES 1VGY MSE B 44 MET SELENOMETHIONINE MODRES 1VGY MSE B 102 MET SELENOMETHIONINE MODRES 1VGY MSE B 174 MET SELENOMETHIONINE MODRES 1VGY MSE B 335 MET SELENOMETHIONINE HET MSE A 30 8 HET MSE A 44 8 HET MSE A 102 8 HET MSE A 174 13 HET MSE A 335 8 HET MSE B 30 8 HET MSE B 44 8 HET MSE B 102 8 HET MSE B 174 13 HET MSE B 335 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 HOH *752(H2 O) HELIX 1 1 THR A 4 SER A 15 1 12 HELIX 2 2 ASP A 25 LYS A 36 1 12 HELIX 3 3 PRO A 76 TRP A 80 5 5 HELIX 4 4 MSE A 102 HIS A 120 1 19 HELIX 5 5 GLY A 142 ARG A 153 1 12 HELIX 6 6 TYR A 198 ALA A 202 5 5 HELIX 7 7 ASN A 204 GLU A 219 1 16 HELIX 8 8 THR A 265 HIS A 280 1 16 HELIX 9 9 GLY A 300 GLY A 315 1 16 HELIX 10 10 ASP A 328 LYS A 333 1 6 HELIX 11 11 ASN A 359 LEU A 376 1 18 HELIX 12 12 THR B 4 SER B 15 1 12 HELIX 13 13 ASP B 25 LYS B 36 1 12 HELIX 14 14 PRO B 76 TRP B 80 5 5 HELIX 15 15 MSE B 102 HIS B 120 1 19 HELIX 16 16 GLY B 142 ARG B 153 1 12 HELIX 17 17 TYR B 198 ALA B 202 5 5 HELIX 18 18 ASN B 204 GLU B 219 1 16 HELIX 19 19 THR B 265 HIS B 280 1 16 HELIX 20 20 GLY B 300 GLY B 315 1 16 HELIX 21 21 ASP B 328 LYS B 333 1 6 HELIX 22 22 ASN B 359 LEU B 376 1 18 SHEET 1 A 6 ALA A 40 GLU A 43 0 SHEET 2 A 6 ASN A 51 ARG A 56 -1 O ARG A 55 N ALA A 40 SHEET 3 A 6 SER A 126 THR A 132 -1 O LEU A 129 N LEU A 54 SHEET 4 A 6 VAL A 62 HIS A 68 1 N VAL A 63 O SER A 126 SHEET 5 A 6 ILE A 157 VAL A 162 1 O ILE A 161 N CYS A 64 SHEET 6 A 6 ALA A 336 GLU A 341 1 O ILE A 340 N VAL A 162 SHEET 1 B 3 ALA A 88 ARG A 90 0 SHEET 2 B 3 ARG A 93 TYR A 95 -1 O TYR A 95 N ALA A 88 SHEET 3 B 3 ASN A 355 ARG A 357 -1 O VAL A 356 N LEU A 94 SHEET 1 C 2 MSE A 174 LYS A 176 0 SHEET 2 C 2 GLU A 319 SER A 321 1 O GLU A 319 N ILE A 175 SHEET 1 D 2 GLY A 178 ARG A 179 0 SHEET 2 D 2 PHE A 295 LEU A 296 -1 O PHE A 295 N ARG A 179 SHEET 1 E 8 TYR A 284 GLY A 292 0 SHEET 2 E 8 GLY A 181 LYS A 190 -1 N SER A 184 O SER A 289 SHEET 3 E 8 GLU A 251 PHE A 260 -1 O VAL A 254 N LEU A 187 SHEET 4 E 8 SER A 232 GLY A 240 -1 N ASN A 239 O ASN A 253 SHEET 5 E 8 SER B 232 GLY B 240 -1 O GLY B 240 N ILE A 238 SHEET 6 E 8 GLU B 251 PHE B 260 -1 O ASN B 253 N ASN B 239 SHEET 7 E 8 GLY B 181 LYS B 190 -1 N VAL B 189 O LEU B 252 SHEET 8 E 8 TYR B 284 GLY B 292 -1 O SER B 289 N SER B 184 SHEET 1 F 2 GLY A 194 HIS A 195 0 SHEET 2 F 2 VAL A 247 ILE A 248 -1 O ILE A 248 N GLY A 194 SHEET 1 G 6 ALA B 40 GLU B 43 0 SHEET 2 G 6 ASN B 51 ARG B 56 -1 O ARG B 55 N ALA B 40 SHEET 3 G 6 SER B 126 THR B 132 -1 O ILE B 127 N ARG B 56 SHEET 4 G 6 VAL B 62 HIS B 68 1 N VAL B 63 O SER B 126 SHEET 5 G 6 ILE B 157 VAL B 162 1 O TYR B 159 N CYS B 64 SHEET 6 G 6 ALA B 336 GLU B 341 1 O ILE B 340 N CYS B 160 SHEET 1 H 3 ALA B 88 ARG B 90 0 SHEET 2 H 3 ARG B 93 TYR B 95 -1 O TYR B 95 N ALA B 88 SHEET 3 H 3 ASN B 355 ARG B 357 -1 O VAL B 356 N LEU B 94 SHEET 1 I 2 MSE B 174 LYS B 176 0 SHEET 2 I 2 GLU B 319 SER B 321 1 O GLU B 319 N ILE B 175 SHEET 1 J 2 GLY B 178 ARG B 179 0 SHEET 2 J 2 PHE B 295 LEU B 296 -1 O PHE B 295 N ARG B 179 SHEET 1 K 2 GLY B 194 HIS B 195 0 SHEET 2 K 2 VAL B 247 ILE B 248 -1 O ILE B 248 N GLY B 194 LINK C LEU A 29 N MSE A 30 1555 1555 1.34 LINK C MSE A 30 N ALA A 31 1555 1555 1.32 LINK C GLU A 43 N MSE A 44 1555 1555 1.34 LINK C MSE A 44 N HIS A 45 1555 1555 1.33 LINK C ASP A 101 N MSE A 102 1555 1555 1.33 LINK C MSE A 102 N LYS A 103 1555 1555 1.34 LINK C ASP A 173 N MSE A 174 1555 1555 1.33 LINK C MSE A 174 N ILE A 175 1555 1555 1.32 LINK C ALA A 334 N MSE A 335 1555 1555 1.33 LINK C MSE A 335 N ALA A 336 1555 1555 1.33 LINK C LEU B 29 N MSE B 30 1555 1555 1.35 LINK C MSE B 30 N ALA B 31 1555 1555 1.32 LINK C GLU B 43 N MSE B 44 1555 1555 1.34 LINK C MSE B 44 N HIS B 45 1555 1555 1.33 LINK C ASP B 101 N MSE B 102 1555 1555 1.33 LINK C MSE B 102 N LYS B 103 1555 1555 1.34 LINK C ASP B 173 N MSE B 174 1555 1555 1.33 LINK C MSE B 174 N ILE B 175 1555 1555 1.32 LINK C ALA B 334 N MSE B 335 1555 1555 1.33 LINK C MSE B 335 N ALA B 336 1555 1555 1.33 CISPEP 1 THR A 20 PRO A 21 0 -1.29 CISPEP 2 ALA A 60 PRO A 61 0 1.18 CISPEP 3 ASP A 101 MSE A 102 0 -0.85 CISPEP 4 THR B 20 PRO B 21 0 -1.21 CISPEP 5 ALA B 60 PRO B 61 0 0.03 CISPEP 6 ASP B 101 MSE B 102 0 -1.16 CRYST1 82.655 56.500 101.400 90.00 103.19 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012098 0.000000 0.002835 0.00000 SCALE2 0.000000 0.017699 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010129 0.00000