data_1VHH # _entry.id 1VHH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1VHH WWPDB D_1000177035 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1VHH _pdbx_database_status.recvd_initial_deposition_date 1995-10-03 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hall, T.M.T.' 1 'Porter, J.A.' 2 'Beachy, P.A.' 3 'Leahy, D.J.' 4 # _citation.id primary _citation.title 'A potential catalytic site revealed by the 1.7-A crystal structure of the amino-terminal signalling domain of Sonic hedgehog.' _citation.journal_abbrev Nature _citation.journal_volume 378 _citation.page_first 212 _citation.page_last 216 _citation.year 1995 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 7477329 _citation.pdbx_database_id_DOI 10.1038/378212a0 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Hall, T.M.' 1 primary 'Porter, J.A.' 2 primary 'Beachy, P.A.' 3 primary 'Leahy, D.J.' 4 # _cell.entry_id 1VHH _cell.length_a 53.700 _cell.length_b 79.000 _cell.length_c 35.400 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VHH _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SONIC HEDGEHOG' 18544.869 1 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 4 water nat water 18.015 120 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'HHG-1, VHH-1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;RRHPKKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAIS VMNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAHIHCSVKAENSVA AK ; _entity_poly.pdbx_seq_one_letter_code_can ;RRHPKKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAIS VMNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAHIHCSVKAENSVA AK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 ARG n 1 3 HIS n 1 4 PRO n 1 5 LYS n 1 6 LYS n 1 7 LEU n 1 8 THR n 1 9 PRO n 1 10 LEU n 1 11 ALA n 1 12 TYR n 1 13 LYS n 1 14 GLN n 1 15 PHE n 1 16 ILE n 1 17 PRO n 1 18 ASN n 1 19 VAL n 1 20 ALA n 1 21 GLU n 1 22 LYS n 1 23 THR n 1 24 LEU n 1 25 GLY n 1 26 ALA n 1 27 SER n 1 28 GLY n 1 29 ARG n 1 30 TYR n 1 31 GLU n 1 32 GLY n 1 33 LYS n 1 34 ILE n 1 35 THR n 1 36 ARG n 1 37 ASN n 1 38 SER n 1 39 GLU n 1 40 ARG n 1 41 PHE n 1 42 LYS n 1 43 GLU n 1 44 LEU n 1 45 THR n 1 46 PRO n 1 47 ASN n 1 48 TYR n 1 49 ASN n 1 50 PRO n 1 51 ASP n 1 52 ILE n 1 53 ILE n 1 54 PHE n 1 55 LYS n 1 56 ASP n 1 57 GLU n 1 58 GLU n 1 59 ASN n 1 60 THR n 1 61 GLY n 1 62 ALA n 1 63 ASP n 1 64 ARG n 1 65 LEU n 1 66 MET n 1 67 THR n 1 68 GLN n 1 69 ARG n 1 70 CYS n 1 71 LYS n 1 72 ASP n 1 73 LYS n 1 74 LEU n 1 75 ASN n 1 76 ALA n 1 77 LEU n 1 78 ALA n 1 79 ILE n 1 80 SER n 1 81 VAL n 1 82 MET n 1 83 ASN n 1 84 GLN n 1 85 TRP n 1 86 PRO n 1 87 GLY n 1 88 VAL n 1 89 LYS n 1 90 LEU n 1 91 ARG n 1 92 VAL n 1 93 THR n 1 94 GLU n 1 95 GLY n 1 96 TRP n 1 97 ASP n 1 98 GLU n 1 99 ASP n 1 100 GLY n 1 101 HIS n 1 102 HIS n 1 103 SER n 1 104 GLU n 1 105 GLU n 1 106 SER n 1 107 LEU n 1 108 HIS n 1 109 TYR n 1 110 GLU n 1 111 GLY n 1 112 ARG n 1 113 ALA n 1 114 VAL n 1 115 ASP n 1 116 ILE n 1 117 THR n 1 118 THR n 1 119 SER n 1 120 ASP n 1 121 ARG n 1 122 ASP n 1 123 ARG n 1 124 SER n 1 125 LYS n 1 126 TYR n 1 127 GLY n 1 128 MET n 1 129 LEU n 1 130 ALA n 1 131 ARG n 1 132 LEU n 1 133 ALA n 1 134 VAL n 1 135 GLU n 1 136 ALA n 1 137 GLY n 1 138 PHE n 1 139 ASP n 1 140 TRP n 1 141 VAL n 1 142 TYR n 1 143 TYR n 1 144 GLU n 1 145 SER n 1 146 LYS n 1 147 ALA n 1 148 HIS n 1 149 ILE n 1 150 HIS n 1 151 CYS n 1 152 SER n 1 153 VAL n 1 154 LYS n 1 155 ALA n 1 156 GLU n 1 157 ASN n 1 158 SER n 1 159 VAL n 1 160 ALA n 1 161 ALA n 1 162 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene POTENTIAL _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PGEX2T _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SHH_MOUSE _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession Q62226 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MLLLLARCFLVILASSLLVCPGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPN YNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYG MLARLAVEAGFDWVYYESKAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLAADDQGRLLYSDFL TFLDRDEGAKKVFYVIETLEPRERLLLTAAHLLFVAPHNDSGPTPGPSALFASRVRPGQRVYVVAERGGDRRLLPAAVHS VTLREEEAGAYAPLTAHGTILINRVLASCYAVIEEHSWAHRAFAPFRLAHALLAALAPARTDGGGGGSIPAAQSATEARG AEPTAGIHWYSQLLYHIGTWLLDSETMHPLGMAVKSS ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1VHH _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 162 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q62226 _struct_ref_seq.db_align_beg 34 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 195 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 34 _struct_ref_seq.pdbx_auth_seq_align_end 195 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 1VHH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.02 _exptl_crystal.density_percent_sol 39.22 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type FUJI _diffrn_detector.pdbx_collection_date 1995-01-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9686 1.0 2 0.9792 1.0 3 0.9793 1.0 4 0.9879 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9686, 0.9792, 0.9793, 0.9879' # _reflns.entry_id 1VHH _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 1.70 _reflns.number_obs 14968 _reflns.number_all ? _reflns.percent_possible_obs 86.4 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.7 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1VHH _refine.ls_number_reflns_obs 14783 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.0 _refine.ls_d_res_high 1.7 _refine.ls_percent_reflns_obs 83.4 _refine.ls_R_factor_obs 0.191 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.191 _refine.ls_R_factor_R_free 0.261 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 10.53 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1560 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 360 _refine_hist.number_atoms_total 1926 _refine_hist.d_res_high 1.7 _refine_hist.d_res_low 6.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.968 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 22.42 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.385 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1VHH _struct.title 'A POTENTIAL CATALYTIC SITE WITHIN THE AMINO-TERMINAL SIGNALLING DOMAIN OF SONIC HEDGEHOG' _struct.pdbx_descriptor 'SONIC HEDGEHOG' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1VHH _struct_keywords.pdbx_keywords 'SIGNALLING PROTEIN' _struct_keywords.text 'SIGNALLING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 39 ? GLU A 43 ? GLU A 72 GLU A 76 5 ? 5 HELX_P HELX_P2 2 ALA A 62 ? ARG A 64 ? ALA A 95 ARG A 97 5 ? 3 HELX_P HELX_P3 3 GLN A 68 ? GLN A 84 ? GLN A 101 GLN A 117 1 ? 17 HELX_P HELX_P4 4 LEU A 107 ? GLU A 110 ? LEU A 140 GLU A 143 5 ? 4 HELX_P HELX_P5 5 ARG A 123 ? GLU A 135 ? ARG A 156 GLU A 168 5 ? 13 HELX_P HELX_P6 6 GLU A 156 ? VAL A 159 ? GLU A 189 VAL A 192 1 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? B ZN . ZN ? ? ? 1_555 A ASP 115 OD1 ? ? A ZN 400 A ASP 148 1_555 ? ? ? ? ? ? ? 1.965 ? metalc2 metalc ? ? B ZN . ZN ? ? ? 1_555 A HIS 150 ND1 ? ? A ZN 400 A HIS 183 1_555 ? ? ? ? ? ? ? 2.082 ? metalc3 metalc ? ? B ZN . ZN ? ? ? 1_555 A HIS 108 NE2 ? ? A ZN 400 A HIS 141 1_555 ? ? ? ? ? ? ? 2.060 ? metalc4 metalc ? ? B ZN . ZN ? ? ? 1_555 D HOH . O ? ? A ZN 400 A HOH 201 1_555 ? ? ? ? ? ? ? 2.048 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ILE _struct_mon_prot_cis.label_seq_id 16 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ILE _struct_mon_prot_cis.auth_seq_id 49 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 17 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 50 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.03 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 52 ? PHE A 54 ? ILE A 85 PHE A 87 A 2 LEU A 90 ? GLU A 94 ? LEU A 123 GLU A 127 A 3 ALA A 113 ? THR A 118 ? ALA A 146 THR A 151 A 4 ILE A 149 ? SER A 152 ? ILE A 182 SER A 185 A 5 TRP A 140 ? TYR A 142 ? TRP A 173 TYR A 175 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 53 ? O ILE A 86 N LEU A 90 ? N LEU A 123 A 2 3 O ARG A 91 ? O ARG A 124 N THR A 117 ? N THR A 150 A 3 4 O VAL A 114 ? O VAL A 147 N CYS A 151 ? N CYS A 184 A 4 5 O HIS A 150 ? O HIS A 183 N TYR A 142 ? N TYR A 175 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details ZN1 Unknown ? ? ? ? 4 ? AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE ZN A 400' AC2 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE SO4 A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 ZN1 4 HIS A 108 ? HIS A 141 . ? 1_555 ? 2 ZN1 4 ASP A 115 ? ASP A 148 . ? 1_555 ? 3 ZN1 4 HIS A 150 ? HIS A 183 . ? 1_555 ? 4 ZN1 4 HOH D . ? HOH A 201 . ? 1_555 ? 5 AC1 6 HIS A 108 ? HIS A 141 . ? 1_555 ? 6 AC1 6 ASP A 115 ? ASP A 148 . ? 1_555 ? 7 AC1 6 GLU A 144 ? GLU A 177 . ? 1_555 ? 8 AC1 6 HIS A 150 ? HIS A 183 . ? 1_555 ? 9 AC1 6 LYS A 162 ? LYS A 195 . ? 4_456 ? 10 AC1 6 HOH D . ? HOH A 201 . ? 1_555 ? 11 AC2 8 ARG A 29 ? ARG A 62 . ? 4_456 ? 12 AC2 8 LYS A 55 ? LYS A 88 . ? 1_555 ? 13 AC2 8 ARG A 91 ? ARG A 124 . ? 1_555 ? 14 AC2 8 THR A 93 ? THR A 126 . ? 1_555 ? 15 AC2 8 ARG A 121 ? ARG A 154 . ? 1_555 ? 16 AC2 8 ARG A 123 ? ARG A 156 . ? 1_555 ? 17 AC2 8 HOH D . ? HOH A 221 . ? 4_456 ? 18 AC2 8 HOH D . ? HOH A 225 . ? 1_555 ? # _database_PDB_matrix.entry_id 1VHH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1VHH _atom_sites.fract_transf_matrix[1][1] 0.018622 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012658 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.028249 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # _atom_sites_footnote.id 1 _atom_sites_footnote.text 'CIS PROLINE - PRO 50' # loop_ _atom_type.symbol C H N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 34 ? ? ? A . n A 1 2 ARG 2 35 ? ? ? A . n A 1 3 HIS 3 36 ? ? ? A . n A 1 4 PRO 4 37 ? ? ? A . n A 1 5 LYS 5 38 ? ? ? A . n A 1 6 LYS 6 39 39 LYS LYS A . n A 1 7 LEU 7 40 40 LEU LEU A . n A 1 8 THR 8 41 41 THR THR A . n A 1 9 PRO 9 42 42 PRO PRO A . n A 1 10 LEU 10 43 43 LEU LEU A . n A 1 11 ALA 11 44 44 ALA ALA A . n A 1 12 TYR 12 45 45 TYR TYR A . n A 1 13 LYS 13 46 46 LYS LYS A . n A 1 14 GLN 14 47 47 GLN GLN A . n A 1 15 PHE 15 48 48 PHE PHE A . n A 1 16 ILE 16 49 49 ILE ILE A . n A 1 17 PRO 17 50 50 PRO PRO A . n A 1 18 ASN 18 51 51 ASN ASN A . n A 1 19 VAL 19 52 52 VAL VAL A . n A 1 20 ALA 20 53 53 ALA ALA A . n A 1 21 GLU 21 54 54 GLU GLU A . n A 1 22 LYS 22 55 55 LYS LYS A . n A 1 23 THR 23 56 56 THR THR A . n A 1 24 LEU 24 57 57 LEU LEU A . n A 1 25 GLY 25 58 58 GLY GLY A . n A 1 26 ALA 26 59 59 ALA ALA A . n A 1 27 SER 27 60 60 SER SER A . n A 1 28 GLY 28 61 61 GLY GLY A . n A 1 29 ARG 29 62 62 ARG ARG A . n A 1 30 TYR 30 63 63 TYR TYR A . n A 1 31 GLU 31 64 64 GLU GLU A . n A 1 32 GLY 32 65 65 GLY GLY A . n A 1 33 LYS 33 66 66 LYS LYS A . n A 1 34 ILE 34 67 67 ILE ILE A . n A 1 35 THR 35 68 68 THR THR A . n A 1 36 ARG 36 69 69 ARG ARG A . n A 1 37 ASN 37 70 70 ASN ASN A . n A 1 38 SER 38 71 71 SER SER A . n A 1 39 GLU 39 72 72 GLU GLU A . n A 1 40 ARG 40 73 73 ARG ARG A . n A 1 41 PHE 41 74 74 PHE PHE A . n A 1 42 LYS 42 75 75 LYS LYS A . n A 1 43 GLU 43 76 76 GLU GLU A . n A 1 44 LEU 44 77 77 LEU LEU A . n A 1 45 THR 45 78 78 THR THR A . n A 1 46 PRO 46 79 79 PRO PRO A . n A 1 47 ASN 47 80 80 ASN ASN A . n A 1 48 TYR 48 81 81 TYR TYR A . n A 1 49 ASN 49 82 82 ASN ASN A . n A 1 50 PRO 50 83 83 PRO PRO A . n A 1 51 ASP 51 84 84 ASP ASP A . n A 1 52 ILE 52 85 85 ILE ILE A . n A 1 53 ILE 53 86 86 ILE ILE A . n A 1 54 PHE 54 87 87 PHE PHE A . n A 1 55 LYS 55 88 88 LYS LYS A . n A 1 56 ASP 56 89 89 ASP ASP A . n A 1 57 GLU 57 90 90 GLU GLU A . n A 1 58 GLU 58 91 91 GLU GLU A . n A 1 59 ASN 59 92 92 ASN ASN A . n A 1 60 THR 60 93 93 THR THR A . n A 1 61 GLY 61 94 94 GLY GLY A . n A 1 62 ALA 62 95 95 ALA ALA A . n A 1 63 ASP 63 96 96 ASP ASP A . n A 1 64 ARG 64 97 97 ARG ARG A . n A 1 65 LEU 65 98 98 LEU LEU A . n A 1 66 MET 66 99 99 MET MET A . n A 1 67 THR 67 100 100 THR THR A . n A 1 68 GLN 68 101 101 GLN GLN A . n A 1 69 ARG 69 102 102 ARG ARG A . n A 1 70 CYS 70 103 103 CYS CYS A . n A 1 71 LYS 71 104 104 LYS LYS A . n A 1 72 ASP 72 105 105 ASP ASP A . n A 1 73 LYS 73 106 106 LYS LYS A . n A 1 74 LEU 74 107 107 LEU LEU A . n A 1 75 ASN 75 108 108 ASN ASN A . n A 1 76 ALA 76 109 109 ALA ALA A . n A 1 77 LEU 77 110 110 LEU LEU A . n A 1 78 ALA 78 111 111 ALA ALA A . n A 1 79 ILE 79 112 112 ILE ILE A . n A 1 80 SER 80 113 113 SER SER A . n A 1 81 VAL 81 114 114 VAL VAL A . n A 1 82 MET 82 115 115 MET MET A . n A 1 83 ASN 83 116 116 ASN ASN A . n A 1 84 GLN 84 117 117 GLN GLN A . n A 1 85 TRP 85 118 118 TRP TRP A . n A 1 86 PRO 86 119 119 PRO PRO A . n A 1 87 GLY 87 120 120 GLY GLY A . n A 1 88 VAL 88 121 121 VAL VAL A . n A 1 89 LYS 89 122 122 LYS LYS A . n A 1 90 LEU 90 123 123 LEU LEU A . n A 1 91 ARG 91 124 124 ARG ARG A . n A 1 92 VAL 92 125 125 VAL VAL A . n A 1 93 THR 93 126 126 THR THR A . n A 1 94 GLU 94 127 127 GLU GLU A . n A 1 95 GLY 95 128 128 GLY GLY A . n A 1 96 TRP 96 129 129 TRP TRP A . n A 1 97 ASP 97 130 130 ASP ASP A . n A 1 98 GLU 98 131 131 GLU GLU A . n A 1 99 ASP 99 132 132 ASP ASP A . n A 1 100 GLY 100 133 133 GLY GLY A . n A 1 101 HIS 101 134 134 HIS HIS A . n A 1 102 HIS 102 135 135 HIS HIS A . n A 1 103 SER 103 136 136 SER SER A . n A 1 104 GLU 104 137 137 GLU GLU A . n A 1 105 GLU 105 138 138 GLU GLU A . n A 1 106 SER 106 139 139 SER SER A . n A 1 107 LEU 107 140 140 LEU LEU A . n A 1 108 HIS 108 141 141 HIS HIS A . n A 1 109 TYR 109 142 142 TYR TYR A . n A 1 110 GLU 110 143 143 GLU GLU A . n A 1 111 GLY 111 144 144 GLY GLY A . n A 1 112 ARG 112 145 145 ARG ARG A . n A 1 113 ALA 113 146 146 ALA ALA A . n A 1 114 VAL 114 147 147 VAL VAL A . n A 1 115 ASP 115 148 148 ASP ASP A . n A 1 116 ILE 116 149 149 ILE ILE A . n A 1 117 THR 117 150 150 THR THR A . n A 1 118 THR 118 151 151 THR THR A . n A 1 119 SER 119 152 152 SER SER A . n A 1 120 ASP 120 153 153 ASP ASP A . n A 1 121 ARG 121 154 154 ARG ARG A . n A 1 122 ASP 122 155 155 ASP ASP A . n A 1 123 ARG 123 156 156 ARG ARG A . n A 1 124 SER 124 157 157 SER SER A . n A 1 125 LYS 125 158 158 LYS LYS A . n A 1 126 TYR 126 159 159 TYR TYR A . n A 1 127 GLY 127 160 160 GLY GLY A . n A 1 128 MET 128 161 161 MET MET A . n A 1 129 LEU 129 162 162 LEU LEU A . n A 1 130 ALA 130 163 163 ALA ALA A . n A 1 131 ARG 131 164 164 ARG ARG A . n A 1 132 LEU 132 165 165 LEU LEU A . n A 1 133 ALA 133 166 166 ALA ALA A . n A 1 134 VAL 134 167 167 VAL VAL A . n A 1 135 GLU 135 168 168 GLU GLU A . n A 1 136 ALA 136 169 169 ALA ALA A . n A 1 137 GLY 137 170 170 GLY GLY A . n A 1 138 PHE 138 171 171 PHE PHE A . n A 1 139 ASP 139 172 172 ASP ASP A . n A 1 140 TRP 140 173 173 TRP TRP A . n A 1 141 VAL 141 174 174 VAL VAL A . n A 1 142 TYR 142 175 175 TYR TYR A . n A 1 143 TYR 143 176 176 TYR TYR A . n A 1 144 GLU 144 177 177 GLU GLU A . n A 1 145 SER 145 178 178 SER SER A . n A 1 146 LYS 146 179 179 LYS LYS A . n A 1 147 ALA 147 180 180 ALA ALA A . n A 1 148 HIS 148 181 181 HIS HIS A . n A 1 149 ILE 149 182 182 ILE ILE A . n A 1 150 HIS 150 183 183 HIS HIS A . n A 1 151 CYS 151 184 184 CYS CYS A . n A 1 152 SER 152 185 185 SER SER A . n A 1 153 VAL 153 186 186 VAL VAL A . n A 1 154 LYS 154 187 187 LYS LYS A . n A 1 155 ALA 155 188 188 ALA ALA A . n A 1 156 GLU 156 189 189 GLU GLU A . n A 1 157 ASN 157 190 190 ASN ASN A . n A 1 158 SER 158 191 191 SER SER A . n A 1 159 VAL 159 192 192 VAL VAL A . n A 1 160 ALA 160 193 193 ALA ALA A . n A 1 161 ALA 161 194 194 ALA ALA A . n A 1 162 LYS 162 195 195 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 400 400 ZN ZN A . C 3 SO4 1 401 401 SO4 SO4 A . D 4 HOH 1 201 201 HOH HOH A . D 4 HOH 2 202 202 HOH HOH A . D 4 HOH 3 203 203 HOH HOH A . D 4 HOH 4 204 204 HOH HOH A . D 4 HOH 5 205 205 HOH HOH A . D 4 HOH 6 206 206 HOH HOH A . D 4 HOH 7 207 207 HOH HOH A . D 4 HOH 8 208 208 HOH HOH A . D 4 HOH 9 209 209 HOH HOH A . D 4 HOH 10 210 210 HOH HOH A . D 4 HOH 11 211 211 HOH HOH A . D 4 HOH 12 212 212 HOH HOH A . D 4 HOH 13 213 213 HOH HOH A . D 4 HOH 14 214 214 HOH HOH A . D 4 HOH 15 215 215 HOH HOH A . D 4 HOH 16 216 216 HOH HOH A . D 4 HOH 17 217 217 HOH HOH A . D 4 HOH 18 218 218 HOH HOH A . D 4 HOH 19 219 219 HOH HOH A . D 4 HOH 20 220 220 HOH HOH A . D 4 HOH 21 221 221 HOH HOH A . D 4 HOH 22 222 222 HOH HOH A . D 4 HOH 23 223 223 HOH HOH A . D 4 HOH 24 224 224 HOH HOH A . D 4 HOH 25 225 225 HOH HOH A . D 4 HOH 26 226 226 HOH HOH A . D 4 HOH 27 227 227 HOH HOH A . D 4 HOH 28 228 228 HOH HOH A . D 4 HOH 29 229 229 HOH HOH A . D 4 HOH 30 230 230 HOH HOH A . D 4 HOH 31 231 231 HOH HOH A . D 4 HOH 32 232 232 HOH HOH A . D 4 HOH 33 233 233 HOH HOH A . D 4 HOH 34 234 234 HOH HOH A . D 4 HOH 35 235 235 HOH HOH A . D 4 HOH 36 236 236 HOH HOH A . D 4 HOH 37 237 237 HOH HOH A . D 4 HOH 38 238 238 HOH HOH A . D 4 HOH 39 239 239 HOH HOH A . D 4 HOH 40 240 240 HOH HOH A . D 4 HOH 41 241 241 HOH HOH A . D 4 HOH 42 242 242 HOH HOH A . D 4 HOH 43 243 243 HOH HOH A . D 4 HOH 44 244 244 HOH HOH A . D 4 HOH 45 245 245 HOH HOH A . D 4 HOH 46 246 246 HOH HOH A . D 4 HOH 47 248 248 HOH HOH A . D 4 HOH 48 249 249 HOH HOH A . D 4 HOH 49 251 251 HOH HOH A . D 4 HOH 50 252 252 HOH HOH A . D 4 HOH 51 253 253 HOH HOH A . D 4 HOH 52 254 254 HOH HOH A . D 4 HOH 53 255 255 HOH HOH A . D 4 HOH 54 256 256 HOH HOH A . D 4 HOH 55 257 257 HOH HOH A . D 4 HOH 56 258 258 HOH HOH A . D 4 HOH 57 259 259 HOH HOH A . D 4 HOH 58 260 260 HOH HOH A . D 4 HOH 59 261 261 HOH HOH A . D 4 HOH 60 262 262 HOH HOH A . D 4 HOH 61 264 264 HOH HOH A . D 4 HOH 62 265 265 HOH HOH A . D 4 HOH 63 266 266 HOH HOH A . D 4 HOH 64 267 267 HOH HOH A . D 4 HOH 65 268 268 HOH HOH A . D 4 HOH 66 269 269 HOH HOH A . D 4 HOH 67 270 270 HOH HOH A . D 4 HOH 68 271 271 HOH HOH A . D 4 HOH 69 272 272 HOH HOH A . D 4 HOH 70 273 273 HOH HOH A . D 4 HOH 71 274 274 HOH HOH A . D 4 HOH 72 275 275 HOH HOH A . D 4 HOH 73 276 276 HOH HOH A . D 4 HOH 74 277 277 HOH HOH A . D 4 HOH 75 278 278 HOH HOH A . D 4 HOH 76 279 279 HOH HOH A . D 4 HOH 77 281 281 HOH HOH A . D 4 HOH 78 282 282 HOH HOH A . D 4 HOH 79 283 283 HOH HOH A . D 4 HOH 80 284 284 HOH HOH A . D 4 HOH 81 285 285 HOH HOH A . D 4 HOH 82 286 286 HOH HOH A . D 4 HOH 83 287 287 HOH HOH A . D 4 HOH 84 288 288 HOH HOH A . D 4 HOH 85 289 289 HOH HOH A . D 4 HOH 86 290 290 HOH HOH A . D 4 HOH 87 291 291 HOH HOH A . D 4 HOH 88 292 292 HOH HOH A . D 4 HOH 89 293 293 HOH HOH A . D 4 HOH 90 294 294 HOH HOH A . D 4 HOH 91 295 295 HOH HOH A . D 4 HOH 92 296 296 HOH HOH A . D 4 HOH 93 297 297 HOH HOH A . D 4 HOH 94 298 298 HOH HOH A . D 4 HOH 95 299 299 HOH HOH A . D 4 HOH 96 300 300 HOH HOH A . D 4 HOH 97 301 301 HOH HOH A . D 4 HOH 98 302 302 HOH HOH A . D 4 HOH 99 303 303 HOH HOH A . D 4 HOH 100 304 304 HOH HOH A . D 4 HOH 101 305 305 HOH HOH A . D 4 HOH 102 306 306 HOH HOH A . D 4 HOH 103 307 307 HOH HOH A . D 4 HOH 104 308 308 HOH HOH A . D 4 HOH 105 309 309 HOH HOH A . D 4 HOH 106 310 310 HOH HOH A . D 4 HOH 107 312 312 HOH HOH A . D 4 HOH 108 314 314 HOH HOH A . D 4 HOH 109 315 315 HOH HOH A . D 4 HOH 110 316 316 HOH HOH A . D 4 HOH 111 317 317 HOH HOH A . D 4 HOH 112 319 319 HOH HOH A . D 4 HOH 113 320 320 HOH HOH A . D 4 HOH 114 321 321 HOH HOH A . D 4 HOH 115 322 322 HOH HOH A . D 4 HOH 116 323 323 HOH HOH A . D 4 HOH 117 325 325 HOH HOH A . D 4 HOH 118 327 327 HOH HOH A . D 4 HOH 119 328 328 HOH HOH A . D 4 HOH 120 329 329 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 115 ? A ASP 148 ? 1_555 ZN ? B ZN . ? A ZN 400 ? 1_555 ND1 ? A HIS 150 ? A HIS 183 ? 1_555 112.2 ? 2 OD1 ? A ASP 115 ? A ASP 148 ? 1_555 ZN ? B ZN . ? A ZN 400 ? 1_555 NE2 ? A HIS 108 ? A HIS 141 ? 1_555 106.0 ? 3 ND1 ? A HIS 150 ? A HIS 183 ? 1_555 ZN ? B ZN . ? A ZN 400 ? 1_555 NE2 ? A HIS 108 ? A HIS 141 ? 1_555 112.0 ? 4 OD1 ? A ASP 115 ? A ASP 148 ? 1_555 ZN ? B ZN . ? A ZN 400 ? 1_555 O ? D HOH . ? A HOH 201 ? 1_555 116.3 ? 5 ND1 ? A HIS 150 ? A HIS 183 ? 1_555 ZN ? B ZN . ? A ZN 400 ? 1_555 O ? D HOH . ? A HOH 201 ? 1_555 99.3 ? 6 NE2 ? A HIS 108 ? A HIS 141 ? 1_555 ZN ? B ZN . ? A ZN 400 ? 1_555 O ? D HOH . ? A HOH 201 ? 1_555 111.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1996-01-29 2 'Structure model' 1 1 2008-03-03 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' 3.1 ? 1 X-PLOR refinement 3.1 ? 2 DENZO 'data reduction' . ? 3 X-PLOR phasing 3.1 ? 4 # _pdbx_entry_details.entry_id 1VHH _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ;THE AMINO-TERMINAL DOMAIN OF MURINE SONIC HEDGEHOG WAS EXPRESSED AS A GLUTATHIONE S-TRANSFERASE FUSION PROTEIN USING THE PGEX2T VECTOR. THE FUSION PROTEIN WAS CLEAVED WITH THROMBIN TO RELEASE THE SONIC HEDGEHOG FRAGMENT. ; _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HE2 A HIS 141 ? ? ZN A ZN 400 ? ? 1.12 2 1 HD1 A HIS 183 ? ? ZN A ZN 400 ? ? 1.20 3 1 O A ARG 62 ? ? HH22 A ARG 145 ? ? 1.58 4 1 O A HOH 233 ? ? H1 A HOH 235 ? ? 1.58 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 46 ? ? 75.49 -2.78 2 1 ALA A 59 ? ? -104.31 -118.25 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 34 ? A ARG 1 2 1 Y 1 A ARG 35 ? A ARG 2 3 1 Y 1 A HIS 36 ? A HIS 3 4 1 Y 1 A PRO 37 ? A PRO 4 5 1 Y 1 A LYS 38 ? A LYS 5 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'SULFATE ION' SO4 4 water HOH #