HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 03-NOV-03 1VH0 TITLE CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL UPF0247 PROTEIN SAV0024/SA0023; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: SAV0024, SA0023; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR STRUCTURAL GENOMIX REVDAT 7 27-DEC-23 1VH0 1 REMARK REVDAT 6 04-OCT-17 1VH0 1 REMARK REVDAT 5 13-JUL-11 1VH0 1 VERSN REVDAT 4 24-FEB-09 1VH0 1 VERSN REVDAT 3 30-AUG-05 1VH0 1 JRNL REVDAT 2 30-DEC-03 1VH0 1 JRNL REVDAT 1 25-NOV-03 1VH0 0 JRNL AUTH J.BADGER,J.M.SAUDER,J.M.ADAMS,S.ANTONYSAMY,K.BAIN, JRNL AUTH 2 M.G.BERGSEID,S.G.BUCHANAN,M.D.BUCHANAN,Y.BATIYENKO, JRNL AUTH 3 J.A.CHRISTOPHER,S.EMTAGE,A.EROSHKINA,I.FEIL,E.B.FURLONG, JRNL AUTH 4 K.S.GAJIWALA,X.GAO,D.HE,J.HENDLE,A.HUBER,K.HODA,P.KEARINS, JRNL AUTH 5 C.KISSINGER,B.LAUBERT,H.A.LEWIS,J.LIN,K.LOOMIS,D.LORIMER, JRNL AUTH 6 G.LOUIE,M.MALETIC,C.D.MARSH,I.MILLER,J.MOLINARI, JRNL AUTH 7 H.J.MULLER-DIECKMANN,J.M.NEWMAN,B.W.NOLAND,B.PAGARIGAN, JRNL AUTH 8 F.PARK,T.S.PEAT,K.W.POST,S.RADOJICIC,A.RAMOS,R.ROMERO, JRNL AUTH 9 M.E.RUTTER,W.E.SANDERSON,K.D.SCHWINN,J.TRESSER,J.WINHOVEN, JRNL AUTH10 T.A.WRIGHT,L.WU,J.XU,T.J.HARRIS JRNL TITL STRUCTURAL ANALYSIS OF A SET OF PROTEINS RESULTING FROM A JRNL TITL 2 BACTERIAL GENOMICS PROJECT JRNL REF PROTEINS V. 60 787 2005 JRNL REFN ISSN 0887-3585 JRNL PMID 16021622 JRNL DOI 10.1002/PROT.20541 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 4.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.92 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 46731 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.260 REMARK 3 FREE R VALUE : 0.318 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2359 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7437 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 321 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.52500 REMARK 3 B22 (A**2) : -1.64700 REMARK 3 B33 (A**2) : -0.98000 REMARK 3 B12 (A**2) : 0.22600 REMARK 3 B13 (A**2) : -0.22100 REMARK 3 B23 (A**2) : 0.75200 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.018 ; NULL REMARK 3 ANGLE DISTANCE (A) : 2.581 ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.019 ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.191 ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : 2.994 ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.363 ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.742 ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : 4.018 ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : 5.576 ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1VH0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-NOV-03. REMARK 100 THE DEPOSITION ID IS D_1000001859. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 32-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM, TRUNCATE REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA, TRUNCATE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 87017 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 37.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.57300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6, 7, 8, 9 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 7 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 2310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 8 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 2480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 9 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 2430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 SER A 0 REMARK 465 HIS A 158 REMARK 465 LYS A 159 REMARK 465 MET B -1 REMARK 465 SER B 0 REMARK 465 HIS B 158 REMARK 465 LYS B 159 REMARK 465 MET C -1 REMARK 465 SER C 0 REMARK 465 HIS C 158 REMARK 465 LYS C 159 REMARK 465 MET D -1 REMARK 465 SER D 0 REMARK 465 GLU D 41 REMARK 465 LYS D 42 REMARK 465 ALA D 43 REMARK 465 PRO D 44 REMARK 465 GLU D 45 REMARK 465 ASN D 46 REMARK 465 MET D 47 REMARK 465 SER D 48 REMARK 465 ASP D 49 REMARK 465 HIS D 158 REMARK 465 LYS D 159 REMARK 465 MET E -1 REMARK 465 SER E 0 REMARK 465 HIS E 158 REMARK 465 LYS E 159 REMARK 465 MET F -1 REMARK 465 SER F 0 REMARK 465 GLU F 45 REMARK 465 ASN F 46 REMARK 465 MET F 47 REMARK 465 HIS F 158 REMARK 465 LYS F 159 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 68 CG CD CE NZ REMARK 470 LYS B 12 CG CD CE NZ REMARK 470 LYS C 2 CE NZ REMARK 470 GLU C 13 CG CD OE1 OE2 REMARK 470 LYS D 10 CG CD CE NZ REMARK 470 LEU D 11 CG CD1 CD2 REMARK 470 SER D 121 OG REMARK 470 GLU E 13 CG CD OE1 OE2 REMARK 470 LYS E 32 CG CD CE NZ REMARK 470 ILE E 33 CG1 CG2 CD1 REMARK 470 SER E 101 OG REMARK 470 GLN E 135 CG CD OE1 NE2 REMARK 470 LYS F 10 CG CD CE NZ REMARK 470 ASP F 49 CG OD1 OD2 REMARK 470 LYS F 50 CG CD CE NZ REMARK 470 GLN F 98 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 91 NH1 ARG B 95 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 95 NE - CZ - NH1 ANGL. DEV. = -5.0 DEGREES REMARK 500 ARG A 153 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG B 95 CD - NE - CZ ANGL. DEV. = 11.5 DEGREES REMARK 500 ARG B 95 NE - CZ - NH1 ANGL. DEV. = -4.9 DEGREES REMARK 500 ARG B 153 CD - NE - CZ ANGL. DEV. = 16.2 DEGREES REMARK 500 ARG C 120 CD - NE - CZ ANGL. DEV. = -9.4 DEGREES REMARK 500 ARG C 120 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG E 26 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG E 62 CD - NE - CZ ANGL. DEV. = 11.5 DEGREES REMARK 500 ARG E 62 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 MET E 96 CA - CB - CG ANGL. DEV. = 20.2 DEGREES REMARK 500 GLU F 59 OE1 - CD - OE2 ANGL. DEV. = 7.3 DEGREES REMARK 500 ARG F 62 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG F 95 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 44 171.71 -59.11 REMARK 500 GLN A 98 34.82 -77.74 REMARK 500 LYS B 10 -167.61 -109.39 REMARK 500 THR B 31 156.33 178.55 REMARK 500 GLU B 41 97.92 -69.96 REMARK 500 GLN B 98 30.73 -85.52 REMARK 500 LYS C 14 -35.32 -35.99 REMARK 500 SER D 71 139.10 -33.78 REMARK 500 SER D 101 -13.18 -142.18 REMARK 500 PRO E 44 172.28 -58.70 REMARK 500 GLN E 98 48.99 -104.44 REMARK 500 LYS F 12 -17.61 -149.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LEU A 64 -10.81 REMARK 500 GLN A 94 -10.55 REMARK 500 PHE A 132 11.28 REMARK 500 TYR A 146 -13.34 REMARK 500 ASP B 102 11.51 REMARK 500 TYR C 30 12.83 REMARK 500 LEU C 118 -13.19 REMARK 500 LYS D 14 -10.04 REMARK 500 HIS D 114 -10.63 REMARK 500 SER D 128 -11.82 REMARK 500 LYS E 2 10.19 REMARK 500 GLY E 109 -12.48 REMARK 500 REMARK 500 REMARK: NULL DBREF 1VH0 A 2 159 UNP P0A0N8 YU247_STAAU 2 159 DBREF 1VH0 B 2 159 UNP P0A0N8 YU247_STAAU 2 159 DBREF 1VH0 C 2 159 UNP P0A0N8 YU247_STAAU 2 159 DBREF 1VH0 D 2 159 UNP P0A0N8 YU247_STAAU 2 159 DBREF 1VH0 E 2 159 UNP P0A0N8 YU247_STAAU 2 159 DBREF 1VH0 F 2 159 UNP P0A0N8 YU247_STAAU 2 159 SEQADV 1VH0 MET A -1 UNP P0A0N8 CLONING ARTIFACT SEQADV 1VH0 SER A 0 UNP P0A0N8 CLONING ARTIFACT SEQADV 1VH0 LEU A 1 UNP P0A0N8 CLONING ARTIFACT SEQADV 1VH0 MET B -1 UNP P0A0N8 CLONING ARTIFACT SEQADV 1VH0 SER B 0 UNP P0A0N8 CLONING ARTIFACT SEQADV 1VH0 LEU B 1 UNP P0A0N8 CLONING ARTIFACT SEQADV 1VH0 MET C -1 UNP P0A0N8 CLONING ARTIFACT SEQADV 1VH0 SER C 0 UNP P0A0N8 CLONING ARTIFACT SEQADV 1VH0 LEU C 1 UNP P0A0N8 CLONING ARTIFACT SEQADV 1VH0 MET D -1 UNP P0A0N8 CLONING ARTIFACT SEQADV 1VH0 SER D 0 UNP P0A0N8 CLONING ARTIFACT SEQADV 1VH0 LEU D 1 UNP P0A0N8 CLONING ARTIFACT SEQADV 1VH0 MET E -1 UNP P0A0N8 CLONING ARTIFACT SEQADV 1VH0 SER E 0 UNP P0A0N8 CLONING ARTIFACT SEQADV 1VH0 LEU E 1 UNP P0A0N8 CLONING ARTIFACT SEQADV 1VH0 MET F -1 UNP P0A0N8 CLONING ARTIFACT SEQADV 1VH0 SER F 0 UNP P0A0N8 CLONING ARTIFACT SEQADV 1VH0 LEU F 1 UNP P0A0N8 CLONING ARTIFACT SEQRES 1 A 161 MET SER LEU LYS ILE THR ILE LEU ALA VAL GLY LYS LEU SEQRES 2 A 161 LYS GLU LYS TYR TRP LYS GLN ALA ILE ALA GLU TYR GLU SEQRES 3 A 161 LYS ARG LEU GLY PRO TYR THR LYS ILE ASP ILE ILE GLU SEQRES 4 A 161 VAL PRO ASP GLU LYS ALA PRO GLU ASN MET SER ASP LYS SEQRES 5 A 161 GLU ILE GLU GLN VAL LYS GLU LYS GLU GLY GLN ARG ILE SEQRES 6 A 161 LEU ALA LYS ILE LYS PRO GLN SER THR VAL ILE THR LEU SEQRES 7 A 161 GLU ILE GLN GLY LYS MET LEU SER SER GLU GLY LEU ALA SEQRES 8 A 161 GLN GLU LEU ASN GLN ARG MET THR GLN GLY GLN SER ASP SEQRES 9 A 161 PHE VAL PHE VAL ILE GLY GLY SER ASN GLY LEU HIS LYS SEQRES 10 A 161 ASP VAL LEU GLN ARG SER ASN TYR ALA LEU SER PHE SER SEQRES 11 A 161 LYS MET THR PHE PRO HIS GLN MET MET ARG VAL VAL LEU SEQRES 12 A 161 ILE GLU GLN VAL TYR ARG ALA PHE LYS ILE MET ARG GLY SEQRES 13 A 161 GLU ALA TYR HIS LYS SEQRES 1 B 161 MET SER LEU LYS ILE THR ILE LEU ALA VAL GLY LYS LEU SEQRES 2 B 161 LYS GLU LYS TYR TRP LYS GLN ALA ILE ALA GLU TYR GLU SEQRES 3 B 161 LYS ARG LEU GLY PRO TYR THR LYS ILE ASP ILE ILE GLU SEQRES 4 B 161 VAL PRO ASP GLU LYS ALA PRO GLU ASN MET SER ASP LYS SEQRES 5 B 161 GLU ILE GLU GLN VAL LYS GLU LYS GLU GLY GLN ARG ILE SEQRES 6 B 161 LEU ALA LYS ILE LYS PRO GLN SER THR VAL ILE THR LEU SEQRES 7 B 161 GLU ILE GLN GLY LYS MET LEU SER SER GLU GLY LEU ALA SEQRES 8 B 161 GLN GLU LEU ASN GLN ARG MET THR GLN GLY GLN SER ASP SEQRES 9 B 161 PHE VAL PHE VAL ILE GLY GLY SER ASN GLY LEU HIS LYS SEQRES 10 B 161 ASP VAL LEU GLN ARG SER ASN TYR ALA LEU SER PHE SER SEQRES 11 B 161 LYS MET THR PHE PRO HIS GLN MET MET ARG VAL VAL LEU SEQRES 12 B 161 ILE GLU GLN VAL TYR ARG ALA PHE LYS ILE MET ARG GLY SEQRES 13 B 161 GLU ALA TYR HIS LYS SEQRES 1 C 161 MET SER LEU LYS ILE THR ILE LEU ALA VAL GLY LYS LEU SEQRES 2 C 161 LYS GLU LYS TYR TRP LYS GLN ALA ILE ALA GLU TYR GLU SEQRES 3 C 161 LYS ARG LEU GLY PRO TYR THR LYS ILE ASP ILE ILE GLU SEQRES 4 C 161 VAL PRO ASP GLU LYS ALA PRO GLU ASN MET SER ASP LYS SEQRES 5 C 161 GLU ILE GLU GLN VAL LYS GLU LYS GLU GLY GLN ARG ILE SEQRES 6 C 161 LEU ALA LYS ILE LYS PRO GLN SER THR VAL ILE THR LEU SEQRES 7 C 161 GLU ILE GLN GLY LYS MET LEU SER SER GLU GLY LEU ALA SEQRES 8 C 161 GLN GLU LEU ASN GLN ARG MET THR GLN GLY GLN SER ASP SEQRES 9 C 161 PHE VAL PHE VAL ILE GLY GLY SER ASN GLY LEU HIS LYS SEQRES 10 C 161 ASP VAL LEU GLN ARG SER ASN TYR ALA LEU SER PHE SER SEQRES 11 C 161 LYS MET THR PHE PRO HIS GLN MET MET ARG VAL VAL LEU SEQRES 12 C 161 ILE GLU GLN VAL TYR ARG ALA PHE LYS ILE MET ARG GLY SEQRES 13 C 161 GLU ALA TYR HIS LYS SEQRES 1 D 161 MET SER LEU LYS ILE THR ILE LEU ALA VAL GLY LYS LEU SEQRES 2 D 161 LYS GLU LYS TYR TRP LYS GLN ALA ILE ALA GLU TYR GLU SEQRES 3 D 161 LYS ARG LEU GLY PRO TYR THR LYS ILE ASP ILE ILE GLU SEQRES 4 D 161 VAL PRO ASP GLU LYS ALA PRO GLU ASN MET SER ASP LYS SEQRES 5 D 161 GLU ILE GLU GLN VAL LYS GLU LYS GLU GLY GLN ARG ILE SEQRES 6 D 161 LEU ALA LYS ILE LYS PRO GLN SER THR VAL ILE THR LEU SEQRES 7 D 161 GLU ILE GLN GLY LYS MET LEU SER SER GLU GLY LEU ALA SEQRES 8 D 161 GLN GLU LEU ASN GLN ARG MET THR GLN GLY GLN SER ASP SEQRES 9 D 161 PHE VAL PHE VAL ILE GLY GLY SER ASN GLY LEU HIS LYS SEQRES 10 D 161 ASP VAL LEU GLN ARG SER ASN TYR ALA LEU SER PHE SER SEQRES 11 D 161 LYS MET THR PHE PRO HIS GLN MET MET ARG VAL VAL LEU SEQRES 12 D 161 ILE GLU GLN VAL TYR ARG ALA PHE LYS ILE MET ARG GLY SEQRES 13 D 161 GLU ALA TYR HIS LYS SEQRES 1 E 161 MET SER LEU LYS ILE THR ILE LEU ALA VAL GLY LYS LEU SEQRES 2 E 161 LYS GLU LYS TYR TRP LYS GLN ALA ILE ALA GLU TYR GLU SEQRES 3 E 161 LYS ARG LEU GLY PRO TYR THR LYS ILE ASP ILE ILE GLU SEQRES 4 E 161 VAL PRO ASP GLU LYS ALA PRO GLU ASN MET SER ASP LYS SEQRES 5 E 161 GLU ILE GLU GLN VAL LYS GLU LYS GLU GLY GLN ARG ILE SEQRES 6 E 161 LEU ALA LYS ILE LYS PRO GLN SER THR VAL ILE THR LEU SEQRES 7 E 161 GLU ILE GLN GLY LYS MET LEU SER SER GLU GLY LEU ALA SEQRES 8 E 161 GLN GLU LEU ASN GLN ARG MET THR GLN GLY GLN SER ASP SEQRES 9 E 161 PHE VAL PHE VAL ILE GLY GLY SER ASN GLY LEU HIS LYS SEQRES 10 E 161 ASP VAL LEU GLN ARG SER ASN TYR ALA LEU SER PHE SER SEQRES 11 E 161 LYS MET THR PHE PRO HIS GLN MET MET ARG VAL VAL LEU SEQRES 12 E 161 ILE GLU GLN VAL TYR ARG ALA PHE LYS ILE MET ARG GLY SEQRES 13 E 161 GLU ALA TYR HIS LYS SEQRES 1 F 161 MET SER LEU LYS ILE THR ILE LEU ALA VAL GLY LYS LEU SEQRES 2 F 161 LYS GLU LYS TYR TRP LYS GLN ALA ILE ALA GLU TYR GLU SEQRES 3 F 161 LYS ARG LEU GLY PRO TYR THR LYS ILE ASP ILE ILE GLU SEQRES 4 F 161 VAL PRO ASP GLU LYS ALA PRO GLU ASN MET SER ASP LYS SEQRES 5 F 161 GLU ILE GLU GLN VAL LYS GLU LYS GLU GLY GLN ARG ILE SEQRES 6 F 161 LEU ALA LYS ILE LYS PRO GLN SER THR VAL ILE THR LEU SEQRES 7 F 161 GLU ILE GLN GLY LYS MET LEU SER SER GLU GLY LEU ALA SEQRES 8 F 161 GLN GLU LEU ASN GLN ARG MET THR GLN GLY GLN SER ASP SEQRES 9 F 161 PHE VAL PHE VAL ILE GLY GLY SER ASN GLY LEU HIS LYS SEQRES 10 F 161 ASP VAL LEU GLN ARG SER ASN TYR ALA LEU SER PHE SER SEQRES 11 F 161 LYS MET THR PHE PRO HIS GLN MET MET ARG VAL VAL LEU SEQRES 12 F 161 ILE GLU GLN VAL TYR ARG ALA PHE LYS ILE MET ARG GLY SEQRES 13 F 161 GLU ALA TYR HIS LYS FORMUL 7 HOH *321(H2 O) HELIX 1 1 GLU A 13 GLY A 28 1 16 HELIX 2 2 PRO A 29 THR A 31 5 3 HELIX 3 3 SER A 48 LYS A 66 1 19 HELIX 4 4 SER A 84 GLN A 98 1 15 HELIX 5 5 HIS A 114 SER A 121 1 8 HELIX 6 6 PRO A 133 ARG A 153 1 21 HELIX 7 7 GLU B 13 GLY B 28 1 16 HELIX 8 8 PRO B 29 THR B 31 5 3 HELIX 9 9 SER B 48 ILE B 67 1 20 HELIX 10 10 SER B 84 GLN B 98 1 15 HELIX 11 11 HIS B 114 SER B 121 1 8 HELIX 12 12 PRO B 133 ARG B 153 1 21 HELIX 13 13 GLU C 13 GLY C 28 1 16 HELIX 14 14 SER C 48 LYS C 66 1 19 HELIX 15 15 SER C 84 GLN C 98 1 15 HELIX 16 16 HIS C 114 SER C 121 1 8 HELIX 17 17 PRO C 133 ARG C 153 1 21 HELIX 18 18 GLU D 13 GLY D 28 1 16 HELIX 19 19 PRO D 29 THR D 31 5 3 HELIX 20 20 LYS D 50 LYS D 66 1 17 HELIX 21 21 SER D 84 GLN D 98 1 15 HELIX 22 22 HIS D 114 SER D 121 1 8 HELIX 23 23 PRO D 133 ARG D 153 1 21 HELIX 24 24 GLU E 13 LYS E 25 1 13 HELIX 25 25 SER E 48 ALA E 65 1 18 HELIX 26 26 SER E 84 GLN E 98 1 15 HELIX 27 27 HIS E 114 SER E 121 1 8 HELIX 28 28 PRO E 133 ARG E 153 1 21 HELIX 29 29 GLU F 13 GLY F 28 1 16 HELIX 30 30 PRO F 29 THR F 31 5 3 HELIX 31 31 SER F 48 ALA F 65 1 18 HELIX 32 32 SER F 84 GLN F 98 1 15 HELIX 33 33 HIS F 114 GLN F 119 1 6 HELIX 34 34 PRO F 133 GLY F 154 1 22 SHEET 1 A 5 LYS A 32 VAL A 38 0 SHEET 2 A 5 LYS A 2 VAL A 8 1 N ILE A 3 O ASP A 34 SHEET 3 A 5 ASP A 102 ILE A 107 1 O PHE A 105 N THR A 4 SHEET 4 A 5 THR A 72 LEU A 76 1 N ILE A 74 O VAL A 104 SHEET 5 A 5 TYR A 123 LEU A 125 1 O LEU A 125 N THR A 75 SHEET 1 B 5 LYS B 32 VAL B 38 0 SHEET 2 B 5 LYS B 2 VAL B 8 1 N ILE B 5 O ASP B 34 SHEET 3 B 5 ASP B 102 ILE B 107 1 O PHE B 105 N THR B 4 SHEET 4 B 5 THR B 72 LEU B 76 1 N ILE B 74 O VAL B 106 SHEET 5 B 5 TYR B 123 LEU B 125 1 O LEU B 125 N THR B 75 SHEET 1 C 5 LYS C 32 VAL C 38 0 SHEET 2 C 5 LYS C 2 VAL C 8 1 N ILE C 5 O ASP C 34 SHEET 3 C 5 ASP C 102 ILE C 107 1 O PHE C 105 N LEU C 6 SHEET 4 C 5 THR C 72 LEU C 76 1 N THR C 72 O ASP C 102 SHEET 5 C 5 TYR C 123 LEU C 125 1 O LEU C 125 N THR C 75 SHEET 1 D 5 LYS D 32 VAL D 38 0 SHEET 2 D 5 LYS D 2 VAL D 8 1 N ALA D 7 O VAL D 38 SHEET 3 D 5 ASP D 102 ILE D 107 1 O PHE D 103 N THR D 4 SHEET 4 D 5 THR D 72 LEU D 76 1 N THR D 72 O VAL D 104 SHEET 5 D 5 TYR D 123 LEU D 125 1 O TYR D 123 N THR D 75 SHEET 1 E 5 LYS E 32 VAL E 38 0 SHEET 2 E 5 LYS E 2 VAL E 8 1 N ALA E 7 O VAL E 38 SHEET 3 E 5 ASP E 102 ILE E 107 1 O PHE E 105 N THR E 4 SHEET 4 E 5 THR E 72 LEU E 76 1 N THR E 72 O ASP E 102 SHEET 5 E 5 TYR E 123 LEU E 125 1 O LEU E 125 N THR E 75 SHEET 1 F 5 LYS F 32 VAL F 38 0 SHEET 2 F 5 LYS F 2 VAL F 8 1 N ILE F 5 O ILE F 36 SHEET 3 F 5 ASP F 102 ILE F 107 1 O PHE F 103 N THR F 4 SHEET 4 F 5 THR F 72 LEU F 76 1 N ILE F 74 O VAL F 104 SHEET 5 F 5 TYR F 123 LEU F 125 1 O LEU F 125 N THR F 75 CRYST1 48.527 74.496 81.531 91.06 107.14 90.14 P 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020607 0.000050 0.006358 0.00000 SCALE2 0.000000 0.013424 0.000270 0.00000 SCALE3 0.000000 0.000000 0.012838 0.00000